BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144931.17 + phase: 0 /pseudo/partial
         (50 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_O48844 26S proteasome regulatory subunit (RPN2), putat...    49  4e-05
UniRef100_Q6XJG7 26S proteasome subunit RPN2a [Arabidopsis thali...    49  4e-05
UniRef100_Q9MAT0 F13M7.20 protein [Arabidopsis thaliana]               47  1e-04
UniRef100_Q6Z921 Putative proteasome 26S non-ATPase subunit 1 [O...    37  0.11
UniRef100_Q7XPE9 OSJNBa0060N03.12 protein [Oryza sativa]               35  0.40
UniRef100_O74762 26S proteasome regulatory subunit rpn2 [Schizos...    33  2.6
UniRef100_UPI000046C896 UPI000046C896 UniRef100 entry                  32  3.4
UniRef100_UPI0000465A04 UPI0000465A04 UniRef100 entry                  32  3.4
UniRef100_Q7RSV5 Rpn2 gene product-related [Plasmodium yoelii yo...    32  3.4
UniRef100_Q8IKH3 26S proteasome subunit, putative [Plasmodium fa...    32  4.5

>UniRef100_O48844 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis
          thaliana]
          Length = 1004

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 1  MATTLVSSAGGMLAMLNESHISLKIHALSXLN 32
          MAT +VSSAGG+LAMLNE H  LK+HALS LN
Sbjct: 1  MATPMVSSAGGLLAMLNEPHPVLKLHALSNLN 32


>UniRef100_Q6XJG7 26S proteasome subunit RPN2a [Arabidopsis thaliana]
          Length = 1004

 Score = 48.9 bits (115), Expect = 4e-05
 Identities = 24/32 (75%), Positives = 27/32 (84%)

Query: 1  MATTLVSSAGGMLAMLNESHISLKIHALSXLN 32
          MAT +VSSAGG+LAMLNE H  LK+HALS LN
Sbjct: 1  MATPMVSSAGGLLAMLNEPHPVLKLHALSNLN 32


>UniRef100_Q9MAT0 F13M7.20 protein [Arabidopsis thaliana]
          Length = 1001

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 1  MATTLVSSAGGMLAMLNESHISLKIHALSXL 31
          MA  +VSSAGG+LAMLNE H SLK+HALS L
Sbjct: 1  MAAAMVSSAGGLLAMLNEPHPSLKLHALSYL 31


>UniRef100_Q6Z921 Putative proteasome 26S non-ATPase subunit 1 [Oryza sativa]
          Length = 987

 Score = 37.4 bits (85), Expect = 0.11
 Identities = 18/31 (58%), Positives = 22/31 (70%)

Query: 2  ATTLVSSAGGMLAMLNESHISLKIHALSXLN 32
          A  +VSSA G+LAML E    LK+HAL+ LN
Sbjct: 4  AAVMVSSASGLLAMLQEPAAELKLHALANLN 34


>UniRef100_Q7XPE9 OSJNBa0060N03.12 protein [Oryza sativa]
          Length = 925

 Score = 35.4 bits (80), Expect = 0.40
 Identities = 18/31 (58%), Positives = 21/31 (67%)

Query: 2  ATTLVSSAGGMLAMLNESHISLKIHALSXLN 32
          A   VSSA G+LAML E    LK+HAL+ LN
Sbjct: 5  AVATVSSASGILAMLQEPAEELKLHALASLN 35


>UniRef100_O74762 26S proteasome regulatory subunit rpn2 [Schizosaccharomyces
          pombe]
          Length = 965

 Score = 32.7 bits (73), Expect = 2.6
 Identities = 12/26 (46%), Positives = 22/26 (84%)

Query: 3  TTLVSSAGGMLAMLNESHISLKIHAL 28
          T++++SAGG++A+L+E    L++HAL
Sbjct: 9  TSIITSAGGLMALLDEQERELQVHAL 34


>UniRef100_UPI000046C896 UPI000046C896 UniRef100 entry
          Length = 1177

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 15/28 (53%), Positives = 20/28 (70%)

Query: 5  LVSSAGGMLAMLNESHISLKIHALSXLN 32
          +V+SA G++A+LNE   SLKI  L  LN
Sbjct: 12 IVTSASGVIALLNEEDASLKIFGLEKLN 39


>UniRef100_UPI0000465A04 UPI0000465A04 UniRef100 entry
          Length = 1171

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 15/28 (53%), Positives = 20/28 (70%)

Query: 5  LVSSAGGMLAMLNESHISLKIHALSXLN 32
          +V+SA G++A+LNE   SLKI  L  LN
Sbjct: 12 IVTSASGVIALLNEEDASLKIFGLEKLN 39


>UniRef100_Q7RSV5 Rpn2 gene product-related [Plasmodium yoelii yoelii]
          Length = 1232

 Score = 32.3 bits (72), Expect = 3.4
 Identities = 15/28 (53%), Positives = 20/28 (70%)

Query: 5  LVSSAGGMLAMLNESHISLKIHALSXLN 32
          +V+SA G++A+LNE   SLKI  L  LN
Sbjct: 12 IVTSASGVIALLNEEDASLKIFGLEKLN 39


>UniRef100_Q8IKH3 26S proteasome subunit, putative [Plasmodium falciparum]
          Length = 1172

 Score = 32.0 bits (71), Expect = 4.5
 Identities = 14/28 (50%), Positives = 20/28 (71%)

Query: 5  LVSSAGGMLAMLNESHISLKIHALSXLN 32
          +V+SA G++A+LNE   SLK+  L  LN
Sbjct: 12 IVTSASGVIALLNEEETSLKLFGLEKLN 39


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.316    0.123    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,210,216
Number of Sequences: 2790947
Number of extensions: 1398205
Number of successful extensions: 2201
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2191
Number of HSP's gapped (non-prelim): 10
length of query: 50
length of database: 848,049,833
effective HSP length: 26
effective length of query: 24
effective length of database: 775,485,211
effective search space: 18611645064
effective search space used: 18611645064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)