BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144765.5 - phase: 0 /pseudo
(443 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q949K9 Putative polyprotein [Cicer arietinum] 320 4e-86
UniRef100_O64892 Polyprotein [Ananas comosus] 275 2e-72
UniRef100_Q7XYU5 Integrase [Gossypium herbaceum] 273 9e-72
UniRef100_Q8S5I0 Putative retroelement [Oryza sativa] 270 8e-71
UniRef100_Q8SB42 Putative polyprotein [Oryza sativa] 269 1e-70
UniRef100_Q8W1D1 Gag-pol [Zea mays] 268 2e-70
UniRef100_Q8H873 Putative polyprotein [Oryza sativa] 268 2e-70
UniRef100_Q5W682 Putative polyprotein [Oryza sativa] 268 2e-70
UniRef100_Q7XWS2 OSJNBa0091C12.10 protein [Oryza sativa] 268 2e-70
UniRef100_Q7XVX5 OSJNBa0004L19.9 protein [Oryza sativa] 268 2e-70
UniRef100_Q7XK80 OSJNBa0028M15.7 protein [Oryza sativa] 268 2e-70
UniRef100_Q94I07 Putative retroelement [Oryza sativa] 268 2e-70
UniRef100_Q7XP82 OSJNBa0021F22.18 protein [Oryza sativa] 268 2e-70
UniRef100_Q8LLX8 Putative retroelement [Oryza sativa] 268 3e-70
UniRef100_Q7X6S2 OSJNBb0046P18.12 protein [Oryza sativa] 268 3e-70
UniRef100_Q7X693 OSJNBa0006M15.6 protein [Oryza sativa] 268 3e-70
UniRef100_Q94I04 Putative retroelement [Oryza sativa] 268 3e-70
UniRef100_Q8LHG2 Putative retroelement polyprotein [Oryza sativa] 268 3e-70
UniRef100_Q8LM87 Putative retroelement [Oryza sativa] 267 4e-70
UniRef100_Q7XUB1 OSJNBb0032E06.10 protein [Oryza sativa] 267 4e-70
>UniRef100_Q949K9 Putative polyprotein [Cicer arietinum]
Length = 655
Score = 320 bits (821), Expect = 4e-86
Identities = 158/269 (58%), Positives = 200/269 (73%), Gaps = 2/269 (0%)
Query: 1 NFGLNYHPDKAKVVADALSRKTLHMSAL-MVKEFELLEQFRDLSLVCELSSQSVQLGMLK 59
+F L YHP KA VVADALSR+++ +S+L M ++ EL E FRDL L E + ++ GM+K
Sbjct: 211 DFTLQYHPGKANVVADALSRRSVSVSSLIMARQQELWEAFRDLHLNVEFAPGILKFGMIK 270
Query: 60 INSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLI 119
I+S L I +Q DV + + Q + ++FK+ VLR GRIC+P+ ++K I
Sbjct: 271 ISSGLLEDIANSQD-DVLIQEKRNLIVQGKTTEFKIGADNVLRCNGRICVPEITAMRKTI 329
Query: 120 LEEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLT 179
LEE HKS LSIH GATKMYQDL++ +WW G+KK VA +V CLTCQK+KVEHQRPAG+L
Sbjct: 330 LEEAHKSKLSIHPGATKMYQDLRQNYWWPGMKKHVAEYVSTCLTCQKAKVEHQRPAGMLQ 389
Query: 180 PLDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYI 239
PLD+PEWKWDSISMDF++ LP T R +DSIWV+VDRLTKSAHF+P+ +Y V QL EIYI
Sbjct: 390 PLDIPEWKWDSISMDFITGLPKTRRKNDSIWVIVDRLTKSAHFLPVRTTYKVDQLTEIYI 449
Query: 240 QNIVKLHGVPSSIVSDRDPRFTSRFWRSL 268
IV+LHGVPSSIVSDRDP+FTS FW +L
Sbjct: 450 AEIVRLHGVPSSIVSDRDPKFTSHFWGAL 478
>UniRef100_O64892 Polyprotein [Ananas comosus]
Length = 871
Score = 275 bits (702), Expect = 2e-72
Identities = 135/265 (50%), Positives = 180/265 (66%), Gaps = 1/265 (0%)
Query: 6 YHPDKAKVVADALSRKTLHMSAL-MVKEFELLEQFRDLSLVCELSSQSVQLGMLKINSDF 64
YHP KA VVADALSRK++ A+ +V + L+EQ + L L ++L L +
Sbjct: 413 YHPGKANVVADALSRKSMENLAMHVVTQPRLIEQMKRLELEIVTPDTPMRLMTLVVQPTL 472
Query: 65 LGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLILEEGH 124
L I+E Q DV+ + DF +D G++RFRGRIC+P + +K+ IL+E H
Sbjct: 473 LDRIKEKQASDVELQKIKGKMVDGCTGDFTLDGDGLMRFRGRICVPADSGIKEDILQEAH 532
Query: 125 KSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTPLDVP 184
++ +IH G TKMY+DLK L+WW G+KKDV FV CLTCQ+ K EH+ PAG L L +P
Sbjct: 533 RAPYAIHPGGTKMYKDLKLLYWWPGIKKDVGEFVAKCLTCQQVKAEHRVPAGKLQSLPIP 592
Query: 185 EWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQNIVK 244
WKW+ I+MDFV+ LP + GHD+IWV+VDRLTKSAHFIPI+ ++ +LA++Y+ IV+
Sbjct: 593 VWKWEKITMDFVTGLPRSQAGHDAIWVIVDRLTKSAHFIPIHTTWTGERLAQVYLDEIVR 652
Query: 245 LHGVPSSIVSDRDPRFTSRFWRSLQ 269
LHGVP+SIVSDRD RF S FWRSLQ
Sbjct: 653 LHGVPTSIVSDRDTRFVSHFWRSLQ 677
>UniRef100_Q7XYU5 Integrase [Gossypium herbaceum]
Length = 350
Score = 273 bits (697), Expect = 9e-72
Identities = 132/266 (49%), Positives = 178/266 (66%), Gaps = 13/266 (4%)
Query: 4 LNYHPDKAKVVADALSRKTLHMSALMVKEFELLEQFRDLSLVCELSSQSVQLGMLKINSD 63
++YHP KA +VADALSRK+L R +++ + +V + LK
Sbjct: 83 IDYHPGKANMVADALSRKSLFA-------------LRAMNVYLSILPDNVLVAELKAKPL 129
Query: 64 FLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLILEEG 123
IREAQ+VD + + +ES+F++D+ LRFR R+C+P N EL +IL E
Sbjct: 130 LTHQIREAQKVDEELLAKRAECVLNKESEFQIDDDDCLRFRSRLCVPKNSELILIILNEA 189
Query: 124 HKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTPLDV 183
H S ++IH G+TKMY DLK+ FWW G+K+D+ FV CL CQ+ K EHQ P+GLL P+ +
Sbjct: 190 HCSRMAIHPGSTKMYNDLKRRFWWHGMKRDIFDFVSRCLICQQVKAEHQVPSGLLQPITI 249
Query: 184 PEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQNIV 243
PEWKWD ++MDFVS LP ++ D+IWVVVDRLTKSAHFIP+ + + +LAE+Y+ IV
Sbjct: 250 PEWKWDRVTMDFVSGLPLSASKKDAIWVVVDRLTKSAHFIPVRTDFSLDKLAELYVSQIV 309
Query: 244 KLHGVPSSIVSDRDPRFTSRFWRSLQ 269
+LHGVP S+VSDRDPRFTSRFW+ LQ
Sbjct: 310 RLHGVPISVVSDRDPRFTSRFWKKLQ 335
>UniRef100_Q8S5I0 Putative retroelement [Oryza sativa]
Length = 1728
Score = 270 bits (689), Expect = 8e-71
Identities = 141/269 (52%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVK--EFELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + + L L+
Sbjct: 1261 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPLELNQQMEALNL--SIVGRGF-LAALEA 1316
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 1317 KPTLLDQIREAQKNDPDMRGLLKNMKQGKATGFTEDEHGTLWNGNRVCVPDNRELKQLIL 1376
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLKK +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1377 QEAHESPYSIHPGSTKMYLDLKKKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1436
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1437 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1496
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1497 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1525
>UniRef100_Q8SB42 Putative polyprotein [Oryza sativa]
Length = 816
Score = 269 bits (688), Expect = 1e-70
Identities = 141/269 (52%), Positives = 177/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + S+ L L+
Sbjct: 272 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPPELNQQMEALNL--SIVSRGF-LATLEA 327
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 328 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLIL 387
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 388 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 447
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 448 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 507
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 508 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 536
>UniRef100_Q8W1D1 Gag-pol [Zea mays]
Length = 1470
Score = 268 bits (686), Expect = 2e-70
Identities = 141/272 (51%), Positives = 178/272 (64%), Gaps = 16/272 (5%)
Query: 4 LNYHPDKAKVVADALSRK------TLH-MSALMVKEFELLEQFRDLSLVCELSSQSVQLG 56
+ YHP KA VVADALSRK T H MS + E E L +L + +V+
Sbjct: 935 IQYHPGKANVVADALSRKGQVNNITTHLMSQELCWEMERL----NLGFL-----NNVEAT 985
Query: 57 MLKINSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELK 116
++++ S IR+ Q+ D K ++ + + DF DEQG + F+ RIC+P+ E L+
Sbjct: 986 VMEVESTLEEEIRKGQESDEKIKEIKALIGLGKAPDFTEDEQGTIWFKKRICVPEIEHLR 1045
Query: 117 KLILEEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAG 176
+LIL E H S SIH G+TKMYQDLK+ +WW GLK+DVA V C CQ+ K EHQRPAG
Sbjct: 1046 QLILREAHDSAYSIHPGSTKMYQDLKEKYWWYGLKRDVATHVALCDVCQRVKAEHQRPAG 1105
Query: 177 LLTPLDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAE 236
LL PL VPEWKW+ ISMDF+ LP T G+DSIWV+VDRLTK AHFIP+ +Y AQLAE
Sbjct: 1106 LLQPLKVPEWKWEEISMDFIVGLPRTRDGYDSIWVIVDRLTKVAHFIPVKTTYSGAQLAE 1165
Query: 237 IYIQNIVKLHGVPSSIVSDRDPRFTSRFWRSL 268
+Y+ IV LHGVP IVSDR +FTSRFW+ L
Sbjct: 1166 LYMSRIVCLHGVPKKIVSDRGTQFTSRFWKRL 1197
>UniRef100_Q8H873 Putative polyprotein [Oryza sativa]
Length = 1820
Score = 268 bits (686), Expect = 2e-70
Identities = 141/269 (52%), Positives = 177/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + S+ L L+
Sbjct: 1276 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPPELNQQMEALNL--SIVSRGF-LAALEA 1331
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 1332 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGKRVCVPDNRELKQLIL 1391
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1392 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1451
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1452 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1511
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1512 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1540
>UniRef100_Q5W682 Putative polyprotein [Oryza sativa]
Length = 1772
Score = 268 bits (686), Expect = 2e-70
Identities = 140/269 (52%), Positives = 177/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V++ EL +Q L+L + + L L+
Sbjct: 1228 GIHYHPGKANVVADALSRKS-HCNTLNVRDIPPELNQQMEALNL--SIVGRGF-LAALEA 1283
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 1284 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGKRVCVPDNRELKQLIL 1343
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1344 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1403
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1404 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1463
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1464 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1492
>UniRef100_Q7XWS2 OSJNBa0091C12.10 protein [Oryza sativa]
Length = 1461
Score = 268 bits (686), Expect = 2e-70
Identities = 140/269 (52%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVK--EFELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + + L L+
Sbjct: 917 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPLELSQQMEALNL--SIVGRGF-LAALEA 972
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 973 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLIL 1032
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1033 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1092
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1093 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1152
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1153 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1181
>UniRef100_Q7XVX5 OSJNBa0004L19.9 protein [Oryza sativa]
Length = 1821
Score = 268 bits (686), Expect = 2e-70
Identities = 140/269 (52%), Positives = 177/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L ++ EL +Q L+L + S+ L L+
Sbjct: 1277 GIHYHPGKANVVADALSRKS-HCNTLNIRGIPPELNQQMAALNL--SIVSRGF-LAALEA 1332
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 1333 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLIL 1392
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1393 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1452
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1453 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1512
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1513 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1541
>UniRef100_Q7XK80 OSJNBa0028M15.7 protein [Oryza sativa]
Length = 1822
Score = 268 bits (686), Expect = 2e-70
Identities = 140/269 (52%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVK--EFELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + + L L+
Sbjct: 1278 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPLELSQQMEALNL--SIVGRGF-LAALEA 1333
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 1334 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLIL 1393
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1394 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1453
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1454 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1513
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1514 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1542
>UniRef100_Q94I07 Putative retroelement [Oryza sativa]
Length = 2447
Score = 268 bits (686), Expect = 2e-70
Identities = 141/269 (52%), Positives = 178/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + S+ L L+
Sbjct: 1903 GIHYHPGKANVVADALSRKS-HCNTLGVRGIPPELNQQMEALNL--SIVSRGF-LATLEA 1958
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R R+C+PD ELK+LIL
Sbjct: 1959 KPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFIEDEHGTLWNRNRVCVPDVRELKQLIL 2018
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 2019 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 2078
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 2079 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 2138
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR+ +FTS FW+ LQ
Sbjct: 2139 RIVSLHGVPKKIVSDRESQFTSHFWKKLQ 2167
Score = 164 bits (416), Expect = 4e-39
Identities = 96/265 (36%), Positives = 140/265 (52%), Gaps = 32/265 (12%)
Query: 4 LNYHPDKAKVVADALSRKTLHMSALMVKEFELLEQFRDLSLVCELSSQSVQLGMLKINSD 63
+ + K ++ADALSR+ ++ L K F L
Sbjct: 1112 IKHKKGKENIIADALSRRYTLLTQLDYKIFGL---------------------------- 1143
Query: 64 FLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLILEEG 123
+I++ D F D+++ + V G + ++CIP + ++ L+L+E
Sbjct: 1144 --ETIKDQYAHDADFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASS-VRLLLLQEA 1200
Query: 124 HKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTPLDV 183
H L H GA K + L F+W +++DV RFV C TCQK+K P GL PL V
Sbjct: 1201 HGGGLMGHFGAKKTHDILASHFFWPQMRRDVGRFVARCATCQKAK-SRLHPHGLYMPLPV 1259
Query: 184 PEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQNIV 243
P W+ ISMDFV LP T RG DSI+VVVDR +K AHFIP + + + +A+++ + IV
Sbjct: 1260 PTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADLFFREIV 1319
Query: 244 KLHGVPSSIVSDRDPRFTSRFWRSL 268
+LHGVP++IVSDRD +F S FWR+L
Sbjct: 1320 RLHGVPNTIVSDRDTKFLSHFWRTL 1344
>UniRef100_Q7XP82 OSJNBa0021F22.18 protein [Oryza sativa]
Length = 599
Score = 268 bits (685), Expect = 2e-70
Identities = 140/269 (52%), Positives = 177/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALS+K+ H + L V+ EL +Q L+L + + L L+
Sbjct: 55 GIHYHPGKANVVADALSQKS-HCNTLNVRGIPPELSQQMEALNL--SIVGRGF-LAALEA 110
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 111 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLIL 170
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ KVEHQRPAGLL P
Sbjct: 171 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKVEHQRPAGLLQP 230
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 231 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 290
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 291 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 319
>UniRef100_Q8LLX8 Putative retroelement [Oryza sativa]
Length = 1825
Score = 268 bits (684), Expect = 3e-70
Identities = 140/269 (52%), Positives = 177/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + S+ L L+
Sbjct: 1281 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPPELNQQMEALNL--SIVSRGF-LAALEA 1336
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F +E G L R+C+PDN ELK+LIL
Sbjct: 1337 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEEEHGTLWNGNRVCVPDNRELKQLIL 1396
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1397 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1456
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1457 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1516
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1517 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1545
>UniRef100_Q7X6S2 OSJNBb0046P18.12 protein [Oryza sativa]
Length = 1469
Score = 268 bits (684), Expect = 3e-70
Identities = 141/269 (52%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + S+ L L+
Sbjct: 925 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPPELNQQMEALNL--SIVSRGF-LAALEA 980
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 981 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGTRVCVPDNRELKQLIL 1040
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1041 QEAHESPYSIHPGSTKMYLDLKDKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1100
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1101 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1160
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1161 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1189
>UniRef100_Q7X693 OSJNBa0006M15.6 protein [Oryza sativa]
Length = 1635
Score = 268 bits (684), Expect = 3e-70
Identities = 140/269 (52%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + + L L+
Sbjct: 1152 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPPELNQQMEALNL--SIVGRGF-LAALEA 1207
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 1208 KPTLLDQIREAQKNDPDMRGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDNRELKQLIL 1267
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1268 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1327
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1328 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1387
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1388 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1416
>UniRef100_Q94I04 Putative retroelement [Oryza sativa]
Length = 1862
Score = 268 bits (684), Expect = 3e-70
Identities = 140/269 (52%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + V L L+
Sbjct: 1318 GIHYHPSKANVVADALSRKS-HCNTLNVRGIPPELSQQMEALNL--SIVGHGV-LAALEA 1373
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PD+ ELK+LIL
Sbjct: 1374 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLIL 1433
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1434 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1493
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1494 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1553
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1554 RIVSLHGVPKRIVSDRGSQFTSHFWKKLQ 1582
>UniRef100_Q8LHG2 Putative retroelement polyprotein [Oryza sativa]
Length = 1796
Score = 268 bits (684), Expect = 3e-70
Identities = 140/269 (52%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + + L L+
Sbjct: 1252 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPPELNQQMEALNL--SIVGRGF-LAALEA 1307
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PDN ELK+LIL
Sbjct: 1308 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFAEDEHGTLWNGNRVCVPDNRELKQLIL 1367
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1368 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1427
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1428 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1487
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1488 RIVSLHGVPKKIVSDRGSQFTSHFWKKLQ 1516
>UniRef100_Q8LM87 Putative retroelement [Oryza sativa]
Length = 1821
Score = 267 bits (683), Expect = 4e-70
Identities = 140/269 (52%), Positives = 176/269 (65%), Gaps = 6/269 (2%)
Query: 3 GLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSLVCELSSQSVQLGMLKI 60
G++YHP KA VVADALSRK+ H + L V+ EL +Q L+L + V L L+
Sbjct: 1277 GIHYHPGKANVVADALSRKS-HCNTLNVRGIPPELSQQMEALNL--SIVGHGV-LAALEA 1332
Query: 61 NSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKKLIL 120
L IREAQ+ D L+ Q + + F DE G L R+C+PD+ ELK+LIL
Sbjct: 1333 KPTLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLIL 1392
Query: 121 EEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGLLTP 180
+E H+S SIH G+TKMY DLK+ +WW +K+++A FV C CQ+ K EHQRPAGLL P
Sbjct: 1393 QEAHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQP 1452
Query: 181 LDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEIYIQ 240
L VPEWKWD I MDF++ LP T G+DSIWVVVDRLTK A FIP+ +Y +LAE+Y
Sbjct: 1453 LQVPEWKWDEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFA 1512
Query: 241 NIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
IV LHGVP IVSDR +FTS FW+ LQ
Sbjct: 1513 RIVSLHGVPKRIVSDRGSQFTSHFWKKLQ 1541
>UniRef100_Q7XUB1 OSJNBb0032E06.10 protein [Oryza sativa]
Length = 2120
Score = 267 bits (683), Expect = 4e-70
Identities = 133/272 (48%), Positives = 182/272 (66%), Gaps = 8/272 (2%)
Query: 1 NFGLNYHPDKAKVVADALSRKTLHMSALMVKEF--ELLEQFRDLSL-VCELSSQSVQLGM 57
+ ++YHP KA VVADALSRK+ + +AL ++ EL ++F L++ + EL +
Sbjct: 1215 DMSIHYHPGKANVVADALSRKS-YCTALCIEGMCEELRQEFEHLNVGIVELGF----VAA 1269
Query: 58 LKINSDFLGSIREAQQVDVKFVDLMVVSNQAEESDFKVDEQGVLRFRGRICIPDNEELKK 117
L+ + +R AQ D + +L + DF DE G + R+C+PD++ELK
Sbjct: 1270 LEARPTLVDQVRAAQANDSEIAELKKNMRVGKARDFHEDEHGTIWLGERLCVPDDKELKD 1329
Query: 118 LILEEGHKSNLSIHLGATKMYQDLKKLFWWSGLKKDVARFVYACLTCQKSKVEHQRPAGL 177
LIL E H++ SIH G+TKMYQDLK+ FWW +++++A FV C CQ+ K EHQRPAGL
Sbjct: 1330 LILTEAHQTQYSIHPGSTKMYQDLKERFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGL 1389
Query: 178 LTPLDVPEWKWDSISMDFVSSLPNTSRGHDSIWVVVDRLTKSAHFIPINISYPVAQLAEI 237
L PL +PEWKW+ I MDF++ LP TS GHDSIWVVVDRLTK AHFIP++ +Y +LAE+
Sbjct: 1390 LQPLQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLAEL 1449
Query: 238 YIQNIVKLHGVPSSIVSDRDPRFTSRFWRSLQ 269
Y+ I+ LHGVP IVSDR +FTS+FW+ LQ
Sbjct: 1450 YLSRIMCLHGVPKKIVSDRGSQFTSKFWQKLQ 1481
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.341 0.148 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 620,439,479
Number of Sequences: 2790947
Number of extensions: 23245327
Number of successful extensions: 84656
Number of sequences better than 10.0: 1792
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 913
Number of HSP's that attempted gapping in prelim test: 81783
Number of HSP's gapped (non-prelim): 2324
length of query: 443
length of database: 848,049,833
effective HSP length: 130
effective length of query: 313
effective length of database: 485,226,723
effective search space: 151875964299
effective search space used: 151875964299
T: 11
A: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.9 bits)
S2: 76 (33.9 bits)
Medicago: description of AC144765.5