BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144724.6 + phase: 0 
         (1523 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8LMY8 Putative polyprotein [Oryza sativa]                 1005  0.0
UniRef100_Q7XBC6 Putative copia-type pol polyprotein [Zea mays]       736  0.0
UniRef100_O24587 Pol protein [Zea mays]                               714  0.0
UniRef100_Q852C7 Putative gag-pol polyprotein [Oryza sativa]          708  0.0
UniRef100_Q8W0X4 Putative pol protein [Zea mays]                      707  0.0
UniRef100_Q8H7T1 Putative Zea mays retrotransposon Opie-2 [Oryza...   707  0.0
UniRef100_Q7XPI7 OSJNBb0004A17.2 protein [Oryza sativa]               707  0.0
UniRef100_Q8H6I8 Putative gag-pol polyprotein [Zea mays]              704  0.0
UniRef100_Q9SDD5 Similar to copia-type pol polyprotein [Oryza sa...   697  0.0
UniRef100_Q7XET2 Hypothetical protein [Oryza sativa]                  696  0.0
UniRef100_Q850V9 Putative polyprotein [Oryza sativa]                  693  0.0
UniRef100_Q84VI2 Gag-pol polyprotein [Glycine max]                    684  0.0
UniRef100_Q7XLK0 OSJNBa0009K15.10 protein [Oryza sativa]              684  0.0
UniRef100_Q84VH8 Gag-pol polyprotein [Glycine max]                    682  0.0
UniRef100_Q84VI4 Gag-pol polyprotein [Glycine max]                    682  0.0
UniRef100_Q8VY36 Opie2a pol [Zea mays]                                676  0.0
UniRef100_Q84VH6 Gag-pol polyprotein [Glycine max]                    676  0.0
UniRef100_Q84MV2 Putative gag-pol polyprotein [Oryza sativa]          675  0.0
UniRef100_Q8VY34 Opie2 pol [Zea mays]                                 673  0.0
UniRef100_Q60DR2 Putative polyprotein [Oryza sativa]                  672  0.0

>UniRef100_Q8LMY8 Putative polyprotein [Oryza sativa]
          Length = 1584

 Score = 1005 bits (2598), Expect = 0.0
 Identities = 608/1607 (37%), Positives = 883/1607 (54%), Gaps = 134/1607 (8%)

Query: 15   RPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKAKSAWSTDEKAQV 74
            + P+F+G+NY  WK KM   L++    +W+++  G         A+        D +  +
Sbjct: 10   KAPIFNGTNYSTWKIKMSTHLKAMSFHIWSIVYVGF--------AITGTPLTEIDHR-NL 60

Query: 75   LLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRIDIGVRKFEVF 134
             LN++A   L  +L+ EE +RV     A  +W+ L   HEGTS  K+ ++     ++E F
Sbjct: 61   QLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQYETF 120

Query: 135  EMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSMWRPMVTAITQAKDLK 194
             M  +E++++MY R   IVN+++ LG  Y+  +  +K+LR LP  +  +VT +  + D+ 
Sbjct: 121  YMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVTMLINS-DMS 179

Query: 195  SMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQEPQELEEVHEEEA 254
             M    L+G +  +++     K +++    + K     + V+D+   +  E+ E    + 
Sbjct: 180  RMTPASLLGKINTNDMYKLKKKEMEEASP-SKKCIALQAEVEDKSKSKVNEVNE----DL 234

Query: 255  EDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADK--SQVTCYGCNKTGHFKNECPD 312
            E+E+ L+++R   ++ RR + R +   +N       +K  S + C+   + GHF ++CP 
Sbjct: 235  EEEMILLARRFNDLLERRKE-RGRGSNSNRRRNRRLNKTLSNLRCFEYGEKGHFASKCPS 293

Query: 313  -----------------IKKVQRKPPFKKKAMI-TWDDMEESDSQEDADTDMGLMAQSDD 354
                             + K  +K   K +A I  WD  EES +   ++ + G  A S  
Sbjct: 294  KDDDGDKSSKKKSGGYKLMKKLKKEGKKIEAFIGEWDSNEESSASSGSEEEGGDDASSKK 353

Query: 355  EEEVI--IYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYDES 412
            ++ V+  I +  SL+  L             L  +  S +  LS+ + + +     Y+E 
Sbjct: 354  KKMVVVAIKEAPSLFAPL------------CLMAKGSSKVTSLSDSESDDDCDDVSYEE- 400

Query: 413  RKTIKILQDSHFDMSEKQ----REINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGF 468
               + + ++ H   SEK+    + +N+    +  +  E++  N  L    E LK+     
Sbjct: 401  --LVSMFEELHA-YSEKEIVKFKALNKDYASLDVLYEELKTSNERLTISHEKLKEAHDNL 457

Query: 469  IKSTETFQNI-------------------VGSQNKSTKKSGLGFKDPSKIIGSFVPKAKI 509
            + +T+   +I                   V S + ST    L   D      S      I
Sbjct: 458  LSTTQHGAHIDVGISCDLLDDSATCHIAHVASSSISTSCDDL--MDMPSPCSSSSSCVSI 515

Query: 510  RVKCCFCDKYGHNESVCHVKKK----FIKQNNLN--LSSERSHLNRSESSQKAEKAKKTC 563
                   +     E V  + K     F  +N L+  LS +R  LN+       +K KK  
Sbjct: 516  CDASLVVENNEFKEQVAKLNKSLERCFKGKNTLDKILSEQRCILNKEGLGFIPKKGKKPS 575

Query: 564  FYCN---KSDHKRQNVTFRKD----LLEELTFKDPTLHG-LDSGCSRHMTGDRDCFLTFE 615
             +     K + +   V    D    L   + ++    H  LDSGC++HMTGDR  F TFE
Sbjct: 576  HHATHFVKRNGRLMMVALLLDMWVPLYSVVNYRTGGSHWVLDSGCTQHMTGDRTMFTTFE 635

Query: 616  K--KDGGLVTFGNNDKGKIRGKGTIGNLNSARIENVQYVEGLKHNLLSISQLCDSGFEVI 673
                +   VTFG+N  GK+ G G I   N   IENV  V+ L  NLLS+ Q+CD G    
Sbjct: 636  VGGNEQEKVTFGDNSNGKVIGLGKIAISNDLSIENVSLVKSLNFNLLSVPQICDLGLSCA 695

Query: 674  FKPNICEVRQTSSNKLFFSGSRRKNLYVLELNDMPA--ESCFMSLEKDKWIWHKRAGHIS 731
            F P    V         + G R  NLY+++ N   A  ++C ++     W+WH+R  H+ 
Sbjct: 696  FFPQEVIVSSLLDKSCVYKGFRYGNLYLVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVG 755

Query: 732  MKTIAKLSQLDLVRGLPKISFEKDRICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLF 791
            M  ++KLS+ DLV GL  + FEKD++C AC  GKQV  S  T   +ST + LELLH+DLF
Sbjct: 756  MNQLSKLSKRDLVVGLKDVKFEKDKLCSACQAGKQVACSHPTKSIMSTSRLLELLHMDLF 815

Query: 792  GPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRS 851
            GP    S+ G  +  VIVD++SR+TWV FL  K    E F+ F KR QNE    ++ +RS
Sbjct: 816  GPTTYKSIGGNSHCLVIVDEYSRYTWVFFLHDKSIVAELFKKFAKRAQNEFSCTLVKIRS 875

Query: 852  DHGGEFENASFKTFFDENVFGCYCYILNNKEKLGKFDPKSDKAIFL--------GYSTTS 903
            D+G EF+N + + + D+           + ++ G  + K+   I +        GY++ S
Sbjct: 876  DNGSEFKNTNIEDYCDDLGIKHELSATYSPQQNGVVERKNHTLIEMARTMLDKYGYASNS 935

Query: 904  KGYRVYNLKTQTVEISMHIIFDEYDEHS--------------------------KPKENE 937
            K YRVYN     VE +  + FDE +                             KP E E
Sbjct: 936  KAYRVYNKNKGIVEETADVQFDETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVE 995

Query: 938  DTEVPTLQNVPVQNTENTVEKEDDQNAQDQSFQSPPRSWRMVG-DHPTDQIIGSTTDGVR 996
            D    + Q+ P  +  ++  + + +  + Q    PPR    +  DHP DQ++G    GV+
Sbjct: 996  DKPSTSTQDEPSTSASSSQAQVEVEEEKAQDPPMPPRIHTALSKDHPIDQVLGDINKGVQ 1055

Query: 997  TRLSFQD--NNMAMISQMEPKSINEAIIDDSWIKAMKEELSQFERNKVWNLVPNNQDKTI 1054
            TR        + + +S ++PK ++E + D  W+ AM EEL+ F RNKVW LV   +D  +
Sbjct: 1056 TRSRVASICEHYSFVSCLKPKHVDEVLCDPDWMNAMHEELNNFARNKVWILVERPRDHNV 1115

Query: 1055 IGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHK 1114
            IGT+W+FRNK DE G VVRNKARLVAQG+ Q EG+D+ ETFAPVARLEAIRILLA+A+  
Sbjct: 1116 IGTKWIFRNKQDENGLVVRNKARLVAQGFTQVEGLDFGETFAPVARLEAIRILLAFASCF 1175

Query: 1115 SIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRL 1174
             IKLFQMDVKSAFLNG + E V+V QPPGF + + PNHV+KL+KALYGLKQAPRAWY+RL
Sbjct: 1176 DIKLFQMDVKSAFLNGEIAELVFVEQPPGFEDPKNPNHVYKLSKALYGLKQAPRAWYERL 1235

Query: 1175 STFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEM 1234
              FL+   F  GK++TTLF K    D  + Q+YVDDIIFG+T    C+EF ++M  EFEM
Sbjct: 1236 RYFLLSKDFKIGKVNTTLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEM 1295

Query: 1235 SMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTPMHPSSSLDKDESG 1294
            SM+GEL FFLGLQIKQ  +G F+SQ KY+KD+LK++ + +AK + TPM  +  LD D+ G
Sbjct: 1296 SMIGELNFFLGLQIKQLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNGHLDLDKGG 1355

Query: 1295 KSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDL 1354
            K +  K YR MIGSLLYLTASRPDI+F+V +CARFQ   KE HL AVKRI RYL  ++ +
Sbjct: 1356 KPVDLKLYRSMIGSLLYLTASRPDIMFSVCMCARFQAAPKECHLVAVKRILRYLKHSSTI 1415

Query: 1355 GLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIALSTTEAE 1414
            GLWY KG+ F LV Y D+DYA  KV+RKSTSGSCQ LG++L+ WS +KQN++ALST EAE
Sbjct: 1416 GLWYPKGAKFKLVGYSDSDYASCKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAE 1475

Query: 1415 YVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFI 1474
            YVSA SCC+Q+LW++  L DY + +T  P+ CDN  AI ++ NP+QHSR+KHI+I+HHF+
Sbjct: 1476 YVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDRAIKIANNPVQHSRTKHIDIRHHFL 1535

Query: 1475 RDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNFLKEKLLIMKNPN 1521
            RDHV K +I +S + TE+QLADIFTKPL E RF  L+ +L ++   N
Sbjct: 1536 RDHVTKCDIVISHIRTEDQLADIFTKPLNETRFCKLRNELNVIDFSN 1582


>UniRef100_Q7XBC6 Putative copia-type pol polyprotein [Zea mays]
          Length = 1760

 Score =  736 bits (1899), Expect = 0.0
 Identities = 423/1016 (41%), Positives = 591/1016 (57%), Gaps = 153/1016 (15%)

Query: 596  LDSGCSRHMTGDRDCFLTFEKKDGG--LVTFGNNDKGKIRGKGTIGNLNSARIENVQYVE 653
            LDSGC+ HMT ++  F ++EK       +TF + ++G                       
Sbjct: 805  LDSGCTNHMTREKRMFSSYEKNQDPQRAITFEDGNQG----------------------- 841

Query: 654  GLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSGSRRKNLYVLELNDMPAESCF 713
                                       V + S + + F G     LY+++ +    ++C 
Sbjct: 842  -------------------------VTVFRRSDDSIAFKGVLEGQLYLVDFDRAELDTCL 876

Query: 714  MSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDRI---CEACVKG--KQVK 768
            ++     W+WH+R  H+ MK + KL + + + GL  + FEKDR     +  +KG  ++ +
Sbjct: 877  IAKTNMGWLWHRRLAHVGMKNLHKLLKGEHILGLTNVHFEKDREKSQTQETLKGFLRRAQ 936

Query: 769  SSFKT-IEFISTQKPLELLHIDLFGPVQTASL--------TGKRYGFV-----IVDDFSR 814
            + F   I+ I +    E  +  + G ++   +        T ++ G V      + D +R
Sbjct: 937  NEFGLRIKKIRSDNGTEFKNSQIEGFLEEEGIKHEFSSPYTPQQNGVVERKNRTLLDMAR 996

Query: 815  FTWVLFLKHKDESF-EAFQNFC--------KRVQNEKGYNIITVRSDHGGEFENASFKTF 865
             T +   K  D  + EA    C         R+  +  Y ++T      G+  N S+   
Sbjct: 997  -TMLDEYKTPDRFWAEAVNTACYAINRLYLHRILKKTSYELLT------GKKPNISYF-- 1047

Query: 866  FDENVFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFD 925
                VFG  C+IL  + +  KF PK+ +   LGY   ++ YRV+N  T  VE+S  ++FD
Sbjct: 1048 ---RVFGSKCFILVKRGRKSKFAPKTVEGFLLGYDPNTRAYRVFNKSTGLVEVSCDVVFD 1104

Query: 926  E----------YDEHSK-----------------PKENEDTEVPTLQNVPVQNTENTVEK 958
            E           DE                    PKE+E  E+P+ Q+ P  +T+ +   
Sbjct: 1105 ETNGSQVEQVDLDETGNDEAPCVALRNMSIGDVCPKESE--ELPSAQDQPSSSTQASPPT 1162

Query: 959  EDDQNAQ-----DQSFQSP-------------------------PRSWRMVG-DHPTDQI 987
            +++  AQ     DQ+ + P                         PR  + +  DHP D I
Sbjct: 1163 QNEDEAQVDEVEDQANEPPQDDGIDQGGDANDQDKEDEEQRPPHPRVHQAIQQDHPVDTI 1222

Query: 988  IGSTTDGV--RTRLSFQDNNMAMISQMEPKSINEAIIDDSWIKAMKEELSQFERNKVWNL 1045
            +G    GV  R+R++    + + +S +EP  + EA+ D  W+ AM+EEL+ F RN+VW+L
Sbjct: 1223 LGDIHKGVTTRSRVAHFCEHYSFVSSIEPHRVEEALQDSDWVVAMQEELNNFTRNEVWHL 1282

Query: 1046 VPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIR 1105
            VP   ++ ++GT+WVFRNK DE G V RNKARLVA+GY+Q EG+D+ ET+APVARLE+IR
Sbjct: 1283 VPR-PNQNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYSQVEGLDFGETYAPVARLESIR 1341

Query: 1106 ILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQ 1165
            ILLAYA +   KL+QMDVKSAFLNG + EEVYV QPPGF + E PNHV+KL+KALYGLKQ
Sbjct: 1342 ILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQPPGFEDSEYPNHVYKLSKALYGLKQ 1401

Query: 1166 APRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFS 1225
            APRAWY+ L  FLI NGF  GK D TLF KT   DL + Q+YVDDIIFG+T    CEEFS
Sbjct: 1402 APRAWYECLRDFLIANGFKVGKADPTLFTKTLENDLFVCQIYVDDIIFGSTNESTCEEFS 1461

Query: 1226 NLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTPMHPS 1285
             +M  +FEMSMMGEL +FLG Q+KQ   G FISQ KY +DIL K+ M +AK + TPM  +
Sbjct: 1462 RIMTQKFEMSMMGELKYFLGFQVKQLQEGTFISQTKYTQDILSKFGMKDAKPIKTPMGTN 1521

Query: 1286 SSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIF 1345
              LD D  GKS+ +K YR MIGSLLYL ASRPDI+ +V +CARFQ+  KESHLTAVKRI 
Sbjct: 1522 GHLDLDTGGKSVDQKVYRSMIGSLLYLCASRPDIMLSVCMCARFQSDPKESHLTAVKRIL 1581

Query: 1346 RYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNT 1405
            RYL  T   GLWY +GS+FDL+ Y DAD+AG K+ RKSTSG+CQFLG++L+ W+ +KQN+
Sbjct: 1582 RYLAYTPKFGLWYPRGSTFDLLGYSDADWAGCKINRKSTSGTCQFLGRSLVSWASKKQNS 1641

Query: 1406 IALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSK 1465
            +ALST EAEY++A  CC+Q+LW+R  L DY  + T VP+ CDN SAI ++ NP++HSR+K
Sbjct: 1642 VALSTAEAEYIAAGHCCAQLLWMRQTLRDYGYKLTKVPLLCDNESAIKMADNPVEHSRTK 1701

Query: 1466 HIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNFLKEKLLIMKNPN 1521
            HI I++HF+RDH QK +I +S+++T++QLADIFTKPL E  F  L+ +L I+ + N
Sbjct: 1702 HIAIRYHFLRDHQQKGDIEISYINTKDQLADIFTKPLDEQTFTKLRHELNILDSRN 1757



 Score =  108 bits (269), Expect = 2e-21
 Identities = 108/442 (24%), Positives = 196/442 (43%), Gaps = 62/442 (14%)

Query: 66  WSTDEKAQVL-LNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRI 124
           +  DE AQ+   NS+A   L  +L+ EE  +V    +AK +WD LK  HEG    K T+ 
Sbjct: 112 YDEDEVAQIEHFNSQATTILLASLSREEYNKVQGLKSAKEIWDVLKTAHEGDELTKITKR 171

Query: 125 DIGVRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKA-YSTHDRIRKILRCLPSMWRPM 183
           +    +   F + + E    MY R  T+VN++R+LG   +  H+ ++ ILR L  +    
Sbjct: 172 ETIEGELGRFRLRKGEEPQHMYNRLKTLVNQVRNLGSVKWDDHEMVKVILRSLIFLNPTQ 231

Query: 184 VTAITQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQE- 242
           V  I        M  E++IG+  + E +++G + + ++       +Q  +    E+ +E 
Sbjct: 232 VQLIRGNPRYTKMTPEEVIGNFVSFECMIEGSRKINELDDATTSEAQPVAFKATEEKKEE 291

Query: 243 --PQELEEVHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGC 300
             P        +   +E+AL+ K  ++++ +R              K    +S+  CY C
Sbjct: 292 ATPSRQPIDASKLDNEEMALVIKSFRQILKQRRG------------KDYKSRSKKVCYKC 339

Query: 301 NKTGHFKNECP--------DIKKVQRKPP---FKKK-----AMITWD-DMEESDSQEDAD 343
            K GHF  +CP        D KK +RK     +KKK         WD D   SDS +D D
Sbjct: 340 GKPGHFIAKCPISSDSDRGDDKKGRRKEKKKYYKKKGGDAHVCREWDSDDSSSDSSDDED 399

Query: 344 -----TDMGLM--------AQSDDEEEVIIYKTDSLYK--------DLENKIDSLLYDSN 382
                   GL+          + D ++ +  K+ + Y+        D E+ + SL  + N
Sbjct: 400 AANIAVTKGLLFPNVGHKCLMAKDGKKKVKSKSSTKYESSSDDNASDEEDNLRSLFANLN 459

Query: 383 FLTNRCHSLIKELSEIKEEKEILQNKYD----ESRKTIKILQDSHFDMSEKQREINRKQK 438
                   L + +S I E+ ++L ++ D    E++K +K+ ++++    EK  +++ +  
Sbjct: 460 IAQK--EKLNELVSAIHEKDDLLDSQEDLLIKENKKHVKV-KNAYSLQVEKCEKLSSELS 516

Query: 439 GIMSVPSEVQKENILLKKEVET 460
               +   ++ EN  L  +V++
Sbjct: 517 TCREMIDNLRNENASLNAKVDS 538


>UniRef100_O24587 Pol protein [Zea mays]
          Length = 1068

 Score =  714 bits (1842), Expect = 0.0
 Identities = 371/734 (50%), Positives = 492/734 (66%), Gaps = 57/734 (7%)

Query: 834  FCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENVFGCYCYILNNKEKLGKFDPKSDK 893
            +  R+     Y ++T      G   N S+       VFG  CYIL  K +  KF PK+ +
Sbjct: 348  YLHRILKNTSYELLT------GNKPNVSYF-----RVFGSKCYILVKKGRNSKFAPKAVE 396

Query: 894  AIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE--------------YDEHS-------- 931
               LGY + +K YRV+N  +  VE+S  ++FDE               DE          
Sbjct: 397  GFLLGYDSNTKAYRVFNKSSGLVEVSGDVVFDETNGSPREQVVDCDDVDEEDIPTAAIRT 456

Query: 932  ------KPKENEDTEVP---TLQNVPVQNTENTVEKE--------DDQNAQDQSFQSPPR 974
                  +P+E ++ E P   T+ + P Q+ E   ++E        DD   ++++  +PP 
Sbjct: 457  MAIGEVRPQEQDEREQPSPSTMVHPPTQDDEQVHQQEVCDQGGAQDDHVLEEEAQPAPPT 516

Query: 975  SWRMV--GDHPTDQIIGSTTDGVRTR---LSFQDNNMAMISQMEPKSINEAIIDDSWIKA 1029
              R +   DHP DQI+G  + GV TR   ++F ++N + +S +EP  + EA++D  W+ A
Sbjct: 517  QVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHN-SFVSSIEPFRVEEALLDPDWVLA 575

Query: 1030 MKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGI 1089
            M+EEL+ F+RN+VW LVP  + + ++GT+WVFRNK DE G V RNKARLVA+GY Q  G+
Sbjct: 576  MQEELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQDERGVVTRNKARLVAKGYAQVAGL 634

Query: 1090 DYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEK 1149
            D++ETFAPVARLE+IRILLAYAAH S +L+QMDVKSAFLNG + EEVYV QPPGF ++  
Sbjct: 635  DFEETFAPVARLESIRILLAYAAHHSFRLYQMDVKSAFLNGPIKEEVYVEQPPGFEDERY 694

Query: 1150 PNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVD 1209
            P+HV KL+KALYGLKQAPRAWY+ L  FLI N F  GK D TLF KT + DL + Q+YVD
Sbjct: 695  PDHVCKLSKALYGLKQAPRAWYECLRDFLIANAFKVGKADPTLFTKTCDGDLFVCQIYVD 754

Query: 1210 DIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKK 1269
            DIIFG+T  K CEEFS +M  +FEMSMMGEL +FLG Q+KQ  +G FISQ KY +D+LK+
Sbjct: 755  DIIFGSTNQKSCEEFSRVMTQKFEMSMMGELNYFLGFQVKQLKDGTFISQTKYTQDLLKR 814

Query: 1270 YKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARF 1329
            + M +AK   TPM      D ++ GKS+ +K YR MIGSLLYL ASRPDI+ +V +CARF
Sbjct: 815  FGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSMIGSLLYLCASRPDIMLSVCMCARF 874

Query: 1330 QTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQ 1389
            Q+  KE HL AVKRI RYLV T   GLWY KGS+FDLV Y D+DYAG KV+RKSTSG+CQ
Sbjct: 875  QSDPKECHLVAVKRILRYLVATPCFGLWYPKGSTFDLVGYSDSDYAGCKVDRKSTSGTCQ 934

Query: 1390 FLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNT 1449
            FLG++L+ W+ +KQ ++ALST EAEYV+A  CC+Q+LW+R  L D+    + VP+ CDN 
Sbjct: 935  FLGRSLVSWNSKKQTSVALSTAEAEYVAAGQCCAQLLWMRQTLRDFGYNLSKVPLLCDNE 994

Query: 1450 SAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNF 1509
            SAI +++NP++HSR+KHI+I+HHF+RDH QK +I +  V TENQLADIFTKPL E  F  
Sbjct: 995  SAIRMAENPVEHSRTKHIDIRHHFLRDHQQKGDIEVFHVSTENQLADIFTKPLDEKTFCR 1054

Query: 1510 LKEKLLIMKNPNKD 1523
            L+ +L ++ + N D
Sbjct: 1055 LRSELNVLDSRNLD 1068



 Score =  223 bits (568), Expect = 4e-56
 Identities = 116/277 (41%), Positives = 165/277 (58%), Gaps = 4/277 (1%)

Query: 596 LDSGCSRHMTGDRDCFLTFEK-KDG-GLVTFGNNDKGKIRGKGTIGNLNSARIENVQYVE 653
           +DSGC+ HMTG++  F ++ K KD    + FG+ ++GK++G G I   N   I NV  VE
Sbjct: 13  IDSGCTNHMTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISNEHSISNVFLVE 72

Query: 654 GLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSGSRRKNLYVLELNDMPA--ES 711
            L +NLLS+SQLC+ G+  +F      V +     L F G     LY+++     A  ++
Sbjct: 73  SLGYNLLSVSQLCNMGYNCLFTNIDVSVFRRCDGSLAFKGVLDGKLYLVDFAKEEAGLDA 132

Query: 712 CFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDRICEACVKGKQVKSSF 771
           C ++     W+WH+R  H+ MK + KL + + V GL  + FEKDR C AC  GKQV  S 
Sbjct: 133 CLIAKTSMGWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFEKDRPCAACQAGKQVGGSH 192

Query: 772 KTIEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAF 831
            T   ++T +PLE+LH+DLFGPV   S+ G +YG VIVDDFSRFTWV FL+ K E+    
Sbjct: 193 HTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQEKSETQGTL 252

Query: 832 QNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDE 868
           + F +R QNE    +  +RSD+G EF+N   + F +E
Sbjct: 253 KRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEE 289


>UniRef100_Q852C7 Putative gag-pol polyprotein [Oryza sativa]
          Length = 1969

 Score =  708 bits (1828), Expect = 0.0
 Identities = 358/673 (53%), Positives = 465/673 (68%), Gaps = 29/673 (4%)

Query: 870  VFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYDE 929
            VFGC C++L +   L KF+ +S   IFLGY+T S+ YRVY L T  +  +  + FDE   
Sbjct: 1115 VFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFDEASP 1173

Query: 930  HSKPK-----------------ENEDTEVPTLQNVP-VQNTENTVEKEDDQNAQ------ 965
             ++P+                 +++D+  P L + P VQ T +        +A       
Sbjct: 1174 GARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSPSTTSPSGDAPTTSSSA 1233

Query: 966  ----DQSFQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQMEPKSINEAI 1021
                D     P     +   HP D +IG   + V    S++  N A ++  EPK++  A+
Sbjct: 1234 AEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYELVNSAFVASFEPKNVCHAL 1293

Query: 1022 IDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQ 1081
             D++W+ AM EEL  FERNKVW+LV       +IGT+WVF+NKL E+G +VRNKARLVAQ
Sbjct: 1294 SDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQ 1353

Query: 1082 GYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQP 1141
            G+ Q EG+D++ETFAPVARLEAIRILLA+AA K  KLFQMDVKSAFLNG + EEVYV QP
Sbjct: 1354 GFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQP 1413

Query: 1142 PGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDL 1201
            PGF N + PNHVFKL KALYGLKQAPRAWY+RL TFL++NGF  G +D TLF      D 
Sbjct: 1414 PGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1473

Query: 1202 LIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEK 1261
            L+VQ+YVDDIIFG +   +  +FS++M  EFEMSMMGEL FFLGLQIKQ   GIF+ Q K
Sbjct: 1474 LLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTK 1533

Query: 1262 YVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVF 1321
            Y K++LKK+ M + K ++TPM  +SSL  DE G+ + ++EYR MIGSLLYLTASRPDI F
Sbjct: 1534 YSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHF 1593

Query: 1322 AVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVER 1381
            +V LCARFQ   + SH  AVKRIFRY+  T + G+WY   S+  + A+ DAD+AG K++R
Sbjct: 1594 SVCLCARFQASPRTSHRQAVKRIFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDR 1653

Query: 1382 KSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTS 1441
            KSTSG+C FLG +L+ WS RKQ+++A ST EAEYV+AAS CSQ+LW+ + L+DY L ++ 
Sbjct: 1654 KSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSG 1713

Query: 1442 VPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKP 1501
            VP+ CDNTSAIN++KNP+QHSR+KHIEI++HF+RD+V+K  I L FV++E QLADIFTKP
Sbjct: 1714 VPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKP 1773

Query: 1502 LVEDRFNFLKEKL 1514
            L   RF FL+ +L
Sbjct: 1774 LDRSRFEFLRSEL 1786



 Score =  221 bits (563), Expect = 1e-55
 Identities = 156/539 (28%), Positives = 258/539 (46%), Gaps = 48/539 (8%)

Query: 366  LYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYD--ESRKTIKILQDSH 423
            L  +L+   +  ++D       C  L  +  E++++  +L+ K D  ES  T + +  S 
Sbjct: 507  LEMELKELKEKFVHDRIGRCENCPILTSDNDELRQQVAMLKTKNDLLESFATKEPIHSSC 566

Query: 424  FDMSEKQREINRKQKGIMSVPS-EVQKENILLKKEVETLKKDLTGFIKSTETFQ------ 476
             + +  + E+   +  I S+ S +     I LK ++E+ KK+ +   +S E F       
Sbjct: 567  ANCAILETELKDAKTVIDSIKSIDSCSSCISLKVDLESAKKENSYLQQSLERFAQGKKKL 626

Query: 477  NIVGSQNK-STKKSGLGFK-------DPSKIIGSFVPKAKIRVKCCFCDKYGHNESVCHV 528
            N++  Q+K S    G+G+           +I+G      ++  K       G   +    
Sbjct: 627  NMILDQSKVSINNQGIGYDFAESLRIGTHEILGVTDGMIELAQKPITFKSAGFIGNTSSS 686

Query: 529  KKKFIKQNNLNLSSERS--------------HLNRSESSQKAEKAKKTCFYCNKSDHKRQ 574
              K  +   + ++S+                H      ++  EK K  C YC K+ H   
Sbjct: 687  TPKTSEPKMVPMTSKSKPVELPRPKNPKQVEHKQNQRQTKPVEKTKYECTYCGKAGHLDF 746

Query: 575  NVTFRKDLLEELTFKDPTLHGLDSGCSRHMTGDRDCFLTFEKKDGG-LVTFGNNDKGKIR 633
             V      L            +DSGCSRHMTG+   F +  +  G   +TFG+   G++ 
Sbjct: 747  GVGRSNSWL------------VDSGCSRHMTGEAKWFTSLTRASGDETITFGDASSGRVM 794

Query: 634  GKGTIGNLNSARIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSG 693
             KGTI   +   +++V  V  LK+NLLS+SQLCD   EV FK +   V   S + +F   
Sbjct: 795  AKGTIKVNDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPVF-DI 853

Query: 694  SRRKNLYVLELNDM---PAESCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKI 750
            SR   ++    +     P+     S  +D + WH+R GHI    ++++S +DL+RGLPK+
Sbjct: 854  SRVGRVFFANFDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKL 913

Query: 751  SFEKDRICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVD 810
              +KD +C  C  GK   SS K +  + T  P +LLH+D  GP +  S+ GK Y  V+VD
Sbjct: 914  KVQKDLVCAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVD 973

Query: 811  DFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDEN 869
            DFSR++WV FL+ K+E+F  FQ+  + +  E    +  +RSD+G EF+N++F++F D +
Sbjct: 974  DFSRYSWVYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSS 1032



 Score =  141 bits (356), Expect = 1e-31
 Identities = 149/620 (24%), Positives = 263/620 (42%), Gaps = 86/620 (13%)

Query: 13  SNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKAKSAWSTDEKA 72
           S +P +FDG N+  WK +ME +L+SQ +++W  + +   VP + +         +    A
Sbjct: 6   SAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITPANMA 57

Query: 73  QVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRIDIGVRKFE 132
           QV  N +AR  +   ++  E  RV    +A  +W  L   HEG + ++  R +   ++++
Sbjct: 58  QVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHKEYQ 117

Query: 133 VFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLP-SMWRPMVTAITQAK 191
            FEM   E+ID  + RF  I++++RS+GK +S +D  R +L CL   +W   VT+IT++ 
Sbjct: 118 RFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITESA 177

Query: 192 DLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQEPQELEEVH- 250
            L  + ++ L   L+ HE+ +   K +K    L    S  TSS D   V     L  +H 
Sbjct: 178 PLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAALHS 237

Query: 251 ------EEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTG 304
                 E+  ED+LAL +++  R    +N   +K  KTN             C+ C +  
Sbjct: 238 VTEEQLEKIPEDDLALFARKFSRAY--KNVRDRKRGKTN---------EPFVCFECGEPN 286

Query: 305 HFKNECPDIKKVQRKPPFK-------------KKAMITWDDMEESDSQEDADTDMGLMAQ 351
           H +  CP +KK   K   K             KKA+       E     D D+D      
Sbjct: 287 HKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSD------ 340

Query: 352 SDDEEEVIIYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYDE 411
            DD++E    K D  +  +       L ++    N C   +++  +  E  E+  +  D 
Sbjct: 341 -DDDQE----KGDKDFSGM-----CCLANNEDFINLCLMALEDKDDSSEHPEVCLD--DI 388

Query: 412 SRKTIKILQDSHFDMSEKQREINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGFIKS 471
                 +  DS  D      E+++++   + +  E+  +    K ++E LK +  G    
Sbjct: 389 PSLDGSLCDDSCSDNDSVDDELSKERMAHLMI--EISDKYRSSKYKIEKLKSENDGMALE 446

Query: 472 TETFQNIVGSQNK-STKKSGLG----FKDPSK--IIGSFVPKAKIRVKCCFCDKYGHNES 524
               ++++  ++  ST  S L      KD  K   +G+  P +     C  C +   +  
Sbjct: 447 IARLRSMIPEEDTCSTCASYLSEINLLKDKLKSCALGAGNP-SSASAACSTCYEMKVDMG 505

Query: 525 VCHVKKKFIKQNNLNLSSERSHLNRSESSQKAEKAKKTCFYCNKSDHKRQNVTFRK---D 581
           +  ++ K +K+  ++       + R E+              + +D  RQ V   K   D
Sbjct: 506 LLEMELKELKEKFVH-----DRIGRCENCP---------ILTSDNDELRQQVAMLKTKND 551

Query: 582 LLEELTFKDPTLHGLDSGCS 601
           LLE    K+P +H   + C+
Sbjct: 552 LLESFATKEP-IHSSCANCA 570


>UniRef100_Q8W0X4 Putative pol protein [Zea mays]
          Length = 1657

 Score =  707 bits (1826), Expect = 0.0
 Identities = 360/697 (51%), Positives = 476/697 (67%), Gaps = 44/697 (6%)

Query: 870  VFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE--- 926
            VFG  CYIL  K +  KF PK+ +   LGY + +K YRV+N  +  VE+S  ++FDE   
Sbjct: 962  VFGSKCYILVKKGRNSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNG 1021

Query: 927  -----------YDEHS--------------KPKENEDTEVP---TLQNVPVQNTENTVEK 958
                        DE                +P+E ++ + P   T+ + P ++ E   + 
Sbjct: 1022 SPREQVVDCDDVDEEDVPTAAIRTMAIGEVRPQEQDERDQPSSSTMVHPPTEDDEQVPQV 1081

Query: 959  E--------DDQNAQDQSFQSPPRSWRMV--GDHPTDQIIGSTTDGVRTRLSFQD--NNM 1006
            E        DDQ  ++++  +PP   R +   DHP DQI+G  + GV TR    +   + 
Sbjct: 1082 EALDQGGAQDDQVMEEEAQPAPPTQVRAMIQRDHPVDQILGDISKGVTTRSRLVNFCEHY 1141

Query: 1007 AMISQMEPKSINEAIIDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLD 1066
            + +S +EP  + EA++D  W+ AM+EEL+ F+RN+VW LVP  + + ++GT+WVFRNK D
Sbjct: 1142 SFVSSIEPFRVEEALLDPDWVLAMQEELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQD 1200

Query: 1067 EEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSA 1126
            E G V RNKARLVA+GY Q  G+D++ETFAPVARLE+IRILLAYAAH S +L+QMDVKSA
Sbjct: 1201 EHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLESIRILLAYAAHHSFRLYQMDVKSA 1260

Query: 1127 FLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRG 1186
            FLNG + EEVYV QPPGF ++  P+HV KL+KALYGLKQAPRAWY+ L  FL+ N F  G
Sbjct: 1261 FLNGPIKEEVYVEQPPGFEDERYPDHVCKLSKALYGLKQAPRAWYECLRDFLLANAFKVG 1320

Query: 1187 KIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGL 1246
            K D TLF KT + DL + Q+YVDDIIFG+T  K CEEFS +M  +FEMSMMGEL +FLG 
Sbjct: 1321 KADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQKSCEEFSRVMTQKFEMSMMGELNYFLGF 1380

Query: 1247 QIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMI 1306
            Q+KQ  +G FISQ KY +D+LK++ M +AK   TPM      D ++ GKS+ +K YR MI
Sbjct: 1381 QVKQLKDGTFISQTKYTQDLLKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSMI 1440

Query: 1307 GSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDL 1366
            GSLLYL ASRPDI+ +V +CARFQ+  KE HL AVKRI RYLV T   GLWY KGS+FDL
Sbjct: 1441 GSLLYLCASRPDIMLSVCMCARFQSDPKECHLVAVKRILRYLVATPCFGLWYPKGSTFDL 1500

Query: 1367 VAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQIL 1426
            V Y D+DYAG KV+RKSTSG+CQFLG++L+ W+ +KQ ++ALST EAEYV+A  CC+Q+L
Sbjct: 1501 VGYSDSDYAGCKVDRKSTSGTCQFLGRSLVSWNSKKQTSVALSTAEAEYVAAGQCCAQLL 1560

Query: 1427 WVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALS 1486
            W+R  L D+    + VP+ CDN S I +++NP++HSR+KHI+I+HHF+RDH QK +I + 
Sbjct: 1561 WMRQTLRDFGYNLSKVPLLCDNESDIRMAENPVEHSRTKHIDIRHHFLRDHQQKGDIEVF 1620

Query: 1487 FVDTENQLADIFTKPLVEDRFNFLKEKLLIMKNPNKD 1523
             V TENQLADIFTKPL E  F  L+ +L ++ + N D
Sbjct: 1621 HVSTENQLADIFTKPLDEKTFCRLRSELNVIDSRNLD 1657



 Score =  124 bits (312), Expect = 2e-26
 Identities = 116/471 (24%), Positives = 209/471 (43%), Gaps = 57/471 (12%)

Query: 15  RPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKAKSAWSTDEKAQV 74
           +PP FDG +Y FW  KM   L S    +W ++ NG    ++    +  +         Q+
Sbjct: 99  KPPHFDGEDYGFWSHKMRSHLFSLHPSIWEIVENGMKFDSSDSPMLINE---------QI 149

Query: 75  LLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRIDIGVRKFEVF 134
             N++A   L  +L  EE  +V    NAK +WDTLKI HEG      T++++   +   F
Sbjct: 150 HRNAQATTVLLASLCREEYNKVSGLDNAKQIWDTLKISHEGNDVTMLTKMELVEGELGRF 209

Query: 135 EMSENETIDEMYARFTTIVNEMRSLGKA-YSTHDRIRKILRCLPSMWRPMVTAITQAKDL 193
            M   E   + Y R  T+VN++RS G   ++ HD +R +LR    +   +V  I +    
Sbjct: 210 AMIRGEEPTQTYNRLKTLVNKIRSYGSTRWTDHDVVRLMLRSFTVLDPHLVNNIRENPRY 269

Query: 194 KSMNLEDLIGSLRAHEVVLQGDK--------PVKKVRTLALKASQQTSSVDDEDVQEPQE 245
             M+ E+++G   +  ++++  +        P+ + + +ALKAS+   ++       P +
Sbjct: 270 TKMSPEEILGKFVSGRMMIKEARYVDDALNGPIHEPQPIALKASRSKEAL-------PSK 322

Query: 246 LEEVHEEEAED-ELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTG 304
           + ++      D E+ALI KR +  +    + RK+ P      KT+  K + +C+ C K G
Sbjct: 323 VAQIEAAGLNDEEMALIIKRFKTAL----RGRKEHPN-----KTKT-KGKRSCFKCGKIG 372

Query: 305 HFKNECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGLMAQSDDEEEVIIYKTD 364
           HF   CPD    Q K   K      W + +++  +   +  +G    SD           
Sbjct: 373 HFIANCPDNDSDQEKKSGK------W-EKKKNYKKAKGEAHIGKEWDSD---------CS 416

Query: 365 SLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYDESRKTIKILQDSHF 424
           S   D E    +    S    N  H+ +      KE+K   +N    S    +   +   
Sbjct: 417 SSDSDNEGLAATAFNKSTLFPNERHTCLM----AKEKKVCTRNSTYASSSEDESSDEDEV 472

Query: 425 DMSEKQREINR-KQKGIMSVPSEVQKENILLKKEVETLKKDLTGFIKSTET 474
           D S   + ++R K   I  +   + ++NILL+K+ ++L ++   F+++ ++
Sbjct: 473 DYSCLFKGLDRSKIDKINELIDALNEKNILLEKQEDSLYEEHDKFVEAQKS 523



 Score = 38.1 bits (87), Expect = 2.1
 Identities = 17/47 (36%), Positives = 26/47 (55%)

Query: 822 KHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDE 868
           K K E+    + F +R QNE    +  +RSD+G EF+N   + F +E
Sbjct: 832 KEKSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEEFLEE 878


>UniRef100_Q8H7T1 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
          Length = 2145

 Score =  707 bits (1825), Expect = 0.0
 Identities = 357/673 (53%), Positives = 465/673 (69%), Gaps = 29/673 (4%)

Query: 870  VFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYDE 929
            VFGC C++L +   L KF+ +S   IFLGY+T S+ YRVY L T  +  +  + FDE   
Sbjct: 1115 VFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFDEASP 1173

Query: 930  HSKPK-----------------ENEDTEVPTLQNVP-VQNTENTVEKEDDQNAQ------ 965
             ++P+                 +++D+  P L + P VQ T +        +A       
Sbjct: 1174 GARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSPSTTSPSGDAPTTSSSA 1233

Query: 966  ----DQSFQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQMEPKSINEAI 1021
                D     P     +   HP D +IG   + V    S++  N A ++  EPK++  A+
Sbjct: 1234 AEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYELVNSAFVASFEPKNVCHAL 1293

Query: 1022 IDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQ 1081
             D++W+ AM EEL  FERNKVW+LV       +IGT+WVF+NKL E+G +VRNKARLVAQ
Sbjct: 1294 SDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQ 1353

Query: 1082 GYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQP 1141
            G+ Q EG+D++ETFAPVARLEAIRILLA+AA K  KLFQMDVKSAFLNG + EEVYV QP
Sbjct: 1354 GFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQP 1413

Query: 1142 PGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDL 1201
            PGF N + PNHVFKL KALYGLKQAPRAWY+RL TFL++NGF  G +D TLF      D 
Sbjct: 1414 PGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1473

Query: 1202 LIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEK 1261
            L+VQ+YVDDIIFG +   +  +FS++M  EFEMSMMGEL FFLGLQIKQ   GIF+ Q K
Sbjct: 1474 LLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTK 1533

Query: 1262 YVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVF 1321
            Y K++LKK+ M + K ++TPM  +SSL  DE G+ + ++EYR MIGSLLYLTASRPDI F
Sbjct: 1534 YSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHF 1593

Query: 1322 AVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVER 1381
            +V LCARFQ   + SH  AVKR+FRY+  T + G+WY   S+  + A+ DAD+AG K++R
Sbjct: 1594 SVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDR 1653

Query: 1382 KSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTS 1441
            KSTSG+C FLG +L+ WS RKQ+++A ST EAEYV+AAS CSQ+LW+ + L+DY L ++ 
Sbjct: 1654 KSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSG 1713

Query: 1442 VPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKP 1501
            VP+ CDNTSAIN++KNP+QHSR+KHIEI++HF+RD+V+K  I L FV++E QLADIFTKP
Sbjct: 1714 VPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKP 1773

Query: 1502 LVEDRFNFLKEKL 1514
            L   RF FL+ +L
Sbjct: 1774 LDRSRFEFLRSEL 1786



 Score =  218 bits (554), Expect = 1e-54
 Identities = 155/539 (28%), Positives = 256/539 (46%), Gaps = 48/539 (8%)

Query: 366  LYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYD--ESRKTIKILQDSH 423
            L  +L+   +  ++D       C  L  +  E++++  +L+ K D  ES  T + +  S 
Sbjct: 507  LEMELKELKEKFVHDRIGRCENCPILTSDNDELRQQVAMLRTKNDLLESFATKEPIHSSC 566

Query: 424  FDMSEKQREINRKQKGIMSVPS-EVQKENILLKKEVETLKKDLTGFIKSTETFQ------ 476
             + +  + E+   +  I S+ S +     I LK ++E+ KK+ +   +S E F       
Sbjct: 567  ANCAILETELKDAKTVIDSIKSIDSCSSCISLKVDLESAKKENSYLQQSLERFAQGKKKL 626

Query: 477  NIVGSQNK-STKKSGLGFK-------DPSKIIGSFVPKAKIRVKCCFCDKYGHNESVCHV 528
            N++  Q+K S    G+G+           +I+G      ++  K       G   +    
Sbjct: 627  NMILDQSKVSINNQGIGYDFAESLRIGTHEILGVTDGMIELAQKPITFKSAGFIGNTSSS 686

Query: 529  KKKFIKQNNLNLSSERS--------------HLNRSESSQKAEKAKKTCFYCNKSDHKRQ 574
              K  +   + ++S+                H      ++  EK K  C YC K+ H   
Sbjct: 687  TPKTSEPKMVPMTSKSKPVELPRPKNPKQVEHKQNQRQTKPVEKTKYECTYCGKAGHLDF 746

Query: 575  NVTFRKDLLEELTFKDPTLHGLDSGCSRHMTGDRDCFLTFEKKDGG-LVTFGNNDKGKIR 633
             V      L            +DSGCSRHMTG+   F +  +      +TFG+   G++ 
Sbjct: 747  GVGRSNSWL------------VDSGCSRHMTGEAKWFTSLTRASSDETITFGDASSGRVM 794

Query: 634  GKGTIGNLNSARIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSG 693
             KGTI   +   +++V  V  LK+NLLS+SQLCD   EV FK +   V   S + +F   
Sbjct: 795  AKGTIKVNDKFMLKDVALVSKLKYNLLSVSQLCDENLEVRFKKDRSRVLDASESPVF-DI 853

Query: 694  SRRKNLYVLELNDM---PAESCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKI 750
            SR   ++    +     P+     S  +D + WH+R GHI    ++++S +DL+RGLPK+
Sbjct: 854  SRVGRVFFANFDSSAPGPSRCLIASENRDLFFWHRRLGHIGFDHLSRISGMDLIRGLPKL 913

Query: 751  SFEKDRICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVD 810
               KD +C  C  GK   SS K +  + T  P +LLH+D  GP +  S+ GK Y  V+VD
Sbjct: 914  KVPKDLVCAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMDTVGPARVQSVGGKWYVLVVVD 973

Query: 811  DFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDEN 869
            DFSR++WV FL+ K+E+F  FQ+  + +  E    +  +RSD+G EF+N++F++F D +
Sbjct: 974  DFSRYSWVYFLESKEETFGFFQSLARSLALEFPGALRAIRSDNGSEFKNSAFESFCDSS 1032



 Score =  141 bits (355), Expect = 2e-31
 Identities = 148/620 (23%), Positives = 263/620 (41%), Gaps = 86/620 (13%)

Query: 13  SNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKAKSAWSTDEKA 72
           S +P +FDG N+  WK +ME +L+SQ +++W  + +   VP + +         +    A
Sbjct: 6   SAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITPANMA 57

Query: 73  QVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRIDIGVRKFE 132
           QV  N +AR  +   ++  E  RV    +A  +W  L   HEG + ++  R +   ++++
Sbjct: 58  QVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHKEYQ 117

Query: 133 VFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLP-SMWRPMVTAITQAK 191
            FEM   E+ID  + RF  I++++RS+GK +S +D  R +L CL   +W   VT+IT++ 
Sbjct: 118 RFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITESA 177

Query: 192 DLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQEPQELEEVH- 250
            L  + ++ L   L+ HE+ +   K +K    L    S  TSS D   V     L  +H 
Sbjct: 178 PLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAALHS 237

Query: 251 ------EEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTG 304
                 E+  ED+LAL +++  R    +N   +K  KTN             C+ C +  
Sbjct: 238 VTEEQLEKIPEDDLALFARKFSRAY--KNVRDRKRGKTN---------EPFVCFECGEPN 286

Query: 305 HFKNECPDIKKVQRKPPFK-------------KKAMITWDDMEESDSQEDADTDMGLMAQ 351
           H +  CP +KK   K   K             KKA+       E     D D+D      
Sbjct: 287 HKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSD------ 340

Query: 352 SDDEEEVIIYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYDE 411
            DD++E    K D  +  +       L ++    N C   +++  +  E  E+  +  D 
Sbjct: 341 -DDDQE----KGDKDFSGM-----CCLANNEDFINLCLMALEDKDDSSEHPEVCLD--DI 388

Query: 412 SRKTIKILQDSHFDMSEKQREINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGFIKS 471
                 +  DS  D      E+++++   + +  E+  +    K ++E LK +  G    
Sbjct: 389 PSLDGSLCDDSCSDNDSVDDELSKERMAHLMI--EISDKYRSSKYKIEKLKSENDGMALE 446

Query: 472 TETFQNIVGSQNK-STKKSGLG----FKDPSK--IIGSFVPKAKIRVKCCFCDKYGHNES 524
               ++++  ++  ST  S L      KD  K   +G+  P +     C  C +   +  
Sbjct: 447 IARLRSMIPEEDTCSTCASYLSEINLLKDKLKSCALGAGNP-SSASAACSTCYEMKVDMG 505

Query: 525 VCHVKKKFIKQNNLNLSSERSHLNRSESSQKAEKAKKTCFYCNKSDHKRQNVTF---RKD 581
           +  ++ K +K+  ++       + R E+              + +D  RQ V     + D
Sbjct: 506 LLEMELKELKEKFVH-----DRIGRCENCP---------ILTSDNDELRQQVAMLRTKND 551

Query: 582 LLEELTFKDPTLHGLDSGCS 601
           LLE    K+P +H   + C+
Sbjct: 552 LLESFATKEP-IHSSCANCA 570


>UniRef100_Q7XPI7 OSJNBb0004A17.2 protein [Oryza sativa]
          Length = 1877

 Score =  707 bits (1825), Expect = 0.0
 Identities = 357/673 (53%), Positives = 465/673 (69%), Gaps = 29/673 (4%)

Query: 870  VFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYDE 929
            VFGC C++L +   L KF+ +S   IFLGY+T S+ YRVY L T  +  +  + FDE   
Sbjct: 1197 VFGCKCFVLKSGN-LDKFESRSLDGIFLGYATHSRAYRVYVLSTNKIVETCEVTFDEASP 1255

Query: 930  HSKPK-----------------ENEDTEVPTLQNVP-VQNTENTVEKEDDQNAQ------ 965
             ++P+                 +++D+  P L + P VQ T +        +A       
Sbjct: 1256 GARPEISGVPDESIFVDEDSDDDDDDSIPPPLDSTPPVQETGSPSTTSPSGDAPTTSSSA 1315

Query: 966  ----DQSFQSPPRSWRMVGDHPTDQIIGSTTDGVRTRLSFQDNNMAMISQMEPKSINEAI 1021
                D     P     +   HP D +IG   + V    S++  N A ++  EPK++  A+
Sbjct: 1316 AEEIDGGTSGPTAPRHIQNRHPPDSMIGGLGERVTRNRSYELVNSAFVASFEPKNVCHAL 1375

Query: 1022 IDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQ 1081
             D++W+ AM EEL  FERNKVW+LV       +IGT+WVF+NKL E+G +VRNKARLVAQ
Sbjct: 1376 SDENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQ 1435

Query: 1082 GYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQP 1141
            G+ Q EG+D++ETFAPVARLEAIRILLA+AA K  KLFQMDVKSAFLNG + EEVYV QP
Sbjct: 1436 GFTQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQP 1495

Query: 1142 PGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDL 1201
            PGF N + PNHVFKL KALYGLKQAPRAWY+RL TFL++NGF  G +D TLF      D 
Sbjct: 1496 PGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1555

Query: 1202 LIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEK 1261
            L+VQ+YVDDIIFG +   +  +FS++M  EFEMSMMGEL FFLGLQIKQ   GIF+ Q K
Sbjct: 1556 LLVQIYVDDIIFGGSSHALVAQFSDVMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTK 1615

Query: 1262 YVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVF 1321
            Y K++LKK+ M + K ++TPM  +SSL  DE G+ + ++EYR MIGSLLYLTASRPDI F
Sbjct: 1616 YSKELLKKFDMADCKPIATPMATTSSLGPDEDGEEVDQREYRSMIGSLLYLTASRPDIHF 1675

Query: 1322 AVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVER 1381
            +V LCARFQ   + SH  AVKR+FRY+  T + G+WY   S+  + A+ DAD+AG K++R
Sbjct: 1676 SVCLCARFQASPRTSHRQAVKRMFRYIKSTLEYGIWYSCSSALSVRAFSDADFAGCKIDR 1735

Query: 1382 KSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTS 1441
            KSTSG+C FLG +L+ WS RKQ+++A ST EAEYV+AAS CSQ+LW+ + L+DY L ++ 
Sbjct: 1736 KSTSGTCHFLGTSLVSWSSRKQSSVAQSTAEAEYVAAASACSQVLWMISTLKDYGLSFSG 1795

Query: 1442 VPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKP 1501
            VP+ CDNTSAIN++KNP+QHSR+KHIEI++HF+RD+V+K  I L FV++E QLADIFTKP
Sbjct: 1796 VPLLCDNTSAINIAKNPVQHSRTKHIEIRYHFLRDNVEKGTIVLEFVESEKQLADIFTKP 1855

Query: 1502 LVEDRFNFLKEKL 1514
            L   RF FL+ +L
Sbjct: 1856 LDRSRFEFLRSEL 1868



 Score =  214 bits (545), Expect = 2e-53
 Identities = 159/560 (28%), Positives = 259/560 (45%), Gaps = 80/560 (14%)

Query: 368  KDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQN---KYDESRKTIKILQDSH- 423
            KD +  IDS+   S    + C SL  +L   K+E   LQ    ++ + +K + ++ D   
Sbjct: 577  KDAKTVIDSI--KSIDSCSSCISLKVDLESAKKENSYLQQSLERFAQGKKKLNMILDQSK 634

Query: 424  ---------FDMSEKQREINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGFIKSTET 474
                     +D +E  R    +  G+     E+ ++ I  K           GFI +T +
Sbjct: 635  VSINNQGIGYDFAESLRIGTHEILGVTDGMIELAQKPITFKS---------AGFIGNTSS 685

Query: 475  FQ------NIVGSQNKSTKKSGLGFKDPSKIIGS-----FVPKAKIRVKCCFCDKYGHNE 523
                     +V   +KS        K+P ++          P  K + +C +C K GH  
Sbjct: 686  STPKTSEPKMVPMTSKSKPVELPRPKNPKQVEHKQNQRQTKPVEKTKYECTYCGKAGHLV 745

Query: 524  SVCHVKKKFIKQNNLNLSSERSHLNRSESSQKAEKAKKTCFYCNKSD---HKRQNVTFRK 580
              C  K +  +Q  L          R+  + +  +  +  ++C  S      R++V  R+
Sbjct: 746  GFCFRKARKERQERL----------RTRRATRVPERFECAYHCRSSGVSRFPRRDVHPRR 795

Query: 581  DLL-------------------EELTFKDPTLHGL--------DSGCSRHMTGDRDCFLT 613
            DL                    +  T +  +  G+        DSGCSRHMTG+   F +
Sbjct: 796  DLAGLGQNRHGHLAYNSAHNTKDACTSRTDSDFGVGRSNSWLVDSGCSRHMTGEAKWFTS 855

Query: 614  FEKKDGG-LVTFGNNDKGKIRGKGTIGNLNSARIENVQYVEGLKHNLLSISQLCDSGFEV 672
              +      +TFG+   G++  KGTI   +   +++V  V  LK+NLLS+SQLCD   EV
Sbjct: 856  LTRASSDETITFGDASSGRVMAKGTIKVNDKFMLKDVALVSKLKYNLLSVSQLCDENLEV 915

Query: 673  IFKPNICEVRQTSSNKLFFSGSRRKNLYVLELNDM---PAESCFMSLEKDKWIWHKRAGH 729
             FK +   V   S + +F   SR   ++    +     P+     S  +D + WH+R GH
Sbjct: 916  RFKKDRSRVLDASESPVF-DISRVGRVFFANFDSSAPGPSRCLIASENRDLFFWHRRLGH 974

Query: 730  ISMKTIAKLSQLDLVRGLPKISFEKDRICEACVKGKQVKSSFKTIEFISTQKPLELLHID 789
            I    ++++S +DL+RGLPK+   KD +C  C  GK   SS K +  + T  P +LLH+D
Sbjct: 975  IGFDHLSRISGMDLIRGLPKLKVPKDLVCAPCRHGKMTSSSHKPVTMVMTDGPGQLLHMD 1034

Query: 790  LFGPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITV 849
              GP +  S+ GK Y  V+VDDFSR++WV FL+ K+E+F  FQ+  + +  E    +  +
Sbjct: 1035 TVGPARVQSVGGKWYVLVVVDDFSRYSWVYFLESKEETFGFFQSLARSLALEFPGALRAI 1094

Query: 850  RSDHGGEFENASFKTFFDEN 869
            RSD+G EF+N++F++F D +
Sbjct: 1095 RSDNGSEFKNSAFESFCDSS 1114



 Score =  141 bits (355), Expect = 2e-31
 Identities = 148/620 (23%), Positives = 263/620 (41%), Gaps = 86/620 (13%)

Query: 13  SNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKAKSAWSTDEKA 72
           S +P +FDG N+  WK +ME +L+SQ +++W  + +   VP + +         +    A
Sbjct: 6   SAKPFVFDGHNFVIWKARMEAYLQSQGHNVWNKVKSPYTVPDDAD--------ITPANMA 57

Query: 73  QVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRIDIGVRKFE 132
           QV  N +AR  +   ++  E  RV    +A  +W  L   HEG + ++  R +   ++++
Sbjct: 58  QVDFNYRARNAIIGGISSGEFNRVQHHKSAHDMWTALCNFHEGNNDIQLVRQNQFHKEYQ 117

Query: 133 VFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLP-SMWRPMVTAITQAK 191
            FEM   E+ID  + RF  I++++RS+GK +S +D  R +L CL   +W   VT+IT++ 
Sbjct: 118 RFEMHPGESIDSYFKRFGEIISKLRSVGKEFSDNDNARHLLNCLDYGVWEMKVTSITESA 177

Query: 192 DLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQEPQELEEVH- 250
            L  + ++ L   L+ HE+ +   K +K    L    S  TSS D   V     L  +H 
Sbjct: 178 PLSDLTMDKLYSKLKTHEMDVFHRKGLKHSMALVADPSGSTSSNDSAFVYGGFSLAALHS 237

Query: 251 ------EEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTG 304
                 E+  ED+LAL +++  R    +N   +K  KTN             C+ C +  
Sbjct: 238 VTEEQLEKIPEDDLALFARKFSRAY--KNVRDRKRGKTN---------EPFVCFECGEPN 286

Query: 305 HFKNECPDIKKVQRKPPFK-------------KKAMITWDDMEESDSQEDADTDMGLMAQ 351
           H +  CP +KK   K   K             KKA+       E     D D+D      
Sbjct: 287 HKRVNCPKLKKKSDKTTKKPEGQGRKGKKDLMKKAIHKVLAALEEVQLSDIDSD------ 340

Query: 352 SDDEEEVIIYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYDE 411
            DD++E    K D  +  +       L ++    N C   +++  +  E  E+  +  D 
Sbjct: 341 -DDDQE----KGDKDFSGM-----CCLANNEDFINLCLMALEDKDDSSEHPEVCLD--DI 388

Query: 412 SRKTIKILQDSHFDMSEKQREINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGFIKS 471
                 +  DS  D      E+++++   + +  E+  +    K ++E LK +  G    
Sbjct: 389 PSLDGSLCDDSCSDNDSVDDELSKERMAHLMI--EISDKYRSSKYKIEKLKSENDGMALE 446

Query: 472 TETFQNIVGSQNK-STKKSGLG----FKDPSK--IIGSFVPKAKIRVKCCFCDKYGHNES 524
               ++++  ++  ST  S L      KD  K   +G+  P +     C  C +   +  
Sbjct: 447 IARLRSMIPEEDTCSTCASYLSEINLLKDKLKSCALGAGNP-SSASAACSTCYEMKVDMG 505

Query: 525 VCHVKKKFIKQNNLNLSSERSHLNRSESSQKAEKAKKTCFYCNKSDHKRQNVTF---RKD 581
           +  ++ K +K+  ++       + R E+              + +D  RQ V     + D
Sbjct: 506 LLEMELKELKEKFVH-----DRIGRCENCP---------ILTSDNDELRQQVAMLRTKND 551

Query: 582 LLEELTFKDPTLHGLDSGCS 601
           LLE    K+P +H   + C+
Sbjct: 552 LLESFATKEP-IHSSCANCA 570


>UniRef100_Q8H6I8 Putative gag-pol polyprotein [Zea mays]
          Length = 1892

 Score =  704 bits (1818), Expect = 0.0
 Identities = 361/747 (48%), Positives = 484/747 (64%), Gaps = 71/747 (9%)

Query: 834  FCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENVFGCYCYILNNKEKLGKFDPKSDK 893
            +  R+  +  Y ++T      G+  N S+       VFG  C+IL  + +  KF PK+ +
Sbjct: 1155 YLHRILKKTSYELLT------GKKPNISYF-----RVFGSKCFILIKRGRKSKFAPKTVE 1203

Query: 894  AIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYD------------------------- 928
               LGY + ++ YRV+N  T  VE+S  ++FDE +                         
Sbjct: 1204 GFLLGYDSNTRAYRVFNKSTGLVEVSCDVVFDETNGSQVEQVDLDEIGEEQAPCIALRNM 1263

Query: 929  --------EHSKPKENEDTEVPTLQNVPVQNTENTVEKEDDQNAQ--------------- 965
                    E  +P   +D    ++Q  P    E+  + +++QN +               
Sbjct: 1264 SIGDVCPKESEEPPSTQDQPPSSMQASPPTQNEDEAQNDEEQNQEVKPPQDKSNDQGGDT 1323

Query: 966  ------DQSFQSPPRS---WRMVGDHPTDQIIGSTTDGV--RTRLSFQDNNMAMISQMEP 1014
                  D+    PP       +  DHP D I+G    GV  R+R++    + + +S +EP
Sbjct: 1324 NDQEKEDEEEPRPPHPRVHQAIQRDHPVDTILGDIHKGVTTRSRVAHFCEHYSFVSSIEP 1383

Query: 1015 KSINEAIIDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRN 1074
              + EA+ D  W+ AM+EEL+ F RN+VW+LVP   ++ ++GT+WVFRNK DE G V RN
Sbjct: 1384 HRVEEALQDSDWVVAMQEELNNFTRNEVWHLVPR-PNQNVVGTKWVFRNKQDEHGVVTRN 1442

Query: 1075 KARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNE 1134
            KARLVA+GY+Q EG+D+DET+APVARLE+IRILLAYA +   KL+QMDVKSAFLNG + E
Sbjct: 1443 KARLVAKGYSQVEGLDFDETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKE 1502

Query: 1135 EVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFR 1194
            EVYV QPPGF + E PNHV++L+KALYGLKQAPRAWY+ L  FLI NGF  GK D TLF 
Sbjct: 1503 EVYVEQPPGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFT 1562

Query: 1195 KTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNG 1254
            KT   DL + Q+YVDDIIFG+T    CEEFS +M  +FEMSMMGEL +FLG Q+KQ   G
Sbjct: 1563 KTLENDLFVCQIYVDDIIFGSTNESTCEEFSRIMTQKFEMSMMGELKYFLGFQVKQLREG 1622

Query: 1255 IFISQEKYVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTA 1314
             FISQ KY +DIL K+ M +AK + TPM  +  LD D  GKS+ +K YR MIGSLLYL A
Sbjct: 1623 TFISQTKYTQDILAKFGMKDAKPIKTPMGTNGHLDLDTGGKSVDQKVYRSMIGSLLYLCA 1682

Query: 1315 SRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADY 1374
            SRPDI+ +V +CARFQ+  KESHLTAVKRI RYL  T   GLWY +GS+FDL+ Y DAD+
Sbjct: 1683 SRPDIMLSVCMCARFQSDPKESHLTAVKRILRYLAYTPKFGLWYPRGSTFDLIGYSDADW 1742

Query: 1375 AGDKVERKSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQLED 1434
            AG K+ RKSTSG+CQFLG++L+ W+ +KQN++ALST EAEY++A  CC+Q+LW+R  L D
Sbjct: 1743 AGCKINRKSTSGTCQFLGRSLVSWASKKQNSVALSTAEAEYIAAGHCCAQLLWMRQTLRD 1802

Query: 1435 YSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQL 1494
            Y  + T VP+ CDN SAI ++ NP++HSR+KHI I++HF+RDH QK +I +S+++T++QL
Sbjct: 1803 YGYKLTKVPLLCDNESAIKMADNPVEHSRTKHIAIRYHFLRDHQQKGDIEISYINTKDQL 1862

Query: 1495 ADIFTKPLVEDRFNFLKEKLLIMKNPN 1521
            ADIFTKPL E  F  L+ +L I+ + N
Sbjct: 1863 ADIFTKPLDEQSFTRLRHELNILDSRN 1889



 Score =  179 bits (454), Expect = 6e-43
 Identities = 94/275 (34%), Positives = 144/275 (52%), Gaps = 46/275 (16%)

Query: 596  LDSGCSRHMTGDRDCFLTFEKKDGG--LVTFGNNDKGKIRGKGTIGNLNSARIENVQYVE 653
            LDSGC+ HMTG++  F ++EK       +TFG+ ++G ++G                   
Sbjct: 866  LDSGCTNHMTGEKKMFSSYEKNKDPQRAITFGDGNQGLVKG------------------- 906

Query: 654  GLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSGSRRKNLYVLELNDMPAESCF 713
                                       V + S + + F G     LY++  +    ++C 
Sbjct: 907  -------------------------VTVFRRSDDSIAFKGVLEGQLYLVVFDRAELDTCL 941

Query: 714  MSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDRICEACVKGKQVKSSFKT 773
            ++     W+WH+R  H+ MK + KL + + + GL  + FEKDRIC AC  GKQV +    
Sbjct: 942  IAKTNMGWLWHRRLAHVGMKNLHKLLKGEHILGLTNVHFEKDRICSACQAGKQVGTHHPH 1001

Query: 774  IEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQN 833
               ++T +PLELLH+DLFGP+   S+ G +Y  VIVDD+SRFTWV FL+ K ++ E  + 
Sbjct: 1002 KNIMTTDRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQEKSQTQETLKG 1061

Query: 834  FCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDE 868
            F +R QNE G  I  +RSD+G EF+N+  ++F +E
Sbjct: 1062 FLRRAQNEFGLRIKKIRSDNGTEFKNSQIESFLEE 1096



 Score =  134 bits (336), Expect = 3e-29
 Identities = 127/496 (25%), Positives = 228/496 (45%), Gaps = 74/496 (14%)

Query: 15  RPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKAKSAWSTDEKAQV 74
           +PP F+G +Y  W   M   L S    +W V+  G  VP+  +        + TDE AQ+
Sbjct: 132 KPPTFNGEDYAMWSNLMRFHLTSLHKRIWDVVEYGVQVPSIGD------EDYDTDEVAQI 185

Query: 75  L-LNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRIDIGVRKFEV 133
              NS+A   L  +L+ EE  +V    NAK +WD LK  HEG    K T+ +    +   
Sbjct: 186 EHFNSQAATILLASLSKEEYNKVQGLKNAKEIWDLLKTAHEGDELTKITKRETIEGELGR 245

Query: 134 FEMSENETIDEMYARFTTIVNEMRSLGKA-YSTHDRIRKILRCLPSMWRPMVTAITQAKD 192
           F + + E   +MY R  T+VN++R+LG   +  H+ ++ ILR L  +    V  I     
Sbjct: 246 FHLRQGEEPQDMYNRLKTLVNQVRNLGSTKWDDHEVVKVILRALIFLNPTQVQLIRGNPR 305

Query: 193 LKSMNLEDLIGSLRAHEVVLQGDKPVKKV--------RTLALKASQQTSSVDDEDVQEPQ 244
              M  E++IG+  + E +++G K + ++        + +A KA+++    +    ++P 
Sbjct: 306 YPLMTPEEVIGNFVSFECMIKGSKKINELDEPSTSEAQPVAFKATEEKKE-ESTPSRQPI 364

Query: 245 ELEEVHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTG 304
           +  ++  E    E+ALI K  ++++ +R              K    +S+  CY C K G
Sbjct: 365 DASKLDNE----EMALIIKSFRQILKQRKG------------KDYKPRSKKVCYKCGKPG 408

Query: 305 HFKNECP--------DIKKVQRKPP---FKKK-----AMITWD-DMEESDSQEDAD---- 343
           HF  +CP        D KK +RK     +KKK         WD D   SDS +D D    
Sbjct: 409 HFIAKCPMSSDSDRGDDKKGRRKEKKRYYKKKGGDAHVCREWDSDESSSDSSDDEDAANI 468

Query: 344 -TDMGLM--------AQSDDEEEVIIYKTDSLY-----KDLENKIDSL-LYDSNFLTNRC 388
               GL+          + D ++ +  K+ + Y     +D +N+ D+L +  +N    + 
Sbjct: 469 AVTKGLLFPNVGHKCLMAKDGKKKVKSKSSTKYETSSDEDDKNEEDNLRILFANLNMEQK 528

Query: 389 HSLIKELSEIKEEKEILQNKYD----ESRKTIKILQDSHFDMSEKQREINRKQKGIMSVP 444
             L + +S I E+ ++L ++ D    E++K +K+ ++++    EK  +++ +      + 
Sbjct: 529 EKLNELISAIHEKDDLLDSQEDFLIKENKKHVKV-KNAYALEREKCEKLSSELSTCHEIL 587

Query: 445 SEVQKENILLKKEVET 460
             ++ EN  L  +V++
Sbjct: 588 DNLRNENANLLAKVDS 603


>UniRef100_Q9SDD5 Similar to copia-type pol polyprotein [Oryza sativa]
          Length = 940

 Score =  697 bits (1798), Expect = 0.0
 Identities = 354/690 (51%), Positives = 458/690 (66%), Gaps = 39/690 (5%)

Query: 870  VFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE--- 926
            VFG  CYILN K +  KF PK D    LGY +    YRV+N  +  VEI+  + FDE   
Sbjct: 250  VFGSKCYILNKKARSSKFAPKVDGGFLLGYGSNECAYRVFNKTSGIVEIAPDVTFDETNG 309

Query: 927  -----YDEHS-------------------KPKENEDTEVPTLQNVPVQNTENTVEKEDDQ 962
                  D H                    +P+E +     + Q  P  +T+         
Sbjct: 310  SQVEQVDSHVLGEEEDPREAIKRLALGDVRPREPQQGASSSTQVEPPTSTQANDPSTSSL 369

Query: 963  NAQDQSFQSPPRSWRMVG---------DHPTDQIIGSTTDGVRTRLSFQD--NNMAMISQ 1011
            +  ++  Q PP S  +           DHPTD I+G    GV TR    +   + + +S 
Sbjct: 370  DQGEEGEQVPPSSINLAHPRIHQSIQRDHPTDNILGDINKGVSTRSHIANFCEHYSFVSS 429

Query: 1012 MEPKSINEAIIDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKV 1071
            +EP  + EA+ D  W+ AM+EEL+ F RN+VW LV  ++ + +IGT+W+FRNK DE G V
Sbjct: 430  LEPLRVEEALNDPDWVMAMQEELNNFTRNEVWTLVERSR-QNVIGTKWIFRNKQDEAGVV 488

Query: 1072 VRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGF 1131
            +RNKARLVAQG+ Q EG+D+ ETFAPVARLE+IRILL +A + + KL+QMDVKSAFLNG 
Sbjct: 489  IRNKARLVAQGFTQIEGLDFGETFAPVARLESIRILLTFATNLNFKLYQMDVKSAFLNGL 548

Query: 1132 LNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTT 1191
            +NE VYV QPPGF + + PNHV+KL KALY LKQAPRAWY+ L  FL++NGF  GK D+T
Sbjct: 549  INELVYVEQPPGFKDPKYPNHVYKLHKALYELKQAPRAWYECLRNFLVKNGFEIGKADST 608

Query: 1192 LFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQH 1251
            LF K H+ D+ + Q+YVDDIIFG+T     EEFS +M   FEMSMMGEL FFLGLQIKQ 
Sbjct: 609  LFTKRHDNDIFVCQIYVDDIIFGSTNKSFSEEFSRMMTKRFEMSMMGELKFFLGLQIKQL 668

Query: 1252 SNGIFISQEKYVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLY 1311
              G FI Q KY+KD+LKK+ M  AK + TPM  +  LD +E GK + +K YR +IGSLLY
Sbjct: 669  KEGTFICQTKYLKDMLKKFGMENAKPIHTPMPSNGHLDLNEQGKDVDQKVYRSIIGSLLY 728

Query: 1312 LTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCD 1371
            L ASRPDI+ +V +CARFQ   KE HL AVKRI RYLV T +LGLWY KG+ FDL+ Y D
Sbjct: 729  LCASRPDIMLSVCMCARFQAAPKECHLVAVKRILRYLVHTPNLGLWYPKGARFDLIGYAD 788

Query: 1372 ADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQ 1431
            ADYAG KV+RKSTSG+CQFLG++L+ WS +KQN++ALST EAEY+S  SCC+Q++W++  
Sbjct: 789  ADYAGCKVDRKSTSGTCQFLGRSLVSWSSKKQNSVALSTAEAEYISTGSCCAQLIWMKQT 848

Query: 1432 LEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTE 1491
            L DY L  + +P+ CDN SAI ++ NP+QHSR+KHI+I+HHF+RDH  + +I +  V  +
Sbjct: 849  LRDYGLNVSKIPLLCDNESAIKIANNPVQHSRTKHIDIRHHFLRDHSTRGDIDIQHVRID 908

Query: 1492 NQLADIFTKPLVEDRFNFLKEKLLIMKNPN 1521
             QLADIFTKPL E RF  L+ +L I+ + N
Sbjct: 909  KQLADIFTKPLDEARFCELRSELNILDSRN 938



 Score =  128 bits (321), Expect = 2e-27
 Identities = 61/125 (48%), Positives = 80/125 (63%)

Query: 744 VRGLPKISFEKDRICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFGPVQTASLTGKR 803
           + GL  I FEKDR+C AC  GKQ+ +       ++T +PLELLH+DLFGP+   S+ G +
Sbjct: 42  ILGLTNIQFEKDRVCSACQAGKQIGAHHPVKNVMTTTRPLELLHMDLFGPIAYLSIGGNK 101

Query: 804 YGFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFK 863
           YG VIVDDFS FTWV FL  K E+   F+ F +R QNE    I  +RSD+  EF+N   +
Sbjct: 102 YGLVIVDDFSCFTWVFFLHDKSETQAIFKKFARRAQNEFDLKIKNIRSDNVKEFKNTCIE 161

Query: 864 TFFDE 868
           +F DE
Sbjct: 162 SFLDE 166


>UniRef100_Q7XET2 Hypothetical protein [Oryza sativa]
          Length = 1419

 Score =  696 bits (1795), Expect = 0.0
 Identities = 347/648 (53%), Positives = 456/648 (69%), Gaps = 30/648 (4%)

Query: 870  VFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYDE 929
            VFGC C++L +   L KF+ +S   +FLGY   ++GYRV  L T  +  +  + FDE   
Sbjct: 790  VFGCKCFVLKSGN-LDKFEARSTDGLFLGYPAHTRGYRVLILGTNKIVETCEVSFDEASP 848

Query: 930  HSKPKENEDTEVPTLQNVPVQNTENTVEKEDDQNAQDQSFQSPPRSWRMVGDHPTDQIIG 989
             ++P               +  T + V+ ED +  +D+S            D+  D  +G
Sbjct: 849  GTRPD--------------IAGTLSQVQGEDGRIFEDES------------DYDDDDEVG 882

Query: 990  STTDGV-RTRLSFQD--NNMAMISQMEPKSINEAIIDDSWIKAMKEELSQFERNKVWNLV 1046
            S  +   R++++  D   N A ++  EPK ++ A+ D+SWI AM EEL  FERNKVW LV
Sbjct: 883  SAGERTTRSKVTTHDVCANSAFVASFEPKDVSHALTDESWINAMHEELENFERNKVWTLV 942

Query: 1047 PNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRI 1106
                   +IGT+WVF+NK +E+G +VRNKARLVAQG+ Q EG+D+DETFAPVAR+EAIR+
Sbjct: 943  EPPSGHNVIGTKWVFKNKQNEDGLIVRNKARLVAQGFTQVEGLDFDETFAPVARIEAIRL 1002

Query: 1107 LLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQA 1166
            LLA+AA K  KL+QMDVKSAFLNGF+ EEVYV QPPGF N + PNHVFKL+KALYGLKQA
Sbjct: 1003 LLAFAASKGFKLYQMDVKSAFLNGFIQEEVYVKQPPGFENPDFPNHVFKLSKALYGLKQA 1062

Query: 1167 PRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSN 1226
            PRAWYDRL  FL+  GF+ GK+D TLF   H  + L VQ+YVDDIIFG +   +  +F+ 
Sbjct: 1063 PRAWYDRLKNFLLAKGFTMGKVDKTLFVLKHGDNQLFVQIYVDDIIFGCSTHAVVVDFAE 1122

Query: 1227 LMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTPMHPSS 1286
             M+ EFEMSMMGEL +FLGLQIKQ   G F+ Q KY KD+L+++KM   K +STP+  ++
Sbjct: 1123 TMRREFEMSMMGELSYFLGLQIKQTPQGTFVHQTKYTKDLLRRFKMENCKPISTPIGSTA 1182

Query: 1287 SLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFR 1346
             LD DE G+++ +KEYR MIGSLLYLTASRPDI FAV LCARFQ   + SH  AVKRI R
Sbjct: 1183 VLDPDEDGEAVDQKEYRSMIGSLLYLTASRPDIQFAVCLCARFQASPRASHRQAVKRIMR 1242

Query: 1347 YLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTI 1406
            YL  T + G+WY   SS  L  Y DAD+ G +++RKSTSG+C FLG +LI WS RKQ+++
Sbjct: 1243 YLNHTLEFGIWYSTSSSICLSGYSDADFGGCRIDRKSTSGTCHFLGTSLIAWSSRKQSSV 1302

Query: 1407 ALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKH 1466
            A ST E+EYV+AASCCSQILW+ + L+DY + +  VP++CDNTSAIN++KNP+QHSR+KH
Sbjct: 1303 AQSTAESEYVAAASCCSQILWLLSTLKDYGITFEKVPLFCDNTSAINIAKNPVQHSRTKH 1362

Query: 1467 IEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNFLKEKL 1514
            I+I+ HF+RDHV+K ++ L F+DT+ Q+ADIFTKPL  +RF FL+ +L
Sbjct: 1363 IDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTKPLDSNRFAFLRGEL 1410



 Score =  182 bits (461), Expect = 9e-44
 Identities = 103/277 (37%), Positives = 160/277 (57%), Gaps = 5/277 (1%)

Query: 596 LDSGCSRHMTGDRDCFLTFEKKDGG-LVTFGNNDKGKIRGKGTIGNLNSARIENVQYVEG 654
           +DSG SRHMTGD++ F + +K      + F +     +   G +       ++NV  V+ 
Sbjct: 431 VDSGDSRHMTGDKNWFSSLKKASKTESIVFADASTSAVVATGLVKVNEKFELKNVALVKD 490

Query: 655 LKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSGSRRKNLYVLELNDMPAE--SC 712
           LK+NLLS+SQ+ D  FEV FK    +V  +  + +  + SR + ++  +  +  +   +C
Sbjct: 491 LKYNLLSVSQIVDENFEVHFKKTGSKVFDSCGDSVL-NISRYERVFKADFENSVSLVITC 549

Query: 713 FMS-LEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDRICEACVKGKQVKSSF 771
            ++  +KD   WH+R GH+    + +LS LDLVRGL K+  + D IC  C   K V +S 
Sbjct: 550 LVAKFDKDVMFWHRRLGHVGFDHLTRLSGLDLVRGLSKLKKDLDLICTPCRHAKMVSTSH 609

Query: 772 KTIEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAF 831
             I  + T  P +LLH+D  GP +  S+ GK Y  VIVDDFSR++WV F+  KDE+F+ F
Sbjct: 610 APIVSVMTDAPGQLLHMDTVGPARVQSVGGKWYVLVIVDDFSRYSWVFFMTTKDEAFQHF 669

Query: 832 QNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDE 868
           +    R++ E   ++  +RSD+GGEF+NASF+ F +E
Sbjct: 670 RGLFLRLELEFPGSLKRIRSDNGGEFKNASFEQFCNE 706



 Score =  120 bits (301), Expect = 3e-25
 Identities = 80/320 (25%), Positives = 152/320 (47%), Gaps = 40/320 (12%)

Query: 13  SNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKAKSAWSTDE-K 71
           S +P +FDG+++  W  KM+ ++ +++ D+W  +++   +P           A +TD  K
Sbjct: 8   STKPHIFDGTDFPHWCSKMQSYIMAENYDIWRKVSHPYVIP----------EAINTDALK 57

Query: 72  AQVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRIDIGVRKF 131
            +   N KAR  LS  ++  + +RV     A  +W+ LK  H+GT ++KE R D+  +++
Sbjct: 58  TEFENNCKARNILSSGISRSDYDRVAHLETAHEIWNALKNFHQGTKNIKELRRDLFKKEY 117

Query: 132 EVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCL-----PSMWRPMVTA 186
             FEM   E +D+  +RF  I++++RS+  +Y  +    +I R        S+W   VT+
Sbjct: 118 IKFEMKSGEALDDYLSRFNKILSDLRSVDSSYDANYPQSEISRHFLNGLDMSIWEMKVTS 177

Query: 187 ITQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQEPQEL 246
           I ++ ++ ++ L+ L   L+  E+ +   K   K   L    S  +S + D     P  L
Sbjct: 178 IQESVNMSTLTLDSLYTKLKTREMNILSRKVDSKSSAL---VSSSSSLIVDASSSMPSFL 234

Query: 247 -------EEVHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYG 299
                  ++  E+  E++LAL++ RI R M      ++  P                C+ 
Sbjct: 235 AAFNATSDDQLEQIEEEDLALVANRIARAMNNARNRKRGGPN--------------RCFE 280

Query: 300 CNKTGHFKNECPDIKKVQRK 319
           C    H ++ CP + + +R+
Sbjct: 281 CGSIDHLRSHCPKLGRGKRE 300


>UniRef100_Q850V9 Putative polyprotein [Oryza sativa]
          Length = 1128

 Score =  693 bits (1789), Expect = 0.0
 Identities = 420/994 (42%), Positives = 564/994 (56%), Gaps = 99/994 (9%)

Query: 596  LDSGCSRHMTGDRDCFLTFEK--KDGGLVTFGNNDKGKIRG---KGTIGNLNSARIENV- 649
            LDS C++ MTGDR  F TFE   K+   VTFG+N K  + G   K + G L   R+ +V 
Sbjct: 164  LDSVCTQRMTGDRAMFTTFEVEGKEQEKVTFGDNSKRNVIGLVAKTSFGWLWHRRLAHVG 223

Query: 650  --QYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSN-------KLFFSGSRRKNLY 700
              Q  +  K +L  +  L D  FE   K  +C   Q S         K   S SR   L 
Sbjct: 224  MNQLSKLSKRDL--VVGLKDVKFE---KDKLCSACQASKQVACSHPTKSIMSTSRPLELL 278

Query: 701  VLEL------NDMPAESCFMSLEKD----KWIWHKRAGHIS---MKTIAKLSQLDLVRGL 747
             ++L        +   S  + +  D     W++      I     K  AK +Q +    L
Sbjct: 279  HMDLFGPTTYKSIGGNSHCLVIVDDYSCYTWVFFLHDKCIVAELFKKFAKRAQNEFSCTL 338

Query: 748  PKISFEKDRICEACVKGKQVKSSFKTIEFISTQKPLELLH--IDLFGPVQTASLTGKRYG 805
             KI  +               S FK          L + H     + P Q   +  K   
Sbjct: 339  VKIRSDNG-------------SKFKNTNIEDYCDDLSIKHELSATYSPQQNGVVERKNRT 385

Query: 806  FV-----IVDDF--SRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFE 858
             +     ++D++  S   W   +     +      +  R+  +  Y +I  R  +   F 
Sbjct: 386  LIEMARTMLDEYGVSDSFWAEAINTACHATNRL--YLHRLLKKTSYELIVGRKPNVAYFR 443

Query: 859  NASFKTFFDENVFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEI 918
                       VFGC CYI     +L KF+ + D+   LGY++ SK YRVYN     VE 
Sbjct: 444  -----------VFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKGIVEE 492

Query: 919  SMHIIFDEYDEHS--------------------------KPKENEDTEVPTLQNVPVQNT 952
            +  + FDE +                             KP E ED    + Q+ P  + 
Sbjct: 493  TADVQFDETNGSQEGHENLDDVGDEGLMRAMKNMSIGDVKPIEVEDKPSTSTQDEPSTSA 552

Query: 953  ENTVEKEDDQNAQDQSFQSPPRSWRMVG-DHPTDQIIGSTTDGVRTRLSFQD--NNMAMI 1009
              +  + + +  + Q    PPR +  +  DHP DQ++G  + GV+TR        + + +
Sbjct: 553  SPSQAQVEVEKEKAQDPPMPPRIYTALSKDHPIDQVLGDISKGVQTRSPVASICEHYSFV 612

Query: 1010 SQMEPKSINEAIIDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEG 1069
            S +EPK ++EA+ D  W+ A+ EEL+ F RNKVW LV   +D  +IGT+WVFRNK DE  
Sbjct: 613  SCLEPKHVDEALYDPDWMNAIHEELNNFARNKVWTLVERPRDHNVIGTKWVFRNKQDENR 672

Query: 1070 KVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLN 1129
             VVRNKARLVAQG+ Q E +D+ ETF PVARLEAIRILLA+A+   IKLFQMDVKSAFLN
Sbjct: 673  LVVRNKARLVAQGFTQVEDLDFGETFGPVARLEAIRILLAFASCFDIKLFQMDVKSAFLN 732

Query: 1130 GFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKID 1189
            G + E V+V QPPGF + + PNHV+KL+KALYGLKQAPRAWY+RL  FL+   F  GK+D
Sbjct: 733  GEIAELVFVEQPPGFDDPKYPNHVYKLSKALYGLKQAPRAWYERLRDFLLSKDFKIGKVD 792

Query: 1190 TTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIK 1249
            TTLF K    D  + Q+YVDDIIFG+T    C+EF ++M  EFEMSM+ EL FFLGLQIK
Sbjct: 793  TTLFTKIIGDDFFVCQIYVDDIIFGSTNEVFCKEFGDMMSREFEMSMIEELSFFLGLQIK 852

Query: 1250 QHSNGIFISQEKYVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSL 1309
            Q  +G F+SQ KY+KD+LK++ + +AK + TPM  +  LD DE GK +  K YR MIGSL
Sbjct: 853  QLKDGTFVSQTKYIKDLLKRFGLEDAKPIKTPMATNWHLDLDEGGKPVDLKLYRSMIGSL 912

Query: 1310 LYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAY 1369
            LYLTASRPDI+F+V + ARFQ   KE HL AVKRI RYL  ++ + LWY KG+ F LV Y
Sbjct: 913  LYLTASRPDIMFSVCMYARFQAAPKECHLVAVKRILRYLKHSSTISLWYPKGAKFKLVGY 972

Query: 1370 CDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVR 1429
             D+DYAG KV+RKSTSGSCQ LG++L+ WS +KQN++ALST EAEY+SA SCC+Q+LW++
Sbjct: 973  SDSDYAGYKVDRKSTSGSCQMLGRSLVSWSSKKQNSVALSTAEAEYISAGSCCAQLLWMK 1032

Query: 1430 NQLEDYSLRY--TSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSF 1487
              L DY + +  T  P+ C+N S I ++ NP+QH R+KHI+I+HHF+ DHV K +I +S 
Sbjct: 1033 QILLDYGISFTETQTPLLCNNDSTIKIANNPVQHFRTKHIDIRHHFLTDHVAKCDIVISH 1092

Query: 1488 VDTENQLADIFTKPLVEDRFNFLKEKLLIMKNPN 1521
            + TE+QLADIFTKPL E RF  L+ +L ++   N
Sbjct: 1093 IRTEDQLADIFTKPLDETRFCKLRNELNVINFSN 1126


>UniRef100_Q84VI2 Gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  684 bits (1766), Expect = 0.0
 Identities = 345/653 (52%), Positives = 452/653 (68%), Gaps = 11/653 (1%)

Query: 869  NVFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYD 928
            ++FG  CYIL ++E+  K DPKSD  IFLGYST S+ YRV+N +T+TV  S++++ D+  
Sbjct: 920  HIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLS 979

Query: 929  EHSKPKENEDTEVPTLQNVPV-----QNTENTVEKEDDQNAQDQSFQSPPRSWRMVGDHP 983
               K    ED       NV       +N EN+    D+ N      +S  R  +M   HP
Sbjct: 980  PARKKDVEEDVRTSG-DNVADAAKSGENAENSDSATDESNINQPDKRSSTRIQKM---HP 1035

Query: 984  TDQIIGSTTDGVRTRLSFQD--NNMAMISQMEPKSINEAIIDDSWIKAMKEELSQFERNK 1041
             + IIG    GV TR    +  +N   +S++EPK++ EA+ D+ WI AM+EEL QF+RN+
Sbjct: 1036 KELIIGDPNRGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNE 1095

Query: 1042 VWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARL 1101
            VW LVP  +   +IGT+W+F+NK +EEG + RNKARLVAQGY Q EG+D+DETFAPVARL
Sbjct: 1096 VWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARL 1155

Query: 1102 EAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALY 1161
            E+IR+LL  A     KL+QMDVKSAFLNG+LNEEVYV QP GF +   P+HV++L KALY
Sbjct: 1156 ESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALY 1215

Query: 1162 GLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMC 1221
            GLKQAPRAWY+RL+ FL + G+ +G ID TLF K    +L+I Q+YVDDI+FG    +M 
Sbjct: 1216 GLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEML 1275

Query: 1222 EEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTP 1281
              F   MQSEFEMS++GEL +FLGLQ+KQ  + IF+SQ +Y K+I+KK+ M  A    TP
Sbjct: 1276 RHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTP 1335

Query: 1282 MHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAV 1341
                  L KDE+G S+ +K YR MIGSLLYLTASRPDI +AVG+CAR+Q   K SHL  V
Sbjct: 1336 APTHLKLSKDEAGTSVDQKPYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQV 1395

Query: 1342 KRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCR 1401
            KRI +Y+ GT+D G+ Y   SS  LV YCDAD+AG   +RKSTSG C +LG  LI W  +
Sbjct: 1396 KRILKYVNGTSDYGIMYCHCSSSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSK 1455

Query: 1402 KQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQH 1461
            KQN ++LST EAEY++A S CSQ++W++  L++Y++    + +YCDN SAIN+SKNP+QH
Sbjct: 1456 KQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQH 1515

Query: 1462 SRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNFLKEKL 1514
            SR+KHI+I+HH+IRD V  K I L  VDTE Q+ADIFTK L  ++F  L+ KL
Sbjct: 1516 SRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKL 1568



 Score =  387 bits (995), Expect = e-105
 Identities = 277/882 (31%), Positives = 428/882 (48%), Gaps = 78/882 (8%)

Query: 9   EGGSSNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPT--NKEGA----VKA 62
           EGG  NRPP+ DGSNY +WK +M  FL+S D+  W  +  G   P   + EG     +K 
Sbjct: 6   EGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKP 65

Query: 63  KSAWSTDEKAQVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKET 122
           +  W+ +E    L NSKA   L   +       ++ CT AK   + LK  HEGTS VK +
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDACEILKSTHEGTSKVKMS 125

Query: 123 RIDIGVRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSMWRP 182
           R+ +   KFE  +M E E I + +     I N   +LG+  +    +RKILR LP  +  
Sbjct: 126 RLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDM 185

Query: 183 MVTAITQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQE 242
            VTAI +A+D+ +M +++LIGSL+  E+ L  D+  KK + LA  ++       DE  ++
Sbjct: 186 KVTAIEEAQDICNMRVDELIGSLQTFELGLS-DRAEKKSKNLAFVSN-------DEGEED 237

Query: 243 PQELEEVHEEEAEDELALISKRIQRMMLRRNQIRK--------------KFPKTNISIKT 288
             +L+   +E   + + L+ K+  +++ R ++ +K              K+ K +  +K 
Sbjct: 238 EYDLDT--DEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRS-DVKP 294

Query: 289 EADKSQVTCYGCNKTGHFKNECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGL 348
              K  + C+GC   GH   ECP   K  RK           +  +ESDS  D +  +G+
Sbjct: 295 SHSKG-IQCHGCEGYGHIIAECPTHLKKHRKG--LSVCQSDTESEQESDSDRDVNALIGI 351

Query: 349 MAQSDDEEEVIIYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNK 408
              ++D  +     ++  + +L      L   S  +  +   L K +++++ EKE  + +
Sbjct: 352 FETAEDSSDT---DSEITFDELAASYRKLCIKSEKILQQEAQLKKVIADLEAEKEAHKEE 408

Query: 409 YDESRKTIKILQDSHFDMSEKQREINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGF 468
             E +  +  L     +M++  + +N+         S+   E +LL K     +    GF
Sbjct: 409 ISELKGEVGFLNSKLENMTKSIKMLNKG--------SDTLDEVLLLGKNAGNQRG--LGF 458

Query: 469 IKSTE---TFQNIVGSQNKSTKKSGLGFKDPSKIIGSFVPKAKIRV-KCCFCDKYGHNES 524
              +    T    V ++N++        +  S+  G    K+K +  +C +C KYGH + 
Sbjct: 459 NPKSAGRTTMTEFVPAKNRTGATMS---QHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKP 515

Query: 525 VCHVKKKFIKQNNLNLSSERSHLNRSESSQKAEKAKKTCFYCNKSDHKRQNVTFRKDLLE 584
            C+           +L     H  +S +S+K    K      +K+     + + R    E
Sbjct: 516 FCY-----------HLHGHPHHGTQSSNSRK----KMMWVPKHKAVSLVVHTSLRASAKE 560

Query: 585 ELTFKDPTLHGLDSGCSRHMTGDRDCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLNSA 644
           +          LDSGCSRHMTG ++  L  E      VTFG+  KGKI G G + +    
Sbjct: 561 DWY--------LDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLP 612

Query: 645 RIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSGSRRKNLYVLEL 704
            +  V  V+GL  NL+SISQLCD GF V F  + C V    S  L      + N Y+   
Sbjct: 613 SLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTP 672

Query: 705 NDMPAES-CFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDRICEACVK 763
            +    S C  S E +  IWH+R GH+ ++ + K+     VRG+P +  E+ RIC  C  
Sbjct: 673 QETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKILDKSAVRGIPNLKIEEGRICGECQI 732

Query: 764 GKQVKSSFKTIEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVDDFSRFTWVLFLKH 823
           GKQVK S + ++  +T + LELLH+DL GP+Q  SL GKRY +V+VDDFSRFTWV F++ 
Sbjct: 733 GKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVNFIRE 792

Query: 824 KDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTF 865
           K  +FE F+    R+Q EK   I  +RSDHG EFEN+ F  F
Sbjct: 793 KSGTFEVFKKLSLRLQREKDCVIKRIRSDHGREFENSRFTEF 834


>UniRef100_Q7XLK0 OSJNBa0009K15.10 protein [Oryza sativa]
          Length = 845

 Score =  684 bits (1766), Expect = 0.0
 Identities = 343/681 (50%), Positives = 458/681 (66%), Gaps = 29/681 (4%)

Query: 870  VFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYDE 929
            VFGC CYI     +L KF+ + D+   LGY++ SK YRVYN     VE +  + FDE + 
Sbjct: 163  VFGCKCYIYRKGVRLTKFESRCDEGFLLGYASNSKAYRVYNKNKSIVEETDDVQFDETNG 222

Query: 930  HSKPKENEDT-------------EVPTLQNVPVQNTENTVEKEDDQ----------NAQD 966
              +  EN D               +  ++ + V++  +T  +++              ++
Sbjct: 223  SQEGHENLDDVGDEGLMRAMKNMSIGDVKLIEVEDKPSTSTQDEPSISATPSQAQVEVEE 282

Query: 967  QSFQSPPRSWR----MVGDHPTDQIIGSTTDGVRTRLSFQD--NNMAMISQMEPKSINEA 1020
            +  Q PP   R    +  DHP DQ++G  + GV+TR        + + +S +EPK ++EA
Sbjct: 283  EKAQDPPMPPRIHTALSKDHPIDQVLGDISKGVQTRSRVASICEHYSFVSCLEPKHVDEA 342

Query: 1021 IIDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVA 1080
            + D  W+ AM EEL+ F RNKVW  +   +D  +IGT+WVFRNK DE G VVRNKARLVA
Sbjct: 343  LCDPDWMNAMHEELNNFARNKVWTFIERPRDHNVIGTKWVFRNKQDENGLVVRNKARLVA 402

Query: 1081 QGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQ 1140
            Q + + EG+D+ ETFAPV RLE IRILLA+A+   IKLFQMDVKSAFLNG + E V+V Q
Sbjct: 403  QAFTRVEGLDFGETFAPVTRLEVIRILLAFASCFDIKLFQMDVKSAFLNGEIAELVFVEQ 462

Query: 1141 PPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTD 1200
            PPGF + + PNH++K +KALYGLKQAPR WY+RL  FL+   F  GK+DTTLF K    D
Sbjct: 463  PPGFEDPKNPNHIYKFSKALYGLKQAPRVWYERLRDFLLSKDFKIGKVDTTLFTKIIGDD 522

Query: 1201 LLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQE 1260
              + Q+YVDDIIFG+T    C+EF +++  EFE+SM+GEL FFL LQIKQ  +G+F+SQ 
Sbjct: 523  FFVCQIYVDDIIFGSTNEVFCKEFGDMISREFEISMIGELSFFLTLQIKQLKDGMFVSQT 582

Query: 1261 KYVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIV 1320
            KY+K +LK++ + +AK + TPM  +  LD D  GK +  K YR MIGSLLYLTASRPDI+
Sbjct: 583  KYIKYLLKRFGLEDAKPIKTPMATNGHLDLDGGGKPVDLKLYRSMIGSLLYLTASRPDIM 642

Query: 1321 FAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVE 1380
            F+V +CARFQ   KE HL AVKRI RYL  ++ +GLWY K + F LV Y D+DYA  KV+
Sbjct: 643  FSVCMCARFQAAPKECHLVAVKRILRYLKHSSTIGLWYPKSAKFKLVGYSDSDYASCKVD 702

Query: 1381 RKSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYT 1440
            RKSTSGSCQ LG++L+ WS +KQN +ALST EAEYVSA SCC+Q+LW++  L DY + +T
Sbjct: 703  RKSTSGSCQMLGRSLVSWSSKKQNFVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFT 762

Query: 1441 SVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTK 1500
              P+ CDN SAI ++ NP+QHSR+KHI+I+HHF+RDHV K +I +S + TE+QLA+IFTK
Sbjct: 763  KTPLLCDNDSAIKIANNPVQHSRTKHIDIRHHFLRDHVAKCDIVISHIRTEDQLAEIFTK 822

Query: 1501 PLVEDRFNFLKEKLLIMKNPN 1521
            PL E RF  L+ +L ++   N
Sbjct: 823  PLDETRFCKLRNELNVIDFSN 843


>UniRef100_Q84VH8 Gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  682 bits (1760), Expect = 0.0
 Identities = 347/654 (53%), Positives = 455/654 (69%), Gaps = 13/654 (1%)

Query: 869  NVFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYD 928
            ++FG  CYIL ++E+  K DPKSD  IFLGYST S+ YRV+N +T+TV  S++++ D+  
Sbjct: 920  HIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLS 979

Query: 929  EHSKPKENEDTEVPTL-QNVPV-----QNTENTVEKEDDQNAQDQSFQSPPRSWRMVGDH 982
               K    ED  V TL  NV       +N EN+    D+ N      +S  R  +M   H
Sbjct: 980  PARKKDVEED--VRTLGDNVADAAKSGENAENSDSATDESNINQPDKRSSTRIQKM---H 1034

Query: 983  PTDQIIGSTTDGVRTRLSFQD--NNMAMISQMEPKSINEAIIDDSWIKAMKEELSQFERN 1040
            P + IIG    GV TR    +  +N   +S++EPK++ EA+ D+ WI AM+EEL QF+RN
Sbjct: 1035 PKELIIGDPNRGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRN 1094

Query: 1041 KVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVAR 1100
            +VW LVP  +   +IGT+W+F+NK +EEG + RNKARLVAQGY Q EG+D+DETFAPVAR
Sbjct: 1095 EVWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVAR 1154

Query: 1101 LEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKAL 1160
            LE+IR+LL  A     KL+QMDVKSAFLNG+LNEEVYV QP GF +   P+HV++L KAL
Sbjct: 1155 LESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKAL 1214

Query: 1161 YGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKM 1220
            YGLKQAPRAWY+RL+ FL + G+ +G ID TLF K    +L+I Q+YVDDI+FG    +M
Sbjct: 1215 YGLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEM 1274

Query: 1221 CEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKKYKMNEAKIMST 1280
               F   MQSEFEMS++GEL +FLGLQ+KQ  + IF+SQ +Y K+I+KK+ M  A    T
Sbjct: 1275 LRHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRT 1334

Query: 1281 PMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTA 1340
            P      L KDE+G S+ +  YR MIGSLLYLTASRPDI +AVG+CAR+Q   K SHLT 
Sbjct: 1335 PAPTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQ 1394

Query: 1341 VKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSC 1400
            VKRI +Y+ GT+D G+ Y   S+  LV YCDAD+AG   +RKSTSG C +LG  LI W  
Sbjct: 1395 VKRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFS 1454

Query: 1401 RKQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQ 1460
            +KQN ++LST EAEY++A S CSQ++W++  L++Y++    + +YCDN SAIN+SKNP+Q
Sbjct: 1455 KKQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQ 1514

Query: 1461 HSRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNFLKEKL 1514
            HSR+KHI+I+HH+IRD V  K I L  VDTE Q+ADIFTK L  ++F  L+ KL
Sbjct: 1515 HSRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKL 1568



 Score =  398 bits (1023), Expect = e-109
 Identities = 283/907 (31%), Positives = 424/907 (46%), Gaps = 128/907 (14%)

Query: 9   EGGSSNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPT--NKEGA----VKA 62
           EGG  NRPP+ DGSNY +WK +M  FL+S D+  W  +  G   P   + EG     +K 
Sbjct: 6   EGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKP 65

Query: 63  KSAWSTDEKAQVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKET 122
           +  W+ +E    L NSKA   L   +       ++ CT AK  W+ LKI HEGTS VK +
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMS 125

Query: 123 RIDIGVRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSMWRP 182
           R+ +   KFE  +M E E I + +     I N   +LG+  +    +RKILR LP  +  
Sbjct: 126 RLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDM 185

Query: 183 MVTAITQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQE 242
            VTAI +A+D+ +M +++LIGSL+  E+ L  D+  KK + LA  ++       DE  ++
Sbjct: 186 KVTAIEEAQDICNMRVDELIGSLQTFELGLS-DRAEKKSKNLAFVSN-------DEGEED 237

Query: 243 PQELEEVHEEEAEDELALISKRIQRMMLRRNQIRK--------------KFPKTNISIKT 288
             +L+   +E   + + L+ K+  +++ R ++ +K              K+ K +  +K 
Sbjct: 238 EYDLDT--DEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKRS-DVKP 294

Query: 289 EADKSQVTCYGCNKTGHFKNECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGL 348
              K  + C+GC   GH   ECP   K  RK           +  +ESDS  D +   G+
Sbjct: 295 SHSKG-IQCHGCEGYGHIIAECPTHLKKHRKG--LSVCQSDTESEQESDSDRDVNALTGI 351

Query: 349 MAQSDDEEEVIIYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNK 408
              ++D  +           D E   D L      L  +   ++++ +++K         
Sbjct: 352 FETAEDSSDT----------DSEITFDELAASYRKLCIKSEKILQQEAQLK--------- 392

Query: 409 YDESRKTIKILQDSHFDMSEKQREINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGF 468
                   K++ D   +    + EI           SE++ E   L  ++ET+KK +   
Sbjct: 393 --------KVIADLEAEKEAHEEEI-----------SELKGEVGFLNSKLETMKKSIKML 433

Query: 469 IKSTETFQNIVGSQNKSTKKSGLGFKDPSKIIGSFVPKAKIRVKCCFCDKYGHNESVCHV 528
            K ++T   ++     +  + GLGF           PK   R                  
Sbjct: 434 NKGSDTLDEVLLLGKNAGNQRGLGFN----------PKFAGRT----------------T 467

Query: 529 KKKFIKQNNLNLSSERSHLNRSESSQ--KAEKAKKTCFYCNKSDHKR------------- 573
             +F+   N   ++   HL+R   +Q  K+++ K  C YC K  H +             
Sbjct: 468 MTEFVPAKNRTGTTMSQHLSRHHGTQQKKSKRKKWRCHYCGKYGHIKPFCYHLHGHPHHG 527

Query: 574 -QNVTFRKDLLEELTFKDPTL-------------HGLDSGCSRHMTGDRDCFLTFEKKDG 619
            Q+   RK ++     K  +L               LDSGCSRHMTG ++  L  E    
Sbjct: 528 TQSSNSRKKMMWVPKHKAVSLVVHTSLRASAKEDWYLDSGCSRHMTGVKEFLLNIEPCST 587

Query: 620 GLVTFGNNDKGKIRGKGTIGNLNSARIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNIC 679
             VTFG+  KGKI G G + +     +  V  V+GL  NL+SISQLCD GF V F  + C
Sbjct: 588 SYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISISQLCDEGFNVNFTKSEC 647

Query: 680 EVRQTSSNKLFFSGSRRKNLYVLELNDMPAES-CFMSLEKDKWIWHKRAGHISMKTIAKL 738
            V    S  L      + N Y+    +    S C  S E +  IWH+R GH+ ++ + K+
Sbjct: 648 LVTNEKSEVLMKGSRSKDNCYLWTPQETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKI 707

Query: 739 SQLDLVRGLPKISFEKDRICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFGPVQTAS 798
                VRG+P +  E+ RIC  C  GKQVK S + +   +T + LELLH+DL GP+Q  S
Sbjct: 708 IDKGAVRGIPNLKIEEGRICGECQIGKQVKMSHQKLRHQTTSRVLELLHMDLMGPMQVES 767

Query: 799 LTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFE 858
           L GKRY +V+VDDFSRFTWV F++ K E+FE F+    R+Q EK   I  +RSDHG EFE
Sbjct: 768 LGGKRYAYVVVDDFSRFTWVNFIREKSETFEVFKELSLRLQREKDCVIKRIRSDHGREFE 827

Query: 859 NASFKTF 865
           N+ F  F
Sbjct: 828 NSRFTEF 834


>UniRef100_Q84VI4 Gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  682 bits (1759), Expect = 0.0
 Identities = 344/653 (52%), Positives = 452/653 (68%), Gaps = 11/653 (1%)

Query: 869  NVFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYD 928
            ++FG  CYIL ++E+  K DPKSD  IFLGYST S+ YRV+N +T+TV  S++++ D+  
Sbjct: 918  HIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLS 977

Query: 929  EHSKPKENEDTEVPTLQNVPV-----QNTENTVEKEDDQNAQDQSFQSPPRSWRMVGDHP 983
               K    ED       NV       +N EN+    D+ N      +S  R  +M   HP
Sbjct: 978  PARKKDVEEDVRTSG-DNVADAAKSGENAENSDSATDESNINQPDKRSSTRIQKM---HP 1033

Query: 984  TDQIIGSTTDGVRTRLSFQD--NNMAMISQMEPKSINEAIIDDSWIKAMKEELSQFERNK 1041
             + IIG    GV TR    +  +N   +S++EPK++ EA+ D+ WI AM+EEL QF+RN+
Sbjct: 1034 KELIIGDPNRGVTTRSREVEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNE 1093

Query: 1042 VWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARL 1101
            VW LVP  +   +IGT+W+F+NK +EEG + RNKARLVAQGY Q EG+D+DETFAPVARL
Sbjct: 1094 VWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARL 1153

Query: 1102 EAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALY 1161
            E+IR+LL  A     KL+QMDVKSAFLNG+LNEEVYV QP GF +   P+HV++L KALY
Sbjct: 1154 ESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEVYVEQPKGFADPTHPDHVYRLKKALY 1213

Query: 1162 GLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMC 1221
            GLKQAPRAWY+RL+ FL + G+ +G ID TLF K    +L+I Q+YVDDI+FG    +M 
Sbjct: 1214 GLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEML 1273

Query: 1222 EEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTP 1281
              F   MQSEFEMS++GEL +FLGLQ+KQ  + IF+SQ +Y K+I+KK+ M  A    TP
Sbjct: 1274 RHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTP 1333

Query: 1282 MHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAV 1341
                  L KDE+G S+ +  YR MIGSLLYLTASRPDI +AVG+CAR+Q   K SHLT V
Sbjct: 1334 APTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQV 1393

Query: 1342 KRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCR 1401
            KRI +Y+ GT+D G+ Y   S+  LV YCDAD+AG   +RKSTSG C +LG  LI W  +
Sbjct: 1394 KRILKYVNGTSDYGIMYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSK 1453

Query: 1402 KQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQH 1461
            KQN ++LST EAEY++A S CSQ++W++  L++Y++    + +YCDN SAIN+SKNP+QH
Sbjct: 1454 KQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQH 1513

Query: 1462 SRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNFLKEKL 1514
            SR+KHI+I+HH+IRD V  K I L  VDTE Q+ADIFTK L  ++F  L+ KL
Sbjct: 1514 SRTKHIDIRHHYIRDLVDDKVITLKHVDTEEQIADIFTKALDANQFEKLRGKL 1566



 Score =  397 bits (1019), Expect = e-108
 Identities = 279/882 (31%), Positives = 425/882 (47%), Gaps = 80/882 (9%)

Query: 9   EGGSSNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPT--NKEGA----VKA 62
           EGG  NRPP+ DGSNY +WK +M  FL+S D+  W  +  G   P   + EG     +K 
Sbjct: 6   EGGPVNRPPILDGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKP 65

Query: 63  KSAWSTDEKAQVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKET 122
           +  W+ +E    L NSKA   L   +       ++ CT AK  W+ LKI HEGTS VK +
Sbjct: 66  EEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKIS 125

Query: 123 RIDIGVRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSMWRP 182
           R+ +   KFE  +M E E I + +     I N   +LG+  +    +RKILR LP  +  
Sbjct: 126 RLQLLATKFENLKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDM 185

Query: 183 MVTAITQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQE 242
            VTAI +A+D+ +M +++LIGSL+  E+ L  D+  KK + LA  ++         D  E
Sbjct: 186 KVTAIEEAQDICNMRVDELIGSLQTFELGLS-DRAEKKSKNLAFVSN---------DEGE 235

Query: 243 PQELEEVHEEEAEDELALISKRIQRMMLRRNQIRK--------------KFPKTNISIKT 288
             E +   +E   + + L+ K+  +++ R ++ +K              K+ K +  +K 
Sbjct: 236 EDEYDLNTDEGLTNAVVLLGKQFNKVLNRMDKRQKPHVQNIPFDIRKGSKYQKKS-DVKP 294

Query: 289 EADKSQVTCYGCNKTGHFKNECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGL 348
              K  + C+GC   GH   ECP   K  RK           +  +ESDS  D +   G+
Sbjct: 295 SHSKG-IQCHGCEGYGHIIAECPTHLKKHRKG--LSVCQSDTESEQESDSDRDVNALTGI 351

Query: 349 MAQSDDEEEVIIYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNK 408
              ++D  +     ++  + +L      L   S  +  +   L K +++++ EKE  + +
Sbjct: 352 FETAEDSSDT---DSEITFDELATSYRKLCIKSEKILQQEAQLKKVIADLEAEKEAHKEE 408

Query: 409 YDESRKTIKILQDSHFDMSEKQREINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGF 468
             E +  +  L     +M++  + +N+         S+   E +LL K     +    GF
Sbjct: 409 ISELKGEVGFLNSKLENMTKSIKMLNKG--------SDTLDEVLLLGKNAGNQRG--LGF 458

Query: 469 IKSTE---TFQNIVGSQNKSTKKSGLGFKDPSKIIGSFVPKAKIRV-KCCFCDKYGHNES 524
              +    T    V ++N++        +  S+  G    K+K +  +C +C KYGH + 
Sbjct: 459 NPKSAGRTTMTEFVPAKNRTGATMS---QHRSRHHGMQQKKSKRKKWRCHYCGKYGHIKP 515

Query: 525 VCHVKKKFIKQNNLNLSSERSHLNRSESSQKAEKAKKTCFYCNKSDHKRQNVTFRKDLLE 584
            C+                  HL+    +Q +   KK  +      HK  ++     L  
Sbjct: 516 FCY------------------HLHPHHGTQSSNSRKKMMWV---PKHKAVSLVVHTSL-- 552

Query: 585 ELTFKDPTLHGLDSGCSRHMTGDRDCFLTFEKKDGGLVTFGNNDKGKIRGKGTIGNLNSA 644
             + K+     LDSGCSRHMTG ++  L  E      VTFG+  KGKI G G + +    
Sbjct: 553 RASAKEDWY--LDSGCSRHMTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLP 610

Query: 645 RIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSGSRRKNLYVLEL 704
            +  V  V+GL  NL+SISQLCD GF V F  + C V    S  L      + N Y+   
Sbjct: 611 SLNKVLLVKGLTANLISISQLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTP 670

Query: 705 NDMPAES-CFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDRICEACVK 763
            +    S C  S E +  IWH+R GH+ ++ + K+     VRG+P +  E+ RIC  C  
Sbjct: 671 QETSYSSTCLSSKEDEVRIWHQRFGHLHLRGMKKIIDKGAVRGIPNLKIEEGRICGECQI 730

Query: 764 GKQVKSSFKTIEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVDDFSRFTWVLFLKH 823
           GKQVK S + ++  +T + LELLH+DL GP+Q  SL GKRY +V+VDDFSRFTWV F++ 
Sbjct: 731 GKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVDDFSRFTWVKFIRE 790

Query: 824 KDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTF 865
           K E+FE F+    R+Q EK   I  +RSDHG EFEN+    F
Sbjct: 791 KSETFEVFKELSLRLQREKDCVIKRIRSDHGREFENSRLTEF 832


>UniRef100_Q8VY36 Opie2a pol [Zea mays]
          Length = 1048

 Score =  676 bits (1745), Expect = 0.0
 Identities = 345/697 (49%), Positives = 465/697 (66%), Gaps = 44/697 (6%)

Query: 870  VFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE--- 926
            VFG  CYIL  K +  KF PK+ +   LGY + +K YRV+N  +  VE+S  ++FDE   
Sbjct: 353  VFGSKCYILVKKGRTSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNG 412

Query: 927  -----------YDEHS--------------KPKENEDTEVP---TLQNVPVQNTENTVE- 957
                        DE                +P+E+ + + P   T+ + P Q+ E   + 
Sbjct: 413  SLREQVVNLDDVDEEDVPTAAMRTMAIGDVRPQEHLEQDQPSSTTMVHPPTQDDEQAPQV 472

Query: 958  -------KEDDQNAQDQSFQSPPRSWRMV--GDHPTDQIIGSTTDGVRTRLSFQD--NNM 1006
                    +D Q  ++++ Q+PP   R     +HP +QI+G  + GV TR    +   + 
Sbjct: 473  GAHDQGGAQDVQVEEEEAPQAPPTQVRATIQRNHPVNQILGDISKGVTTRSRLVNFCEHY 532

Query: 1007 AMISQMEPKSINEAIIDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLD 1066
            + +S +EP  + E ++D  W+ AM+EEL+ F+RN+VW LVP  + + ++GT+WVFRNK D
Sbjct: 533  SFVSSIEPFRVEEVLLDPDWVLAMQEELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQD 591

Query: 1067 EEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSA 1126
            E G V RNKARLVA+GY Q  G+D++ETFAPVARL++IRI LAYAAH S +L+QMDVKSA
Sbjct: 592  EHGVVTRNKARLVAKGYAQVAGLDFEETFAPVARLKSIRIWLAYAAHHSFRLYQMDVKSA 651

Query: 1127 FLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRG 1186
            FLNG + EEVYV QPPGF ++  P+HV KL+KALYGLKQAPRAWY+ L  FLI N F  G
Sbjct: 652  FLNGPIKEEVYVEQPPGFEDERFPDHVCKLSKALYGLKQAPRAWYECLRDFLIANAFKVG 711

Query: 1187 KIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGL 1246
            K D TLF KT + DL + Q+YVDDIIFG+T    CEEFS +M  +FEMSMMGEL +FLG 
Sbjct: 712  KADPTLFTKTCDGDLFVCQIYVDDIIFGSTNQNSCEEFSRVMTQKFEMSMMGELSYFLGF 771

Query: 1247 QIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMI 1306
            Q++Q  +G FISQ KY +D++K++ M +AK   TPM      D ++ GKS+ +K YR  I
Sbjct: 772  QVRQLKDGTFISQTKYTQDLIKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSTI 831

Query: 1307 GSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDL 1366
            GSLLYL ASRPDI+ +V +CARFQ+  +E HL AVKRI RYLV T   G+WY KGS+FDL
Sbjct: 832  GSLLYLCASRPDIMLSVCMCARFQSDPRECHLVAVKRILRYLVATPCFGIWYPKGSTFDL 891

Query: 1367 VAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQIL 1426
            + Y D+DYA  KV+RKSTS  CQFLG++L+ W+ +KQ ++ALST EAEYV+   CC+Q+L
Sbjct: 892  IGYSDSDYARCKVDRKSTSRMCQFLGRSLVSWNSKKQTSVALSTAEAEYVAVGQCCAQLL 951

Query: 1427 WVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALS 1486
            W+R  L D+    + VP+ CDN SAI +++NP++HSR+KHI+I+HHF+RDH QK  I + 
Sbjct: 952  WMRQTLRDFGYNLSEVPLLCDNESAIRIAENPVEHSRTKHIDIRHHFLRDHQQKGVIEVF 1011

Query: 1487 FVDTENQLADIFTKPLVEDRFNFLKEKLLIMKNPNKD 1523
             V +EN LADIFTKPL E  F  L  +L ++ + N D
Sbjct: 1012 HVSSENHLADIFTKPLDEQTFCKLHSELNVLDSRNLD 1048



 Score =  204 bits (518), Expect = 2e-50
 Identities = 108/269 (40%), Positives = 158/269 (58%), Gaps = 4/269 (1%)

Query: 604 MTGDRDCFLTFEK-KDG-GLVTFGNNDKGKIRGKGTIGNLNSARIENVQYVEGLKHNLLS 661
           MTG++  F ++ K KD    + FG+ ++GK++G G I   +   I NV  VE L +N LS
Sbjct: 1   MTGEKKMFTSYVKNKDSQDSIIFGDGNQGKVKGLGKIAISSEHSISNVFLVESLGYNFLS 60

Query: 662 ISQLCDSGFEVIFKPNICEVRQTSSNKLFFSGSRRKNLYVLELNDMPA--ESCFMSLEKD 719
           +SQLC+ G+  +F      V + S   L F G     LY+++     A  ++C ++    
Sbjct: 61  VSQLCNMGYNCLFTNVDVSVFRRSDGSLAFKGVLDGKLYLVDFAKEEAGLDACLIAKTSM 120

Query: 720 KWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFEKDRICEACVKGKQVKSSFKTIEFIST 779
            W+WH+R  H+ MK + KL + + V GL  + F+KDR C AC  GKQV+ S  T   ++T
Sbjct: 121 GWLWHRRLAHVGMKNLHKLLKGEHVIGLTNVQFKKDRPCVACQAGKQVRGSHHTKNVMTT 180

Query: 780 QKPLELLHIDLFGPVQTASLTGKRYGFVIVDDFSRFTWVLFLKHKDESFEAFQNFCKRVQ 839
            +PLE+LH+DLFGPV   S+ G +YG VIVDDFSRFTWV FL+ K E+    + + +R Q
Sbjct: 181 SRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQDKSETQGTLKRYLRRAQ 240

Query: 840 NEKGYNIITVRSDHGGEFENASFKTFFDE 868
           NE    +  +RSD+G EF+N   + F  E
Sbjct: 241 NEFELKVKKIRSDNGSEFKNLQVEEFLVE 269


>UniRef100_Q84VH6 Gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  676 bits (1745), Expect = 0.0
 Identities = 341/653 (52%), Positives = 448/653 (68%), Gaps = 11/653 (1%)

Query: 869  NVFGCYCYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYD 928
            ++FG  CYIL ++E+  K DPKSD  IFLGYST S+ YRV+N +T+TV  S++++ D+  
Sbjct: 921  HIFGSPCYILADREQRRKMDPKSDAGIFLGYSTNSRAYRVFNSRTRTVMESINVVVDDLT 980

Query: 929  EHSKPKENEDTEVPTLQNVP-----VQNTENTVEKEDDQNAQDQSFQSPPRSWRMVGDHP 983
               K    ED       NV       +N EN+    D+ N      +   R  +M   HP
Sbjct: 981  PARKKDVEEDVRTSG-DNVADTAKSAENAENSDSATDEPNINQPDKRPSIRIQKM---HP 1036

Query: 984  TDQIIGSTTDGVRTRLSFQD--NNMAMISQMEPKSINEAIIDDSWIKAMKEELSQFERNK 1041
             + IIG    GV TR    +  +N   +S++EPK++ EA+ D+ WI AM+EEL QF+RN+
Sbjct: 1037 KELIIGDPNRGVTTRSREIEIVSNSCFVSKIEPKNVKEALTDEFWINAMQEELEQFKRNE 1096

Query: 1042 VWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARL 1101
            VW LVP  +   +IGT+W+F+NK +EEG + RNKARLVAQGY Q EG+D+DETFAPVARL
Sbjct: 1097 VWELVPRPEGTNVIGTKWIFKNKTNEEGVITRNKARLVAQGYTQIEGVDFDETFAPVARL 1156

Query: 1102 EAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALY 1161
            E+IR+LL  A     KL+QMDVKSAFLNG+LNEE YV QP GF++   P+HV++L KALY
Sbjct: 1157 ESIRLLLGVACILKFKLYQMDVKSAFLNGYLNEEAYVEQPKGFVDPTHPDHVYRLKKALY 1216

Query: 1162 GLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMC 1221
            GLKQAPRAWY+RL+ FL + G+ +G ID TLF K    +L+I Q+YVDDI+FG    +M 
Sbjct: 1217 GLKQAPRAWYERLTEFLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEML 1276

Query: 1222 EEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTP 1281
              F   MQSEFEMS++GEL +FLGLQ+KQ  + IF+SQ KY K+I+KK+ M  A    TP
Sbjct: 1277 RHFVQQMQSEFEMSLVGELTYFLGLQVKQMEDSIFLSQSKYAKNIVKKFGMENASHKRTP 1336

Query: 1282 MHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAV 1341
                  L KDE+G S+ +  YR MIGSLLYLTASRPDI +AVG+CAR+Q   K SHL  V
Sbjct: 1337 APTHLKLSKDEAGTSVDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLNQV 1396

Query: 1342 KRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCR 1401
            KRI +Y+ GT+D G+ Y   S   LV YCDAD+AG   +RKSTSG C +LG  LI W  +
Sbjct: 1397 KRILKYVNGTSDYGIMYCHCSGSMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSK 1456

Query: 1402 KQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQH 1461
            KQN ++LST EAEY++A S CSQ++W++  L++Y++    + +YCDN SAIN+SKNP+QH
Sbjct: 1457 KQNCVSLSTAEAEYIAAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQH 1516

Query: 1462 SRSKHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNFLKEKL 1514
            SR+KHI+I+HH+IR+ V  K I L  VDTE Q+ADIFTK L   +F  L+ KL
Sbjct: 1517 SRTKHIDIRHHYIRELVDDKVITLEHVDTEEQIADIFTKALDAKQFEKLRGKL 1569



 Score =  397 bits (1020), Expect = e-108
 Identities = 281/895 (31%), Positives = 429/895 (47%), Gaps = 103/895 (11%)

Query: 9   EGGSSNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNG---------DFVPTNKEGA 59
           EGG  NRPP+ DG+NY +WK +M  FL+S D+  W  +  G         +  PTN+   
Sbjct: 6   EGGPVNRPPILDGTNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTNE--- 62

Query: 60  VKAKSAWSTDEKAQVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHV 119
           +K +  W+ +E    L NSKA   L   +       ++ CT AK  W+ LK  HEGTS V
Sbjct: 63  LKPEEDWTKEEDELALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKTTHEGTSKV 122

Query: 120 KETRIDIGVRKFEVFEMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSM 179
           K +R+ +   KFE  +M E E I + +     I N   +LG+  +    +RKILR LP  
Sbjct: 123 KMSRLQLLATKFENLKMKEEECIHDFHMTILEIANACTALGERMTDEKLVRKILRSLPKR 182

Query: 180 WRPMVTAITQAKDLKSMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDED 239
           +   VTAI +A+D+ +M +++LIGSL+  E+ L  D+  KK + LA  ++       DE 
Sbjct: 183 FDMKVTAIEEAQDICNMRVDELIGSLQTFELGLS-DRTEKKSKNLAFVSN-------DEG 234

Query: 240 VQEPQELEEVHEEEAEDELALISKRIQRMMLRRNQIRKKFPKTNISI----------KTE 289
            ++  +L+   +E   + +  + K+  +++ R ++ R+K    NIS+          K++
Sbjct: 235 EEDEYDLDT--DEGLTNAVVFLGKQFNKVLNRMDR-RQKPHVRNISLDIRKGSEYQRKSD 291

Query: 290 ADKSQ---VTCYGCNKTGHFKNECPDIKKVQRKPPFKKKAMITWDDMEESDSQEDADTDM 346
              S    + C GC   GH K ECP   K QRK        +   D  ES+ + D+D D+
Sbjct: 292 EKPSHSKGIQCRGCEGYGHIKAECPTHLKKQRKG-----LSVCRSDDTESEQESDSDRDV 346

Query: 347 GLMA--------QSDDEEEVIIYKTDSLYKDLENKIDSLLYDSNFLTNRCHSLI------ 392
             +          SD + E+   +    Y++L  K + +L     L     +L       
Sbjct: 347 NALTGRFESAEDSSDTDSEITFDELAIFYRELCIKSEKILQQEAQLKKVIANLEAEKEAH 406

Query: 393 -KELSEIKEEKEILQNKYDESRKTIKILQDSHFDMSEKQREINRKQKGIMSVPSEVQKEN 451
            +E+S++K E   L +K +   K+IK+L     DM ++  ++ +K      +    +   
Sbjct: 407 EEEISKLKGEVGFLNSKLENMTKSIKMLNKGS-DMLDZVLQLGKKVGNQRGLGFNHKSAG 465

Query: 452 ILLKKEVETLKKDLTGFIKSTETFQNIVGSQNKSTKKSGLGFKDPSKIIGSFVPKAKIRV 511
                E    K   TG   S    ++  G+Q K +K+                     + 
Sbjct: 466 RTTMTEFVPAKNS-TGATMSQHRSRHH-GTQQKRSKRK--------------------KW 503

Query: 512 KCCFCDKYGHNESVCHVKKKFIKQNNLNLSSERSHLNRSESSQKAEKAKKTCFYCNKSDH 571
           +C +C KYGH +  C+                  H +    +Q +   +K  +      H
Sbjct: 504 RCHYCGKYGHIKPFCY----------------HLHGHPHHGTQGSSSGRKMMWV---PKH 544

Query: 572 KRQNVTFRKDLLEELTFKDPTLHGLDSGCSRHMTGDRDCFLTFEKKDGGLVTFGNNDKGK 631
           K  ++     L    + K+     LDSGCSRHMTG ++  +  E      VTFG+  KGK
Sbjct: 545 KIVSLVVHTSL--RASAKEDWY--LDSGCSRHMTGVKEFLVNIEPCSTSYVTFGDGSKGK 600

Query: 632 IRGKGTIGNLNSARIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFF 691
           I G G + +     +  V  V+GL  NL+SISQLCD GF V F  + C V    S  L  
Sbjct: 601 ITGMGKLVHEGLPSLNKVLLVKGLTVNLISISQLCDEGFNVNFTKSECLVTNEKSEVLMK 660

Query: 692 SGSRRKNLYVLELNDMPAES-CFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKI 750
               + N Y+    +    S C  S E +  IWH+R GH+ ++ + K+     VRG+P +
Sbjct: 661 GSRSKDNCYLWTPQESSHSSTCLFSKEDEVKIWHQRFGHLHLRGMKKIIDKGAVRGIPNL 720

Query: 751 SFEKDRICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVD 810
             E+ RIC  C  GKQVK S + ++  +T + LELLH+DL GP+Q  SL GKRY +V+VD
Sbjct: 721 KIEEGRICGECQIGKQVKMSHQKLQHQTTSRVLELLHMDLMGPMQVESLGGKRYAYVVVD 780

Query: 811 DFSRFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTF 865
           DFSRFTWV F++ K ++FE F+    R+Q EK   I  +RSDHG EFEN+ F  F
Sbjct: 781 DFSRFTWVNFIREKSDTFEVFKELSLRLQREKDCVIKRIRSDHGREFENSKFTEF 835


>UniRef100_Q84MV2 Putative gag-pol polyprotein [Oryza sativa]
          Length = 1975

 Score =  675 bits (1742), Expect = 0.0
 Identities = 348/677 (51%), Positives = 463/677 (67%), Gaps = 35/677 (5%)

Query: 879  NNKEK---LGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYDEHSKPKE 935
            N +EK   L KF+ + D+   LGY + SK YRVYN     VE +  + FDE +   +  E
Sbjct: 1298 NEQEKGVRLTKFESRCDEGFLLGYVSNSKAYRVYNKNKGIVEETADVQFDETNGSQEGHE 1357

Query: 936  NEDTE-----VPTLQNVPVQNTENTVEKEDDQNA-------------------QDQSFQS 971
            N D       +  ++N+ +++ +  +E ED  +                    +++  Q 
Sbjct: 1358 NLDDVGDEGLMRAMKNMSIRDVK-PIEVEDKPSTSTQDEPSTFATPSQAQVEVEEEKAQD 1416

Query: 972  PPRSWR----MVGDHPTDQIIGSTTDGVRTRLSFQD--NNMAMISQMEPKSINEAIIDDS 1025
            PP   R    +  DHP DQ++G  +  V+TR        + + +S +EPK ++EA+ D  
Sbjct: 1417 PPMPQRIHTALSKDHPIDQVLGDISKDVQTRSRVASICEHYSFVSCLEPKHVDEALCDLD 1476

Query: 1026 WIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQ 1085
            W+ AM EEL+ F RNKVW LV   +D  +IGT+WVFRNK DE+G VVR+KARLVAQ + Q
Sbjct: 1477 WMNAMHEELNNFARNKVWTLVERPRDHNVIGTKWVFRNKQDEKGLVVRSKARLVAQDFTQ 1536

Query: 1086 QEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFI 1145
             EG+D+ ETFAPVARLEAIRILLA+A+   IKLFQMDVKSAFLNG + E V+V QPPGF 
Sbjct: 1537 VEGLDFGETFAPVARLEAIRILLAFASCFDIKLFQMDVKSAFLNGEIAELVFVEQPPGFE 1596

Query: 1146 NKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQ 1205
            + + PNHV+KL+KALYGLK APRAWY+RL  FL+   F  GK+DTTL  K  + D ++ Q
Sbjct: 1597 DPKNPNHVYKLSKALYGLKPAPRAWYERLRDFLLPKDFKIGKVDTTLSTKIIDDDFVVCQ 1656

Query: 1206 VYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKD 1265
            +YVDDIIFG+T    C+EF ++M  EFEMSM+GEL FFLGLQIKQ  +G F+SQ KY+KD
Sbjct: 1657 IYVDDIIFGSTNEVFCKEFGDMMSREFEMSMVGELSFFLGLQIKQLKDGTFVSQTKYIKD 1716

Query: 1266 ILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGL 1325
            +LK++ + +AK + TPM  +  LD DE GK +  K Y  MIGSLLYLTASRPDI+F+V +
Sbjct: 1717 LLKRFGLEDAKPIKTPMATNGHLDLDEGGKPVDLKLYHSMIGSLLYLTASRPDIMFSVCM 1776

Query: 1326 CARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTS 1385
            CARFQ   K+ HL AVKRI RYL  ++ +GLWY KG+ F +V+Y D DYA  KV+RKSTS
Sbjct: 1777 CARFQAAPKKCHLVAVKRILRYLKHSSTIGLWYPKGAKFKIVSYSDLDYAVCKVDRKSTS 1836

Query: 1386 GSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIY 1445
            GSCQ LG++L+ WS +KQN++ALST EAEYVSA SCC+Q+LW++  L DY + +T  P+ 
Sbjct: 1837 GSCQMLGRSLVSWSSKKQNSVALSTAEAEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLL 1896

Query: 1446 CDNTSAINLSKNPIQHSRSKHIEIKHHFIRDH-VQKKNIALSFVDTENQLADIFTKPLVE 1504
            CDN SAI ++ NP+QHSR+KHI+I++HF++DH V K +I +S + TENQLADIFTKPL E
Sbjct: 1897 CDNDSAIKIANNPVQHSRTKHIDIRYHFLKDHVVAKSDIVISHIRTENQLADIFTKPLDE 1956

Query: 1505 DRFNFLKEKLLIMKNPN 1521
             RF  L+ +L ++   N
Sbjct: 1957 TRFCKLRNELNVIDFSN 1973



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 9/146 (6%)

Query: 3   KVKYIAEGGSSNRPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKA 62
           +VK + E     + P+F+G+NY  WK KM   L++    +W+++  G         A+  
Sbjct: 759 RVKMLNEVNHVGKAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--------AITG 810

Query: 63  KSAWSTDEKAQVLLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKET 122
                 D +  + LN++A   L   L+ EE +RV     A   W+ L   HEGTS   + 
Sbjct: 811 THLTGIDHR-NLQLNAQAMNALFNCLSQEECDRVSNLETAYENWNKLAEIHEGTSEYNDA 869

Query: 123 RIDIGVRKFEVFEMSENETIDEMYAR 148
           ++     ++E F M  +E+++ MY R
Sbjct: 870 KLHFLKIQYETFSMLPHESVNAMYGR 895



 Score = 38.5 bits (88), Expect = 1.6
 Identities = 84/404 (20%), Positives = 154/404 (37%), Gaps = 78/404 (19%)

Query: 270  LRRNQIRKKFP-KTNISIKTEA-DKSQVTCYGCNKTGHFKNECPD--------------- 312
            L++ ++ +  P K  I+ + E  DK +  C+ C +  HF ++CP                
Sbjct: 911  LKKKEMEETSPSKKCIAPQAEVEDKGKGKCFECGEKRHFASKCPSKDDDGDKSSMKKSGG 970

Query: 313  ---IKKVQRKPPFKKKAMITWDDMEESDSQEDADTDMGLMAQSDDEEEVIIYKTDSLYKD 369
               +KK++++    +  +  W   EES +   ++ + G  A S  ++  ++       K+
Sbjct: 971  YKLMKKLKKEGKKIEVFIGDWVTNEESSASSGSEEEGGDDASSKKKKMAVV-----AIKE 1025

Query: 370  LENKIDSLLYDSNFLTNRCHSLIKELSEIKEEKEILQNKYDESRKTIKILQDSHFDMSEK 429
              +    L      L  +  S +  LS+ + + +     YDE    + + ++ H    ++
Sbjct: 1026 APSPFAPLC-----LMAKGSSKVTSLSDSESDDDCDYASYDE---LVSMFEELHAYSEKE 1077

Query: 430  QREINRKQKGIMSVPSEVQKENILLKKEVETLKKDLTGFIKSTETFQNIVGS-QNKSTKK 488
              +    +K   S+  EV  E +    E  T+  +     K  E   N++ + Q+ +   
Sbjct: 1078 IVKFKALKKDHASL--EVLYEELKTSHERLTISHE-----KLKEAHDNLLSTYQHGALID 1130

Query: 489  SGLG---FKDPSKIIGSFVPKAKIRVKC-----------------CFCDKYGHNESVCHV 528
             G+      D +    + V  + I   C                 C      +NE    V
Sbjct: 1131 VGISCVLLDDSATCHIAHVASSSISTSCDDLVDMPSSSSSPCVSICDASLVENNELKEQV 1190

Query: 529  KKK-------FIKQNNLN--LSSERSHLNRSESSQKAEKAKKTCFYCN---KSDHKRQNV 576
             K        F  +N L+  LS +R  LN+       +K KK         KS+ +   V
Sbjct: 1191 AKLNKSLERCFKGKNTLDKILSEQRCILNKEGLGFIPKKGKKPSHRATRFVKSNGRLMMV 1250

Query: 577  TFRKD----LLEELTFKDPTLHG-LDSGCSRHMTGDRDCFLTFE 615
                D    L   + ++    H  LDSGC++HMTGDR  F TF+
Sbjct: 1251 ALLLDMWVLLYSVVNYRTGGSHWVLDSGCTQHMTGDRAMFTTFD 1294


>UniRef100_Q8VY34 Opie2 pol [Zea mays]
          Length = 691

 Score =  673 bits (1736), Expect = 0.0
 Identities = 345/692 (49%), Positives = 463/692 (66%), Gaps = 44/692 (6%)

Query: 875  CYILNNKEKLGKFDPKSDKAIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDE-------- 926
            CYIL  K +  KF PK+ +   LGY + +K YRV+N  +  VE+S  ++FDE        
Sbjct: 1    CYILVKKGRTSKFAPKAVEGFLLGYDSNTKAYRVFNKSSGLVEVSSDVVFDETNGSLREQ 60

Query: 927  ------YDEHS--------------KPKENEDTEVP---TLQNVPVQNTENT--VEKEDD 961
                   DE                +P+E+ + + P   T+ + P Q+ E    VE  D 
Sbjct: 61   VVNLDDVDEEDVPTAAMCTMAIGNVRPQEHLEQDQPSSTTMVHPPTQDDEQAPQVEAHDQ 120

Query: 962  QNAQD------QSFQSPPRSWRMV--GDHPTDQIIGSTTDGVRTRLSFQD--NNMAMISQ 1011
              AQD      ++ Q+PP   R     +HP +QI+G  + GV TR    +   + + +S 
Sbjct: 121  GGAQDVQVEEEEAPQAPPTQVRATIQRNHPVNQILGDISKGVTTRSRLVNFCEHYSFVSS 180

Query: 1012 MEPKSINEAIIDDSWIKAMKEELSQFERNKVWNLVPNNQDKTIIGTRWVFRNKLDEEGKV 1071
            +EP  + E ++D  W+ AM+EEL+ F+RN+VW LVP  + + ++GT+WVFRNK  E G V
Sbjct: 181  IEPFRVEEVLLDPDWVLAMQEELNNFKRNEVWTLVPRPK-QNVVGTKWVFRNKQYEHGVV 239

Query: 1072 VRNKARLVAQGYNQQEGIDYDETFAPVARLEAIRILLAYAAHKSIKLFQMDVKSAFLNGF 1131
             RNKARLVA+GY Q  G+D++ETFAPVARL++IRI LAYAAH S +L+QMDVKSAFLNG 
Sbjct: 240  TRNKARLVAKGYAQVAGLDFEETFAPVARLKSIRIWLAYAAHHSFRLYQMDVKSAFLNGP 299

Query: 1132 LNEEVYVSQPPGFINKEKPNHVFKLTKALYGLKQAPRAWYDRLSTFLIENGFSRGKIDTT 1191
            + EEVYV QPPGF ++  P+HV KL+KALYGLKQAPRAWY+ L  FLI N F  GK D T
Sbjct: 300  IKEEVYVEQPPGFEDERFPDHVCKLSKALYGLKQAPRAWYECLRDFLIANAFKVGKADPT 359

Query: 1192 LFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEFSNLMQSEFEMSMMGELGFFLGLQIKQH 1251
            LF KT + DL + Q+YVDDIIFG+T    CEEFS +M  +FEMSMMGEL +FLG Q++Q 
Sbjct: 360  LFTKTCDGDLFVCQIYVDDIIFGSTNQNSCEEFSRVMTQKFEMSMMGELSYFLGFQVRQL 419

Query: 1252 SNGIFISQEKYVKDILKKYKMNEAKIMSTPMHPSSSLDKDESGKSISEKEYRGMIGSLLY 1311
             +G FISQ KY +D++K++ M +AK   TPM      D ++ GKS+ +K YR  IGSLLY
Sbjct: 420  KDGTFISQTKYTQDLIKRFGMKDAKPAKTPMGTDGHTDLNKGGKSVDQKAYRSTIGSLLY 479

Query: 1312 LTASRPDIVFAVGLCARFQTCAKESHLTAVKRIFRYLVGTTDLGLWYRKGSSFDLVAYCD 1371
            L ASRPDI+ +V +CARFQ+  +E HL AVKRI RYLV T   G+WY KGS+FDL+ Y D
Sbjct: 480  LCASRPDIMLSVCMCARFQSDPRECHLVAVKRILRYLVATPCFGIWYPKGSTFDLIGYSD 539

Query: 1372 ADYAGDKVERKSTSGSCQFLGQALIGWSCRKQNTIALSTTEAEYVSAASCCSQILWVRNQ 1431
            +DYA  KV+RKSTS +CQFLG++L+ W+ +KQ ++ALST EAEYV+   CC+Q+LW+R  
Sbjct: 540  SDYARCKVDRKSTSRTCQFLGRSLVSWNSKKQTSVALSTAEAEYVAVGQCCAQLLWMRQT 599

Query: 1432 LEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRSKHIEIKHHFIRDHVQKKNIALSFVDTE 1491
            L D+    + VP+ CDN SAI +++NP++HSR+KHI+I+HHF+RDH QK +I +  V +E
Sbjct: 600  LRDFGYNLSEVPLLCDNESAIRIAENPVEHSRTKHIDIRHHFLRDHQQKGDIEVFHVSSE 659

Query: 1492 NQLADIFTKPLVEDRFNFLKEKLLIMKNPNKD 1523
            N LADIFTKPL E  F  L  +L ++ + N D
Sbjct: 660  NHLADIFTKPLDEQTFCKLHSELNVLDSRNLD 691


>UniRef100_Q60DR2 Putative polyprotein [Oryza sativa]
          Length = 1577

 Score =  672 bits (1734), Expect = 0.0
 Identities = 351/717 (48%), Positives = 460/717 (63%), Gaps = 56/717 (7%)

Query: 834  FCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDENVFGCYCYILNNKEKLGKFDPKSDK 893
            +  RV  +  Y +I  R  +   F            VFGC CYI     +L KF+ + D+
Sbjct: 886  YLHRVLKKTSYEVIVGRKPNIAYFR-----------VFGCKCYIHRKGVRLTKFESRCDE 934

Query: 894  AIFLGYSTTSKGYRVYNLKTQTVEISMHIIFDEYDEHSKPKENEDT-------------E 940
               LGY++ SK YRVYN     VE +  + FDE +   +  EN D               
Sbjct: 935  GFLLGYASKSKAYRVYNKNKGIVEETADVQFDETNGSQEGHENLDDVGDEGLMRVMKNMS 994

Query: 941  VPTLQNVPVQNTENTVEKEDDQNA----------QDQSFQSPPRSWR----MVGDHPTDQ 986
            +  ++ + V++  +T  +++   +          +++  Q PP   R    +  DHP DQ
Sbjct: 995  IGDVKPIEVEDKPSTSTQDEPSTSAMPSQAQVEVEEEKAQEPPMPPRIHTALSKDHPIDQ 1054

Query: 987  IIGSTTDGVRTRLSFQD--NNMAMISQMEPKSINEAIIDDSWIKAMKEELSQFERNKVWN 1044
            ++G  + GV+TR        + + +S +E K ++EA+ D  W+ AM EEL  F RNKVW 
Sbjct: 1055 VLGDISKGVQTRSRVTSICEHYSFVSCLERKHVDEALCDPDWMNAMHEELKNFARNKVWT 1114

Query: 1045 LVPNNQDKTIIGTRWVFRNKLDEEGKVVRNKARLVAQGYNQQEGIDYDETFAPVARLEAI 1104
            LV   +D  +IGT+WVFRNK DE G VVRNKARLVAQG+ Q EG+D+ ETFAPVARLEAI
Sbjct: 1115 LVERPRDHNVIGTKWVFRNKQDENGLVVRNKARLVAQGFTQVEGLDFGETFAPVARLEAI 1174

Query: 1105 RILLAYAAHKSIKLFQMDVKSAFLNGFLNEEVYVSQPPGFINKEKPNHVFKLTKALYGLK 1164
             ILLA+A+   IKLFQMDVKSAFLN                + + PNHV+KL+KALYGL+
Sbjct: 1175 CILLAFASCFDIKLFQMDVKSAFLN----------------DTKYPNHVYKLSKALYGLR 1218

Query: 1165 QAPRAWYDRLSTFLIENGFSRGKIDTTLFRKTHNTDLLIVQVYVDDIIFGATKIKMCEEF 1224
            QAPRAWY+RL  FL+   F  GK+D TLF K    D  + Q+YVDDIIFG+T    C+EF
Sbjct: 1219 QAPRAWYERLRDFLLSKDFKIGKVDITLFTKIIGDDFFVYQIYVDDIIFGSTNEVFCKEF 1278

Query: 1225 SNLMQSEFEMSMMGELGFFLGLQIKQHSNGIFISQEKYVKDILKKYKMNEAKIMSTPMHP 1284
             ++M  EFEMSM+GEL FFLGLQIKQ  NG F+SQ KY+KD+LK++ + +AK + TPM  
Sbjct: 1279 GDMMSREFEMSMIGELSFFLGLQIKQLKNGTFVSQTKYIKDLLKRFGLEDAKPIKTPMAT 1338

Query: 1285 SSSLDKDESGKSISEKEYRGMIGSLLYLTASRPDIVFAVGLCARFQTCAKESHLTAVKRI 1344
            +  LD DE GK +  K YR MIGSLLYLT SRPDI+F+V +CARFQ   KE HL AVKRI
Sbjct: 1339 NGHLDLDEGGKPVDLKLYRSMIGSLLYLTVSRPDIMFSVCMCARFQAAPKECHLVAVKRI 1398

Query: 1345 FRYLVGTTDLGLWYRKGSSFDLVAYCDADYAGDKVERKSTSGSCQFLGQALIGWSCRKQN 1404
             RYL  ++ +GLWY KG+ F LV Y D DYAG KV+RKSTS SCQ LG++L+ WS +KQN
Sbjct: 1399 LRYLKHSSTIGLWYPKGAKFKLVGYSDPDYAGCKVDRKSTSSSCQMLGRSLVSWSSKKQN 1458

Query: 1405 TIALSTTEAEYVSAASCCSQILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIQHSRS 1464
            ++ALST E EYVSA SCC+Q+LW++  L DY + +T  P+ CDN  AI ++ NP+QHSR+
Sbjct: 1459 SVALSTAETEYVSAGSCCAQLLWMKQTLLDYGISFTKTPLLCDNDGAIKIANNPVQHSRT 1518

Query: 1465 KHIEIKHHFIRDHVQKKNIALSFVDTENQLADIFTKPLVEDRFNFLKEKLLIMKNPN 1521
            KHI+I+HHF+RDHV K +I +S + TE+QLADIFTKPL E RF  L+ +L I+   N
Sbjct: 1519 KHIDIRHHFLRDHVAKCDIVISHIRTEDQLADIFTKPLDETRFCKLRNELNIIDFSN 1575



 Score =  279 bits (714), Expect = 4e-73
 Identities = 227/895 (25%), Positives = 381/895 (42%), Gaps = 118/895 (13%)

Query: 15  RPPLFDGSNYYFWKGKMELFLRSQDNDMWAVITNGDFVPTNKEGAVKAKSAWSTDEKAQV 74
           + P+F+G+NY  WK KM   L++    +W+++  G         A+        D +  +
Sbjct: 10  KAPMFNGTNYSTWKIKMSTHLKAMSFHIWSIVDVGF--------AITGTPLMEIDHR-NL 60

Query: 75  LLNSKARLFLSCALTMEESERVDECTNAKGVWDTLKIHHEGTSHVKETRIDIGVRKFEVF 134
            LN++A   L  +L+ EE +RV     A  +W+ L   HEGTS  K+ ++     ++E F
Sbjct: 61  QLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAKLHFLKIQYETF 120

Query: 135 EMSENETIDEMYARFTTIVNEMRSLGKAYSTHDRIRKILRCLPSMWRPMVTAITQAKDLK 194
            M  +E++++MY R   IVN+++ LG  Y+  +  +K+LR LP  +  +VT +  + D+ 
Sbjct: 121 SMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETLVTMLINS-DMS 179

Query: 195 SMNLEDLIGSLRAHEVVLQGDKPVKKVRTLALKASQQTSSVDDEDVQEPQELEEVHEEEA 254
            M    L+G +  +++  +  K     R    + ++  S++   +  E          + 
Sbjct: 180 RMTPASLLGKINTNDMRKERGKGSNSNRRRNRRPNKTLSNLRCFECGEKGHFASKCPSKD 239

Query: 255 EDELALISKRIQRMMLRRNQIRKKFPKTNISIKTEADKSQVTCYGCNKTGHFKNECPDIK 314
           +D      K+     L + +++K+  K    I+      + + +   +      + P  +
Sbjct: 240 DDGDKSSKKKSGGYKLMK-KLKKEGKKIEAFIEEWDSNEESSPHPGPRKKMVMMQAPGRR 298

Query: 315 K----VQRKPPFKKKAMITWDDMEESDSQEDAD-------TDMGLMAQSDDEEEVIIYKT 363
           +      R+        ++W     S+S +D D         M     +  E+E++ +K 
Sbjct: 299 RWPLLPSRRLHHSSLHFVSWQKAPLSESDDDCDDVSYDELVSMFEELHAYSEKEIVKFKA 358

Query: 364 --------DSLYKDLENKIDSLLYD--------SNFLTNRCHSLIKELS---EIKEEKEI 404
                   + LY++L+   + L            N L+   H  + ++    ++ ++   
Sbjct: 359 LKKDHASLEVLYEELKTSHERLTISHEKLKEAHDNLLSTTQHGALIDVGISCDLLDDSAT 418

Query: 405 LQNKYDESRKTIKILQDSHFDMSEKQREINRKQKGIMSVPSEVQKENILLKKEVETLKKD 464
               Y  S  +I    D   DMS      +     +    + +  EN  LK++V  L K 
Sbjct: 419 FHIAYVAS-SSISTSCDDLVDMSS-----SSSSSCVSICDASLVVENNELKEQVAKLNKR 472

Query: 465 LTGFIKSTETFQNIVGSQNKSTKKSGLGF-----KDPSKIIGSFV-PKAKIRVKCCFCDK 518
           L    K   T   I+  Q     K GLGF     K PS     FV    ++ +   F D 
Sbjct: 473 LERCFKGKNTLDKILSEQRCILNKEGLGFIPKKGKKPSHRATRFVKSNGRLMMVALFLDM 532

Query: 519 YGHNESVCHVKKKFIKQNNLNLSSERSHL---NRSESSQKAEKAKKTCFYCNKSDHKRQN 575
           +    SV            +N  +  SH    +        ++A  T F   +++     
Sbjct: 533 WVPLYSV------------VNYHTGGSHWVLDSGCTQHMTGDRAMFTTFEVGRNEQ---- 576

Query: 576 VTFRKDLLEELTFKDPTLHGLDSGCSRHMTGDRDCFLTFEKKDGGLVTFGNNDKGKIRGK 635
                   E++TF D                                    N KGK+ G 
Sbjct: 577 --------EKVTFGD------------------------------------NSKGKVIGL 592

Query: 636 GTIGNLNSARIENVQYVEGLKHNLLSISQLCDSGFEVIFKPNICEVRQTSSNKLFFSGSR 695
           G I   N   I+NV  V+ L  NLLS++Q+CD      F P    V         F G R
Sbjct: 593 GKIAISNDLSIDNVSLVKSLNFNLLSVAQICDLSLSCAFFPQEVIVSSLLDKSCVFKGFR 652

Query: 696 RKNLYVLELNDMPA--ESCFMSLEKDKWIWHKRAGHISMKTIAKLSQLDLVRGLPKISFE 753
             NLY+++ N   A  ++C ++     W+WH+R  H+ M  ++K S+ DLV GL  + FE
Sbjct: 653 YGNLYLVDFNSSEANLKTCLVAKTSLGWLWHRRLAHVGMNQLSKFSKRDLVMGLKDVKFE 712

Query: 754 KDRICEACVKGKQVKSSFKTIEFISTQKPLELLHIDLFGPVQTASLTGKRYGFVIVDDFS 813
           KD++C AC  GKQV  S  T   +ST KPLELLH+DLF P    S+ G  +  VIVDD+S
Sbjct: 713 KDKLCSACQAGKQVACSHPTKSIMSTSKPLELLHMDLFDPTTYKSIGGNSHCLVIVDDYS 772

Query: 814 RFTWVLFLKHKDESFEAFQNFCKRVQNEKGYNIITVRSDHGGEFENASFKTFFDE 868
           R+TWV FL  K    + F+ F KR QNE    ++ +RS+ G EF+N + + + D+
Sbjct: 773 RYTWVFFLHDKSIVADLFKKFAKRAQNEFSCTLVKIRSNIGSEFKNTNIEDYCDD 827


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.317    0.133    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,517,463,027
Number of Sequences: 2790947
Number of extensions: 110053694
Number of successful extensions: 448721
Number of sequences better than 10.0: 4270
Number of HSP's better than 10.0 without gapping: 1664
Number of HSP's successfully gapped in prelim test: 2734
Number of HSP's that attempted gapping in prelim test: 427915
Number of HSP's gapped (non-prelim): 15732
length of query: 1523
length of database: 848,049,833
effective HSP length: 141
effective length of query: 1382
effective length of database: 454,526,306
effective search space: 628155354892
effective search space used: 628155354892
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)