BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144724.10 - phase: 0 /pseudo
(1449 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q84KB0 Pol protein [Cucumis melo] 350 1e-94
UniRef100_Q6L3S2 Putative retrotransposon protein [Solanum demis... 337 1e-90
UniRef100_Q6UUR9 Putative gag-pol protein [Oryza sativa] 333 2e-89
UniRef100_Q9SK57 Putative retroelement pol polyprotein [Arabidop... 330 1e-88
UniRef100_Q9SUK5 RETROTRANSPOSON like protein [Arabidopsis thali... 322 5e-86
UniRef100_Q6F2D6 Putative polyprotein [Solanum demissum] 318 8e-85
UniRef100_Q60CY4 Putative polyprotein [Solanum tuberosum] 315 5e-84
UniRef100_Q9XE44 Putative retroelement pol polyprotein [Arabidop... 313 3e-83
UniRef100_Q8LNB4 Putative retroelement [Oryza sativa] 311 9e-83
UniRef100_Q8SB03 Putative polyprotein [Oryza sativa] 310 2e-82
UniRef100_Q7X7N4 OSJNBa0019J05.6 protein [Oryza sativa] 310 3e-82
UniRef100_Q6L3Y7 Putative gag-pol polyprotein [Solanum demissum] 309 4e-82
UniRef100_Q6L3Y6 Putative gag-pol polyprotein [Solanum demissum] 309 4e-82
UniRef100_Q8H870 Putative polyprotein [Oryza sativa] 308 6e-82
UniRef100_Q5W704 Hypothetical protein OSJNBa0037H06.5 [Oryza sat... 308 6e-82
UniRef100_Q7FAA8 OSJNBb0115I21.3 protein [Oryza sativa] 308 6e-82
UniRef100_Q7F9H4 OSJNBa0032N05.2 protein [Oryza sativa] 308 6e-82
UniRef100_Q8W5E8 Putative polyprotein [Oryza sativa] 308 6e-82
UniRef100_Q8S669 Putative polyprotein [Oryza sativa] 308 8e-82
UniRef100_Q8LMV8 Putative polyprotein [Oryza sativa] 308 8e-82
>UniRef100_Q84KB0 Pol protein [Cucumis melo]
Length = 923
Score = 350 bits (899), Expect = 1e-94
Identities = 166/285 (58%), Positives = 214/285 (74%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDRD RFTS+FWK LQ A+G++L S+A+HPQTDGQ+ER Q LED+LR C LE G+W
Sbjct: 637 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 696
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
DSHL L+EF YNNSY ++IGMAPFEALYGR CR+ +CW E G + ++GPE+VQ T E ++
Sbjct: 697 DSHLHLMEFAYNNSYQATIGMAPFEALYGRCCRSPVCWGEVGEQRLMGPELVQSTNEAIQ 756
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
I+ +M +QSRQKSY D RRKDLEF+ GD VFL+V P+ GV R + KL+PRF+GP++
Sbjct: 757 KIRSRMHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFE 816
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I ER+G VAYR+ LPP LS +HDVFHVS LRKYVPDPSHV+ + +++ +NL+ P+
Sbjct: 817 ILERIGPVAYRLALPPSLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVE 876
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLF 1439
+ R VKTLR K+IPLV+V+W E TWE E M YP+LF
Sbjct: 877 VLARGVKTLRNKQIPLVKVLWRNHRVEEATWEREDDMRSRYPELF 921
>UniRef100_Q6L3S2 Putative retrotransposon protein [Solanum demissum]
Length = 1602
Score = 337 bits (865), Expect = 1e-90
Identities = 159/288 (55%), Positives = 218/288 (75%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FT++FWKS Q+ LGSK+ LS+A+HPQTDGQ+ERTIQ+LED+LR CV++ W
Sbjct: 1311 ISDRGAQFTAQFWKSFQKGLGSKVSLSTAFHPQTDGQAERTIQTLEDMLRACVIDFKSNW 1370
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D HLPLIEF YNNSYHSSI MAP+EALYGRRCR+ + WFE G ++GP++V Q EKVK
Sbjct: 1371 DDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVK 1430
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE++K +QSRQKSY D RR+ LEF+ D V+L+V+P+ GV R K KL+PR+IGPY+
Sbjct: 1431 VIQERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYR 1490
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I +RVG+VAY + LP L+ +H VFH+S L+K + DPS ++ ++ V+++DNL+ E +P++
Sbjct: 1491 IVQRVGSVAYELELPQELAAVHPVFHISMLKKCIGDPSLILPTESVKIKDNLSYEEVPVQ 1550
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*G 1442
I DR+V+ LR K++ V+V+W E TWE E M + YP LF G
Sbjct: 1551 ILDRQVRRLRTKDVASVKVLWRNQFVEEATWEAEEDMKKRYPHLFESG 1598
>UniRef100_Q6UUR9 Putative gag-pol protein [Oryza sativa]
Length = 552
Score = 333 bits (854), Expect = 2e-89
Identities = 159/290 (54%), Positives = 210/290 (71%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDRD +F S W+SLQ A+G+K+ LS+A+HPQTDGQSERTIQ+LED+LR CVL G W
Sbjct: 261 VSDRDSKFVSMLWQSLQRAMGTKISLSTAFHPQTDGQSERTIQTLEDMLRACVLSWKGNW 320
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
+ HL L+EF YNNSY +SI MAPFEALYGR+C + LCW G R +LGPEIV+QT++KV+
Sbjct: 321 EDHLALVEFAYNNSYQASIKMAPFEALYGRKCVSPLCWESLGERALLGPEIVEQTSKKVQ 380
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
I + M A+QSRQKSY D RR+DLEF GD V LRV+P G+ R + KL+PR+IGP+
Sbjct: 381 EIGQNMLAAQSRQKSYADTRRRDLEFAVGDQVLLRVSPTKGIVRFGTTGKLSPRYIGPFV 440
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I+ RVG++AYR+ LP ++ +HDVFHVS LRKY+ DP H I + + V +LT+E P+R
Sbjct: 441 ITARVGSLAYRLQLPESMNGVHDVFHVSMLRKYLRDPEHKIDLEPIMVEQDLTIECRPVR 500
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKF 1444
I D + +R + I V+V+W + TWELE +M + YP+LF G F
Sbjct: 501 IFDWSERVMRRRTIKYVKVLWTNQSEREATWELEEEMKKKYPELFVDGMF 550
>UniRef100_Q9SK57 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1611
Score = 330 bits (847), Expect = 1e-88
Identities = 155/285 (54%), Positives = 210/285 (73%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDRD RFTS+FWK+ Q+ALG+++ LS+AYHPQTD QSERTIQ+LED+LR CVL+ GG W
Sbjct: 1298 VSDRDTRFTSKFWKAFQKALGTRVNLSTAYHPQTDEQSERTIQTLEDMLRACVLDWGGNW 1357
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
+ +L L+EF YNNS+ +SIGM+P+EALYGR CRT LCW G R + GP IV +TTE++K
Sbjct: 1358 EKYLRLVEFAYNNSFQASIGMSPYEALYGRACRTPLCWTPVGERRLFGPTIVDETTERMK 1417
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
++ K+K +Q RQKSY +KRRK+LEFQ GD V+L+ G GR KKL+PR++GPY+
Sbjct: 1418 FLKIKLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYK 1477
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
+ ERVG VAY++ LPP L+ H+VFHVSQLRK + D ++ +++N+TVE P+R
Sbjct: 1478 VIERVGAVAYKLDLPPKLNAFHNVFHVSQLRKCLSDQEESVEDIPPGLKENMTVEAWPVR 1537
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLF 1439
I DR K RGK L++V+W+ E TWE E+KM ++P+ F
Sbjct: 1538 IMDRMTKGTRGKARDLLKVLWNCRGREEYTWETENKMKANFPEWF 1582
>UniRef100_Q9SUK5 RETROTRANSPOSON like protein [Arabidopsis thaliana]
Length = 687
Score = 322 bits (825), Expect = 5e-86
Identities = 150/285 (52%), Positives = 207/285 (72%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDRD RFTS+FWK Q+ LG+++ LS+AYHPQTDGQSERTIQ+LED+LR CVL+ GG W
Sbjct: 382 VSDRDTRFTSKFWKPFQKVLGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNW 441
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
+ +L L+EF YNNS+ +SIGM+P+EALYGR RT LCW G R + GP +V +TT+K+K
Sbjct: 442 EKYLRLVEFAYNNSFQASIGMSPYEALYGRAGRTPLCWTPVGERRLFGPAVVDETTKKMK 501
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
++ K+K +Q RQKSY +KRRK+LEFQ GD V+L+ G GR KKL PR++GPY+
Sbjct: 502 FLKIKLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLRPRYVGPYK 561
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
+ ERVG VAY++ LPP L H+VFHVSQLRK + + ++ +++N+TVE P+R
Sbjct: 562 VIERVGAVAYKLDLPPKLDAFHNVFHVSQLRKCLSEQEESMEDVPPGLKENMTVEAWPVR 621
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLF 1439
I D+ K RGK + L++++W+ E TWE E+KM ++P+ F
Sbjct: 622 IMDQMKKGTRGKSMDLLKILWNCGGREEYTWETETKMKANFPEWF 666
>UniRef100_Q6F2D6 Putative polyprotein [Solanum demissum]
Length = 1769
Score = 318 bits (815), Expect = 8e-85
Identities = 153/285 (53%), Positives = 205/285 (71%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FW++ QE LG+++ LS+++HPQTDGQSERTIQ LED+LR CV++ GG W
Sbjct: 1479 ISDRGSQFTSSFWRAFQEELGTRVHLSTSFHPQTDGQSERTIQVLEDMLRACVMDFGGQW 1538
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
+ LPL EF YNNSYHSSI MAPFEALYGRRCR+ + WFES G +++Q+ ++V+
Sbjct: 1539 EQFLPLAEFAYNNSYHSSIQMAPFEALYGRRCRSPVGWFESTEPRPRGTDLLQEALDQVR 1598
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQ++++ +QSR +SY D+RR+ L F GD VFLRV+P+ GV R + KL+PR+IGP++
Sbjct: 1599 VIQDRLRTAQSRHQSYADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFE 1658
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I VG VAY + LPP S +H VFHVS LR+YVPD SHV+Q D V++ D LT P+
Sbjct: 1659 ILRTVGEVAYELALPPVFSAIHPVFHVSMLRRYVPDESHVLQYDAVELDDRLTFVEEPVA 1718
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLF 1439
I R V+ LR + IP+V+V W E TWE E +M E +P LF
Sbjct: 1719 ILARDVRRLRSRAIPVVKVRWRHRPVEEATWETEQEMREQFPSLF 1763
>UniRef100_Q60CY4 Putative polyprotein [Solanum tuberosum]
Length = 394
Score = 315 bits (808), Expect = 5e-84
Identities = 153/285 (53%), Positives = 205/285 (71%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS F ++ QE LG+++ LS+A+HPQTDGQSERTIQ LED+LR CV++ GG W
Sbjct: 104 ISDRGSQFTSSFLRAFQEELGTRVHLSTAFHPQTDGQSERTIQVLEDMLRACVMDFGGQW 163
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D LPL EF YNNSYHSSI MAPFEALYGRRC + + WFES + G +++Q+ ++V+
Sbjct: 164 DQFLPLAEFAYNNSYHSSIQMAPFEALYGRRCHSPVGWFESTEPRLRGTDLLQEALDQVR 223
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQ++++ +QSR +SY D+RR+ L F GD VFLRV+P+ GV R + KL+PR+IGP++
Sbjct: 224 VIQDRLRTAQSRHQSYADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFE 283
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I VG VAY + LPP S +H VFHVS LR+YVPD SHV+Q D V++ D LT P+
Sbjct: 284 ILRTVGEVAYELALPPVFSAIHPVFHVSMLRRYVPDESHVLQYDAVELDDRLTFVEEPVA 343
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLF 1439
I R V+ LR + IP+V+V W + E TWE E +M E +P LF
Sbjct: 344 ILARDVRRLRSRAIPVVKVRWRHCSVEEATWETEQEMREQFPGLF 388
>UniRef100_Q9XE44 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 949
Score = 313 bits (801), Expect = 3e-83
Identities = 147/260 (56%), Positives = 196/260 (74%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDRD RFTS+FW + Q+ALG+++ LS+AYHPQTDGQSERTIQ+LED+LR CVL+ GG W
Sbjct: 690 VSDRDTRFTSKFWNAFQKALGTRVNLSTAYHPQTDGQSERTIQTLEDMLRACVLDWGGNW 749
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
+ +L LIEF YNNS+ +SIGM+P+EALYGR CRT LCW G R + GP IV +TTE++K
Sbjct: 750 EKYLRLIEFAYNNSFQASIGMSPYEALYGRACRTPLCWTPVGERRLFGPTIVDETTERMK 809
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
++ K+K +Q RQKSY +KRRK+LEFQ GD V+L+ G GR KKL+PR++GPY+
Sbjct: 810 FLKIKLKEAQDRQKSYANKRRKELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYK 869
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
+ ERVG VAY++ LPP L+ H+VFHVSQLRKY+ D ++ +++N+TVE P+R
Sbjct: 870 VIERVGAVAYKLDLPPKLNVFHNVFHVSQLRKYLSDQEESVEDIPPGLKENMTVEAWPVR 929
Query: 1395 IDDRKVKTLRGKEIPLVRVV 1414
I DR K RGK L++V+
Sbjct: 930 IMDRMSKGTRGKSRDLLKVL 949
>UniRef100_Q8LNB4 Putative retroelement [Oryza sativa]
Length = 518
Score = 311 bits (797), Expect = 9e-83
Identities = 148/292 (50%), Positives = 207/292 (70%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS+FW+ LQ LG++L S+AYHPQTDGQ+ER Q LED+LR CVL+ GG+W
Sbjct: 222 VSDRGSQFTSKFWQKLQLELGTRLNFSTAYHPQTDGQTERVNQILEDMLRACVLDFGGSW 281
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I++Q EKVK
Sbjct: 282 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILRQAEEKVK 341
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSRQKSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GP++
Sbjct: 342 IIQERLRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFK 401
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LPP ++ +HDVFHVSQL+K + P+ D ++++++LT P+R
Sbjct: 402 IVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEEADPDRIELQEDLTYVEKPVR 461
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 462 ILEESERKTRNRVIRFCKVQWSNHSEEEATWEREDELKSAHPHLFASSSESR 513
>UniRef100_Q8SB03 Putative polyprotein [Oryza sativa]
Length = 1473
Score = 310 bits (795), Expect = 2e-82
Identities = 149/292 (51%), Positives = 204/292 (69%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FWK LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 1177 VSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 1236
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 1237 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 1296
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GPY+
Sbjct: 1297 IIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYK 1356
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LP L+ +HDVFHVSQL+K + P+ + ++V+++LT P+R
Sbjct: 1357 IVSRRGEVAYQLELPQSLAGVHDVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIR 1416
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 1417 ILETSERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFASSSESR 1468
>UniRef100_Q7X7N4 OSJNBa0019J05.6 protein [Oryza sativa]
Length = 1616
Score = 310 bits (793), Expect = 3e-82
Identities = 148/292 (50%), Positives = 205/292 (69%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FWK LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 1320 VSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 1379
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 1380 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 1439
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GPY+
Sbjct: 1440 VIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYK 1499
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I+ R G VAY++ LP L+ +H+VFHVSQL+K + P+ + ++V+++LT P+R
Sbjct: 1500 IASRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIR 1559
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 1560 ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESR 1611
>UniRef100_Q6L3Y7 Putative gag-pol polyprotein [Solanum demissum]
Length = 1351
Score = 309 bits (792), Expect = 4e-82
Identities = 145/271 (53%), Positives = 201/271 (73%)
Query: 1172 EALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTWDSHLPLIEFTYNNSYHS 1231
+ LGSK+ LS+A+HPQTDGQ+E TIQ LED+LR CV++ G WD HLPLIEF YNNSYH
Sbjct: 1077 KGLGSKVNLSTAFHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHP 1136
Query: 1232 SIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVKMIQEKMKASQSRQKSYH 1291
SI MAP+EALYGRRCR+ + WFE G ++GP++V Q EKVK+I+E++K +QSRQKSY
Sbjct: 1137 SIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYT 1196
Query: 1292 DKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQISERVGTVAYRVGLPPH 1351
D RR+ LEF+ D V+L+V+P+ GV R K KL+PR+IGPY+I++R+G VAY + LP
Sbjct: 1197 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQE 1256
Query: 1352 LSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLRIDDRKVKTLRGKEIPLV 1411
L+ +H VFH+S L+K + DPS ++ ++ +++ DNL+ E +P++I DR+V+ LR K++ V
Sbjct: 1257 LAAVHPVFHISMLKKCIGDPSLILPTESIKINDNLSYEEVPVQILDRQVRRLRTKDVASV 1316
Query: 1412 RVVWDGATGESLTWELESKMLESYPKLFA*G 1442
+V+W E TWE E M + YP LF G
Sbjct: 1317 KVLWRDQFVEEATWEAEEDMKKKYPYLFESG 1347
>UniRef100_Q6L3Y6 Putative gag-pol polyprotein [Solanum demissum]
Length = 1351
Score = 309 bits (792), Expect = 4e-82
Identities = 145/271 (53%), Positives = 201/271 (73%)
Query: 1172 EALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTWDSHLPLIEFTYNNSYHS 1231
+ LGSK+ LS+A+HPQTDGQ+E TIQ LED+LR CV++ G WD HLPLIEF YNNSYH
Sbjct: 1077 KGLGSKVNLSTAFHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLPLIEFAYNNSYHP 1136
Query: 1232 SIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVKMIQEKMKASQSRQKSYH 1291
SI MAP+EALYGRRCR+ + WFE G ++GP++V Q EKVK+I+E++K +QSRQKSY
Sbjct: 1137 SIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYT 1196
Query: 1292 DKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQISERVGTVAYRVGLPPH 1351
D RR+ LEF+ D V+L+V+P+ GV R K KL+PR+IGPY+I++R+G VAY + LP
Sbjct: 1197 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQE 1256
Query: 1352 LSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLRIDDRKVKTLRGKEIPLV 1411
L+ +H VFH+S L+K + DPS ++ ++ +++ DNL+ E +P++I DR+V+ LR K++ V
Sbjct: 1257 LAAVHPVFHISMLKKCIGDPSLILPTESIKINDNLSYEEVPVQILDRQVRRLRTKDVASV 1316
Query: 1412 RVVWDGATGESLTWELESKMLESYPKLFA*G 1442
+V+W E TWE E M + YP LF G
Sbjct: 1317 KVLWRDQFVEEATWEAEEDMKKKYPYLFESG 1347
>UniRef100_Q8H870 Putative polyprotein [Oryza sativa]
Length = 1715
Score = 308 bits (790), Expect = 6e-82
Identities = 148/292 (50%), Positives = 204/292 (69%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FWK LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 1419 VSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 1478
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 1479 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 1538
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GPY+
Sbjct: 1539 IIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYK 1598
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LP L+ +H+VFHVSQL+K + P+ + ++V+++LT P+R
Sbjct: 1599 IVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIR 1658
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 1659 ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESR 1710
>UniRef100_Q5W704 Hypothetical protein OSJNBa0037H06.5 [Oryza sativa]
Length = 846
Score = 308 bits (790), Expect = 6e-82
Identities = 148/292 (50%), Positives = 204/292 (69%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FWK LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 550 VSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 609
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 610 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 669
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GPY+
Sbjct: 670 IIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYK 729
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LP L+ +H+VFHVSQL+K + P+ + ++V+++LT P+R
Sbjct: 730 IVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVEKPIR 789
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 790 ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESR 841
>UniRef100_Q7FAA8 OSJNBb0115I21.3 protein [Oryza sativa]
Length = 1779
Score = 308 bits (790), Expect = 6e-82
Identities = 148/292 (50%), Positives = 204/292 (69%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FWK LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 1483 VSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 1542
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 1543 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 1602
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GPY+
Sbjct: 1603 VIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYK 1662
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LP L+ +H+VFHVSQL+K + P+ + ++V+++LT P+R
Sbjct: 1663 IVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIEQIEVQEDLTYVEKPIR 1722
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 1723 ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESR 1774
>UniRef100_Q7F9H4 OSJNBa0032N05.2 protein [Oryza sativa]
Length = 1408
Score = 308 bits (790), Expect = 6e-82
Identities = 148/292 (50%), Positives = 204/292 (69%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FWK LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 1112 VSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 1171
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 1172 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 1231
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GPY+
Sbjct: 1232 IIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLAPRFVGPYK 1291
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LP L+ +H+VFHVSQL+K + P+ + ++V+++LT P+R
Sbjct: 1292 IVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVEKPIR 1351
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 1352 ILETNERKTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESR 1403
>UniRef100_Q8W5E8 Putative polyprotein [Oryza sativa]
Length = 1416
Score = 308 bits (790), Expect = 6e-82
Identities = 148/292 (50%), Positives = 203/292 (68%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FWK LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 1120 VSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 1179
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 1180 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 1239
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V++RVTP GV R KL PRF+GPY+
Sbjct: 1240 IIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYIRVTPFRGVHRFHTKGKLAPRFVGPYK 1299
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LP L+ +H+VFHVSQL+K + P+ D ++V+++LT P+R
Sbjct: 1300 IVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLDQIEVQEDLTYVEKPIR 1359
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 1360 ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPHLFASSSESR 1411
>UniRef100_Q8S669 Putative polyprotein [Oryza sativa]
Length = 1680
Score = 308 bits (789), Expect = 8e-82
Identities = 148/292 (50%), Positives = 204/292 (69%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FWK LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 1384 VSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 1443
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 1444 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 1503
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GPY+
Sbjct: 1504 IIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFHTKGKLVPRFVGPYK 1563
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LP L+ +H+VFHVSQL+K + P+ + ++V+++LT P+R
Sbjct: 1564 IVSRRGEVAYQLELPQSLAEVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVEKPIR 1623
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 1624 ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPYLFASSSESR 1675
>UniRef100_Q8LMV8 Putative polyprotein [Oryza sativa]
Length = 1406
Score = 308 bits (789), Expect = 8e-82
Identities = 148/292 (50%), Positives = 204/292 (69%)
Query: 1155 LSDRDPRFTSRFWKSLQEALGSKLRLSSAYHPQTDGQSERTIQSLEDLLRVCVLEQGGTW 1214
+SDR +FTS FW+ LQE +GSKL S+AYHPQTDGQ+ER Q LED+LR C L+ GG+W
Sbjct: 1110 VSDRGSQFTSNFWEKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLRACALDFGGSW 1169
Query: 1215 DSHLPLIEFTYNNSYHSSIGMAPFEALYGRRCRTQLCWFESGGRVVLGPEIVQQTTEKVK 1274
D +LP EF+YNNSY +S+ MAP+EALYGR+CRT L W ++G R V G +I+++ EKVK
Sbjct: 1170 DKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVK 1229
Query: 1275 MIQEKMKASQSRQKSYHDKRRKDLEFQEGDHVFLRVTPVTGVGRALKSKKLTPRFIGPYQ 1334
+IQE+++ +QSR KSY D RR+DL F+EGD+V+LRVTP+ GV R KL PRF+GPY+
Sbjct: 1230 IIQERLRVAQSRYKSYADNRRRDLSFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYK 1289
Query: 1335 ISERVGTVAYRVGLPPHLSNLHDVFHVSQLRKYVPDPSHVIQSDDVQVRDNLTVETLPLR 1394
I R G VAY++ LP L+ +H+VFHVSQL+K + P+ D ++V+++LT P+R
Sbjct: 1290 IVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANIDQIEVQEDLTYVEKPIR 1349
Query: 1395 IDDRKVKTLRGKEIPLVRVVWDGATGESLTWELESKMLESYPKLFA*GKFSR 1446
I + + R + I +V W + E TWE E ++ ++P LFA SR
Sbjct: 1350 ILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPLLFASSSESR 1401
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.362 0.162 0.603
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,881,426,899
Number of Sequences: 2790947
Number of extensions: 65240239
Number of successful extensions: 258248
Number of sequences better than 10.0: 1777
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 516
Number of HSP's that attempted gapping in prelim test: 254901
Number of HSP's gapped (non-prelim): 2394
length of query: 1449
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1309
effective length of database: 457,317,253
effective search space: 598628284177
effective search space used: 598628284177
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (22.0 bits)
S2: 81 (35.8 bits)
Medicago: description of AC144724.10