BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144591.1 - phase: 0
(167 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum] 100 1e-20
UniRef100_Q6WAY5 Gag/pol polyprotein [Pisum sativum] 100 1e-20
UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum] 94 1e-18
UniRef100_Q5XWL3 Gag-pol polyprotein-like [Solanum tuberosum] 52 6e-06
UniRef100_Q6T6V4 Hypothetical protein [Vitis cinerea x Vitis rup... 50 3e-05
UniRef100_Q40369 RPE15 protein [Medicago sativa] 49 5e-05
UniRef100_Q60D62 Putative gag/pol polyprotein, 3'-partial [Solan... 44 0.002
UniRef100_Q8CAZ4 Mus musculus 6 days neonate skin cDNA, RIKEN fu... 44 0.002
UniRef100_Q8VEC8 BRAF35/HDAC2 complex [Mus musculus] 43 0.003
UniRef100_Q80Z33 PFTF1 protein [Mus musculus] 43 0.003
UniRef100_Q6PKB8 Hypothetical protein [Homo sapiens] 43 0.003
UniRef100_Q96RN5-2 Splice isoform 2 of Q96RN5 [Homo sapiens] 43 0.003
UniRef100_Q96RN5 Positive cofactor 2 glutamine/Q-rich-associated... 43 0.003
UniRef100_UPI0000369383 UPI0000369383 UniRef100 entry 41 0.013
UniRef100_Q5R7T8 Hypothetical protein DKFZp459O0325 [Pongo pygma... 41 0.013
UniRef100_Q61RQ6 Hypothetical protein CBG06493 [Caenorhabditis b... 41 0.013
UniRef100_Q6IC31 PCQAP protein [Homo sapiens] 40 0.017
UniRef100_O16393 Hypothetical protein C17E7.4 [Caenorhabditis el... 40 0.029
UniRef100_Q9UPV4 KIAA1048 protein [Homo sapiens] 40 0.029
UniRef100_UPI000023CB04 UPI000023CB04 UniRef100 entry 39 0.038
>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
Length = 1814
Score = 100 bits (249), Expect = 1e-20
Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 58 QFQQRPQPPRQPSFTQ---QPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPE 114
Q QQR Q P+Q Q QPRQ+ P RFD +PM YAE LP LL+ V+ R P P
Sbjct: 385 QQQQRVQQPQQQQQQQRPYQPRQRMPDRRFDSLPMSYAELLPELLRLGMVELRTMAP-PT 443
Query: 115 KLPAGFRADLSCVFHQGAPGHDVERCYALRNAVQDLVEAKILSFTDLNPNL 165
LP G+ A++ C FH GAPGH E+C AL++ VQDL++AK ++F + PN+
Sbjct: 444 VLPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDAKAINFAPV-PNV 493
>UniRef100_Q6WAY5 Gag/pol polyprotein [Pisum sativum]
Length = 1105
Score = 100 bits (249), Expect = 1e-20
Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Query: 58 QFQQRPQPPRQPSFTQ---QPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPE 114
Q QQR Q P+Q Q QPRQ+ P RFD +PM YAE LP LL+ V+ R P P
Sbjct: 385 QQQQRVQQPQQQQQQQRPYQPRQRMPDRRFDSLPMSYAELLPELLRLGMVELRTMAP-PT 443
Query: 115 KLPAGFRADLSCVFHQGAPGHDVERCYALRNAVQDLVEAKILSFTDLNPNL 165
LP G+ A++ C FH GAPGH E+C AL++ VQDL++AK ++F + PN+
Sbjct: 444 VLPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDAKAINFAPV-PNV 493
>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
Length = 2262
Score = 94.4 bits (233), Expect = 1e-18
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 58 QFQQRPQPPRQPSFTQ--QPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEK 115
Q QQR Q P+Q + QPRQ+ P RFD +PM YAE LP LL+ V+ P P
Sbjct: 384 QQQQRVQQPQQQQQQRPYQPRQRMPDRRFDSLPMSYAELLPELLRLGLVELCTMAP-PTV 442
Query: 116 LPAGFRADLSCVFHQGAPGHDVERCYALRNAVQDLVEAKILSFTDLNPNL 165
LP G+ A++ C FH GAPGH E+C AL++ VQDL++A ++F + PN+
Sbjct: 443 LPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDANAINFAPV-PNV 491
>UniRef100_Q5XWL3 Gag-pol polyprotein-like [Solanum tuberosum]
Length = 1716
Score = 52.0 bits (123), Expect = 6e-06
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 77 QQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEKLPAGF-RADLSCVFHQGAPGH 135
++ P F P+ + L Y+ P P+P + F R D C +H + GH
Sbjct: 416 EKKPARNFTPLIKSRTKLFERLTVAGYIH--PVGPKPVDTSSKFYRPDQRCAYHSNSVGH 473
Query: 136 DVERCYALRNAVQDLVEAKILSFTDLNPNLQS 167
D E C L++ +QDL+ ++S + PN+ S
Sbjct: 474 DTEDCINLKHKIQDLINQNVVSLQTVAPNVNS 505
>UniRef100_Q6T6V4 Hypothetical protein [Vitis cinerea x Vitis rupestris]
Length = 248
Score = 49.7 bits (117), Expect = 3e-05
Identities = 28/105 (26%), Positives = 50/105 (46%), Gaps = 2/105 (1%)
Query: 49 SLMVTKDLPQFQQRPQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRP 108
SL ++ P + P P P ++ R F + + + + ++
Sbjct: 109 SLAMSTRPPSRVRGPPVVTVPQGRPHPHRRC-RRHFSDLSIPLSRAFETFQAMGFLAPLA 167
Query: 109 PPPRPEKLPAGFRADLSCVFHQGAPGHDVERCYALRNAVQDLVEA 153
P P+ +P FR DL C++HQ GH +RC ALR+A+QD++++
Sbjct: 168 PRALPDPVPPQFRLDLYCMYHQSV-GHHTDRCTALRHAIQDIIDS 211
>UniRef100_Q40369 RPE15 protein [Medicago sativa]
Length = 219
Score = 48.9 bits (115), Expect = 5e-05
Identities = 30/70 (42%), Positives = 35/70 (49%), Gaps = 18/70 (25%)
Query: 57 PQFQQRPQPPRQPSFT----------------QQPRQQAPR--TRFDPIPMKYAEFLPSL 98
P +QQ P PP QP QQ +QQ PR T F PIPM+YAE LP+L
Sbjct: 130 PFYQQYPLPPGQPPVPVNAMAQQVQHQPPAQQQQQQQQGPRPKTYFPPIPMRYAELLPTL 189
Query: 99 LKGNYVQTRP 108
L + TRP
Sbjct: 190 LAKGHCVTRP 199
>UniRef100_Q60D62 Putative gag/pol polyprotein, 3'-partial [Solanum demissum]
Length = 1784
Score = 43.9 bits (102), Expect = 0.002
Identities = 28/88 (31%), Positives = 42/88 (46%), Gaps = 6/88 (6%)
Query: 81 RTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEKLPAGFRADLS--CVFHQGAPGHDVE 138
+ F PI YA L N + P R P D S C + APGH++E
Sbjct: 889 KDEFTPIGESYASLFQKLRTLNVLS---PIERKMSNPPPRNLDYSQHCAYCSDAPGHNIE 945
Query: 139 RCYALRNAVQDLVEA-KILSFTDLNPNL 165
RC+ L+ A+QDL++ +I+ + PN+
Sbjct: 946 RCWYLKKAIQDLIDTRRIIVESPNGPNI 973
>UniRef100_Q8CAZ4 Mus musculus 6 days neonate skin cDNA, RIKEN full-length enriched
library, clone:A030005M07 product:hypothetical protein,
full insert sequence [Mus musculus]
Length = 604
Score = 43.5 bits (101), Expect = 0.002
Identities = 37/124 (29%), Positives = 61/124 (48%), Gaps = 18/124 (14%)
Query: 6 LSAHMQTLAQTHKMDQ---LEQELHELRKEMTALRAKVEELTNRV-SSLMVTKDLP-QFQ 60
+ H + +AQ + Q L+++LHEL+ ++TAL K + + ++ +L+V ++ P +FQ
Sbjct: 14 IQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRKNLIVKQEQPDKFQ 73
Query: 61 QRP------------QPPRQPSFTQQPRQ-QAPRTRFDPIPMKYAEFLPSLLKGNYVQTR 107
+P Q P QP QQP+Q Q + + + A PSL VQ
Sbjct: 74 IQPLSQSENKLQTAQQQPLQPLQQQQPQQPQQQQQQQQQHAQQSAAAPPSLTASQQVQAT 133
Query: 108 PPPP 111
PP P
Sbjct: 134 PPQP 137
>UniRef100_Q8VEC8 BRAF35/HDAC2 complex [Mus musculus]
Length = 556
Score = 43.1 bits (100), Expect = 0.003
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 6 LSAHMQTLAQTHKMDQ---LEQELHELRKEMTALRAKVEELTNRV-SSLMVTKDLP-QFQ 60
+ H + +AQ + Q L+++LHEL+ ++TAL K + + ++ +L+V ++ P +FQ
Sbjct: 14 IQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRKNLIVKQEQPDKFQ 73
Query: 61 QRP------------QPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRP 108
+P Q P QP QQP+Q + + + + P L + VQ P
Sbjct: 74 IQPLSQSENKLQTAQQQPLQPLQQQQPQQPQQQQQQQQQHAQQSAAAPPSLTASQVQATP 133
Query: 109 PPP 111
P P
Sbjct: 134 PQP 136
>UniRef100_Q80Z33 PFTF1 protein [Mus musculus]
Length = 556
Score = 43.1 bits (100), Expect = 0.003
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 6 LSAHMQTLAQTHKMDQ---LEQELHELRKEMTALRAKVEELTNRV-SSLMVTKDLP-QFQ 60
+ H + +AQ + Q L+++LHEL+ ++TAL K + + ++ +L+V ++ P +FQ
Sbjct: 14 IQVHQKLVAQMKQDPQNADLKKQLHELQAKITALSEKQKRVVEQLRKNLIVKQEQPDKFQ 73
Query: 61 QRP------------QPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRP 108
+P Q P QP QQP+Q + + + + P L + VQ P
Sbjct: 74 IQPLSQSENKLQTAQQQPLQPLQQQQPQQPQQQQQQQQQHAQQSAAAPPSLTASQVQATP 133
Query: 109 PPP 111
P P
Sbjct: 134 PQP 136
>UniRef100_Q6PKB8 Hypothetical protein [Homo sapiens]
Length = 767
Score = 42.7 bits (99), Expect = 0.003
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 8 AHMQTLAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPPR 67
A +Q Q + Q +Q L +L + + ++ R++ L + + Q QQ+ Q +
Sbjct: 221 AVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQ 280
Query: 68 QPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKG-NYVQTRPPPPRPEKLP 117
Q Q P QQ P + P P ++ LP L+ ++ Q PPP+P++ P
Sbjct: 281 QALQAQPPIQQPPMQQPQPPP---SQALPQQLQQMHHTQHHQPPPQPQQPP 328
Score = 35.0 bits (79), Expect = 0.72
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 10 MQTLAQTHKMDQLEQELHELRKEMTALRAK--VEELTNRVSSLMVTKDLPQFQQR----- 62
+Q +AQ Q +Q+ + +++ AL+A+ +++ + ++ LPQ Q+
Sbjct: 257 LQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQ 316
Query: 63 -----PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPP 109
PQP + P QP Q P+++ P+ + A+ LP G + T+PP
Sbjct: 317 HHQPPPQPQQPPVAQNQPSQLPPQSQTQPL-VSQAQALP----GQMLYTQPP 363
>UniRef100_Q96RN5-2 Splice isoform 2 of Q96RN5 [Homo sapiens]
Length = 748
Score = 42.7 bits (99), Expect = 0.003
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 8 AHMQTLAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPPR 67
A +Q Q + Q +Q L +L + + ++ R++ L + + Q QQ+ Q +
Sbjct: 202 AVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQ 261
Query: 68 QPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKG-NYVQTRPPPPRPEKLP 117
Q Q P QQ P + P P ++ LP L+ ++ Q PPP+P++ P
Sbjct: 262 QALQAQPPIQQPPMQQPQPPP---SQALPQQLQQMHHTQHHQPPPQPQQPP 309
Score = 35.0 bits (79), Expect = 0.72
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 10 MQTLAQTHKMDQLEQELHELRKEMTALRAK--VEELTNRVSSLMVTKDLPQFQQR----- 62
+Q +AQ Q +Q+ + +++ AL+A+ +++ + ++ LPQ Q+
Sbjct: 238 LQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQ 297
Query: 63 -----PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPP 109
PQP + P QP Q P+++ P+ + A+ LP G + T+PP
Sbjct: 298 HHQPPPQPQQPPVAQNQPSQLPPQSQTQPL-VSQAQALP----GQMLYTQPP 344
>UniRef100_Q96RN5 Positive cofactor 2 glutamine/Q-rich-associated protein [Homo
sapiens]
Length = 788
Score = 42.7 bits (99), Expect = 0.003
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 8 AHMQTLAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPPR 67
A +Q Q + Q +Q L +L + + ++ R++ L + + Q QQ+ Q +
Sbjct: 202 AVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQ 261
Query: 68 QPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKG-NYVQTRPPPPRPEKLP 117
Q Q P QQ P + P P ++ LP L+ ++ Q PPP+P++ P
Sbjct: 262 QALQAQPPIQQPPMQQPQPPP---SQALPQQLQQMHHTQHHQPPPQPQQPP 309
Score = 35.0 bits (79), Expect = 0.72
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 10 MQTLAQTHKMDQLEQELHELRKEMTALRAK--VEELTNRVSSLMVTKDLPQFQQR----- 62
+Q +AQ Q +Q+ + +++ AL+A+ +++ + ++ LPQ Q+
Sbjct: 238 LQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQ 297
Query: 63 -----PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPP 109
PQP + P QP Q P+++ P+ + A+ LP G + T+PP
Sbjct: 298 HHQPPPQPQQPPVAQNQPSQLPPQSQTQPL-VSQAQALP----GQMLYTQPP 344
>UniRef100_UPI0000369383 UPI0000369383 UniRef100 entry
Length = 735
Score = 40.8 bits (94), Expect = 0.013
Identities = 37/127 (29%), Positives = 56/127 (43%), Gaps = 7/127 (5%)
Query: 11 QTLAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQ-RPQPPR-- 67
Q L Q Q +Q+ + +++ A ++L + ++L + QQ +PQP
Sbjct: 396 QQLMQNFYQQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTVAAGQQPQPQPAAAP 455
Query: 68 QPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEKLPAGFRADLSCV 127
QP+ Q+P QAP R P K P ++G V + PP P+ AG R LS V
Sbjct: 456 QPAPAQEPAIQAP-VRQQP---KVQTTPPPAVQGQKVGSLTPPSSPKTQRAGHRRILSDV 511
Query: 128 FHQGAPG 134
H G
Sbjct: 512 THSAVFG 518
>UniRef100_Q5R7T8 Hypothetical protein DKFZp459O0325 [Pongo pygmaeus]
Length = 566
Score = 40.8 bits (94), Expect = 0.013
Identities = 29/104 (27%), Positives = 50/104 (47%), Gaps = 4/104 (3%)
Query: 15 QTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPPRQPSFTQQ 74
Q + Q +Q L +L + + ++ R++ L + + Q QQ+ Q +Q Q
Sbjct: 126 QQLQQQQQQQHLIKLHHQNQQQIQQQQQQLQRMAQLQLQQQQQQQQQQQQQQQQALQAQP 185
Query: 75 PRQQAPRTRFDPIPMKYAEFLPSLLKG-NYVQTRPPPPRPEKLP 117
P QQ P + P P A+ LP L+ ++ Q PPP+P++ P
Sbjct: 186 PIQQPPMQQPQPPP---AQALPQQLQQMHHTQHHQPPPQPQQPP 226
Score = 34.7 bits (78), Expect = 0.94
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 10 MQTLAQTHKMDQLEQELHELRKEMTALRAK--VEELTNRVSSLMVTKDLPQFQQR----- 62
+Q +AQ Q +Q+ + +++ AL+A+ +++ + + LPQ Q+
Sbjct: 155 LQRMAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPAQALPQQLQQMHHTQ 214
Query: 63 -----PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPP 109
PQP + P QP Q P+++ P+ + A+ LP G + T+PP
Sbjct: 215 HHQPPPQPQQPPVAQNQPSQLPPQSQTQPL-VSQAQALP----GQMLYTQPP 261
>UniRef100_Q61RQ6 Hypothetical protein CBG06493 [Caenorhabditis briggsae]
Length = 413
Score = 40.8 bits (94), Expect = 0.013
Identities = 32/125 (25%), Positives = 54/125 (42%), Gaps = 12/125 (9%)
Query: 1 MSSFNLSAHMQTLAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLP--- 57
MS+ +Q +A +M+QL++E + RKE+ + K E+L NR L +++ P
Sbjct: 184 MSNMAYCTSVQQMASVKQMEQLKKERDQFRKELGRYKTKYEKLENRYEQLGTSQNTPLFG 243
Query: 58 ----QFQQRPQPPRQ---PSFTQQPRQQA--PRTRFDPIPMKYAEFLPSLLKGNYVQTRP 108
F+ + QPP Q P F+ A F P+ L ++ +P
Sbjct: 244 GPGGAFKTQFQPPAQFLTPQFSASSHTFAYPNPPNFKPLSSGGPPSLHHRSMDAFIDIKP 303
Query: 109 PPPRP 113
P +P
Sbjct: 304 PRHQP 308
>UniRef100_Q6IC31 PCQAP protein [Homo sapiens]
Length = 674
Score = 40.4 bits (93), Expect = 0.017
Identities = 28/104 (26%), Positives = 50/104 (47%), Gaps = 4/104 (3%)
Query: 15 QTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPPRQPSFTQQ 74
Q + Q +Q L +L + + ++ R++ L + + Q QQ+ Q +Q Q
Sbjct: 135 QQLQQQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQP 194
Query: 75 PRQQAPRTRFDPIPMKYAEFLPSLLKG-NYVQTRPPPPRPEKLP 117
P QQ P + P P ++ LP L+ ++ Q PPP+P++ P
Sbjct: 195 PIQQPPMQQPQPPP---SQALPQQLQQMHHTQHHQPPPQPQQPP 235
Score = 35.0 bits (79), Expect = 0.72
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 10 MQTLAQTHKMDQLEQELHELRKEMTALRAK--VEELTNRVSSLMVTKDLPQFQQR----- 62
+Q +AQ Q +Q+ + +++ AL+A+ +++ + ++ LPQ Q+
Sbjct: 164 LQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQ 223
Query: 63 -----PQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPP 109
PQP + P QP Q P+++ P+ + A+ LP G + T+PP
Sbjct: 224 HHQPPPQPQQPPVAQNQPSQLPPQSQTQPL-VSQAQALP----GQMLYTQPP 270
>UniRef100_O16393 Hypothetical protein C17E7.4 [Caenorhabditis elegans]
Length = 364
Score = 39.7 bits (91), Expect = 0.029
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 13 LAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLM-VTKDLPQFQ--QRPQPPRQP 69
+A +++QL++E + +KEM +AK E+L ++ L ++ FQ Q Q P P
Sbjct: 190 MASAQQLEQLKKERDQYKKEMRRYKAKCEQLESKCEQLQTMSPSYGAFQSMQNLQNPMLP 249
Query: 70 SFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPP 109
S Q P+ APR+ P P LP +++ + PP
Sbjct: 250 SPFQTPQFPAPRSFAYPNPP-----LPFHRSMDFLNSGPP 284
>UniRef100_Q9UPV4 KIAA1048 protein [Homo sapiens]
Length = 897
Score = 39.7 bits (91), Expect = 0.029
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Query: 10 MQTLAQTHKMDQLEQELHELRKEMTALRAKVEELTNRVSSLMVTKDLPQFQQRPQPPRQP 69
MQ Q + Q +Q+ +L + + ++ + M PQ Q P QP
Sbjct: 562 MQNFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAP--QP 619
Query: 70 SFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEKLPAGFRADLSCVFH 129
+ Q+P QAP R P K P ++G V + PP P+ AG R LS V H
Sbjct: 620 APAQEPAIQAP-VRQQP---KVQTTPPPAVQGQKVGSLTPPSSPKTQRAGHRRILSDVTH 675
Query: 130 QGAPG 134
G
Sbjct: 676 SAVFG 680
>UniRef100_UPI000023CB04 UPI000023CB04 UniRef100 entry
Length = 519
Score = 39.3 bits (90), Expect = 0.038
Identities = 23/59 (38%), Positives = 27/59 (44%)
Query: 57 PQFQQRPQPPRQPSFTQQPRQQAPRTRFDPIPMKYAEFLPSLLKGNYVQTRPPPPRPEK 115
P QQ QPP+ P++TQ Q + P P E L L N V P PP PEK
Sbjct: 301 PHHQQYQQPPQPPAWTQAAPPQPSPAQPPPPPDLLDEPLELALPNNTVAAPPIPPNPEK 359
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.318 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 290,714,451
Number of Sequences: 2790947
Number of extensions: 13283943
Number of successful extensions: 92356
Number of sequences better than 10.0: 599
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 520
Number of HSP's that attempted gapping in prelim test: 90372
Number of HSP's gapped (non-prelim): 1717
length of query: 167
length of database: 848,049,833
effective HSP length: 118
effective length of query: 49
effective length of database: 518,718,087
effective search space: 25417186263
effective search space used: 25417186263
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Medicago: description of AC144591.1