BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144541.14 - phase: 0 
         (63 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q5TYN1 Novel protein [Brachydanio rerio]                     58  6e-08
UniRef100_UPI000034D89F UPI000034D89F UniRef100 entry                  54  1e-06
UniRef100_Q6BFD4 Hypothetical protein [Paramecium tetraurelia]         32  3.3
UniRef100_O74755 SIN3 family co-repressor; involved in transcrip...    32  4.3
UniRef100_UPI00002B84DF UPI00002B84DF UniRef100 entry                  31  9.5
UniRef100_UPI000028A506 UPI000028A506 UniRef100 entry                  31  9.5

>UniRef100_Q5TYN1 Novel protein [Brachydanio rerio]
          Length = 175

 Score = 58.2 bits (139), Expect = 6e-08
 Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)

Query: 4   ERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASF 62
           + SS PVQ+SK+L   K  G + S +SGKKI +K+ K+K+DK+ +  R ELL+FLN+++
Sbjct: 118 DESSGPVQISKYLKEKKKSG-KYSMISGKKIKMKVKKSKKDKQRDKNRAELLDFLNSTY 175


>UniRef100_UPI000034D89F UPI000034D89F UniRef100 entry
          Length = 160

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)

Query: 4   ERSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNAS 61
           E +S PVQ+SK+L   K    + S +SGKKI +K+ K+KEDK+ +  R ELL FLN++
Sbjct: 104 EENSGPVQISKYLKDRKKG--KYSMISGKKIKMKVKKSKEDKKRDKNRAELLEFLNST 159


>UniRef100_Q6BFD4 Hypothetical protein [Paramecium tetraurelia]
          Length = 899

 Score = 32.3 bits (72), Expect = 3.3
 Identities = 18/49 (36%), Positives = 26/49 (52%), Gaps = 2/49 (4%)

Query: 14  KFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASF 62
           K L  NK D   +   S  K +L +D+  +D++  S RN L+N  N SF
Sbjct: 767 KILKTNKQDS--KILTSDNKRILMVDELDKDQDVSSLRNSLVNLSNISF 813


>UniRef100_O74755 SIN3 family co-repressor; involved in transcriptional regulation
          (Predicted); paired amphipathic helix; histone
          deacetylase pathway (Predicted); similar to S. pombe
          pst2 (Paralog); similar to S. cerevisiae YOL004W
          [Schizosaccharomyces pombe]
          Length = 1154

 Score = 32.0 bits (71), Expect = 4.3
 Identities = 17/42 (40%), Positives = 23/42 (54%)

Query: 5  RSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKE 46
          +S SPV  S   G  KD+GV    V  K+IL +   T++D E
Sbjct: 35 QSQSPVNTSLHNGDGKDNGVATEPVENKQILSERSVTRDDYE 76


>UniRef100_UPI00002B84DF UPI00002B84DF UniRef100 entry
          Length = 174

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 19/58 (32%), Positives = 27/58 (45%)

Query: 5   RSSSPVQLSKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDKEAESKRNELLNFLNASF 62
           RSSS    S     +     R   +SGK I LK   ++ D   ES R + L  LN+++
Sbjct: 117 RSSSSSSSSSSSSESSSSERRYDHISGKVIKLKRKSSRVDDRLESNRLKTLKLLNSAY 174


>UniRef100_UPI000028A506 UPI000028A506 UniRef100 entry
          Length = 156

 Score = 30.8 bits (68), Expect = 9.5
 Identities = 17/45 (37%), Positives = 27/45 (59%), Gaps = 1/45 (2%)

Query: 2  NGERSSSPVQL-SKFLGRNKDDGVRRSAVSGKKILLKLDKTKEDK 45
          NGE+S   V + +KFLG   D  +RR+ + G+K+  K+ K  + K
Sbjct: 25 NGEKSLVVVDVKNKFLGTISDGDIRRALLKGQKLSSKITKYFQKK 69


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.307    0.129    0.336 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,189,843
Number of Sequences: 2790947
Number of extensions: 3067054
Number of successful extensions: 9244
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9238
Number of HSP's gapped (non-prelim): 6
length of query: 63
length of database: 848,049,833
effective HSP length: 39
effective length of query: 24
effective length of database: 739,202,900
effective search space: 17740869600
effective search space used: 17740869600
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 68 (30.8 bits)