BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144513.4 - phase: 0 /pseudo
         (1015 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8IBB7 Integral membrane protein, conserved [Plasmodiu...    41  0.21
UniRef100_UPI0000466930 UPI0000466930 UniRef100 entry                  39  1.0
UniRef100_Q6NHE8 Putative peptide transport protein [Corynebacte...    38  1.4
UniRef100_Q600S9 Putative membrane lipoprotein [Mycoplasma hyopn...    38  1.4
UniRef100_UPI000033ED85 UPI000033ED85 UniRef100 entry                  38  1.8
UniRef100_Q9G8P5 NADH dehydrogenase subunit 4 [Naegleria gruberi]      38  1.8
UniRef100_Q61FH4 Hypothetical protein CBG11630 [Caenorhabditis b...    37  2.3
UniRef100_Q6L0J3 Signal peptidase I [Picrophilus torridus]             37  3.0
UniRef100_UPI000046C059 UPI000046C059 UniRef100 entry                  36  5.2
UniRef100_Q7YHM3 NADH dehydrogenase subunit 2 [lepidopsocid RS-2...    36  5.2

>UniRef100_Q8IBB7 Integral membrane protein, conserved [Plasmodium falciparum]
          Length = 505

 Score = 40.8 bits (94), Expect = 0.21
 Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 27/150 (18%)

Query: 611 YSPEASDKGTLFLLIYSFYVLKCYLV*FRKVGIRVTFMVSKLLLMPPALLTFFMQMAIFS 670
           +SP    K  +F  + SF  +  Y++ F K+ IR   + S +++ P            F 
Sbjct: 292 FSPNLLGKMAMFQSLASFISIISYMLFFTKIDIRKLLLYSTIIITP------------FC 339

Query: 671 FVRLTLMRPLLYPTFFLNTKLFLARKLILISQIWSLAQIPVLVL-----------KIYSE 719
            + L +++ + Y  F  NT LF     +LI  I     +P+LVL            IYS 
Sbjct: 340 LLPLVVIKKVNYFLFIPNT-LFFITDTVLIEFIAEFQTMPILVLCSRLIPEGFESTIYSL 398

Query: 720 LISLSTSRIIFLSIWGFLLSLEDLKLKILS 749
           L+S +    I  S   FL SL    L I S
Sbjct: 399 LLSSNNFASIISS---FLSSLLTYSLNITS 425


>UniRef100_UPI0000466930 UPI0000466930 UniRef100 entry
          Length = 448

 Score = 38.5 bits (88), Expect = 1.0
 Identities = 35/145 (24%), Positives = 61/145 (41%), Gaps = 29/145 (20%)

Query: 611 YSPEASDKGTLFLLIYSFYVLKCYLV*FRKVGIRVTFMVSKLLLMPPALLTFFMQMAIFS 670
           ++P+   K ++F  + S   +  Y++   K+ I+   + S +++ P +LL       I  
Sbjct: 292 FTPKLLGKISMFQSLASLLAILLYMLILNKINIKKLLLYSTIVIAPFSLLPLLAVQKI-- 349

Query: 671 FVRLTLMRPLLYPTFFLNTKLFLARKLILISQIWSLAQIPVLVLKIYSELISLSTSRII- 729
                          F+   LF+    IL+  I  L  IP+LV            SRII 
Sbjct: 350 -------------NIFIPNTLFIITDTILVEFIGELQSIPILV----------ECSRIIP 386

Query: 730 ---FLSIWGFLLSLEDLKLKILSLL 751
                +I+ FLLS+ +  + I SL+
Sbjct: 387 EGFESTIYSFLLSVNNFAIMISSLI 411


>UniRef100_Q6NHE8 Putative peptide transport protein [Corynebacterium diphtheriae]
          Length = 498

 Score = 38.1 bits (87), Expect = 1.4
 Identities = 40/134 (29%), Positives = 64/134 (46%), Gaps = 22/134 (16%)

Query: 646 TFMVSKLLLMPPALLTFFMQMAIFSFVRLTLMRPLLYPTFFLNTKLFLARKLILISQI-- 703
           TF V+  L+ P  L TF + + + + +       LLY + F ++++ LA K+ L+  I  
Sbjct: 249 TFCVATGLIKPVVLATFLLALTLGAAL-------LLYTSMFRSSEVTLAEKIQLLRYIPI 301

Query: 704 -------WSLAQIPVLVLKIYSELISLSTSRIIFLSIWGFLLSLEDLKLKILSL----LW 752
                  W++      VL +YS+ + L+ S   FL    +L SL    + ILSL    LW
Sbjct: 302 FLASVAFWAIMNQTYGVLAVYSD-VRLNRSVGDFLIPAAWLQSLNPFYVFILSLPLAYLW 360

Query: 753 IEFG-KS*RALIKL 765
           +  G +S R   KL
Sbjct: 361 LRLGDRSPRPATKL 374


>UniRef100_Q600S9 Putative membrane lipoprotein [Mycoplasma hyopneumoniae]
          Length = 411

 Score = 38.1 bits (87), Expect = 1.4
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 20/150 (13%)

Query: 613 PEASD--KGTLFLLIYSFYVLKCYLV*-FRKV--GIRVTFMVSKLLLMPPALLTFFMQMA 667
           PEA+D  K  + L IY  +V+  + +  F+K   G+   F +   +  P        Q+ 
Sbjct: 152 PEANDFRKWLVNLGIYQIFVISGFHINLFKKAIFGVSKAFKIKPFIYKPIFFAFLLFQLF 211

Query: 668 IFSFVRLTLMRPLLYPTFFLNTKLFLARKLILISQIWSLAQIPVLVLKIYSELISLSTSR 727
           +F+F  ++ +R  ++ +     KLFL +KL  I             L   S ++ LST+ 
Sbjct: 212 LFNFA-VSFLRGFIFWSLIEINKLFLNKKLNKIE------------LLSISGIVILSTNP 258

Query: 728 IIFLSIWGFLLSLEDLKLKILSLLWIEFGK 757
           +IF SI GF+L+   +   IL +  I F K
Sbjct: 259 LIFYSI-GFVLTF-TISFVILIINQISFSK 286


>UniRef100_UPI000033ED85 UPI000033ED85 UniRef100 entry
          Length = 316

 Score = 37.7 bits (86), Expect = 1.8
 Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 41/171 (23%)

Query: 582 SYFHGIYYYEMY*I---SLFLYSYQWQSY*SIYSPEASDKGTLFLLIYSFYVLKCYLV*F 638
           +YF+G  Y  +  +   +L LYSY  +                  L+YS Y+L   L  F
Sbjct: 36  AYFYGALYGALVILLVYNLVLYSYLKERR---------------YLLYSLYLLSFLLFNF 80

Query: 639 RKVGIRVTFMVSKLLLMPPALLTFFMQMAIFSFVRLTLMRPLLYPTFFLNTKLFL----- 693
              G    ++ S+ + +   LL   M + +FS VR T+         FLNT+L+L     
Sbjct: 81  TYTGHGFWWLWSESIFLQQWLLPALMFLYLFSAVRFTIE--------FLNTQLYLPTLYR 132

Query: 694 ARKLILISQIWSLAQIPVLV----LKIYSELISLSTSRIIFLSIWGFLLSL 740
            RK I    + +LA I VL+      + S+L  L+T     ++IW  L+ +
Sbjct: 133 CRKYI-YGALGALAVIIVLIGSRSFAVMSQLAVLTT-----IAIWMLLIGI 177


>UniRef100_Q9G8P5 NADH dehydrogenase subunit 4 [Naegleria gruberi]
          Length = 474

 Score = 37.7 bits (86), Expect = 1.8
 Identities = 33/134 (24%), Positives = 57/134 (41%), Gaps = 9/134 (6%)

Query: 581 FSYFHGIYYYEMY*ISLFLYSYQWQSY*SIYSPEASDKGTLFLLIYSFYVLKCYLV*FRK 640
           FSY    +Y+++  I  F+++  W  + S + P       + L  YSF         F  
Sbjct: 10  FSYNSKYFYFDISLIIFFIFNIVWVLFDS-FEPSFQFIQYINLFEYSFL--------FGI 60

Query: 641 VGIRVTFMVSKLLLMPPALLTFFMQMAIFSFVRLTLMRPLLYPTFFLNTKLFLARKLILI 700
            GI + F+     L+P  LL  F  M       + + +  L+ T FL   +F A  +++ 
Sbjct: 61  DGISIFFIYLSTFLIPLCLLFSFYNMKQKGVSEVKMYQSFLFLTLFLLIFVFSALDILVF 120

Query: 701 SQIWSLAQIPVLVL 714
             ++ +  IP  VL
Sbjct: 121 YIMFEIILIPFFVL 134


>UniRef100_Q61FH4 Hypothetical protein CBG11630 [Caenorhabditis briggsae]
          Length = 273

 Score = 37.4 bits (85), Expect = 2.3
 Identities = 49/165 (29%), Positives = 73/165 (43%), Gaps = 22/165 (13%)

Query: 618 KGTLFLLIYSFYVLKCYLV*FRKVGIRVTFM--VSKLLLMPPALLTFFMQMAIFSFVRLT 675
           K T FLL   F V    L  F    IR++ +  +S +  +P  L        I   + L 
Sbjct: 13  KKTYFLL---FLVFVDVLGIFSSTAIRISLIGTISTICFIPIFLCLHTATQVIQLLISLV 69

Query: 676 LMRPLLYPTF-FLNTKLFLARKLILISQIWSLAQIPVL---------VLKIYSELISLST 725
            +R  L   F  L  K+  A+K ILI++IW L  +  +         ++   +  IS+S 
Sbjct: 70  AIRKFLMHFFPSLIPKILNAQK-ILINKIWILYLLLFINDIVGYAYHIISSRNIYISVSI 128

Query: 726 SRIIFLSIWGFLLSLEDLKLKILSLLWIEFGKS*RALIKLWKEKK 770
            R+  LSI+ +LL   +  L I SLL+         LI LW +KK
Sbjct: 129 LRVSILSIFQYLLISMNGVLLISSLLYFP------VLISLWCKKK 167


>UniRef100_Q6L0J3 Signal peptidase I [Picrophilus torridus]
          Length = 399

 Score = 37.0 bits (84), Expect = 3.0
 Identities = 34/122 (27%), Positives = 60/122 (48%), Gaps = 15/122 (12%)

Query: 616 SDKGTLFLLIYSFYVLKCYLV*FRKVGIRVTFMVSKLLLMPPALLTFFMQMAIFSFVRLT 675
           S KG L+ LI  F +L+  +  F+K  I++ F+++ +    P +L + + +A FSF    
Sbjct: 52  SYKGILYALILIFIILEPAIA-FKK--IKLIFIINAI----PNILLYSLILA-FSF---- 99

Query: 676 LMRPLLYPTFFLNTKLFLARKLILISQIWSLAQIPVLVLKIYSELISLSTSRIIFLSIWG 735
               +L+     + K    R + L S I++L+ +P         L SL    ++FL + G
Sbjct: 100 ---SMLFLVITRSNKKAAVRNIFLSSVIFALSSVPYSAYMDVKNLFSLILFELLFLILAG 156

Query: 736 FL 737
           FL
Sbjct: 157 FL 158


>UniRef100_UPI000046C059 UPI000046C059 UniRef100 entry
          Length = 388

 Score = 36.2 bits (82), Expect = 5.2
 Identities = 36/145 (24%), Positives = 62/145 (41%), Gaps = 29/145 (20%)

Query: 611 YSPEASDKGTLFLLIYSFYVLKCYLV*FRKVGIRVTFMVSKLLLMPPALLTFFMQMAIFS 670
           ++P+   K ++F  + S   +  Y++   KV I+   + S +++ P +LL     +AI  
Sbjct: 232 FTPKLLGKISMFQSLASLLAILLYMLILSKVNIKKLLLYSTIIIAPFSLLPL---LAIHK 288

Query: 671 FVRLTLMRPLLYPTFFLNTKLFLARKLILISQIWSLAQIPVLVLKIYSELISLSTSRII- 729
                          F+   LF+    IL+  I  L  IP+LV            SRII 
Sbjct: 289 I------------NIFIPNTLFIITDTILVEFIGELQSIPILV----------QCSRIIP 326

Query: 730 ---FLSIWGFLLSLEDLKLKILSLL 751
                +I+ FLLS+ +  + I S +
Sbjct: 327 EGFESTIYSFLLSVNNFAVMISSFI 351


>UniRef100_Q7YHM3 NADH dehydrogenase subunit 2 [lepidopsocid RS-2001]
          Length = 344

 Score = 36.2 bits (82), Expect = 5.2
 Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 18/154 (11%)

Query: 596 SLFLYSYQWQSY*SIYSPEASDKGTLFLLIYSFYVLKCYLV*FRKVGIRVTFMVSKLLLM 655
           S+ L  Y    Y  IYS        +F   + FY+ + Y + ++K+ I +   +  L  +
Sbjct: 195 SMILSKYILILYFLIYSFINFTLIMIFNNFFLFYINQSYFILYKKMNIFLFLSLLSLGGL 254

Query: 656 PPALLTFFMQMAIFSFVRLTLMRPLLYPTFFLNTKLFLARKLILISQIWSLAQIPVLVLK 715
           PP LL FF +  I        +  ++Y   ++   + +   LI I     ++   +L+LK
Sbjct: 255 PP-LLGFFPKWLI--------IEKMMYSNLYMLNFILILTSLITIFYYLQISFSSILLLK 305

Query: 716 IYSELISLSTSRII---------FLSIWGFLLSL 740
           + +++I  +   II         F+SI G +L L
Sbjct: 306 LENKIIMNNMKNIINSMFLNICTFISILGLVLFL 339


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.368    0.167    0.619 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,374,244,340
Number of Sequences: 2790947
Number of extensions: 48776351
Number of successful extensions: 313424
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 313404
Number of HSP's gapped (non-prelim): 30
length of query: 1015
length of database: 848,049,833
effective HSP length: 138
effective length of query: 877
effective length of database: 462,899,147
effective search space: 405962551919
effective search space used: 405962551919
T: 11
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 80 (35.4 bits)