BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144513.18 + phase: 0
(107 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8L770 ATP-dependent Clp protease proteolytic subunit ... 75 5e-13
UniRef100_Q67XY5 ClpP protease complex subunit ClpR3 [Arabidopsi... 75 5e-13
UniRef100_O04018 F7G19.1 protein [Arabidopsis thaliana] 75 5e-13
UniRef100_UPI00002592C0 UPI00002592C0 UniRef100 entry 35 0.32
UniRef100_UPI000042E074 UPI000042E074 UniRef100 entry 33 1.6
UniRef100_Q86AG3 Similar to Orgyia pseudotsugata multicapsid pol... 33 1.6
UniRef100_Q6FNG2 Similarities with sp|P08640 Saccharomyces cerev... 33 1.6
UniRef100_UPI000023DA28 UPI000023DA28 UniRef100 entry 33 2.1
UniRef100_UPI00002360C9 UPI00002360C9 UniRef100 entry 33 2.1
UniRef100_O76296 HeRunt-1 [Heliocidaris erythrogramma] 33 2.1
UniRef100_Q6FK94 Similarities with sp|P08640 Saccharomyces cerev... 33 2.1
UniRef100_UPI000036CDF2 UPI000036CDF2 UniRef100 entry 32 2.7
UniRef100_UPI00003AF4A0 UPI00003AF4A0 UniRef100 entry 32 2.7
UniRef100_UPI000042C5C1 UPI000042C5C1 UniRef100 entry 32 2.7
UniRef100_UPI00002D45C7 UPI00002D45C7 UniRef100 entry 32 2.7
UniRef100_UPI00002AEAEF UPI00002AEAEF UniRef100 entry 32 2.7
UniRef100_UPI000029BBC5 UPI000029BBC5 UniRef100 entry 32 2.7
UniRef100_Q5ZLV7 Hypothetical protein [Gallus gallus] 32 2.7
UniRef100_P72605 Slr1484 protein [Synechocystis sp.] 32 2.7
UniRef100_Q6BJG5 Similar to CA0873|CaBUL1 Candida albicans CaBUL... 32 2.7
>UniRef100_Q8L770 ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
Length = 330
Score = 74.7 bits (182), Expect = 5e-13
Identities = 50/110 (45%), Positives = 65/110 (58%), Gaps = 18/110 (16%)
Query: 1 MATCFRVPISMPTSMPASSTRFTP-----------TRLRTLR-TVNAISKSKIPF---NP 45
MA+C + SM + +P SS+ F+P L+T R A + +KIP NP
Sbjct: 1 MASCLQA--SMNSLLPRSSS-FSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINP 57
Query: 46 NDPFLSKLASVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQVSNS 95
DPFLS LAS+A +SPE L N + D P+LDIFDSPQLM++PAQV S
Sbjct: 58 KDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERS 107
>UniRef100_Q67XY5 ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 330
Score = 74.7 bits (182), Expect = 5e-13
Identities = 50/110 (45%), Positives = 65/110 (58%), Gaps = 18/110 (16%)
Query: 1 MATCFRVPISMPTSMPASSTRFTP-----------TRLRTLR-TVNAISKSKIPF---NP 45
MA+C + SM + +P SS+ F+P L+T R A + +KIP NP
Sbjct: 1 MASCLQA--SMNSLLPRSSS-FSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINP 57
Query: 46 NDPFLSKLASVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQVSNS 95
DPFLS LAS+A +SPE L N + D P+LDIFDSPQLM++PAQV S
Sbjct: 58 KDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERS 107
>UniRef100_O04018 F7G19.1 protein [Arabidopsis thaliana]
Length = 292
Score = 74.7 bits (182), Expect = 5e-13
Identities = 50/110 (45%), Positives = 65/110 (58%), Gaps = 18/110 (16%)
Query: 1 MATCFRVPISMPTSMPASSTRFTP-----------TRLRTLR-TVNAISKSKIPF---NP 45
MA+C + SM + +P SS+ F+P L+T R A + +KIP NP
Sbjct: 1 MASCLQA--SMNSLLPRSSS-FSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINP 57
Query: 46 NDPFLSKLASVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQVSNS 95
DPFLS LAS+A +SPE L N + D P+LDIFDSPQLM++PAQV S
Sbjct: 58 KDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERS 107
>UniRef100_UPI00002592C0 UPI00002592C0 UniRef100 entry
Length = 288
Score = 35.4 bits (80), Expect = 0.32
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 7 VPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAES-SPETLF 65
+P PT+ P+S PT L TL A S + P L+ A+ + S S E
Sbjct: 155 LPTLAPTAAPSSVPSMEPTSLPTLAPTLAPSSVPSMEPTSLPTLAPTAAPSMSPSLEPTI 214
Query: 66 NPSSSPDNLPFLDIFDSPQLMATPA 90
PS++P LP SP L+ TPA
Sbjct: 215 APSAAPSLLPTAAPSASPTLLPTPA 239
>UniRef100_UPI000042E074 UPI000042E074 UniRef100 entry
Length = 838
Score = 33.1 bits (74), Expect = 1.6
Identities = 24/82 (29%), Positives = 33/82 (39%), Gaps = 2/82 (2%)
Query: 8 PISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNP 67
PIS P + + S + TPT T T KS P S L SP+
Sbjct: 39 PISAPATKESVSAKPTPTP--TAPTTGVAPKSSPLITPLTASQSNLTKTTSISPQLSKAK 96
Query: 68 SSSPDNLPFLDIFDSPQLMATP 89
S+ P P I +P+L++ P
Sbjct: 97 SNQPSQPPCKQIKTNPKLLSNP 118
>UniRef100_Q86AG3 Similar to Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV). Hypothetical 29.3 kDa protein [Dictyostelium
discoideum]
Length = 762
Score = 33.1 bits (74), Expect = 1.6
Identities = 29/101 (28%), Positives = 41/101 (39%), Gaps = 4/101 (3%)
Query: 6 RVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLF 65
+ P S PTS P S TPT+ T S ++ P + P S +S S T
Sbjct: 601 QTPSSTPTSSPTSLPTSTPTQTPTSSPTPTSSPTQTPTSSPTPTSSPTSSPTSSPTPT-- 658
Query: 66 NPSSSPDNLPFLDIFDSPQLMATPAQVSNSNFSFHFLQIEE 106
P+ + + SP +M TP S S S H + +E
Sbjct: 659 -PTQTQTQTLNPNPTTSPSIMPTPTYTS-SEISSHEIPKKE 697
>UniRef100_Q6FNG2 Similarities with sp|P08640 Saccharomyces cerevisiae YIR019c STA1
[Candida glabrata]
Length = 958
Score = 33.1 bits (74), Expect = 1.6
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 7 VPISMPTSMPASSTRFTPTRLRTL--RTVNAISKSKIPFN---------PNDPFLSKLAS 55
+P SMP+SMP+S P+ + + ++ + S IP + P+ S +S
Sbjct: 418 IPSSMPSSMPSSMPSSIPSSMPSSMPSSIPSSIPSSIPSSMPSSMPGSMPSSIPSSMPSS 477
Query: 56 VAESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQVSNSNFS 98
+ S P ++ PSS P ++P P + P+ VSN + S
Sbjct: 478 IPSSMPSSI--PSSIPSSMPSSMPSSMPSSVIKPSTVSNHSSS 518
>UniRef100_UPI000023DA28 UPI000023DA28 UniRef100 entry
Length = 595
Score = 32.7 bits (73), Expect = 2.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 26 RLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNPSSSPD 72
R+R+L + + S P P +PF A+VA SP T SPD
Sbjct: 470 RMRSLLSARPVLGSDFPVEPPNPFQGIYAAVARRSPHTGRGTDESPD 516
>UniRef100_UPI00002360C9 UPI00002360C9 UniRef100 entry
Length = 391
Score = 32.7 bits (73), Expect = 2.1
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 17 ASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNPSSSPDNLP 75
A T P +L ++RT++ S+ P PN ++ + S A + + NPS+ + +P
Sbjct: 291 AHDTDSGPLKLLSIRTIDPPSRLTQPGIPNSENIATVGSTAAAEESLIINPSTGEEEVP 349
>UniRef100_O76296 HeRunt-1 [Heliocidaris erythrogramma]
Length = 536
Score = 32.7 bits (73), Expect = 2.1
Identities = 18/66 (27%), Positives = 33/66 (49%), Gaps = 1/66 (1%)
Query: 12 PTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPND-PFLSKLASVAESSPETLFNPSSS 70
P++ SS FT + + L + ++ +P PN P + S + S+P TL +P
Sbjct: 327 PSTPAVSSVSFTTSSMSVLSSGGESPRTILPMTPNPFPLSQDIFSSSSSTPVTLTSPPYL 386
Query: 71 PDNLPF 76
P++ P+
Sbjct: 387 PNSPPY 392
>UniRef100_Q6FK94 Similarities with sp|P08640 Saccharomyces cerevisiae YIR019c STA1
[Candida glabrata]
Length = 922
Score = 32.7 bits (73), Expect = 2.1
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 7 VPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFN 66
+P S+P+SMP+S P+ + TV+ S S P+ S +S+ S P ++
Sbjct: 418 MPSSIPSSMPSSIPSSMPSSVIKPSTVSNHSSS----IPSSIPSSMPSSIPSSIPSSM-- 471
Query: 67 PSSSPDNLPFLDIFDSPQLMATPAQVSNSNFS 98
PSS P ++P P + P+ VSN + S
Sbjct: 472 PSSMPSSIP----SSMPSSVIKPSTVSNHSSS 499
Score = 32.7 bits (73), Expect = 2.1
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 7 VPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFN 66
+P S+P+S+P+S P+ + + + I S + + + S +S+ S P ++
Sbjct: 459 MPSSIPSSIPSSMPSSMPSSIPSSMPSSVIKPSTVSNHSSSMPSSIPSSMPSSMPSSVIK 518
Query: 67 P-------SSSPDNLPFLDIFDSPQLMATPAQVSNSNFS 98
P SS P ++P P + P+ VSN + S
Sbjct: 519 PSTVSNHSSSMPSSIPSSIPSSMPSSVIKPSTVSNHSSS 557
>UniRef100_UPI000036CDF2 UPI000036CDF2 UniRef100 entry
Length = 465
Score = 32.3 bits (72), Expect = 2.7
Identities = 15/58 (25%), Positives = 29/58 (49%)
Query: 4 CFRVPISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSP 61
C + +S + +TRF PTR ++ TV + + F+PND ++ + ++P
Sbjct: 374 CPFIKVSSYDELELKTTRFHPTRQSSMYTVTRMESMTVVFDPNDADTTRSSRKKRATP 431
>UniRef100_UPI00003AF4A0 UPI00003AF4A0 UniRef100 entry
Length = 210
Score = 32.3 bits (72), Expect = 2.7
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 14 SMPASSTR----FTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNPS 68
S P+SST PTR+ +L+ N SK + + P +S AS+A+SS L PS
Sbjct: 95 SKPSSSTNRLSLARPTRVSSLQAANTERSSKQVRSASTPKISSAASLAKSSASVLTVPS 153
>UniRef100_UPI000042C5C1 UPI000042C5C1 UniRef100 entry
Length = 444
Score = 32.3 bits (72), Expect = 2.7
Identities = 18/56 (32%), Positives = 28/56 (49%), Gaps = 5/56 (8%)
Query: 20 TRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNPSSSPDNLP 75
TRF PT R + V SK +IP + ++ + + P LF+P +S D +P
Sbjct: 274 TRFAPTYKRIVGQVEGYSKKRIP-----GWTDRILFASHTDPPHLFSPEASLDPVP 324
>UniRef100_UPI00002D45C7 UPI00002D45C7 UniRef100 entry
Length = 245
Score = 32.3 bits (72), Expect = 2.7
Identities = 30/96 (31%), Positives = 38/96 (39%), Gaps = 12/96 (12%)
Query: 2 ATCFRVPISMP------TSMPASS-TRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSK-L 53
+TC+ P P TS P+ S T + TR TLR S P+ DP L
Sbjct: 25 STCYPTPYPSPYLSPYPTSYPSPSPTAYPSTRPPTLRP----SHYPTPYPTRDPTAGPTL 80
Query: 54 ASVAESSPETLFNPSSSPDNLPFLDIFDSPQLMATP 89
+ A +P PS +P N P D P L P
Sbjct: 81 SPTAYPTPGPTVYPSPAPTNFPTSSPTDYPTLSPHP 116
>UniRef100_UPI00002AEAEF UPI00002AEAEF UniRef100 entry
Length = 276
Score = 32.3 bits (72), Expect = 2.7
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 7 VPISMPTSMPASSTRFTPTRLRTLRT--VNAISKSKIPFNPNDPFLSKLASV-AESSPET 63
VP + PTS+P P+ + TL V + S +P P S S+ +SP
Sbjct: 97 VPSAAPTSLPTLVPSLGPSSVPTLEPSGVPTLEPSALPTLPPTELPSGTPSLQPTASPSA 156
Query: 64 LFNPSSSPDNLPFLDIFDSPQLMAT 88
L PS SP LP L SP L T
Sbjct: 157 L--PSLSPSGLPSLAPSASPTLSPT 179
>UniRef100_UPI000029BBC5 UPI000029BBC5 UniRef100 entry
Length = 1363
Score = 32.3 bits (72), Expect = 2.7
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 8 PISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNP 67
P+S+P++ P S R T L + + P +PN P LA+ + E +P
Sbjct: 632 PVSLPSTPPKSHYRANGTYLHPV--------TGKPLDPNSPLALALAARDRAMKEQQNHP 683
Query: 68 SSSPDNLPFLDIFDSPQLMATPAQVSN 94
+ P N P + + + P Q S+
Sbjct: 684 QNQPQNPPQVPQAPKHEAQSLPVQPSH 710
>UniRef100_Q5ZLV7 Hypothetical protein [Gallus gallus]
Length = 724
Score = 32.3 bits (72), Expect = 2.7
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 14 SMPASSTR----FTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNPS 68
S P+SST PTR+ +L+ N SK + + P +S AS+A+SS L PS
Sbjct: 371 SKPSSSTNRLSLARPTRVSSLQAANTERSSKQVRSASTPKISSAASLAKSSASVLTVPS 429
>UniRef100_P72605 Slr1484 protein [Synechocystis sp.]
Length = 532
Score = 32.3 bits (72), Expect = 2.7
Identities = 25/84 (29%), Positives = 37/84 (43%), Gaps = 9/84 (10%)
Query: 8 PISMPTSMPASSTRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNP 67
PIS+P S+P P + +L AI+ P P L+ L + SP +L P
Sbjct: 125 PISLPNSLPPPPAAPVPNAV-SLPVDQAIT-------PPTPNLNPLPNPVTESPASLTQP 176
Query: 68 SSSPDNLPFLDIFDSPQLMATPAQ 91
+ S LPF + +P+ P Q
Sbjct: 177 AQSAFRLPFSSL-QTPEFAPIPEQ 199
>UniRef100_Q6BJG5 Similar to CA0873|CaBUL1 Candida albicans CaBUL1 Ubiquitin ligase
binding protein [Debaryomyces hansenii]
Length = 933
Score = 32.3 bits (72), Expect = 2.7
Identities = 22/91 (24%), Positives = 42/91 (45%), Gaps = 9/91 (9%)
Query: 10 SMPTSMPASS--TRFTPTRLRTLRTVNAISKSKIPFNPNDPFLSKLASVAESSPETLFNP 67
S P P SS +R +P++ N + +P+ P+D + ++ S+ L +P
Sbjct: 51 SSPIRRPNSSLISRGSPSK-------NQKQQKNVPYRPSDDLKNYSKILSNSNETNLLSP 103
Query: 68 SSSPDNLPFLDIFDSPQLMATPAQVSNSNFS 98
+SS + D+ S Q+ + + +S FS
Sbjct: 104 ASSNTQTEYFDVLPSFQMFQSILKRDDSQFS 134
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.317 0.129 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 172,800,279
Number of Sequences: 2790947
Number of extensions: 6263175
Number of successful extensions: 21042
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 20939
Number of HSP's gapped (non-prelim): 105
length of query: 107
length of database: 848,049,833
effective HSP length: 83
effective length of query: 24
effective length of database: 616,401,232
effective search space: 14793629568
effective search space used: 14793629568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC144513.18