BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144481.12 - phase: 0 /pseudo
(72 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9FKK2 MADS-box protein-like [Arabidopsis thaliana] 103 1e-21
UniRef100_Q7X9H7 MADS-box protein AGL62 [Arabidopsis thaliana] 103 1e-21
UniRef100_O80807 T8F5.14 protein [Arabidopsis thaliana] 91 7e-18
UniRef100_O23700 MADS-box protein [Arabidopsis thaliana] 90 1e-17
UniRef100_Q9LMM8 F22L4.7 protein [Arabidopsis thaliana] 90 1e-17
UniRef100_Q9SK48 Putative MADS-box protein [Arabidopsis thaliana] 90 2e-17
UniRef100_O23222 MADS-box protein AGL40 [Arabidopsis thaliana] 87 1e-16
UniRef100_Q84VN8 Putative MADS-box transcription factor [Arabido... 74 1e-12
UniRef100_Q84VN7 Putative MADS-box transcription factor [Arabido... 74 1e-12
UniRef100_Q84VN5 Putative MADS-box transcription factor [Arabido... 74 1e-12
UniRef100_Q84VN3 Putative MADS-box transcription factor [Arabido... 74 1e-12
UniRef100_Q84VN1 Putative MADS-box transcription factor [Arabido... 74 1e-12
UniRef100_Q84VN2 Putative MADS-box transcription factor [Arabido... 73 2e-12
UniRef100_Q654X7 MADS-box protein-like [Oryza sativa] 73 2e-12
UniRef100_Q6YTZ9 MADS-box protein-like [Oryza sativa] 72 4e-12
UniRef100_Q84VN4 Putative MADS-box transcription factor [Arabido... 71 8e-12
UniRef100_Q84VL5 Putative MADS-box transcription factor [Arabido... 71 8e-12
UniRef100_O64703 MADS-box protein [Arabidopsis thaliana] 71 8e-12
UniRef100_Q94CT0 P0459B04.16 protein [Oryza sativa] 69 2e-11
UniRef100_Q84MI3 MADS-box protein [Brassica rapa subsp. pekinensis] 69 2e-11
>UniRef100_Q9FKK2 MADS-box protein-like [Arabidopsis thaliana]
Length = 299
Score = 103 bits (257), Expect = 1e-21
Identities = 47/62 (75%), Positives = 56/62 (89%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
M NESNLQVTFSK +GLFKKASELCTLCGA +A++VFSP KVFSFGHPNVD+VIDR++
Sbjct: 16 MKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFI 75
Query: 61 SS 62
++
Sbjct: 76 NN 77
>UniRef100_Q7X9H7 MADS-box protein AGL62 [Arabidopsis thaliana]
Length = 279
Score = 103 bits (257), Expect = 1e-21
Identities = 47/62 (75%), Positives = 56/62 (89%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
M NESNLQVTFSK +GLFKKASELCTLCGA +A++VFSP KVFSFGHPNVD+VIDR++
Sbjct: 16 MKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHPNVDSVIDRFI 75
Query: 61 SS 62
++
Sbjct: 76 NN 77
>UniRef100_O80807 T8F5.14 protein [Arabidopsis thaliana]
Length = 226
Score = 90.9 bits (224), Expect = 7e-18
Identities = 43/59 (72%), Positives = 49/59 (82%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
M+ ESNLQVTFSK GLFKKASE CTLC A IA+IVFSP+ KVFSFGHPNVD ++D +
Sbjct: 16 MTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 74
>UniRef100_O23700 MADS-box protein [Arabidopsis thaliana]
Length = 244
Score = 90.1 bits (222), Expect = 1e-17
Identities = 43/60 (71%), Positives = 50/60 (82%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
M+NESNLQVTFSK +GLFKK SELCTLC A IA+IVFSPS K +SFGHPNV+ ++D L
Sbjct: 16 MTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPNVNKLLDHSL 75
>UniRef100_Q9LMM8 F22L4.7 protein [Arabidopsis thaliana]
Length = 247
Score = 90.1 bits (222), Expect = 1e-17
Identities = 43/60 (71%), Positives = 50/60 (82%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
M+NESNLQVTFSK +GLFKK SELCTLC A IA+IVFSPS K +SFGHPNV+ ++D L
Sbjct: 16 MTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPNVNKLLDHSL 75
>UniRef100_Q9SK48 Putative MADS-box protein [Arabidopsis thaliana]
Length = 210
Score = 89.7 bits (221), Expect = 2e-17
Identities = 42/61 (68%), Positives = 52/61 (84%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
+ ES+ QVTFSK GLFKKASELCTLCGA I +IVFSP++K FSFGHP+V++V+DRY+
Sbjct: 18 IKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYV 77
Query: 61 S 61
S
Sbjct: 78 S 78
>UniRef100_O23222 MADS-box protein AGL40 [Arabidopsis thaliana]
Length = 248
Score = 86.7 bits (213), Expect = 1e-16
Identities = 44/59 (74%), Positives = 47/59 (79%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
M NESNLQVTFSK GLFKKASELCTL GA I LIVFSP KVFSFGHP+V +I R+
Sbjct: 16 MENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSFGHPSVQELIHRF 74
>UniRef100_Q84VN8 Putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 73.6 bits (179), Expect = 1e-12
Identities = 33/43 (76%), Positives = 38/43 (87%)
Query: 17 GLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
GLFKKASELCTLC A IA+IVFSP+ KVFSFGHPNVD ++D +
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 43
>UniRef100_Q84VN7 Putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 73.6 bits (179), Expect = 1e-12
Identities = 33/43 (76%), Positives = 38/43 (87%)
Query: 17 GLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
GLFKKASELCTLC A IA+IVFSP+ KVFSFGHPNVD ++D +
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 43
>UniRef100_Q84VN5 Putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 73.6 bits (179), Expect = 1e-12
Identities = 33/43 (76%), Positives = 38/43 (87%)
Query: 17 GLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
GLFKKASELCTLC A IA+IVFSP+ KVFSFGHPNVD ++D +
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 43
>UniRef100_Q84VN3 Putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 73.6 bits (179), Expect = 1e-12
Identities = 33/43 (76%), Positives = 38/43 (87%)
Query: 17 GLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
GLFKKASELCTLC A IA+IVFSP+ KVFSFGHPNVD ++D +
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 43
>UniRef100_Q84VN1 Putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 73.6 bits (179), Expect = 1e-12
Identities = 33/43 (76%), Positives = 38/43 (87%)
Query: 17 GLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
GLFKKASELCTLC A IA+IVFSP+ KVFSFGHPNVD ++D +
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFGHPNVDVLLDHF 43
>UniRef100_Q84VN2 Putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 72.8 bits (177), Expect = 2e-12
Identities = 32/43 (74%), Positives = 38/43 (87%)
Query: 17 GLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
GLFKKASELCTLC A +A+IVFSP+ KVFSFGHPNVD ++D +
Sbjct: 1 GLFKKASELCTLCDAKLAMIVFSPAGKVFSFGHPNVDVLLDHF 43
>UniRef100_Q654X7 MADS-box protein-like [Oryza sativa]
Length = 210
Score = 72.8 bits (177), Expect = 2e-12
Identities = 34/59 (57%), Positives = 42/59 (70%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
+ N QVTFSK NGLFKKASEL TLCGA +A++ FS + VF+FG P VD V+ R+
Sbjct: 20 IDNSGRRQVTFSKRRNGLFKKASELSTLCGASVAVVAFSSAGNVFAFGQPTVDAVVRRF 78
>UniRef100_Q6YTZ9 MADS-box protein-like [Oryza sativa]
Length = 210
Score = 72.0 bits (175), Expect = 4e-12
Identities = 34/63 (53%), Positives = 46/63 (72%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
+ +E QV FSK G FKKASEL LC A +A +VFSP+ K +SFGHP+V+ ++DR+L
Sbjct: 25 IESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHPSVEFLLDRFL 84
Query: 61 SST 63
SS+
Sbjct: 85 SSS 87
>UniRef100_Q84VN4 Putative MADS-box transcription factor [Arabidopsis thaliana]
Length = 168
Score = 70.9 bits (172), Expect = 8e-12
Identities = 32/43 (74%), Positives = 37/43 (85%)
Query: 17 GLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
GLFKKASELCTLC A IA+IVFSP+ KVFSF HPNVD ++D +
Sbjct: 1 GLFKKASELCTLCDAKIAMIVFSPAGKVFSFDHPNVDVLLDHF 43
>UniRef100_Q84VL5 Putative MADS-box transcription factor [Arabidopsis lyrata]
Length = 166
Score = 70.9 bits (172), Expect = 8e-12
Identities = 31/43 (72%), Positives = 39/43 (90%)
Query: 17 GLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRY 59
GLFKK+SELCTLC A IA+IVFSPS KV+SFGHPNV+ ++D++
Sbjct: 1 GLFKKSSELCTLCDAEIAIIVFSPSGKVYSFGHPNVNVLLDQF 43
>UniRef100_O64703 MADS-box protein [Arabidopsis thaliana]
Length = 172
Score = 70.9 bits (172), Expect = 8e-12
Identities = 32/53 (60%), Positives = 41/53 (76%)
Query: 8 QVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
QVTFSK GLFKKASEL TLC A + ++VFSP K FS+G PN+D+V +R++
Sbjct: 18 QVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPNLDSVAERFM 70
>UniRef100_Q94CT0 P0459B04.16 protein [Oryza sativa]
Length = 208
Score = 69.3 bits (168), Expect = 2e-11
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
+ +E QV FSK G FKKASEL LC A +A +VFSP+ K +SFGHP+V+ +++R+L
Sbjct: 25 IESEEARQVCFSKRRAGFFKKASELSILCSADVAAVVFSPAGKAYSFGHPSVECLLERFL 84
Query: 61 SSTTS 65
++S
Sbjct: 85 PDSSS 89
>UniRef100_Q84MI3 MADS-box protein [Brassica rapa subsp. pekinensis]
Length = 213
Score = 69.3 bits (168), Expect = 2e-11
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 1 MSNESNLQVTFSKHCNGLFKKASELCTLCGAYIALIVFSPSEKVFSFGHPNVDTVIDRYL 60
+ N ++ QVTFSK NGL KKASEL LC A ++LI+FSP K++ F N+ IDRYL
Sbjct: 11 IENATSRQVTFSKRRNGLLKKASELSVLCDAEVSLIIFSPKAKLYEFASSNMQDTIDRYL 70
Query: 61 SSTTSK 66
T +
Sbjct: 71 RHTKDR 76
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.320 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,581,278
Number of Sequences: 2790947
Number of extensions: 3367988
Number of successful extensions: 8232
Number of sequences better than 10.0: 1419
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 6817
Number of HSP's gapped (non-prelim): 1422
length of query: 72
length of database: 848,049,833
effective HSP length: 48
effective length of query: 24
effective length of database: 714,084,377
effective search space: 17138025048
effective search space used: 17138025048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC144481.12