Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144459.10 + phase: 0 
         (167 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8L3W1 Reduced vernalization response 1 [Arabidopsis t...    92  5e-18
UniRef100_Q6R2U8 Reduced vernalization response 1 [Brassica camp...    89  4e-17
UniRef100_Q6V0J6 Reduced vernalization response 1 [Brassica camp...    88  9e-17
UniRef100_Q9ZSH7 T15B16.18 protein [Arabidopsis thaliana]              78  1e-13
UniRef100_Q9LJ70 Gb|AAC72857.1 [Arabidopsis thaliana]                  74  1e-12
UniRef100_Q84R27 Hypothetical protein At3g18960 [Arabidopsis tha...    74  1e-12
UniRef100_Q7XS75 OSJNBa0020I02.5 protein [Oryza sativa]                60  3e-08
UniRef100_Q8S2E6 P0022F10.13 protein [Oryza sativa]                    57  1e-07
UniRef100_Q9FGD2 Gb|AAF30309.1 [Arabidopsis thaliana]                  51  1e-05
UniRef100_Q851V1 Putative auxin response factor [Oryza sativa]         51  1e-05
UniRef100_Q6Z0D2 Hypothetical protein OSJNBa0078D03.39 [Oryza sa...    50  2e-05
UniRef100_Q9XIB4 F13F21.9 protein [Arabidopsis thaliana]               50  3e-05
UniRef100_Q9FJG2 Gb|AAD26962.1 [Arabidopsis thaliana]                  49  6e-05
UniRef100_Q851V0 Putative auxin response factor [Oryza sativa]         48  1e-04
UniRef100_Q67VL7 Hypothetical protein P0505A04.21 [Oryza sativa]       47  1e-04
UniRef100_Q8H0U7 Hypothetical protein At2g35310 [Arabidopsis tha...    47  2e-04
UniRef100_Q5PNU4 At2g35310 [Arabidopsis thaliana]                      46  3e-04
UniRef100_Q9M8J6 F28L1.16 protein [Arabidopsis thaliana]               46  3e-04
UniRef100_Q851V5 Putative auxin response factor [Oryza sativa]         46  3e-04
UniRef100_Q6AV22 Putative transcirption factor [Oryza sativa]          46  3e-04

>UniRef100_Q8L3W1 Reduced vernalization response 1 [Arabidopsis thaliana]
          Length = 341

 Score = 92.0 bits (227), Expect = 5e-18
 Identities = 40/84 (47%), Positives = 60/84 (70%)

Query: 10  RIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFI 69
           R+PD+F+++F +EL+    +TVPDG VW++ L+K    ++F + WQEFV+ YSI  G  +
Sbjct: 21  RVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLL 80

Query: 70  SFKYEGNSKFSVIIFDATSVEISY 93
            F+YEGNS FSV IF+ +  EI+Y
Sbjct: 81  IFRYEGNSAFSVYIFNLSHSEINY 104


>UniRef100_Q6R2U8 Reduced vernalization response 1 [Brassica campestris]
          Length = 329

 Score = 89.0 bits (219), Expect = 4e-17
 Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 2/86 (2%)

Query: 10  RIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGEN--VFFCNKWQEFVEYYSIGYGC 67
           R+PD+F++RF +EL+    +TVPDG VW++ L+K   N  ++F + WQEFV+ YSI  G 
Sbjct: 21  RVPDKFVSRFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWFQDGWQEFVDRYSIRIGY 80

Query: 68  FISFKYEGNSKFSVIIFDATSVEISY 93
            + F+YEGNS FSV I++    EI+Y
Sbjct: 81  LLIFRYEGNSAFSVCIYNLPQSEINY 106


>UniRef100_Q6V0J6 Reduced vernalization response 1 [Brassica campestris]
          Length = 329

 Score = 87.8 bits (216), Expect = 9e-17
 Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 2/86 (2%)

Query: 10  RIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGEN--VFFCNKWQEFVEYYSIGYGC 67
           R+PD+F+++F +EL+    +TVPDG VW++ L+K   N  ++F + WQEFV+ YSI  G 
Sbjct: 21  RVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNNNKIWFQDGWQEFVDRYSIRIGY 80

Query: 68  FISFKYEGNSKFSVIIFDATSVEISY 93
            + F+YEGNS FSV I++    EI+Y
Sbjct: 81  LLIFRYEGNSAFSVCIYNLPQSEINY 106


>UniRef100_Q9ZSH7 T15B16.18 protein [Arabidopsis thaliana]
          Length = 190

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 37/89 (41%), Positives = 56/89 (62%)

Query: 8   MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
           M RIP  F+   G++L+ V T+  P G    ++LK+ GE ++F   W EF E +SI  G 
Sbjct: 43  MMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGH 102

Query: 68  FISFKYEGNSKFSVIIFDATSVEISYPFE 96
           F+ F+Y+ NS F VIIF+A++ E +YP +
Sbjct: 103 FLLFEYKKNSSFRVIIFNASACETNYPLD 131


>UniRef100_Q9LJ70 Gb|AAC72857.1 [Arabidopsis thaliana]
          Length = 193

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 35/89 (39%), Positives = 54/89 (60%)

Query: 8   MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
           M +IP  F+   G++L+ V T+  P G    ++LK+ GE ++F   W EF E +SI  G 
Sbjct: 43  MMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGH 102

Query: 68  FISFKYEGNSKFSVIIFDATSVEISYPFE 96
           F+ F+Y+ NS F VIIF+ ++ E  YP +
Sbjct: 103 FLLFEYKENSSFRVIIFNVSACETKYPLD 131


>UniRef100_Q84R27 Hypothetical protein At3g18960 [Arabidopsis thaliana]
          Length = 209

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 35/89 (39%), Positives = 54/89 (60%)

Query: 8   MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
           M +IP  F+   G++L+ V T+  P G    ++LK+ GE ++F   W EF E +SI  G 
Sbjct: 43  MMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGH 102

Query: 68  FISFKYEGNSKFSVIIFDATSVEISYPFE 96
           F+ F+Y+ NS F VIIF+ ++ E  YP +
Sbjct: 103 FLLFEYKENSSFRVIIFNVSACETKYPLD 131


>UniRef100_Q7XS75 OSJNBa0020I02.5 protein [Oryza sativa]
          Length = 427

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)

Query: 10  RIPDEFITRF--GNELN-NVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYG 66
           RIPD+F+  +  G  LN N+A I  P G+ W++EL K    VF    W +F+ ++ I  G
Sbjct: 156 RIPDKFVRDYITGENLNSNMAIILSPLGKSWRVELDKDQSGVFLGGGWLQFLSFHGISRG 215

Query: 67  CFISFKYEGNSKFSVIIF 84
             + F+YEGN  F + +F
Sbjct: 216 DVVIFRYEGNLVFKISVF 233



 Score = 34.3 bits (77), Expect = 1.2
 Identities = 23/90 (25%), Positives = 38/90 (41%), Gaps = 9/90 (10%)

Query: 6   FLMQRIPDEFITRFGNELNN-------VATITVPDGRVWKMELKKRGENVFFCNK-WQEF 57
           F   RI DE   + G  +          A +  P G+ W + + + G+   F  + W EF
Sbjct: 30  FRKMRICDELAAQLGVGVGGGGAPRAATARVASPLGKAWDVGVVRDGDGRAFLGRGWAEF 89

Query: 58  VEYYSIGYGCFISFKYEGNSKFSVIIFDAT 87
              + +G G F+  ++ G    +V  FD T
Sbjct: 90  AAAHGLGVGWFVVLRH-GGGVLAVEAFDTT 118


>UniRef100_Q8S2E6 P0022F10.13 protein [Oryza sativa]
          Length = 402

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 23/69 (33%), Positives = 43/69 (61%)

Query: 22  ELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFISFKYEGNSKFSV 81
           E +  AT+  P GR W + +++  E  FF + W +FV+  ++    F+ F+Y+GN++F+ 
Sbjct: 56  EASMAATLEGPSGRTWLVVIRRTAEGTFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTA 115

Query: 82  IIFDATSVE 90
           ++FD T+ E
Sbjct: 116 MVFDRTACE 124


>UniRef100_Q9FGD2 Gb|AAF30309.1 [Arabidopsis thaliana]
          Length = 334

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 11  IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGEN----VFFCNKWQEFVEYYSIGYG 66
           IP  FI      L   A +    GR+W +E K         VFF   WQ F    S+ +G
Sbjct: 25  IPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFFTKGWQSFANDQSLEFG 84

Query: 67  CFISFKYEGNSKFSVIIF 84
            F+ F Y+G+S+FSV IF
Sbjct: 85  DFLVFSYDGDSRFSVTIF 102


>UniRef100_Q851V1 Putative auxin response factor [Oryza sativa]
          Length = 306

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 23/89 (25%), Positives = 44/89 (48%)

Query: 2   VCYHFLMQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYY 61
           + Y    + IP+EF+  FG ++     +    G  + +++ K    V   + W  +V  +
Sbjct: 37  IMYMASHKTIPNEFLHNFGGKIPKSIKLETRSGLTFDVQVTKNSGRVVLQSGWASYVSAH 96

Query: 62  SIGYGCFISFKYEGNSKFSVIIFDATSVE 90
            +  G F+ FKY G+S+   +IFD++  E
Sbjct: 97  DLKIGDFLVFKYSGDSQLKTLIFDSSGCE 125


>UniRef100_Q6Z0D2 Hypothetical protein OSJNBa0078D03.39 [Oryza sativa]
          Length = 391

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 24/80 (30%), Positives = 41/80 (51%)

Query: 11  IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFIS 70
           IP EF+ R   ++     +   +   + + + K  E V F   W +FV+ + +  G  + 
Sbjct: 49  IPKEFVQRLKGDIPEEIQLETHNRNSYTVRVDKSQEKVIFAAGWAQFVKTFDLHMGDSMM 108

Query: 71  FKYEGNSKFSVIIFDATSVE 90
           F+++GNS+F VIIFD    E
Sbjct: 109 FRFKGNSQFDVIIFDQVGRE 128


>UniRef100_Q9XIB4 F13F21.9 protein [Arabidopsis thaliana]
          Length = 210

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 38/141 (26%), Positives = 60/141 (41%), Gaps = 29/141 (20%)

Query: 8   MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
           M ++P  F+ RFG +L +  T+  P G    + +K+ G+ V+F   W++           
Sbjct: 44  MMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWRD----------- 91

Query: 68  FISFKYEGNSKFSVIIFDATSVEISYPFETPSTNGEPK--------TNYPSSRKRSKVET 119
                    S F V+IFD ++ EI YP +    N E          T + SS    +V  
Sbjct: 92  ---------SCFRVVIFDVSASEIEYPLDDTDDNREEVMDDDEQGFTGFESSDDDGEVVD 142

Query: 120 CERLRKKVKNMSKYASKRVED 140
            + L KK K   +   K V+D
Sbjct: 143 MDELLKKKKKKPRVNIKLVDD 163


>UniRef100_Q9FJG2 Gb|AAD26962.1 [Arabidopsis thaliana]
          Length = 307

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 30/121 (24%), Positives = 62/121 (50%), Gaps = 8/121 (6%)

Query: 7   LMQRIPDEFITRFGNELNNVATIT-VPDGRVWKMELKKRGENVFFCNK-WQEFVEYYSIG 64
           +M+ IP   I    ++ ++   +  VP GR W++++ K     +  ++ W +FV    +G
Sbjct: 33  MMRMIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLG 92

Query: 65  YGCFISFKYEGNSKFSVIIFDATSVEISYPFETPSTNG------EPKTNYPSSRKRSKVE 118
              +++F +E N  F+V IF+A   E+  P +T +++       E K+ Y   +K  ++E
Sbjct: 93  ENEYLTFTHEANMCFNVTIFEADGTEMLRPRKTITSSSGRNKREERKSIYKDVKKEEEIE 152

Query: 119 T 119
           +
Sbjct: 153 S 153


>UniRef100_Q851V0 Putative auxin response factor [Oryza sativa]
          Length = 750

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 12/103 (11%)

Query: 3   CYHFLMQRI---------PDEFITRFGNELNNVATITVPDGRVWKMEL--KKRGENVFFC 51
           C HFL   +         P  F   F   ++ V  +  P G+ W + +     GE V   
Sbjct: 29  CKHFLTYMVGDFTESMIVPSRFANNFNGHISEVVNLKSPSGKTWSIGVAYSDTGELVLRS 88

Query: 52  NKWQEFVEYYSIGYGCFISFKYEGNSKFSVIIFDATSVEISYP 94
             W+EFV+   +     + F+Y G S F V+IFD +  E + P
Sbjct: 89  G-WKEFVDANGVQENDCLLFRYSGVSSFDVLIFDPSGCEKASP 130



 Score = 41.6 bits (96), Expect = 0.008
 Identities = 23/86 (26%), Positives = 37/86 (42%), Gaps = 2/86 (2%)

Query: 11  IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNK-WQEFVEYYSIGYGCFI 69
           +P  F   F   ++    +  P G  W + +             W+EFV+   I  G  +
Sbjct: 424 VPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCL 483

Query: 70  SFKYEG-NSKFSVIIFDATSVEISYP 94
            F+Y G +S F V+IFD +  E + P
Sbjct: 484 LFRYSGVSSSFDVLIFDPSGCEKASP 509


>UniRef100_Q67VL7 Hypothetical protein P0505A04.21 [Oryza sativa]
          Length = 393

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%)

Query: 10  RIPDEFITRFGNEL----NNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGY 65
           +IP++F+ +   E     +  A I  P G+ W++EL++   +V   + W  F+  + +  
Sbjct: 157 KIPEKFVQQHLTETYTNNHQNAIIVCPLGKFWRVELQREQPDVLLRDGWAPFLAAHDLSE 216

Query: 66  GCFISFKYEGNSKFSVIIF 84
           G  + F+YEGN  F+V +F
Sbjct: 217 GNILLFRYEGNMVFTVEVF 235


>UniRef100_Q8H0U7 Hypothetical protein At2g35310 [Arabidopsis thaliana]
          Length = 288

 Score = 47.0 bits (110), Expect = 2e-04
 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%)

Query: 8   MQRIPDEFITRFGN-ELNNVATITVPDGRVWKMELKKRGENVFFCNK--WQEFVEYYSIG 64
           M+ +P +F+  F N EL+    I    G  W++E+ K     +F  K  W++FV   ++G
Sbjct: 33  MRALPYDFVRSFSNNELSRKMKIKARWGSSWEVEICKN-PRFYFMEKSGWEKFVSDNALG 91

Query: 65  YGCFISFKYEGNSKFSVIIFDATSVEISYPFETPS 99
              F++F ++GN +F+V IF     E+  P ++ S
Sbjct: 92  ASEFLTFTHKGNMRFTVNIFMQDGKEVLQPPQSMS 126


>UniRef100_Q5PNU4 At2g35310 [Arabidopsis thaliana]
          Length = 288

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 4/95 (4%)

Query: 8   MQRIPDEFITRFGN-ELNNVATITVPDGRVWKMELKKRGENVFFCNK--WQEFVEYYSIG 64
           M+ +P +F+  F N EL+    I    G  W++E+ K     +F  K  W++FV   ++G
Sbjct: 33  MRALPYDFVRSFSNNELSRKMKIKARWGSSWEVEICKN-PRFYFMEKSGWEKFVSDNALG 91

Query: 65  YGCFISFKYEGNSKFSVIIFDATSVEISYPFETPS 99
              F++F ++GN +F+V IF     E+  P ++ S
Sbjct: 92  ASEFLTFTHKGNMRFTVNIFMQDGKEMLQPPQSMS 126


>UniRef100_Q9M8J6 F28L1.16 protein [Arabidopsis thaliana]
          Length = 175

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 21/77 (27%), Positives = 37/77 (47%)

Query: 8  MQRIPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGC 67
          ++ IP  +       L   A +T   GRVWK+ +  + E V+    W+ FV    +  G 
Sbjct: 23 LKLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKREQVYLARGWENFVADNELKDGE 82

Query: 68 FISFKYEGNSKFSVIIF 84
          F++F ++G   + V I+
Sbjct: 83 FLTFVFDGYKSYEVSIY 99


>UniRef100_Q851V5 Putative auxin response factor [Oryza sativa]
          Length = 1029

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 22/80 (27%), Positives = 41/80 (50%)

Query: 11  IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFIS 70
           IP+EF+  F  ++     + + DG  + +++ K    +   + W+ FV  + +  G F+ 
Sbjct: 748 IPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLV 807

Query: 71  FKYEGNSKFSVIIFDATSVE 90
           F Y+G SK  V+IF  +  E
Sbjct: 808 FSYDGISKLKVLIFGPSGCE 827



 Score = 45.4 bits (106), Expect = 5e-04
 Identities = 22/75 (29%), Positives = 35/75 (46%)

Query: 11  IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFIS 70
           IP +F   F +++     +   +G    + + K    +     W EF   + I  G F+ 
Sbjct: 164 IPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDIKMGDFLV 223

Query: 71  FKYEGNSKFSVIIFD 85
           F+Y GNS+F V IFD
Sbjct: 224 FRYTGNSQFEVKIFD 238



 Score = 45.4 bits (106), Expect = 5e-04
 Identities = 22/82 (26%), Positives = 40/82 (47%)

Query: 11  IPDEFITRFGNELNNVATITVPDGRVWKMELKKRGENVFFCNKWQEFVEYYSIGYGCFIS 70
           IPD+F   F   ++    +    G  + +++ K+   +   + W+ FV  + +  G F+ 
Sbjct: 467 IPDKFARHFKGVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLV 526

Query: 71  FKYEGNSKFSVIIFDATSVEIS 92
           FKY G+    V+IFD +  E S
Sbjct: 527 FKYNGDFLLQVLIFDPSGCEKS 548


>UniRef100_Q6AV22 Putative transcirption factor [Oryza sativa]
          Length = 536

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 30/155 (19%)

Query: 11  IPDEFITRFGNELNNVATITVPDGRVWKMELKK-RGENVFFCNKWQEFVEYYSIGYGCFI 69
           +P +F+  FG + +    +  P+G ++ +E+ K + + V  C  W+ FV+ + I     +
Sbjct: 43  MPCKFVNHFGGDFSGTIKLQSPNGILYVVEVTKCKNKTVLRCG-WEAFVDAHHIEENDSL 101

Query: 70  SFKYEGNSKFSVIIFDATSVEISYPFETPSTNGEPKTNYPSSRKRSKVETCERLRKKVKN 129
            F+   NS+F V+IFD+   E                         KV +C  +R   K+
Sbjct: 102 LFRCVENSRFEVLIFDSDDCE-------------------------KVFSCAGIRNTCKS 136

Query: 130 MSKYASKRVEDAAKELNPNNPYFRSKIVKGKYAVR 164
           + + +S   +D A E + +  + R++  KG ++ R
Sbjct: 137 IQEKSSSSCDDTA-ESSESEGFARNQ--KGSFSHR 168


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.320    0.136    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 297,789,497
Number of Sequences: 2790947
Number of extensions: 12152162
Number of successful extensions: 37695
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 37611
Number of HSP's gapped (non-prelim): 113
length of query: 167
length of database: 848,049,833
effective HSP length: 118
effective length of query: 49
effective length of database: 518,718,087
effective search space: 25417186263
effective search space used: 25417186263
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 70 (31.6 bits)


Medicago: description of AC144459.10