BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144430.5 - phase: 0 /pseudo
(125 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9LQM1 F5D14.14 protein [Arabidopsis thaliana] 119 2e-26
UniRef100_Q6ET30 Putative tobamovirus multiplication protein 2B ... 119 2e-26
UniRef100_Q682B7 Hypothetical protein At1g32370 [Arabidopsis tha... 119 2e-26
UniRef100_Q8L9F1 Hypothetical protein [Arabidopsis thaliana] 119 2e-26
UniRef100_Q65XT6 Hypothetical protein P0033D06.12 [Oryza sativa] 38 0.045
UniRef100_Q19663 Hypothetical protein F21C10.7 [Caenorhabditis e... 37 0.078
UniRef100_O24911 Methyl-accepting chemotaxis transducer [Helicob... 35 0.38
UniRef100_Q60WB1 Hypothetical protein CBG19196 [Caenorhabditis b... 35 0.50
UniRef100_Q9ZMY7 Methyl-accepting chemotaxis protein [Helicobact... 34 0.66
UniRef100_Q5QCS4 Tat protein [Human immunodeficiency virus 1] 33 1.1
UniRef100_Q9RAB2 56 kDa type-specific antigen [Rickettsia tsutsu... 33 1.5
UniRef100_Q6BQK9 Similar to CA5131|IPF5124 Candida albicans IPF5... 33 1.5
UniRef100_UPI00002DAB9A UPI00002DAB9A UniRef100 entry 33 1.9
UniRef100_UPI00002342AA UPI00002342AA UniRef100 entry 33 1.9
UniRef100_UPI0000234EBD UPI0000234EBD UniRef100 entry 32 2.5
UniRef100_Q5SCB0 DP-E2F-like protein [Ostreococcus tauri] 32 2.5
UniRef100_Q20329 Hypothetical protein F42C5.9 [Caenorhabditis el... 32 2.5
UniRef100_UPI0000363156 UPI0000363156 UniRef100 entry 32 3.3
UniRef100_UPI000036DFE5 UPI000036DFE5 UniRef100 entry 32 3.3
UniRef100_UPI000049A5D6 UPI000049A5D6 UniRef100 entry 32 3.3
>UniRef100_Q9LQM1 F5D14.14 protein [Arabidopsis thaliana]
Length = 536
Score = 119 bits (298), Expect = 2e-26
Identities = 63/94 (67%), Positives = 74/94 (78%)
Query: 32 TGGDNSAKAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQVL 91
+GGD +AKAVVA+QISQ V ST+NLLHLM+ SS +QA+L KLPKNLLAK S K T Q L
Sbjct: 12 SGGDRTAKAVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQAL 71
Query: 92 EQLPRVISSLDAHMENGLQNVPQLKTVVQLLANM 125
QLP+VISSLDAH+E+GL + L TV QLL NM
Sbjct: 72 AQLPQVISSLDAHIESGLHSGVHLNTVTQLLENM 105
>UniRef100_Q6ET30 Putative tobamovirus multiplication protein 2B [Oryza sativa]
Length = 130
Score = 119 bits (298), Expect = 2e-26
Identities = 65/101 (64%), Positives = 74/101 (72%)
Query: 25 MSTQNAATGGDNSAKAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTV 84
M+ A G A+A VAEQI+Q VQSTSNLL LM+ SSPAQA L KLPK LLAK S
Sbjct: 1 MAAAAAGGGRGGGAQAAVAEQIAQAVQSTSNLLQLMEESSPAQAHLAKLPKKLLAKASLA 60
Query: 85 KNTQQVLEQLPRVISSLDAHMENGLQNVPQLKTVVQLLANM 125
KNT QVL QLP VISSLDA+M+ LQ+ Q+KTV QLL+NM
Sbjct: 61 KNTGQVLHQLPSVISSLDAYMDASLQSASQIKTVTQLLSNM 101
>UniRef100_Q682B7 Hypothetical protein At1g32370 [Arabidopsis thaliana]
Length = 123
Score = 119 bits (298), Expect = 2e-26
Identities = 63/94 (67%), Positives = 74/94 (78%)
Query: 32 TGGDNSAKAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQVL 91
+GGD +AKAVVA+QISQ V ST+NLLHLM+ SS +QA+L KLPKNLLAK S K T Q L
Sbjct: 12 SGGDRTAKAVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQAL 71
Query: 92 EQLPRVISSLDAHMENGLQNVPQLKTVVQLLANM 125
QLP+VISSLDAH+E+GL + L TV QLL NM
Sbjct: 72 AQLPQVISSLDAHIESGLHSGVHLNTVTQLLENM 105
>UniRef100_Q8L9F1 Hypothetical protein [Arabidopsis thaliana]
Length = 131
Score = 119 bits (298), Expect = 2e-26
Identities = 63/94 (67%), Positives = 74/94 (78%)
Query: 32 TGGDNSAKAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQVL 91
+GGD +AKAVVA+QISQ V ST+NLLHLM+ SS +QA+L KLPKNLLAK S K T Q L
Sbjct: 12 SGGDRTAKAVVADQISQAVNSTANLLHLMRQSSSSQAQLAKLPKNLLAKASLTKATGQAL 71
Query: 92 EQLPRVISSLDAHMENGLQNVPQLKTVVQLLANM 125
QLP+VISSLDAH+E+GL + L TV QLL NM
Sbjct: 72 AQLPQVISSLDAHIESGLHSGVHLNTVTQLLENM 105
>UniRef100_Q65XT6 Hypothetical protein P0033D06.12 [Oryza sativa]
Length = 491
Score = 38.1 bits (87), Expect = 0.045
Identities = 20/66 (30%), Positives = 33/66 (49%)
Query: 1 MKKMEQRRQDPPTAANRRRPLWRPMSTQNAATGGDNSAKAVVAEQISQTVQSTSNLLHLM 60
M + ++++ PP A R WR ST+ AA D S A+ + ++ TSN ++ +
Sbjct: 72 MVEEKKKKTTPPHARGSNRTTWRSTSTKLAAAVCDRSPLALKGDHRRSRLKPTSNFINKV 131
Query: 61 QHSSPA 66
H PA
Sbjct: 132 NHRLPA 137
>UniRef100_Q19663 Hypothetical protein F21C10.7 [Caenorhabditis elegans]
Length = 2541
Score = 37.4 bits (85), Expect = 0.078
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 44 EQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQVLEQLPRVISSLDA 103
+Q+SQ V+ TS LL +++ Q ++V++ +N+ V+T N Q+ EQ+ R I L
Sbjct: 679 DQLSQKVELTS-LLKIVEDVQIWQEEMVEIIRNMNQVVTTQSNNQEQFEQVRRKIEDLKV 737
Query: 104 HMENGLQNVPQLKTV 118
++ +++ KT+
Sbjct: 738 EVDKKSEHLEACKTL 752
>UniRef100_O24911 Methyl-accepting chemotaxis transducer [Helicobacter pylori]
Length = 673
Score = 35.0 bits (79), Expect = 0.38
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 36 NSAKAV--VAEQISQTVQSTSNLLHLMQHSSPAQAKLV-KLPKNLLAKVSTVKNTQQVLE 92
N KA+ + ++IS ++++ + + H S V L K + ++KNT Q LE
Sbjct: 463 NMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCVDNLTKTAHKQERSLKNTTQSLE 522
Query: 93 QLPRVISSLDAHMENGLQNVPQLKTVVQLLANM 125
++ +I+++D+ + + +K+VV ++ ++
Sbjct: 523 EITNIITTIDSKSQEMISQGEDIKSVVDMIRDI 555
>UniRef100_Q60WB1 Hypothetical protein CBG19196 [Caenorhabditis briggsae]
Length = 2696
Score = 34.7 bits (78), Expect = 0.50
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 44 EQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQVLEQLPRVISSLDA 103
+Q+SQ V+ S LL +++ Q ++V++ +N+ V+T N Q+ E + R I L
Sbjct: 757 DQLSQKVELAS-LLKIVEDVQIWQEEMVEIIRNMNQVVTTQSNNQEQFEHVRRKIEDLKV 815
Query: 104 HMENGLQNVPQLKTVVQ 120
++ +++ KT+ Q
Sbjct: 816 EVDKKSEHLEACKTLSQ 832
>UniRef100_Q9ZMY7 Methyl-accepting chemotaxis protein [Helicobacter pylori J99]
Length = 673
Score = 34.3 bits (77), Expect = 0.66
Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 36 NSAKAV--VAEQISQTVQSTSNLLHLMQHSSPAQAKLV-KLPKNLLAKVSTVKNTQQVLE 92
N KA+ + ++IS ++++ + + H S V L K + ++KNT Q LE
Sbjct: 463 NMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCVDNLTKTAHKQERSLKNTTQSLE 522
Query: 93 QLPRVISSLDAHMENGLQNVPQLKTVVQLLANM 125
++ +I+ +D+ + + +K+VV ++ ++
Sbjct: 523 EITNIITMIDSKSQEMISQGEDIKSVVDMIRDI 555
>UniRef100_Q5QCS4 Tat protein [Human immunodeficiency virus 1]
Length = 100
Score = 33.5 bits (75), Expect = 1.1
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 2 KKMEQRRQDPPTAANRRRPLWRPMS-TQNAATGGDNSAKAV 41
KK QRR PP++ + + P+ +P+S T+ TG + S K V
Sbjct: 50 KKRRQRRSAPPSSEDHQNPISKPLSRTRGDQTGSEESKKKV 90
>UniRef100_Q9RAB2 56 kDa type-specific antigen [Rickettsia tsutsugamushi]
Length = 477
Score = 33.1 bits (74), Expect = 1.5
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 6 QRRQDPPTAANRRRPLWRPMSTQNAATGGDNSAKAVVAEQISQTV-QSTSNLLHLMQHSS 64
QR Q P A WR + AA N A + +S + Q S++ HL
Sbjct: 225 QRAQQPANFAIHNHDQWRHLVVGLAALSNANKPSASPVKVLSDKITQIYSDIKHL----- 279
Query: 65 PAQAKLVKLPKNLLAKVSTVKNTQQVLEQLPRVI----SSLDAHMENGLQNVPQLKTVV 119
A + +P L ++V+ Q +++L V+ S D ++ N N QL V+
Sbjct: 280 -ADIAGIDVPDTSLPNSASVEQIQNKMQELNDVLEELRDSFDGYISNAFANQIQLNFVM 337
>UniRef100_Q6BQK9 Similar to CA5131|IPF5124 Candida albicans IPF5124 unknown function
[Debaryomyces hansenii]
Length = 1544
Score = 33.1 bits (74), Expect = 1.5
Identities = 16/80 (20%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 40 AVVAEQISQTVQSTSNLLHLMQHSSPA-QAKLVKLPKNLLAKVSTVKNTQQVLEQLPRVI 98
+++A + S+T + L ++ +P+ K+ ++ N +AK + + +P ++
Sbjct: 922 SLIAVRDSETARIPRTLFEMLSLRNPSIMVKVSRIVANKMAKKDNIGIPSTISSNVPLIV 981
Query: 99 SSLDAHMENGLQNVPQLKTV 118
++ D+H+ N + + L TV
Sbjct: 982 TNTDSHISNDYKTITILPTV 1001
>UniRef100_UPI00002DAB9A UPI00002DAB9A UniRef100 entry
Length = 1310
Score = 32.7 bits (73), Expect = 1.9
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 32 TGGDNSAKAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQVL 91
T DN++ + Q+ + +STSN LH + + ++K+V L +NL + T+K +Q
Sbjct: 857 TEQDNTSMLI--SQLRENKESTSNDLHGLIIFTLKESKIVHLEQNLKSNSETMKGLEQKT 914
Query: 92 EQ 93
EQ
Sbjct: 915 EQ 916
>UniRef100_UPI00002342AA UPI00002342AA UniRef100 entry
Length = 1049
Score = 32.7 bits (73), Expect = 1.9
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 27 TQNAATGGDNSAKAVVAEQ----ISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVS 82
TQN A S+ V AEQ IS + + L H+ +PA+ L +NL ++ S
Sbjct: 428 TQNNAQPNRPSS-LVHAEQTRSPISPSREQGQRLEHIATQGTPARGVDAPLKENLFSQES 486
Query: 83 TVKNTQQVLEQLPRVISSLDAHMENGLQNVPQ 114
+++Q +L + +V S A G QN PQ
Sbjct: 487 QGRDSQYLLRLMQQVRVSPGAGPNQGPQNQPQ 518
>UniRef100_UPI0000234EBD UPI0000234EBD UniRef100 entry
Length = 801
Score = 32.3 bits (72), Expect = 2.5
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 51 QSTSNLLHLMQHSSPAQAKLVKLPKNLLAKVSTVKNTQQ-----VLEQLPRVISSLDAHM 105
+STS L HL + S A + + A + + + QQ +EQ R I++ +H
Sbjct: 381 ESTSALQHLHKISIMANRNGDRAVSAMSAIIEALAHLQQGYSSDSIEQAQRAIAAARSHQ 440
Query: 106 ENG-LQNVPQLKTVVQLL 122
N L++VPQL T+VQ++
Sbjct: 441 LNDELRHVPQLTTLVQIV 458
>UniRef100_Q5SCB0 DP-E2F-like protein [Ostreococcus tauri]
Length = 503
Score = 32.3 bits (72), Expect = 2.5
Identities = 22/74 (29%), Positives = 37/74 (49%), Gaps = 3/74 (4%)
Query: 39 KAVVAEQISQTVQSTSNLLHLMQHSSPAQAKLVKLPKNL---LAKVSTVKNTQQVLEQLP 95
+A V ++Q+ +N LHL+ SS AQA + +N ++ S++ NT + LP
Sbjct: 394 RADVNSIMAQSAMGNANYLHLLAQSSVAQAHAARRMENTAKGMSSDSSIDNTAMFVPPLP 453
Query: 96 RVISSLDAHMENGL 109
+ L A +GL
Sbjct: 454 AFPAMLPAWGMSGL 467
>UniRef100_Q20329 Hypothetical protein F42C5.9 [Caenorhabditis elegans]
Length = 552
Score = 32.3 bits (72), Expect = 2.5
Identities = 23/87 (26%), Positives = 42/87 (47%), Gaps = 6/87 (6%)
Query: 18 RRPLWRPMSTQNAATGGDNSAKAVVAEQISQTVQST-SNLLHLMQHSSPAQAKLVKLPKN 76
RR L+R N G S +AE++ Q + + N +H + SP + L
Sbjct: 468 RRTLYR-----NIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQ 522
Query: 77 LLAKVSTVKNTQQVLEQLPRVISSLDA 103
++A ST +++ L+QLP+ ++ L +
Sbjct: 523 IVASASTFEDSCISLQQLPKFLAQLQS 549
>UniRef100_UPI0000363156 UPI0000363156 UniRef100 entry
Length = 288
Score = 32.0 bits (71), Expect = 3.3
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 17 RRRPLWRPMSTQN---AATGGDNSAKAVVAEQISQTVQSTSN--LLHLMQHSSPAQAKLV 71
+ R R +S N A+ D S K+ E+ Q V S SN L+ ++++ L
Sbjct: 187 KNREALRELSASNEDLTASDDDLSEKSNTKEREGQRVLSASNDDLMASDENTTKESVNLE 246
Query: 72 KLPKNLLAKVSTVKNTQQVLEQLPRVISSLD 102
+L + L++ T+K +++ E++P + +++
Sbjct: 247 RLEQGRLSRSRTIKKKKRISEEMPLIEEAVE 277
>UniRef100_UPI000036DFE5 UPI000036DFE5 UniRef100 entry
Length = 494
Score = 32.0 bits (71), Expect = 3.3
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 8 RQDPPTAANRRRPLWRPMSTQNAATGGDNSAKAVVAEQISQTVQSTSNLLHLMQHSSPAQ 67
RQ P + + R+ S +N +T +S++A+ + Q S+ V+ + M HSSPA
Sbjct: 88 RQQPTSTTSSRKSKQHQSSVRNVSTCEVSSSQAISSPQRSKRVKENTPPRCAMVHSSPAC 147
Query: 68 AKLVKLPKNLLAKVSTVKNTQQVL 91
+ V +A +T + +Q +
Sbjct: 148 STSVTCGWGDVASSTTRERQRQTI 171
>UniRef100_UPI000049A5D6 UPI000049A5D6 UniRef100 entry
Length = 400
Score = 32.0 bits (71), Expect = 3.3
Identities = 24/83 (28%), Positives = 36/83 (42%), Gaps = 12/83 (14%)
Query: 12 PTAANRRRPLWRPMSTQNAATGGDNSAKAVVAEQISQTVQSTSNLL-HLMQHSSPAQAKL 70
P RR LW + QN K++V +VQ T+ L+ H QHS P
Sbjct: 295 PDVFFERRKLWEQLINQN---------KSIVIHIDMDSVQQTNELIQHTEQHSQPCLTSS 345
Query: 71 VKLPKNLLAKVSTVKNTQQVLEQ 93
++ PK V+ NT++ + Q
Sbjct: 346 IQKPKEETQIVTI--NTKEEINQ 366
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.311 0.122 0.327
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,648,547
Number of Sequences: 2790947
Number of extensions: 5095049
Number of successful extensions: 17888
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 17857
Number of HSP's gapped (non-prelim): 80
length of query: 125
length of database: 848,049,833
effective HSP length: 101
effective length of query: 24
effective length of database: 566,164,186
effective search space: 13587940464
effective search space used: 13587940464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC144430.5