BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC144406.4 - phase: 1 /pseudo
         (322 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_UPI00003AFC52 UPI00003AFC52 UniRef100 entry                 501  e-140
UniRef100_Q04716 Mitochondrial ribosomal protein S3 [Petunia hyb...   494  e-138
UniRef100_P27754 Mitochondrial ribosomal protein S3 [Oenothera b...   489  e-137
UniRef100_Q6R978 Ribosomal protein S3 [Zea mays]                      481  e-134
UniRef100_P27928 Mitochondrial ribosomal protein S3 [Zea mays]        479  e-134
UniRef100_Q6YSM0 Ribosomal protein S3 [Brassica napus]                477  e-133
UniRef100_Q5U6C3 Ribosomal protein S3 [Beta vulgaris subsp. vulg...   474  e-132
UniRef100_Q8HHY2 Ribosomal protein S3 [Helianthus annuus]             473  e-132
UniRef100_Q95749 Mitochondrial ribosomal protein S3 [Arabidopsis...   473  e-132
UniRef100_Q9MF64 Ribosomal protein S3 [Beta vulgaris subsp. vulg...   468  e-130
UniRef100_Q96016 Ribosomal protein S3 [Brassica napus]                462  e-129
UniRef100_P49386 Mitochondrial ribosomal protein S3 [Brassica na...   460  e-128
UniRef100_P46773 Mitochondrial ribosomal protein S3 [Oryza sativa]    452  e-126
UniRef100_Q8HDK9 Ribosomal protein S3 [Magnolia soulangeana]          435  e-121
UniRef100_Q5QJE0 Ribosomal protein S3 [Cycas revoluta]                358  1e-97
UniRef100_P26865 Mitochondrial ribosomal protein S3 [Marchantia ...   132  2e-29
UniRef100_Q9MF63 Orf246 protein [Beta vulgaris subsp. vulgaris]        89  1e-16
UniRef100_Q7YAL0 Ribosomal protein S3 [Chara vulgaris]                 84  5e-15
UniRef100_Q8M1G0 Ribosomal protein S3 [Chaetosphaeridium globosum]     43  0.013
UniRef100_UPI00004393C8 UPI00004393C8 UniRef100 entry                  37  0.72

>UniRef100_UPI00003AFC52 UPI00003AFC52 UniRef100 entry
          Length = 568

 Score =  501 bits (1290), Expect = e-140
 Identities = 253/297 (85%), Positives = 262/297 (88%), Gaps = 11/297 (3%)

Query: 14  GYSHGGVTIDSIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHF 73
           G+SHG VTIDSIYYYGK +YQDVNLRSYF SIRPP RLTFGFRLGRCI++HFPKRTFIHF
Sbjct: 23  GFSHGSVTIDSIYYYGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGRCIILHFPKRTFIHF 82

Query: 74  FLPRRPRRLKRRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVES 133
           FLPRRP RLKRRDKSRPGK+KGRWWAFGKVGPIGCLHSS   +EERNEVRGR AGKRVES
Sbjct: 83  FLPRRPLRLKRRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEERNEVRGRGAGKRVES 142

Query: 134 IRLDDREKQNEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFL 191
           I   DREKQNEIRIWPKK QRYGYHDRSPS KKN SKSLRVSGA  HPKYAG VNDIAFL
Sbjct: 143 I---DREKQNEIRIWPKKMQRYGYHDRSPSRKKNFSKSLRVSGAFKHPKYAGVVNDIAFL 199

Query: 192 IENYDSFRKTKFFKLFF----PRSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHF 247
           IEN DSF KTK FK FF     RSDGPT HL KRTLPAVRPSLNYSVMQYFF  KN+MHF
Sbjct: 200 IENDDSFIKTKLFKFFFLPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYFFNTKNKMHF 259

Query: 248 DPVVVLNHFVAPGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           DPVVVLNHFVAPGVAEPSTMGG  A+G SLDKRIRSRIAFFVESSTS+KKCLA AKK
Sbjct: 260 DPVVVLNHFVAPGVAEPSTMGG--AKGGSLDKRIRSRIAFFVESSTSDKKCLARAKK 314


>UniRef100_Q04716 Mitochondrial ribosomal protein S3 [Petunia hybrida]
          Length = 562

 Score =  494 bits (1271), Expect = e-138
 Identities = 247/284 (86%), Positives = 255/284 (88%), Gaps = 5/284 (1%)

Query: 26  YYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLKRR 85
           YYYGK VYQDVNLRSYFGSIRPP RLTFGFRLGRCI++HFPKRTFIHFFLPRRPRRLKRR
Sbjct: 25  YYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLKRR 84

Query: 86  DKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQNEI 145
           +KSRP KEKGRW AFGKVGPIGCLHSS+  +EERNEVRGR AGKRVESIRLDDREKQNEI
Sbjct: 85  EKSRPVKEKGRWGAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVESIRLDDREKQNEI 144

Query: 146 RIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKTKF 203
           RIWPKKKQ YGYHDRSPSIKKNLSKSLRVSGA  HPKYAG  NDIAFLIEN DSFRKT  
Sbjct: 145 RIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGIENDIAFLIENDDSFRKTNL 204

Query: 204 FKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFVAPG 260
           FK FFP   RSD PT HL KRTLPAVRPSLNYSVMQY    KN++HFDPVVVLNHFVAPG
Sbjct: 205 FKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVMQYLLNTKNKIHFDPVVVLNHFVAPG 264

Query: 261 VAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           VAEPSTMGG NAQGRSLDKRI S IAFFVE+STSEKKCLAEAKK
Sbjct: 265 VAEPSTMGGANAQGRSLDKRIASCIAFFVENSTSEKKCLAEAKK 308


>UniRef100_P27754 Mitochondrial ribosomal protein S3 [Oenothera bertiana]
          Length = 550

 Score =  489 bits (1260), Expect = e-137
 Identities = 244/286 (85%), Positives = 253/286 (88%), Gaps = 5/286 (1%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK VYQDVNLRSYFGSIRPP RLTFGFRLGRCI++HFPKRTFIHFFLPRRPRRLK
Sbjct: 24  SDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLK 83

Query: 84  RRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQN 143
           R  KSRPGKEK RWW FGKVGPIGCLHS++  +EERNEV GR AGKRVESIRLDDREKQN
Sbjct: 84  RGKKSRPGKEKARWWEFGKVGPIGCLHSNDDTEEERNEVGGRGAGKRVESIRLDDREKQN 143

Query: 144 EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKT 201
           EIRIWPKKKQ YGYHDRSPSIKKNLSKSLRVSGA  HPKYAG +NDIAFLIEN DSFRKT
Sbjct: 144 EIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGVLNDIAFLIENDDSFRKT 203

Query: 202 KFFKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFVA 258
           K FK FFP   RSDGPT HL KRT PAVRPSLNYSVMQY+   KNQMHFDP+VVLNHFVA
Sbjct: 204 KLFKFFFPKKSRSDGPTSHLLKRTPPAVRPSLNYSVMQYYLNTKNQMHFDPLVVLNHFVA 263

Query: 259 PGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           PGVAEPSTMGG N QGRS + RIRSRIAFFVESSTSEKK LAE KK
Sbjct: 264 PGVAEPSTMGGANRQGRSNELRIRSRIAFFVESSTSEKKSLAEDKK 309


>UniRef100_Q6R978 Ribosomal protein S3 [Zea mays]
          Length = 559

 Score =  481 bits (1237), Expect = e-134
 Identities = 244/287 (85%), Positives = 252/287 (87%), Gaps = 11/287 (3%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK +YQDVNLRSYF SIRPP RLTFGFRLGRCI++HFPKRTFIHFFLPRRP RLK
Sbjct: 24  SDYYYGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPLRLK 83

Query: 84  RRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQN 143
           RRDKSRPGK+KGRWWAFGKVGPIGCLHSS   +EERNEVRGR AGKRVESI   DREKQN
Sbjct: 84  RRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEERNEVRGRGAGKRVESI---DREKQN 140

Query: 144 EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKT 201
           EIRIWPKK QRYGYHDRSPS KKN SKSLRVSGA  HPKYAG VNDIAFLIEN DSF KT
Sbjct: 141 EIRIWPKKMQRYGYHDRSPSRKKNFSKSLRVSGAFKHPKYAGVVNDIAFLIENDDSFIKT 200

Query: 202 KFFKLFF----PRSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFV 257
           K FK FF     RSDGPT HL KRTLPAVRPSLNYSVMQYFF  KN+MHFDPVVVLNHFV
Sbjct: 201 KLFKFFFLPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYFFNTKNKMHFDPVVVLNHFV 260

Query: 258 APGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           APGVAEPSTMGG  A+G SLDKRIRSRIAFFVESSTS+KKCLA AKK
Sbjct: 261 APGVAEPSTMGG--AKGGSLDKRIRSRIAFFVESSTSDKKCLARAKK 305


>UniRef100_P27928 Mitochondrial ribosomal protein S3 [Zea mays]
          Length = 559

 Score =  479 bits (1234), Expect = e-134
 Identities = 243/287 (84%), Positives = 252/287 (87%), Gaps = 11/287 (3%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK +YQDVNLRSYF SIRPP RLTFGFRLGRCI++HFPKRTFIHFFLPRRP RLK
Sbjct: 24  SDYYYGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPLRLK 83

Query: 84  RRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQN 143
           RRDKSRPGK+KGRWWAFGKVGPIGCLHSS   +EERNEVRGR AGKRVESI   DREKQN
Sbjct: 84  RRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEERNEVRGRGAGKRVESI---DREKQN 140

Query: 144 EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKT 201
           EIRIWPKK QRYGYHDR+PS KKN SKSLRVSGA  HPKYAG VNDIAFLIEN DSF KT
Sbjct: 141 EIRIWPKKMQRYGYHDRTPSRKKNFSKSLRVSGAFKHPKYAGVVNDIAFLIENDDSFIKT 200

Query: 202 KFFKLFF----PRSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFV 257
           K FK FF     RSDGPT HL KRTLPAVRPSLNYSVMQYFF  KN+MHFDPVVVLNHFV
Sbjct: 201 KLFKFFFLPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYFFNTKNKMHFDPVVVLNHFV 260

Query: 258 APGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           APGVAEPSTMGG  A+G SLDKRIRSRIAFFVESSTS+KKCLA AKK
Sbjct: 261 APGVAEPSTMGG--AKGGSLDKRIRSRIAFFVESSTSDKKCLARAKK 305


>UniRef100_Q6YSM0 Ribosomal protein S3 [Brassica napus]
          Length = 553

 Score =  477 bits (1227), Expect = e-133
 Identities = 243/286 (84%), Positives = 252/286 (87%), Gaps = 10/286 (3%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK VYQDVNLRSYFGSIRPP RLTFGFRLGRCIL+HFPKRTFIHFFLPRRPRRLK
Sbjct: 24  SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCILLHFPKRTFIHFFLPRRPRRLK 83

Query: 84  RRDKSRPGKEKGRWW-AFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQ 142
           RR+K+RPGKEKGRWW  FGK GPIGCL      +EERNEVRGR A KRVESIRLDDR+KQ
Sbjct: 84  RREKTRPGKEKGRWWTTFGKAGPIGCLRDDT--EEERNEVRGRGARKRVESIRLDDRKKQ 141

Query: 143 NEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRK 200
           NEIR WPKKKQRYGYHDRSPSIKKNLSKSLR+SGA  HPKYAG VNDIAFLIEN DSFRK
Sbjct: 142 NEIRGWPKKKQRYGYHDRSPSIKKNLSKSLRISGAFKHPKYAGVVNDIAFLIENDDSFRK 201

Query: 201 TKFFKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFV 257
           TK FK FFP   RSDGPT +L  RTLPAVRPSLN+ VMQYFF  KNQM+FDPVVVLNHFV
Sbjct: 202 TKLFKFFFPKKSRSDGPTSYL--RTLPAVRPSLNFLVMQYFFNTKNQMNFDPVVVLNHFV 259

Query: 258 APGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAK 303
           APG AEPSTMG  NAQGRSL KRIRSRIAFFVESSTSEKKCLAEAK
Sbjct: 260 APGAAEPSTMGRANAQGRSLQKRIRSRIAFFVESSTSEKKCLAEAK 305


>UniRef100_Q5U6C3 Ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
          Length = 551

 Score =  474 bits (1219), Expect = e-132
 Identities = 235/284 (82%), Positives = 248/284 (86%), Gaps = 5/284 (1%)

Query: 26  YYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLKRR 85
           YYYGKLVYQD+NLRSYFGSIRPP RLTFGFRLGRCI+IHF KRTFI+FFLPRRP+R KRR
Sbjct: 26  YYYGKLVYQDINLRSYFGSIRPPTRLTFGFRLGRCIIIHFQKRTFINFFLPRRPQRRKRR 85

Query: 86  DKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQNEI 145
            KSRPGK KGRWW  GKVGPI CL+SS  + EERNEVR RRAGKRVESIRLDD++KQNEI
Sbjct: 86  KKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERNEVRDRRAGKRVESIRLDDQKKQNEI 145

Query: 146 RIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKTKF 203
           R+WPKKKQRYGYHDRSPSIKKNLSKSLRVSGA  HPKYA  VNDIAFLIEN  SF+KTK 
Sbjct: 146 RVWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKYAEVVNDIAFLIENDSSFKKTKL 205

Query: 204 FKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFVAPG 260
           FK FFP   R DGPT HL KRTLPAVRPSLNYSVMQY    K +MHFDPV+VLNHFVAPG
Sbjct: 206 FKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHFDPVLVLNHFVAPG 265

Query: 261 VAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           V EPSTM   NAQG SLDKRIRSRIAFFVESSTS+KKCLAEAKK
Sbjct: 266 VVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQKKCLAEAKK 309


>UniRef100_Q8HHY2 Ribosomal protein S3 [Helianthus annuus]
          Length = 560

 Score =  473 bits (1217), Expect = e-132
 Identities = 241/290 (83%), Positives = 250/290 (86%), Gaps = 12/290 (4%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK VYQDVNLRSYFGSIRPP RLTFGFRLGRCI++HFPKRTFIHFFLPRRPRR K
Sbjct: 24  SDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRQK 83

Query: 84  RRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQN 143
           RR+KSRPGK KG+WWAFGKVGPIGCLHSS+  +EERNEVRGR AGKRVESIRLDDREKQN
Sbjct: 84  RREKSRPGKGKGQWWAFGKVGPIGCLHSSDGTEEERNEVRGRGAGKRVESIRLDDREKQN 143

Query: 144 EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKT 201
           EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA  HPKYAG VNDIA L  N DSFRKT
Sbjct: 144 EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKYAGLVNDIALL--NDDSFRKT 201

Query: 202 KFFKLFFPR------SDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNH 255
           K FK FF +      SD PT H  KRTLPAVRPSLNYSVMQY    KNQMHFDPVVVLNH
Sbjct: 202 KLFKFFFSKKSKKSPSDSPTSHPLKRTLPAVRPSLNYSVMQYLLKTKNQMHFDPVVVLNH 261

Query: 256 FVAPGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKKV 305
           FV PGV EPSTMGG +AQGRSLDKRI  R AFFVESSTSEKK LAE KK+
Sbjct: 262 FVEPGVVEPSTMGGAHAQGRSLDKRI--RFAFFVESSTSEKKFLAEDKKL 309


>UniRef100_Q95749 Mitochondrial ribosomal protein S3 [Arabidopsis thaliana]
          Length = 556

 Score =  473 bits (1216), Expect = e-132
 Identities = 239/286 (83%), Positives = 252/286 (87%), Gaps = 8/286 (2%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK VYQDVNLRSYFGSIRPP RLTFGFRLGRCI++HFPKRTFIHFFLPRRPRRLK
Sbjct: 24  SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLK 83

Query: 84  RRDKSRPGKEKGRWW-AFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQ 142
           RR+K+RPGKEKGRWW  FGK GPI CLHSS+  +EERNEVRGR A KRVESIRLDDR+KQ
Sbjct: 84  RREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTEEERNEVRGRGARKRVESIRLDDRKKQ 143

Query: 143 NEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRK 200
           NEIR WPKKKQRYGYHDR PSIKKNLSK LR+SGA  HPKYAG VNDIAFLIEN DSF+K
Sbjct: 144 NEIRGWPKKKQRYGYHDRLPSIKKNLSKLLRISGAFKHPKYAGVVNDIAFLIENDDSFKK 203

Query: 201 TKFFKLFF---PRSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFV 257
           TK FKLFF    RSDGPT +L  RTLPAVRPSLN+ VMQYFF  KNQ++FDPVVVLNHFV
Sbjct: 204 TKLFKLFFQNKSRSDGPTSYL--RTLPAVRPSLNFLVMQYFFNTKNQINFDPVVVLNHFV 261

Query: 258 APGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAK 303
           APG AEPSTMG  NAQGRSL KRIRSRIAFFVES TSEKKCLAEAK
Sbjct: 262 APGAAEPSTMGRANAQGRSLQKRIRSRIAFFVESLTSEKKCLAEAK 307


>UniRef100_Q9MF64 Ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
          Length = 551

 Score =  468 bits (1203), Expect = e-130
 Identities = 233/284 (82%), Positives = 246/284 (86%), Gaps = 5/284 (1%)

Query: 26  YYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLKRR 85
           YYY KLVYQD+NLRSYFGSIRPP RLTFGFRLGRCI+IHF KRTFI+FFLPRRP+R KRR
Sbjct: 26  YYYSKLVYQDLNLRSYFGSIRPPTRLTFGFRLGRCIIIHFQKRTFINFFLPRRPQRRKRR 85

Query: 86  DKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQNEI 145
            KSRPGK KGRWW  GKVGPI CL+SS  + EERNEVR RRAGKRVESIRLDD++KQNEI
Sbjct: 86  KKSRPGKTKGRWWELGKVGPIECLYSSEGRKEERNEVRDRRAGKRVESIRLDDQKKQNEI 145

Query: 146 RIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKTKF 203
           R+WPKKKQRYGYHDRSPSIKKNLSKSLRVSGA  HPKYA  VNDIAFLIEN  SF+KTK 
Sbjct: 146 RVWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKYAEVVNDIAFLIENDSSFKKTKL 205

Query: 204 FKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFVAPG 260
           FK FFP   R DGPT HL KRTLPAVRPSLNYSVMQY    K +MH DPV+VLNHFVAPG
Sbjct: 206 FKFFFPKKSRYDGPTSHLLKRTLPAVRPSLNYSVMQYLLNTKKKMHSDPVLVLNHFVAPG 265

Query: 261 VAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           V EPSTM   NAQG SLDKRIRSRIAFFVESSTS+KKCLAEAKK
Sbjct: 266 VVEPSTMNRANAQGGSLDKRIRSRIAFFVESSTSQKKCLAEAKK 309


>UniRef100_Q96016 Ribosomal protein S3 [Brassica napus]
          Length = 530

 Score =  462 bits (1190), Expect = e-129
 Identities = 237/285 (83%), Positives = 247/285 (86%), Gaps = 11/285 (3%)

Query: 26  YYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLKRR 85
           YYYGK VYQDVNLRSYFGSIRPP RLTFGFRLGRCIL+HFPKRTFIHFFLPRRPRRLKRR
Sbjct: 1   YYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCILLHFPKRTFIHFFLPRRPRRLKRR 60

Query: 86  DKSRPGKEKGRWW-AFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQNE 144
           +K+RPGKEKGRWW  FGK GPIGCL      +EERNEVRGR A KRVESIRLDDR+KQNE
Sbjct: 61  EKTRPGKEKGRWWTTFGKAGPIGCLRDDT--EEERNEVRGRGARKRVESIRLDDRKKQNE 118

Query: 145 IRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKTK 202
           IR WPKKKQRYGYHDR+PSIKKNLSKSLR+SGA  HPKY G VNDIAFLIEN DSFRKTK
Sbjct: 119 IRGWPKKKQRYGYHDRTPSIKKNLSKSLRISGAFKHPKYGGVVNDIAFLIENDDSFRKTK 178

Query: 203 FFKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFVAP 259
            FK FFP   RSDGPT +L  RTLPAV PSLN+ VMQYFF  KNQM+FDPVVVLNHFVAP
Sbjct: 179 LFKFFFPKKSRSDGPTSYL--RTLPAVGPSLNFLVMQYFFNTKNQMNFDPVVVLNHFVAP 236

Query: 260 GVAEPSTMGGTNAQG-RSLDKRIRSRIAFFVESSTSEKKCLAEAK 303
           G AEPSTMG  N  G RSL KRIRSRIAFFVESSTSEKKCLAEAK
Sbjct: 237 GAAEPSTMGRANGTGDRSLQKRIRSRIAFFVESSTSEKKCLAEAK 281


>UniRef100_P49386 Mitochondrial ribosomal protein S3 [Brassica napus]
          Length = 555

 Score =  460 bits (1183), Expect = e-128
 Identities = 237/287 (82%), Positives = 247/287 (85%), Gaps = 11/287 (3%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK VYQDVNLRSYFGSIRPP RLTFGFRLGRCIL+HFPKRTFIHFFLPRRPRRLK
Sbjct: 24  SEYYYGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGRCILLHFPKRTFIHFFLPRRPRRLK 83

Query: 84  RRDKSRPGKEKGRWWAF-GKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQ 142
           RR+K+RPGKEKGRWW   GK GPIGCL      +EERNEVRGR A KRVESIRLDDR+KQ
Sbjct: 84  RREKTRPGKEKGRWWTTPGKAGPIGCLRDDT--EEERNEVRGRGARKRVESIRLDDRKKQ 141

Query: 143 NEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRK 200
           NEIR WPKKKQRYGYHDR+PSIKKNLSKSLR+SGA  HPKY G VNDIAFLIEN DSFRK
Sbjct: 142 NEIRGWPKKKQRYGYHDRTPSIKKNLSKSLRISGAFKHPKYGGVVNDIAFLIENDDSFRK 201

Query: 201 TKFFKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFV 257
           TK FK FFP   RSDGPT +L  RTLPAV PSLN+ VMQYFF  KNQM+FDPVVVLNHFV
Sbjct: 202 TKLFKFFFPKKSRSDGPTSYL--RTLPAVGPSLNFLVMQYFFNTKNQMNFDPVVVLNHFV 259

Query: 258 APGVAEPSTMGGTNAQG-RSLDKRIRSRIAFFVESSTSEKKCLAEAK 303
           APG AEPSTMG  N  G RSL KRIRSRIAFFVESSTSEKKCLAEAK
Sbjct: 260 APGAAEPSTMGRANGTGDRSLQKRIRSRIAFFVESSTSEKKCLAEAK 306


>UniRef100_P46773 Mitochondrial ribosomal protein S3 [Oryza sativa]
          Length = 538

 Score =  452 bits (1163), Expect = e-126
 Identities = 232/283 (81%), Positives = 239/283 (83%), Gaps = 24/283 (8%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK +YQDVNLRSYF SIRPP  LTFGFRLGRCI++HFPKRTFIHFFLPRRP RLK
Sbjct: 24  SDYYYGKSLYQDVNLRSYFSSIRPPTILTFGFRLGRCIILHFPKRTFIHFFLPRRPLRLK 83

Query: 84  RRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQN 143
           RRDKSRPGK+KGRWWAFGKVGPIGCLHSS   +EERNEVRGR AGKRVESI   DREKQN
Sbjct: 84  RRDKSRPGKDKGRWWAFGKVGPIGCLHSSEGTEEERNEVRGRGAGKRVESI---DREKQN 140

Query: 144 EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKT 201
           EIRIWPKK QRYGYHDRSPS KKN SKSLRVSGA  HPKYAG VNDIAFLIEN       
Sbjct: 141 EIRIWPKKMQRYGYHDRSPSRKKNFSKSLRVSGAFKHPKYAGVVNDIAFLIEN------- 193

Query: 202 KFFKLFFPRSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFVAPGV 261
                     DGPT HL KRTLPAVRPSLNYSVMQYFF  KN+MHFDPVVVLNHFVAPGV
Sbjct: 194 ----------DGPTSHLLKRTLPAVRPSLNYSVMQYFFNTKNKMHFDPVVVLNHFVAPGV 243

Query: 262 AEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           AEPSTMGG  A+G SLDKRIRSRIAFFVESSTSEKKCLA AKK
Sbjct: 244 AEPSTMGG--AKGGSLDKRIRSRIAFFVESSTSEKKCLARAKK 284


>UniRef100_Q8HDK9 Ribosomal protein S3 [Magnolia soulangeana]
          Length = 523

 Score =  435 bits (1118), Expect = e-121
 Identities = 227/286 (79%), Positives = 231/286 (80%), Gaps = 34/286 (11%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGK VYQDVNLRSYFGSIRPP RLTFGFRLGRCI++HFPKRTFIHFFLPRRPRRLK
Sbjct: 24  SDYYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGRCIILHFPKRTFIHFFLPRRPRRLK 83

Query: 84  RRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQN 143
           RRDKSRPG                              VRGR AGKRVESIRLDDREKQN
Sbjct: 84  RRDKSRPGN-----------------------------VRGRGAGKRVESIRLDDREKQN 114

Query: 144 EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGA--HPKYAGAVNDIAFLIENYDSFRKT 201
           EIRIWPKKKQRYGYHDRSPS KKNLSKSLRVSGA  HPKYAG VNDIAFLIEN DS RKT
Sbjct: 115 EIRIWPKKKQRYGYHDRSPSRKKNLSKSLRVSGAFKHPKYAGVVNDIAFLIENDDSSRKT 174

Query: 202 KFFKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVVVLNHFVA 258
           K FK FFP   RS GPT HL KRTLPAVRPSLNYSVMQY +  KN+MHFDPVVVLNHFVA
Sbjct: 175 KLFKFFFPKKSRSGGPTSHLLKRTLPAVRPSLNYSVMQYLWNTKNKMHFDPVVVLNHFVA 234

Query: 259 PGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVESSTSEKKCLAEAKK 304
           PGVAEPSTMGG N QG SLDKRIRSRI FFVESSTSEKKCLAEAKK
Sbjct: 235 PGVAEPSTMGGANEQGGSLDKRIRSRIGFFVESSTSEKKCLAEAKK 280


>UniRef100_Q5QJE0 Ribosomal protein S3 [Cycas revoluta]
          Length = 579

 Score =  358 bits (918), Expect = 1e-97
 Identities = 207/303 (68%), Positives = 226/303 (74%), Gaps = 30/303 (9%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGKLVYQDVNLR YFGSIRPP R TFGFRLGRCI+ HF KRTFIH FLPRRPRRLK
Sbjct: 24  SDYYYGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGRCIIHHFTKRTFIHLFLPRRPRRLK 83

Query: 84  RRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRR--AGKRVESIRLDDR-- 139
           RR KSRPG  KGRWWAFGKV  IG     +  +EERNEVRGRR  AGK V+SIRLDDR  
Sbjct: 84  RRGKSRPG--KGRWWAFGKVRSIG---PDDGTEEERNEVRGRRRGAGKTVKSIRLDDRTG 138

Query: 140 EKQNEIRIWPKKKQRYGYHDRSPSIKKNLSK--SLRVSGAHP---KYAGA----VNDIAF 190
           E++NE+RIWP+KKQRYGYHDRSPS +KNLSK  S  ++  HP   KYA      VNDIAF
Sbjct: 139 EERNEVRIWPRKKQRYGYHDRSPSRQKNLSKWVSGWMAYKHPMSGKYAAKKRQYVNDIAF 198

Query: 191 LIENYD-SFRKTKFFKLFFP---RSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMH 246
            IE+    F KTKFFK  FP   RSDGPT     +T+PAVRPS NY VMQYFF  KNQ+H
Sbjct: 199 SIEDDTYVFGKTKFFKFLFPKKFRSDGPTSKRLLQTIPAVRPSFNYLVMQYFFHMKNQIH 258

Query: 247 FDP--VVVLNHFVAPGVAEPSTMGGTNAQGRSLDKRIRSRIAFFVES---STSEKKCLAE 301
           FDP  VVVLN+ VAPGVAEP   GG + QG SLDKRIRSRI FFVES    T + + LAE
Sbjct: 259 FDPIDVVVLNNLVAPGVAEP---GGADEQGGSLDKRIRSRIGFFVESLTAKTEQGEFLAE 315

Query: 302 AKK 304
           AKK
Sbjct: 316 AKK 318


>UniRef100_P26865 Mitochondrial ribosomal protein S3 [Marchantia polymorpha]
          Length = 430

 Score =  132 bits (331), Expect = 2e-29
 Identities = 105/259 (40%), Positives = 131/259 (50%), Gaps = 56/259 (21%)

Query: 24  SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFLPRRPRRLK 83
           S YYYGKL+YQD+N R YFGSIRPP   TFGFRLGRCI+ HFPKRTFIH F       L 
Sbjct: 24  SDYYYGKLLYQDLNFRDYFGSIRPPTGNTFGFRLGRCIIHHFPKRTFIHVFF------LD 77

Query: 84  RRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLDDREKQN 143
           R  +SR    +G          +G + S                 K +  I  +  +++N
Sbjct: 78  RLSQSR---HQG----------LGAIPSV----------------KLIRRINDNTVKQRN 108

Query: 144 EIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAHPKYAGAVNDIAFLIENYD--SFRKT 201
           E+ IWPKK  RY YHDR PSI+K + + LRVS            I    EN D  +  + 
Sbjct: 109 EVGIWPKK--RYEYHDRLPSIQK-IDQLLRVSDWMADIHSTFQSIWPKDENDDRRASEER 165

Query: 202 KFFKLFFP------RSD------GPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDP 249
             F  F P      R++      G  G  F  T    R  L+Y VMQYFF  KNQ+ FDP
Sbjct: 166 YAFSRFAPSILVAVRAEKKKAIFGSEGDFFGFT---GRAFLDYFVMQYFFNLKNQIQFDP 222

Query: 250 VVVLNHFVAPGVAEPSTMG 268
           +V  +  VA GVA+ S +G
Sbjct: 223 MVNRSP-VAQGVAKTSMIG 240


>UniRef100_Q9MF63 Orf246 protein [Beta vulgaris subsp. vulgaris]
          Length = 246

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 41/50 (82%), Positives = 44/50 (88%)

Query: 26 YYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIHFPKRTFIHFFL 75
          YYYGKLVYQD+NLRSY GSIRPP RLTFG R GRCI+IH  KRTFI+FFL
Sbjct: 26 YYYGKLVYQDLNLRSYVGSIRPPTRLTFGSRPGRCIIIHCQKRTFINFFL 75


>UniRef100_Q7YAL0 Ribosomal protein S3 [Chara vulgaris]
          Length = 270

 Score = 84.0 bits (206), Expect = 5e-15
 Identities = 41/68 (60%), Positives = 50/68 (73%), Gaps = 2/68 (2%)

Query: 24 SIYYYGKLVYQDVNLRSYFGSIRPP-ARLTFGFRLGRCILIHFPKRTFIH-FFLPRRPRR 81
          S YYYG+L+YQD+N+R YFGSIRPP     FGFR GRC++ HFPKRT IH FFL R  ++
Sbjct: 24 SDYYYGELLYQDLNIREYFGSIRPPMGAQVFGFRPGRCVIHHFPKRTLIHLFFLSRTLQK 83

Query: 82 LKRRDKSR 89
           K   K+R
Sbjct: 84 SKTNPKNR 91



 Score = 39.3 bits (90), Expect = 0.14
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 198 FRKTKFFKLFF------PRSDGPTGHLFKRTLPAVRPSLNYSVMQYFFCRKNQMHFDPVV 251
           F K     LFF           P    F ++   ++ +++Y VMQYFF  KN++ FDP  
Sbjct: 66  FPKRTLIHLFFLSRTLQKSKTNPKNRSFDQSSKLIKHAIDYFVMQYFFYAKNRLKFDPAS 125

Query: 252 VLNHFV 257
            L  FV
Sbjct: 126 ALIGFV 131


>UniRef100_Q8M1G0 Ribosomal protein S3 [Chaetosphaeridium globosum]
          Length = 324

 Score = 42.7 bits (99), Expect = 0.013
 Identities = 30/63 (47%), Positives = 36/63 (56%), Gaps = 12/63 (19%)

Query: 24 SIYYYGKLVYQDVNLRSYFGSIRPPARLTFGFRLGRCILIH--FPKRTFIHFF-LPRRPR 80
          S YYY KL+Y+D+NLR YF SI           + RCI IH  F   T IH F LPR+ R
Sbjct: 24 SDYYYTKLLYEDLNLREYFNSIHK--------MVTRCI-IHRSFGLYTCIHLFCLPRKRR 74

Query: 81 RLK 83
          + K
Sbjct: 75 KHK 77


>UniRef100_UPI00004393C8 UPI00004393C8 UniRef100 entry
          Length = 255

 Score = 37.0 bits (84), Expect = 0.72
 Identities = 29/79 (36%), Positives = 40/79 (49%), Gaps = 3/79 (3%)

Query: 78  RPRRLKRRDKSRPGKEKGRWWAFGKVGPIGCLHSSNKKDEERNEVRGRRAGKRVESIRLD 137
           R R+ KRR K R  K K       K           K+DE+R+E+R RR  KR E+ R +
Sbjct: 3   RRRKEKRRKKKRGEKRKDEK---RKEEKKETGRREKKQDEKRDEMRKRRDEKRKETKRKE 59

Query: 138 DREKQNEIRIWPKKKQRYG 156
             EK++E R   K++ R G
Sbjct: 60  IGEKKDEKRETRKEEMRRG 78


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.323    0.140    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 574,853,526
Number of Sequences: 2790947
Number of extensions: 24253449
Number of successful extensions: 57089
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 56977
Number of HSP's gapped (non-prelim): 55
length of query: 322
length of database: 848,049,833
effective HSP length: 127
effective length of query: 195
effective length of database: 493,599,564
effective search space: 96251914980
effective search space used: 96251914980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)