BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144375.7 - phase: 0
(123 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_P93704 HMG-1 [Canavalia gladiata] 128 3e-29
UniRef100_O49596 HMG protein [Arabidopsis thaliana] 123 1e-27
UniRef100_P26585 HMG1/2-like protein [Glycine max] 121 4e-27
UniRef100_Q40094 High mobility group protein 2 HMG2 [Ipomoea nil] 120 5e-27
UniRef100_O04692 DNA-binding protein [Nicotiana tabacum] 120 7e-27
UniRef100_P40620 HMG1/2-like protein [Vicia faba] 120 7e-27
UniRef100_P93047 HMG1 protein [Arabidopsis thaliana] 119 2e-26
UniRef100_Q9LM85 F2D10.18 [Arabidopsis thaliana] 119 2e-26
UniRef100_Q676W2 HMG transcription factor [Hyacinthus orientalis] 118 3e-26
UniRef100_P40619 HMG1/2-like protein [Ipomoea nil] 118 3e-26
UniRef100_O49595 HMG protein [Arabidopsis thaliana] 117 6e-26
UniRef100_Q41026 HMG 1 protein [Pisum sativum] 116 1e-25
UniRef100_O49948 High mobility group protein [Solanum tuberosum] 114 4e-25
UniRef100_O04418 HMGd1 protein [Zea mays] 110 1e-23
UniRef100_Q8W512 HMG-like nucleosome/chromatin assembly factor D... 108 2e-23
UniRef100_P40621 HMG1/2-like protein [Triticum aestivum] 108 2e-23
UniRef100_Q5Z7N3 HMGB1 [Oryza sativa] 108 4e-23
UniRef100_Q69MM2 Putative HMGd1 [Oryza sativa] 107 8e-23
UniRef100_P27347 DNA-binding protein MNB1B [Zea mays] 106 1e-22
UniRef100_Q43481 HMG1/2-like protein [Hordeum vulgare] 105 2e-22
>UniRef100_P93704 HMG-1 [Canavalia gladiata]
Length = 141
Score = 128 bits (322), Expect = 3e-29
Identities = 66/119 (55%), Positives = 86/119 (71%), Gaps = 13/119 (10%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
KKA DP+KPKRP S FF+FMS+FR +++KE+P NK V+VVGKA G+KW+S+SDAEK
Sbjct: 28 KKAAKDPNKPKRPPSAFFVFMSEFREQYKKEHPTNKSVAVVGKAGGDKWKSLSDAEKAPF 87
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
KKK EY K+I AYN+K+ GK S + KS SE+ND+D+D EEE++DDE
Sbjct: 88 VARAEKKKEEYDKSILAYNRKLEGKNPSEEEKSDKSKSEVNDEDED-----EEEDQDDE 141
>UniRef100_O49596 HMG protein [Arabidopsis thaliana]
Length = 144
Score = 123 bits (308), Expect = 1e-27
Identities = 64/117 (54%), Positives = 82/117 (69%), Gaps = 9/117 (7%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
K A DP+KPKRP S FF+FM DFR F+KENP NK V+ VGKAAG+KW+S+SD+EK
Sbjct: 29 KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPY 88
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
K+K+EY K I AYNKK+ +S KS SE+ND+DD +D +EEEE++D
Sbjct: 89 VAKAEKRKVEYEKNIKAYNKKLEEGPKEDEES-DKSVSEVNDEDDAEDGSEEEEDDD 144
>UniRef100_P26585 HMG1/2-like protein [Glycine max]
Length = 152
Score = 121 bits (303), Expect = 4e-27
Identities = 63/117 (53%), Positives = 81/117 (68%), Gaps = 9/117 (7%)
Query: 5 KAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK---- 60
KA DP+KPKRP S FF+FM +FR F KE+P+NK VS VGKAAG KW++MSDAEK
Sbjct: 36 KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYV 95
Query: 61 ----KKKMEYVKAIHAYNKKVA-GKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
K+K+EY K + AYNKK A G + KS SE+ND+DDD++ + EEE++D
Sbjct: 96 AKSEKRKVEYEKNMRAYNKKQAEGPTGGDEEESEKSVSEVNDEDDDEEGSGEEEDDD 152
>UniRef100_Q40094 High mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 120 bits (302), Expect = 5e-27
Identities = 56/119 (47%), Positives = 87/119 (73%), Gaps = 9/119 (7%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
KK+ DP+KPKRP S FF+FM DFR +++++P+NK V+ VGKA G+KW+ ++DAEK
Sbjct: 27 KKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPF 86
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
K+K EY K++ AYN+K AG+ + +S KS SE+NDD++D+D + E++++DD+
Sbjct: 87 IAKAEKRKQEYEKSMQAYNRKQAGEAADEEES-DKSRSEVNDDEEDEDGSAEDDDDDDD 144
>UniRef100_O04692 DNA-binding protein [Nicotiana tabacum]
Length = 142
Score = 120 bits (301), Expect = 7e-27
Identities = 59/118 (50%), Positives = 80/118 (67%), Gaps = 10/118 (8%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
KKA DP+KPKRP S FF+FM +FR +++++P+NK V+ VGKA G+ W+ +S+AEK
Sbjct: 27 KKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPY 86
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDD 113
K+K EY K + AYN+K AG KS SE++DDDD+DDD EEEE+DD
Sbjct: 87 QAKAEKRKAEYQKNMDAYNRKQAGDAEEDESD--KSKSEVHDDDDEDDDGSEEEEDDD 142
>UniRef100_P40620 HMG1/2-like protein [Vicia faba]
Length = 149
Score = 120 bits (301), Expect = 7e-27
Identities = 57/118 (48%), Positives = 83/118 (70%), Gaps = 10/118 (8%)
Query: 2 ARKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK- 60
A+ K DP+KPKRP S FF+FM+DFR +++K++P+NK V+ VGKA GE+W+S+S+ EK
Sbjct: 34 AKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKA 93
Query: 61 -------KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEE 111
KKK EY + AYNKK+ GK G KS SE+ND+D+D++D E+E+++
Sbjct: 94 PYVDRALKKKEEYEITLQAYNKKLEGKDDEEGSD--KSKSEVNDEDEDEEDEEDEDDD 149
>UniRef100_P93047 HMG1 protein [Arabidopsis thaliana]
Length = 141
Score = 119 bits (298), Expect = 2e-26
Identities = 61/117 (52%), Positives = 82/117 (69%), Gaps = 9/117 (7%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
K A DP+KPKRP S FF+FM DFRV +++E+P NK V+ VGKA GEKW+S+SD+EK
Sbjct: 26 KGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPY 85
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
K+K+EY K + AYNKK+ +S KS SE+ND+DD +D +EEEE++D
Sbjct: 86 VAKADKRKVEYEKNMKAYNKKLEEGPKEDEES-DKSVSEVNDEDDAEDGSEEEEDDD 141
>UniRef100_Q9LM85 F2D10.18 [Arabidopsis thaliana]
Length = 662
Score = 119 bits (298), Expect = 2e-26
Identities = 61/117 (52%), Positives = 82/117 (69%), Gaps = 9/117 (7%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
K A DP+KPKRP S FF+FM DFRV +++E+P NK V+ VGKA GEKW+S+SD+EK
Sbjct: 547 KGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPY 606
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEED 112
K+K+EY K + AYNKK+ +S KS SE+ND+DD +D +EEEE++D
Sbjct: 607 VAKADKRKVEYEKNMKAYNKKLEEGPKEDEES-DKSVSEVNDEDDAEDGSEEEEDDD 662
Score = 116 bits (291), Expect = 1e-25
Identities = 62/115 (53%), Positives = 78/115 (66%), Gaps = 9/115 (7%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
K A DP+KPKRP S FF+FM DFR F+KENP NK V+ VGKAAG+KW+S+SD+EK
Sbjct: 406 KAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLSDSEKAPY 465
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEE 110
K+K+EY K I AYNKK+ +S KS SE+ND+DD +D +EE E
Sbjct: 466 VAKAEKRKVEYEKNIKAYNKKLEEGPKEDEES-DKSVSEVNDEDDAEDGSEEVSE 519
>UniRef100_Q676W2 HMG transcription factor [Hyacinthus orientalis]
Length = 158
Score = 118 bits (296), Expect = 3e-26
Identities = 62/126 (49%), Positives = 87/126 (68%), Gaps = 14/126 (11%)
Query: 3 RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK-- 60
+ KA DP+KPKRP S FF+FM DFR +F+++NP+NK VSVVGKA KW++MS AEK
Sbjct: 33 KSKAVKDPNKPKRPPSAFFVFMEDFRKQFKEKNPNNKQVSVVGKACWGKWKTMSAAEKAP 92
Query: 61 ------KKKMEYVKAIHAYNKKVA---GKKSS---SGKSFVKSNSELNDDDDDDDDNEEE 108
K+K +Y K + AYNKK + GKKS+ + KS SE++DD+DDD+ +++
Sbjct: 93 FEARAAKRKADYNKVMVAYNKKQSEGGGKKSAEEEDDEESDKSKSEVHDDEDDDESGDDD 152
Query: 109 EEEDDE 114
+E+DDE
Sbjct: 153 DEDDDE 158
>UniRef100_P40619 HMG1/2-like protein [Ipomoea nil]
Length = 144
Score = 118 bits (295), Expect = 3e-26
Identities = 59/119 (49%), Positives = 82/119 (68%), Gaps = 9/119 (7%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
KKA DP+KPKRP S FF+FM DFR +++++P+NK V+VVGKA G+KW+ ++ AEK
Sbjct: 27 KKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPF 86
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDDE 114
K+K EY K + AYNKK A + +S KS SE+NDDD+D D + E++ EDD+
Sbjct: 87 ISKAEKRKQEYEKNLQAYNKKQAAGAAEEEES-DKSRSEVNDDDEDQDGSGEDDSEDDD 144
>UniRef100_O49595 HMG protein [Arabidopsis thaliana]
Length = 178
Score = 117 bits (293), Expect = 6e-26
Identities = 66/131 (50%), Positives = 80/131 (60%), Gaps = 24/131 (18%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
KKAK DP+KPKR S FF+F+ DFRV F+KENP+ K VS VGKA G+KW+SMS AEK
Sbjct: 44 KKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPY 103
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDD------------D 103
K+K EY K + AYNK + S KS SE+ND+D+ D
Sbjct: 104 EEKAAKRKAEYEKQMDAYNKNLEEGSDES----EKSRSEINDEDEASGEEELLEKEAAGD 159
Query: 104 DNEEEEEEDDE 114
D EEEEEEDD+
Sbjct: 160 DEEEEEEEDDD 170
>UniRef100_Q41026 HMG 1 protein [Pisum sativum]
Length = 154
Score = 116 bits (291), Expect = 1e-25
Identities = 60/121 (49%), Positives = 79/121 (64%), Gaps = 8/121 (6%)
Query: 2 ARKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK- 60
A+ K DP+KPKRP S FF+FM DFR +F+K N DNK VS VGKAAG KW+SM++AEK
Sbjct: 34 AKGKEPKDPNKPKRPPSAFFVFMEDFRKQFKKGNADNKAVSAVGKAAGAKWKSMTEAEKA 93
Query: 61 -------KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEEDD 113
K+K EY K++ +YNKK A ++ + SE D++DD+ E EEE+DD
Sbjct: 94 PYAAKAEKRKAEYEKSMKSYNKKQAEGPAAVEEEEESEKSESEVHDENDDEEESEEEDDD 153
Query: 114 E 114
E
Sbjct: 154 E 154
>UniRef100_O49948 High mobility group protein [Solanum tuberosum]
Length = 141
Score = 114 bits (286), Expect = 4e-25
Identities = 56/116 (48%), Positives = 82/116 (70%), Gaps = 9/116 (7%)
Query: 4 KKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK--- 60
K A DP+KPKRP S FF+FM +FR +++++P+NK V+VVGKA G+KW+ +SD EK
Sbjct: 27 KNAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPY 86
Query: 61 -----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDDNEEEEEE 111
K+K EY K + AYNKK+A + +S KS SE++DDD+DDD +E+E+++
Sbjct: 87 QAKAEKRKAEYQKNMDAYNKKLAAGDADDEES-DKSKSEVHDDDEDDDGSEQEDDD 141
>UniRef100_O04418 HMGd1 protein [Zea mays]
Length = 126
Score = 110 bits (274), Expect = 1e-23
Identities = 55/110 (50%), Positives = 78/110 (70%), Gaps = 9/110 (8%)
Query: 3 RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK-- 60
+ KA+ DP+KPKRP S FF+FM +FR +++++P+ K VSV+GKA G+KW+S+SDAEK
Sbjct: 18 KTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSVIGKAGGDKWKSLSDAEKAP 77
Query: 61 ------KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDD 104
K K EY K I AYN K +G ++SG S KS SE+ND+D++ D+
Sbjct: 78 YVSKAEKLKAEYTKKIDAYNNKQSGDPTASGDS-DKSKSEVNDEDEEGDE 126
>UniRef100_Q8W512 HMG-like nucleosome/chromatin assembly factor D [Zea mays]
Length = 126
Score = 108 bits (271), Expect = 2e-23
Identities = 54/110 (49%), Positives = 78/110 (70%), Gaps = 9/110 (8%)
Query: 3 RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK-- 60
+ KA+ DP+KPKRP S FF+FM +FR +++++P+ K VS++GKA G+KW+S+SDAEK
Sbjct: 18 KTKAEKDPNKPKRPPSAFFVFMEEFRKDYKEKHPNVKQVSLIGKAGGDKWKSLSDAEKAP 77
Query: 61 ------KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDD 104
K K EY K I AYN K +G ++SG S KS SE+ND+D++ D+
Sbjct: 78 YVSKAEKLKAEYTKKIDAYNNKQSGDPTASGDS-DKSKSEVNDEDEEGDE 126
>UniRef100_P40621 HMG1/2-like protein [Triticum aestivum]
Length = 161
Score = 108 bits (271), Expect = 2e-23
Identities = 59/128 (46%), Positives = 81/128 (63%), Gaps = 18/128 (14%)
Query: 5 KAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK---- 60
KA DP+KPKR S FF+FM +FR F+++NP NK V+ VGKAAGE+W+S+S++EK
Sbjct: 34 KAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYV 93
Query: 61 ----KKKMEYVKAIHAYNK----KVAGKKSSSGKSFVKSNSELND------DDDDDDDNE 106
K K EY KAI AYNK A K ++ K + + E +D +DDDDD+
Sbjct: 94 AKANKLKGEYNKAIAAYNKGESAAAAAPKKAAAKEVEEEDEEESDKSKSEINDDDDDEGS 153
Query: 107 EEEEEDDE 114
+E+E+DDE
Sbjct: 154 DEDEDDDE 161
>UniRef100_Q5Z7N3 HMGB1 [Oryza sativa]
Length = 157
Score = 108 bits (269), Expect = 4e-23
Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 14/124 (11%)
Query: 5 KAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK---- 60
KA DP+KPKR S FF+FM +FR F+++NP NK V+ VGKAAG++W+S+++A+K
Sbjct: 34 KAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYV 93
Query: 61 ----KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELND------DDDDDDDNEEEEE 110
K K EY KAI AYNK + K + K + + E +D +D+DDD+ EE+E
Sbjct: 94 AKANKLKAEYNKAIAAYNKGESTAKKAPAKEEEEDDEEESDKSKSEVNDEDDDEGSEEDE 153
Query: 111 EDDE 114
+DDE
Sbjct: 154 DDDE 157
>UniRef100_Q69MM2 Putative HMGd1 [Oryza sativa]
Length = 127
Score = 107 bits (266), Expect = 8e-23
Identities = 55/110 (50%), Positives = 75/110 (68%), Gaps = 9/110 (8%)
Query: 3 RKKAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK-- 60
+ KA+ DP+KPKRP S FF+FM FR +++++P+ K VSV+GKA G+KW+SM+DA+K
Sbjct: 18 KTKAEKDPNKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAP 77
Query: 61 ------KKKMEYVKAIHAYNKKVAGKKSSSGKSFVKSNSELNDDDDDDDD 104
K K EY K I AYN K AG ++SG S KS SE+ND+D+ D
Sbjct: 78 FVTKAEKLKAEYTKKIDAYNNKQAGGPATSGDS-DKSKSEVNDEDEGSGD 126
>UniRef100_P27347 DNA-binding protein MNB1B [Zea mays]
Length = 157
Score = 106 bits (264), Expect = 1e-22
Identities = 59/127 (46%), Positives = 82/127 (64%), Gaps = 19/127 (14%)
Query: 5 KAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK---- 60
KA DP+KPKR S FF+FM +FR F+++NP NK V+ VGKAAG++W+S+S+++K
Sbjct: 33 KAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYV 92
Query: 61 ----KKKMEYVKAIHAYNK--KVAGKKS-------SSGKSFVKSNSELNDDDDDDDDNEE 107
K K+EY KAI AYNK A KK+ + KS SE+N D+DD++ E
Sbjct: 93 AKANKLKLEYNKAIAAYNKGESTAAKKAPAKEEEEEDEEESDKSKSEVN--DEDDEEGSE 150
Query: 108 EEEEDDE 114
E+E+DDE
Sbjct: 151 EDEDDDE 157
>UniRef100_Q43481 HMG1/2-like protein [Hordeum vulgare]
Length = 160
Score = 105 bits (262), Expect = 2e-22
Identities = 60/124 (48%), Positives = 79/124 (63%), Gaps = 19/124 (15%)
Query: 5 KAKSDPSKPKRPQSPFFLFMSDFRVRFRKENPDNKYVSVVGKAAGEKWRSMSDAEK---- 60
KA DP+KPKR S FF+FM +FR F+++NP NK V+ VGKAAGE+W+S+S++EK
Sbjct: 34 KAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPFV 93
Query: 61 ----KKKMEYVKAIHAYNK----KVAGKKSSS-------GKSFVKSNSELNDDDDDDDDN 105
K K EY KAI +YNK A KK+SS + KS SE+NDDDDD+ +
Sbjct: 94 AKANKLKGEYNKAIASYNKGESTTAAPKKASSKEVEEEDEEESDKSKSEINDDDDDEGSD 153
Query: 106 EEEE 109
E E+
Sbjct: 154 EAED 157
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.310 0.128 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,565,464
Number of Sequences: 2790947
Number of extensions: 10112155
Number of successful extensions: 334763
Number of sequences better than 10.0: 6830
Number of HSP's better than 10.0 without gapping: 4547
Number of HSP's successfully gapped in prelim test: 2406
Number of HSP's that attempted gapping in prelim test: 225729
Number of HSP's gapped (non-prelim): 46563
length of query: 123
length of database: 848,049,833
effective HSP length: 99
effective length of query: 24
effective length of database: 571,746,080
effective search space: 13721905920
effective search space used: 13721905920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC144375.7