BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC143337.8 - phase: 0
(97 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q08151 GTP-binding protein [Pisum sativum] 181 5e-45
UniRef100_Q40194 Ras-related protein Rab11D [Lotus japonicus] 176 9e-44
UniRef100_Q8LJR5 Small GTP-binding protein [Glycine max] 171 3e-42
UniRef100_Q40195 Ras-related protein Rab11E [Lotus japonicus] 157 4e-38
UniRef100_Q9SCB1 Rab11 GTPase [Lycopersicon esculentum] 150 5e-36
UniRef100_Q01111 Ras-related protein YPT3 [Nicotiana plumbaginif... 147 5e-35
UniRef100_P28185 Ras-related protein ARA-2 [Arabidopsis thaliana] 145 2e-34
UniRef100_Q8LJR6 GTP-binding protein [Glycine max] 144 7e-34
UniRef100_Q7DLK8 Guanine nucleotide regulatory protein [Vicia faba] 141 4e-33
UniRef100_Q6DXU0 Putative GTP-binding protein [Gossypium hirsutum] 141 4e-33
UniRef100_Q40368 Rab protein [Medicago sativa] 140 6e-33
UniRef100_Q94J09 GTP-binding protein GTP1 [Oryza sativa] 140 1e-32
UniRef100_Q8LC05 Guanine nucleotide regulatory protein, putative... 139 1e-32
UniRef100_Q75II9 Putative GTP-binding protein RIC2 [Oryza sativa] 139 1e-32
UniRef100_Q39222 Ras-related protein Rab11 [Arabidopsis thaliana] 139 1e-32
UniRef100_Q6DXS7 Putative GTP-binding protein [Gossypium hirsutum] 139 2e-32
UniRef100_Q5Z939 GTP-binding protein [Oryza sativa] 137 5e-32
UniRef100_P40393 Ras-related protein RIC2 [Oryza sativa] 137 5e-32
UniRef100_Q9SN35 Ras-like GTP-binding protein [Arabidopsis thali... 135 3e-31
UniRef100_Q9FK68 Putative Rab-type small GTP-binding protein [Ar... 134 5e-31
>UniRef100_Q08151 GTP-binding protein [Pisum sativum]
Length = 218
Score = 181 bits (458), Expect = 5e-45
Identities = 91/97 (93%), Positives = 94/97 (96%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAF+EVLSQIY IVSKK
Sbjct: 122 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
AVEAGE GSSS+VPS+GQTINVKEDSSV KRFGCCSN
Sbjct: 182 AVEAGESGSSSAVPSIGQTINVKEDSSVFKRFGCCSN 218
>UniRef100_Q40194 Ras-related protein Rab11D [Lotus japonicus]
Length = 218
Score = 176 bits (447), Expect = 9e-44
Identities = 89/96 (92%), Positives = 93/96 (96%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVL+QIYRIVSK+
Sbjct: 122 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKR 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCS 96
AVEAG+ GSSS +PS GQTINVKEDSSVLKRFGCCS
Sbjct: 182 AVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
>UniRef100_Q8LJR5 Small GTP-binding protein [Glycine max]
Length = 218
Score = 171 bits (434), Expect = 3e-42
Identities = 86/97 (88%), Positives = 92/97 (94%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
MLIGNKSDLRHLVAVPTEDGKSFAE+ESLYFMETSALEATNVENAFTEVLSQIYRIVSK+
Sbjct: 122 MLIGNKSDLRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKR 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
VEAG+ SSS+VPS GQTINVK+DSSVLK+ GCCSN
Sbjct: 182 TVEAGKNASSSAVPSKGQTINVKDDSSVLKKIGCCSN 218
>UniRef100_Q40195 Ras-related protein Rab11E [Lotus japonicus]
Length = 218
Score = 157 bits (398), Expect = 4e-38
Identities = 80/97 (82%), Positives = 88/97 (90%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
MLIGNKSDLRHLV V TEDGK+FAE+ESLYFMETSALEATNVENAF+EVL+QIYRIVSK+
Sbjct: 122 MLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKR 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
AVEAG+ S+S VPS GQTINV EDSSVL R+ CCSN
Sbjct: 182 AVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCSN 218
>UniRef100_Q9SCB1 Rab11 GTPase [Lycopersicon esculentum]
Length = 218
Score = 150 bits (380), Expect = 5e-36
Identities = 73/97 (75%), Positives = 86/97 (88%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV TE+ KS AERE+LYFMETSALEATNVENAFTE L+QIYRIVSKK
Sbjct: 122 MLLGNKSDLRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
AVEAG+ G++S+ P GQTIN+K++ S K+FGCCS+
Sbjct: 182 AVEAGDEGATSTAPPKGQTINIKDEGSAWKKFGCCSS 218
>UniRef100_Q01111 Ras-related protein YPT3 [Nicotiana plumbaginifolia]
Length = 218
Score = 147 bits (372), Expect = 5e-35
Identities = 72/97 (74%), Positives = 84/97 (86%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
MLIGNKSDLRHLVAV T++ K AERE LYFMETSALEATNVENAFTE L+QIYRIVSKK
Sbjct: 122 MLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
AVEAG+ G++SS P G+TIN+K++ S K+FGCCS+
Sbjct: 182 AVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218
>UniRef100_P28185 Ras-related protein ARA-2 [Arabidopsis thaliana]
Length = 216
Score = 145 bits (367), Expect = 2e-34
Identities = 73/97 (75%), Positives = 85/97 (87%), Gaps = 2/97 (2%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
MLIGNK DLRHLVAV TE+ K+FAERESLYFMETSAL+ATNVENAFTEVL+QI++IVSK+
Sbjct: 122 MLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKR 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
+V+ GG S+ +P G+TINVKED SVLKR GCCSN
Sbjct: 182 SVDG--GGESADLPGKGETINVKEDGSVLKRMGCCSN 216
>UniRef100_Q8LJR6 GTP-binding protein [Glycine max]
Length = 217
Score = 144 bits (362), Expect = 7e-34
Identities = 73/97 (75%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV TEDGKS+AE+ESLYFMETSALEATNVENAF EVL+QIY IVSKK
Sbjct: 122 MLVGNKSDLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
AVE E G ++SVP+ G+ I++K D S LKR GCCS+
Sbjct: 182 AVEVAENG-TTSVPAKGEKIDLKNDVSALKRVGCCSS 217
>UniRef100_Q7DLK8 Guanine nucleotide regulatory protein [Vicia faba]
Length = 217
Score = 141 bits (355), Expect = 4e-33
Identities = 71/97 (73%), Positives = 83/97 (85%), Gaps = 1/97 (1%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNK+DLRHLVAV TEDGKS+AE+ESLYFMETSALEATNVENAF EVL+QIY IVSKK
Sbjct: 122 MLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
VE E G ++SVP+ G+ I++K D S LKR GCCS+
Sbjct: 182 TVEGAENG-NASVPAKGEKIDLKNDVSALKRVGCCSS 217
>UniRef100_Q6DXU0 Putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 141 bits (355), Expect = 4e-33
Identities = 70/97 (72%), Positives = 84/97 (86%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV TEDGKSFAE+ESLYFMETSALEATNVE AF EVL+QIY IVSKK
Sbjct: 122 MLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
A+E + G++S+VPS G+ I+V +D S +K+ GCCS+
Sbjct: 182 AMETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>UniRef100_Q40368 Rab protein [Medicago sativa]
Length = 217
Score = 140 bits (354), Expect = 6e-33
Identities = 70/97 (72%), Positives = 85/97 (87%), Gaps = 1/97 (1%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
+L+GNK+DLRHLVAV TEDGKS+AE+ESLYFMETSALEATNVEN+F EVL+QIYRI+SKK
Sbjct: 122 VLVGNKADLRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENSFAEVLTQIYRILSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
AVE E G ++SVP+ G+ I++K D S LKR GCCS+
Sbjct: 182 AVEGAENG-NASVPAKGEKIDLKNDVSALKRVGCCSS 217
>UniRef100_Q94J09 GTP-binding protein GTP1 [Oryza sativa]
Length = 221
Score = 140 bits (352), Expect = 1e-32
Identities = 71/97 (73%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV TEDGK +AE ESLYFMETSAL+ATNVENAF EVL+QIY+ VSKK
Sbjct: 127 MLVGNKSDLRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKK 186
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
VEA + GS++ P G+ INVK+D S LKR GCCSN
Sbjct: 187 TVEASDDGSNA--PIKGEKINVKDDVSALKRIGCCSN 221
>UniRef100_Q8LC05 Guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 139 bits (351), Expect = 1e-32
Identities = 73/97 (75%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHL+AVPTEDGKS+AE+ESL FMETSALEATNVE+AF EVL+QIYRI SKK
Sbjct: 122 MLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
VEAGE G ++SVP G+ I VK D S LK+ GCCSN
Sbjct: 182 QVEAGEDG-NASVPK-GEKIEVKNDVSALKKLGCCSN 216
>UniRef100_Q75II9 Putative GTP-binding protein RIC2 [Oryza sativa]
Length = 220
Score = 139 bits (351), Expect = 1e-32
Identities = 71/97 (73%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
MLIGNKSDLRHLVAV TEDGK FAE ES+YFMETSAL+ATNV+NAF EVL+QIY+IV+KK
Sbjct: 126 MLIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKK 185
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
VEA E GS+ P G+ INVK+D S +KR GCCSN
Sbjct: 186 PVEAPEDGSAG--PGKGEKINVKDDVSAMKRVGCCSN 220
>UniRef100_Q39222 Ras-related protein Rab11 [Arabidopsis thaliana]
Length = 216
Score = 139 bits (351), Expect = 1e-32
Identities = 73/97 (75%), Positives = 83/97 (85%), Gaps = 2/97 (2%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHL+AVPTEDGKS+AE+ESL FMETSALEATNVE+AF EVL+QIYRI SKK
Sbjct: 122 MLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
VEAGE G ++SVP G+ I VK D S LK+ GCCSN
Sbjct: 182 QVEAGEDG-NASVPK-GEKIEVKNDVSALKKLGCCSN 216
>UniRef100_Q6DXS7 Putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 139 bits (350), Expect = 2e-32
Identities = 67/97 (69%), Positives = 84/97 (86%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV TEDGKSFAE+ESLYFMETSALEATNVE +F EVL+QIY ++SKK
Sbjct: 122 MLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
A+E + G++S+VPS G+ I+V +D S +K+ GCCS+
Sbjct: 182 AMETSDDGAASAVPSKGEKIDVGKDVSAMKKGGCCSS 218
>UniRef100_Q5Z939 GTP-binding protein [Oryza sativa]
Length = 217
Score = 137 bits (346), Expect = 5e-32
Identities = 68/96 (70%), Positives = 82/96 (84%), Gaps = 2/96 (2%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV T++GK+FAERESLYFMETSALE+TNVENAF EVL+QIYRIVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCS 96
+VEAG+ S P G+ IN+K+D S +K+ GCCS
Sbjct: 183 SVEAGDDAGSG--PGKGEKINIKDDVSAVKKGGCCS 216
>UniRef100_P40393 Ras-related protein RIC2 [Oryza sativa]
Length = 217
Score = 137 bits (346), Expect = 5e-32
Identities = 68/96 (70%), Positives = 82/96 (84%), Gaps = 2/96 (2%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV T++GK+FAERESLYFMETSALE+TNVENAF EVL+QIYRIVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCS 96
+VEAG+ S P G+ IN+K+D S +K+ GCCS
Sbjct: 183 SVEAGDDAGSG--PGKGEKINIKDDVSAVKKGGCCS 216
>UniRef100_Q9SN35 Ras-like GTP-binding protein [Arabidopsis thaliana]
Length = 214
Score = 135 bits (339), Expect = 3e-31
Identities = 71/97 (73%), Positives = 82/97 (84%), Gaps = 4/97 (4%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV TED KSFAE ESLYFMETSALE+TNVENAF+EVL+QIY +VSKK
Sbjct: 122 MLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
A+EAGE S +VPS G+ I+V D S +K+ GCCSN
Sbjct: 182 AMEAGE--DSGNVPSKGEKIDV--DVSAVKKTGCCSN 214
>UniRef100_Q9FK68 Putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
Length = 216
Score = 134 bits (337), Expect = 5e-31
Identities = 69/97 (71%), Positives = 81/97 (83%), Gaps = 2/97 (2%)
Query: 1 MLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKK 60
ML+GNKSDLRHLVAV TED KSFAE+ESLYFMETSALEATNVENAF EVL+QI+ IVSKK
Sbjct: 122 MLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKK 181
Query: 61 AVEAGEGGSSSSVPSVGQTINVKEDSSVLKRFGCCSN 97
A+EA S++VPS G I++ +D S +K+ GCCSN
Sbjct: 182 AMEA--ASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.310 0.127 0.336
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,275,311
Number of Sequences: 2790947
Number of extensions: 4233913
Number of successful extensions: 12256
Number of sequences better than 10.0: 1735
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 10715
Number of HSP's gapped (non-prelim): 1736
length of query: 97
length of database: 848,049,833
effective HSP length: 73
effective length of query: 24
effective length of database: 644,310,702
effective search space: 15463456848
effective search space used: 15463456848
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC143337.8