
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142224.1 - phase: 0
(309 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9M330 Putative proteasome inhibitor [Arabidopsis thal... 317 3e-85
UniRef100_Q84ZC7 Proteasome inhibitor-like protein [Oryza sativa] 219 6e-56
UniRef100_Q5XVJ3 Hypothetical protein [Arabidopsis thaliana] 143 5e-33
UniRef100_Q5ZJL3 Hypothetical protein [Gallus gallus] 78 3e-13
UniRef100_Q5XIU5 Hypothetical protein [Rattus norvegicus] 74 4e-12
UniRef100_O23989 Expressed sequence tag [Hordeum vulgare] 73 8e-12
UniRef100_Q92530 Proteasome inhibitor PI31 subunit [Homo sapiens] 72 1e-11
UniRef100_Q8BHL8 Mus musculus adult male corpora quadrigemina cD... 72 2e-11
UniRef100_Q8C0G9 Mus musculus 13 days embryo male testis cDNA, R... 70 5e-11
UniRef100_Q5RDN3 Hypothetical protein DKFZp459M0226 [Pongo pygma... 70 5e-11
UniRef100_UPI000036C2A9 UPI000036C2A9 UniRef100 entry 69 1e-10
UniRef100_UPI00003C1CBE UPI00003C1CBE UniRef100 entry 69 2e-10
UniRef100_UPI000023DC8C UPI000023DC8C UniRef100 entry 59 2e-07
UniRef100_UPI0000272C10 UPI0000272C10 UniRef100 entry 58 3e-07
UniRef100_Q60X57 Hypothetical protein CBG18822 [Caenorhabditis b... 58 3e-07
UniRef100_UPI00001D16F5 UPI00001D16F5 UniRef100 entry 55 2e-06
UniRef100_UPI000002559F UPI000002559F UniRef100 entry 55 2e-06
UniRef100_Q91X47 Proteasome inhibitor subunit 1 [Mus musculus] 55 2e-06
UniRef100_UPI00002ACA6F UPI00002ACA6F UniRef100 entry 55 3e-06
UniRef100_UPI00003AECD6 UPI00003AECD6 UniRef100 entry 54 4e-06
>UniRef100_Q9M330 Putative proteasome inhibitor [Arabidopsis thaliana]
Length = 302
Score = 317 bits (811), Expect = 3e-85
Identities = 169/311 (54%), Positives = 207/311 (66%), Gaps = 17/311 (5%)
Query: 1 MATDKSVLAVIRAARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSNDE 60
MA ++V+A+IR ARP FRN +DK+AF +HSSF+ASGYILTATG A +D ALS+ S ++
Sbjct: 1 MANSQTVMAMIRLARPPFRNNHDKVAFAIHSSFVASGYILTATGRPAFADEALSSSSQND 60
Query: 61 VSVDHWNELNDEYAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVAD 120
V ++ WNE EYAFVYAN K+G KK+LVKCL M+ KLLV A+++G EP HLEI V D
Sbjct: 61 VGIEGWNEFEGEYAFVYAN-PKKGSKKILVKCLAMDDKLLVDAIADGGAEPAHLEIKVGD 119
Query: 121 YAGEDGGSNFSQQFKNLDKLVKKIDADILSKLDGTAHASSSTKSSKTSDSTRPETSEPVP 180
YA E ++S QFKNLDKLV + ++I+ KLDG +S S + + P + P
Sbjct: 120 YAEESNEGDYSAQFKNLDKLVTDLQSEIIDKLDGKPKPVASRAQSSSETNEEPRYYDDTP 179
Query: 181 GFGEPAGPNDYHPGFIVPPVPAGSG-SDLFPGPGAGMYPSRGDHDFG-GSMLVGPNDPRW 238
P GP + G +VPP+P G SDLFPGPGAGMYP RG FG GSMLVGP DPR+
Sbjct: 180 ---NPLGPQIHPSGVVVPPIPGNGGYSDLFPGPGAGMYPGRG--GFGDGSMLVGPTDPRF 234
Query: 239 FSGGTGGGIGGGPGFIG----GLPGAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFDAH 294
F G G PGF+G G+P PPGARFDP GPPGVPGFEP RF R P R H
Sbjct: 235 FPFGDG---SDRPGFMGPPHPGMP--PPGARFDPYGPPGVPGFEPGRFTRQPPRGPGGGH 289
Query: 295 PDLQHFRRDTD 305
PDL+HF +D
Sbjct: 290 PDLEHFPGGSD 300
>UniRef100_Q84ZC7 Proteasome inhibitor-like protein [Oryza sativa]
Length = 280
Score = 219 bits (559), Expect = 6e-56
Identities = 122/303 (40%), Positives = 167/303 (54%), Gaps = 32/303 (10%)
Query: 1 MATDKSVLAVIRAARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSNDE 60
M TD + +AV++AARP FR +D +AF +++FLA+GY L A GP AL+D S +E
Sbjct: 1 MVTDAAAMAVVKAARPAFRGAHDGVAFAANAAFLAAGYSLCAVGPAALTDPPPSG--EEE 58
Query: 61 VSVDHWNELNDEYAFVYANSEKEGLKKVLVKCLVMNGKLLVHALS--EGFKEPLHLEINV 118
V +D WN +++ YAF+Y E+ K+VLVKCLV+ L + L K P +++INV
Sbjct: 59 VGIDGWNSMDNCYAFLYIKEERGKKKRVLVKCLVIGDVLAIDVLDLESQNKGPYNIQINV 118
Query: 119 ADYAGEDGGSNFSQQFKNLDKLVKKIDADILSKLDGTAHASSSTKSSKTSDSTRPETSEP 178
D+ E+ N+ +KN L++ ++++ LSKLD ++ +TS S
Sbjct: 119 KDFFSEEQPKNYGNMYKNFAGLIETMNSNALSKLDEKDAGAAKNPEVETSSSIH------ 172
Query: 179 VPGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFGGSMLVGPNDPRW 238
+ PP+ D FPGPGAG YP G GGSM VGPNDPR+
Sbjct: 173 ---------------SLVYPPIAPLGHDDAFPGPGAGFYPHSGIGG-GGSMHVGPNDPRF 216
Query: 239 FSGGTGGGIGGGPGFIGGLPGAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFDAHPDLQ 298
F GGPG + PPG R+DPIGPP VPGFEP+RF R PR P HPDL+
Sbjct: 217 FPSNPFPVPFGGPGSV------PPGGRYDPIGPPDVPGFEPSRFVRRPRPPAGTTHPDLE 270
Query: 299 HFR 301
F+
Sbjct: 271 FFQ 273
>UniRef100_Q5XVJ3 Hypothetical protein [Arabidopsis thaliana]
Length = 175
Score = 143 bits (361), Expect = 5e-33
Identities = 80/168 (47%), Positives = 111/168 (65%), Gaps = 6/168 (3%)
Query: 1 MATDKSVLAVIRAARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSND- 59
MAT +V+ VIR+ P FRN+NDKIAFVVH+S SG+ILT+TG A + ALS+ +
Sbjct: 12 MATTHAVMGVIRSVMPAFRNKNDKIAFVVHASLAVSGFILTSTGRPAFAHDALSSSTTQC 71
Query: 60 EVSVDHWNELNDEYAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVA 119
V ++ WNE ++EYAFVY K +K+ LVKCL MN KLLV A++E KE HL+I V
Sbjct: 72 LVGIEGWNEFDEEYAFVY----KCPVKRYLVKCLAMNDKLLVDAIAEDGKEFGHLQIEVG 127
Query: 120 DYAGEDG-GSNFSQQFKNLDKLVKKIDADILSKLDGTAHASSSTKSSK 166
+Y E G ++ QFKN DKLV ++ ++IL KL+ + + S+ +K
Sbjct: 128 NYIDESGEEGDYDTQFKNFDKLVTELKSEILCKLNTVSTTTKSSSETK 175
>UniRef100_Q5ZJL3 Hypothetical protein [Gallus gallus]
Length = 271
Score = 78.2 bits (191), Expect = 3e-13
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 40/289 (13%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSNDEVSVDHWNELNDE 72
+AR D + +H + GY G Q + S E+ W +
Sbjct: 10 SARAGISCPQDALVCGIHWELIQHGYRCLGAGEQPGPEERKS-----ELLPAGWEANKEV 64
Query: 73 YAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNFSQ 132
Y Y +++ +++L+K +V+ ++++ + ++ + + VADY + ++F +
Sbjct: 65 YTLRYKSTDDA--RELLLKAIVVEDSMILNVMDRASQKVTDVTLAVADYINPEHLNDFHK 122
Query: 133 QFKNLDKLVKKIDADILSKLDGTAHASSSTKSSKTSDSTRPETSEPVPGFGEPAGPNDYH 192
+KN+++L +I + I++ L + K+ K S + + +P P DY+
Sbjct: 123 VYKNMEELRTRIVSGIIAPL-----GVPTEKAKKESQAEKK----------DPDSPLDYN 167
Query: 193 PGFIVPPVPAGSGSDLFPGP-------GAGMYPSRGDHDFGGSMLVGPNDPRWFSGGTGG 245
P I P PAG+ + +P P G + P G G M+V P SG
Sbjct: 168 PRGIPPRHPAGARAPSWPSPLNPFAVGGQDLDPLGGR---SGGMIVDP----LRSGFPQP 220
Query: 246 GIGGGPGFIGGLP--GAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFD 292
GI G GLP PPGARFDP GP G P+ P PG+D
Sbjct: 221 GIDPSTGLPSGLPPGAVPPGARFDPFGPLGAGRAGPDPDHLPP--PGYD 267
>UniRef100_Q5XIU5 Hypothetical protein [Rattus norvegicus]
Length = 271
Score = 74.3 bits (181), Expect = 4e-12
Identities = 75/285 (26%), Positives = 116/285 (40%), Gaps = 32/285 (11%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSNDEVSVDHWNELNDE 72
+A P D + +H + +GY TG D N E+ WN +
Sbjct: 10 SAAPAMTCPQDALVCFLHWEVVTNGYYGLGTG-----DQPDPNDKKSELLPAEWNSNKEL 64
Query: 73 YAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNFSQ 132
YA Y + K+G +K+L+K + + ++++ L G ++ L +N+ DY + S+F +
Sbjct: 65 YALRYES--KDGARKLLLKAVSVENGMIINVLEHGTQQVADLTLNLDDYIDAEDLSDFHR 122
Query: 133 QFKNLDKLVKKIDADILSKLDGTAHASSSTKSSKTSDSTRPETSEPVPGFGEPAGPNDYH 192
+KN ++L +I + I++ + + S P T+ V +P + +H
Sbjct: 123 TYKNSEELRSRIRSGIITPIH---EQWEKVRLSSPPREFPPATAREV----DPLRISSHH 175
Query: 193 PGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFG---GSMLVGPNDPRWFSGGTGGGIGG 249
P P S G G + P FG G M+V P SG I
Sbjct: 176 PHTSRQPTWRDPLSPFAVG-GEDLDP------FGCQRGGMIVDP----LRSGFPRALIDP 224
Query: 250 GPGFIGGLP--GAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFD 292
G LP PPGARFDP GP G PN P PG+D
Sbjct: 225 SSGLPNRLPPGAVPPGARFDPFGPIGTSPSGPNPDHLPP--PGYD 267
>UniRef100_O23989 Expressed sequence tag [Hordeum vulgare]
Length = 64
Score = 73.2 bits (178), Expect = 8e-12
Identities = 31/55 (56%), Positives = 36/55 (65%)
Query: 251 PGFIGGLPGAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFDAHPDLQHFRRDTD 305
P GG PPG R+DPIGPP VPGFEP+RF R R PG HPDL+ F++ D
Sbjct: 9 PAPFGGPGSVPPGGRYDPIGPPDVPGFEPSRFVRRSRHPGGSTHPDLEFFQQGPD 63
>UniRef100_Q92530 Proteasome inhibitor PI31 subunit [Homo sapiens]
Length = 271
Score = 72.4 bits (176), Expect = 1e-11
Identities = 78/296 (26%), Positives = 117/296 (39%), Gaps = 54/296 (18%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSNDEVSVDHWNELNDE 72
+A P + D + +H + GY G D N E+ WN D
Sbjct: 10 SAAPAITCRQDALVCFLHWEVVTHGYCGLGVG-----DQPGPNDKKSELLPAGWNNNKDL 64
Query: 73 YAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNFSQ 132
Y Y K+G +K+LVK + + ++++ L G ++ L +N+ DY + +F +
Sbjct: 65 YVLRY--EYKDGSRKLLVKAITVESSMILNVLEYGSQQVADLTLNLDDYIDAEHLGDFHR 122
Query: 133 QFKNLDKLVKKIDADILSKLD--------GTAHASSSTKSSKTSDSTR-----PETSEPV 179
+KN ++L +I + I++ + + H +++ D R P TS
Sbjct: 123 TYKNSEELRSRIVSGIITPIHEQWEKANVSSPHREFPPATAREVDPLRIPPHHPHTSRQ- 181
Query: 180 PGFGEPAGPNDYHPGFIVPPVPAGSGSDLFP-GPGAGMYPSRGDHDFGGSMLVGPNDPRW 238
P + +P GP F+V G DL P GP G M+V P
Sbjct: 182 PPWCDPLGP------FVV------GGEDLDPFGPRR------------GGMIVDP----L 213
Query: 239 FSGGTGGGIGGGPGFIGGLP--GAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFD 292
SG I G LP PPGARFDP GP G PN P PG+D
Sbjct: 214 RSGFPRALIDPSSGLPNRLPPGAVPPGARFDPFGPIGTSPPGPNPDHLPP--PGYD 267
>UniRef100_Q8BHL8 Mus musculus adult male corpora quadrigemina cDNA, RIKEN
full-length enriched library, clone:B230318D18
product:similar to PROTEASOME INHIBITOR PI31 SUBUNIT
[Mus musculus]
Length = 271
Score = 72.0 bits (175), Expect = 2e-11
Identities = 80/300 (26%), Positives = 122/300 (40%), Gaps = 62/300 (20%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSN--DEVSVDHWNELN 70
+A P+ D + +H + +GY TG Q PS+ E+ WN
Sbjct: 10 SAAPSMSCPQDALVCFLHWEVVTNGYYALGTGDQP-------GPSDKKSELLPAKWNSNK 62
Query: 71 DEYAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNF 130
+ YA Y + K+G +K+L+K + + ++++ L G ++ L +N+ DY + S+F
Sbjct: 63 ELYALRYES--KDGARKLLLKAVSVENGMIINVLELGTQQVADLTLNLDDYIDAEDLSDF 120
Query: 131 SQQFKNLDKLVKKIDADILSKLD---GTAHASSSTKSSKTS----------DSTRPETSE 177
+ +KN ++L +I + I++ + A A+S + + S RP TS
Sbjct: 121 HRTYKNSEELRSQIRSGIITPIHEQWEKARANSPPREFPPATAREVDPLQISSHRPHTSR 180
Query: 178 PVPGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFG---GSMLVGPN 234
P + +P P A G DL P FG G M+V P
Sbjct: 181 Q-PAWRDPLSPF------------AVGGDDLDP--------------FGCQRGGMIVDP- 212
Query: 235 DPRWFSGGTGGGIGGGPGFIGGLP--GAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFD 292
SG I G LP PPGARFDP GP G PN P PG+D
Sbjct: 213 ---LRSGFPRVLIDPSSGLPNRLPPGAVPPGARFDPFGPIGTSPSGPNPDHLPP--PGYD 267
>UniRef100_Q8C0G9 Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
enriched library, clone:6030413I21 product:similar to
PROTEASOME INHIBITOR PI31 SUBUNIT [Mus musculus]
Length = 271
Score = 70.5 bits (171), Expect = 5e-11
Identities = 80/300 (26%), Positives = 121/300 (39%), Gaps = 62/300 (20%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSN--DEVSVDHWNELN 70
+A P+ D + +H + +GY TG Q PS+ E+ WN
Sbjct: 10 SAAPSMSCPQDALVCFLHWEVVTNGYYALGTGDQP-------GPSDKKSELLPAKWNSNK 62
Query: 71 DEYAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNF 130
+ YA Y + K+G +K L+K + + ++++ L G ++ L +N+ DY + S+F
Sbjct: 63 ELYALRYES--KDGARKHLLKAVSVENGMIINVLELGTQQVADLTLNLDDYIDAEDLSDF 120
Query: 131 SQQFKNLDKLVKKIDADILSKLD---GTAHASSSTKSSKTS----------DSTRPETSE 177
+ +KN ++L +I + I++ + A A+S + + S RP TS
Sbjct: 121 HRTYKNSEELRSQIRSGIITPIHEQWEKARANSPPREFPPATAREVDPLQISSHRPHTSR 180
Query: 178 PVPGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFG---GSMLVGPN 234
P + +P P A G DL P FG G M+V P
Sbjct: 181 Q-PAWRDPLSPF------------AVGGDDLDP--------------FGCQRGGMIVDP- 212
Query: 235 DPRWFSGGTGGGIGGGPGFIGGLP--GAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFD 292
SG I G LP PPGARFDP GP G PN P PG+D
Sbjct: 213 ---LRSGFPRVLIDPSSGLPNRLPPGAVPPGARFDPFGPIGTSPSGPNPDHLPP--PGYD 267
>UniRef100_Q5RDN3 Hypothetical protein DKFZp459M0226 [Pongo pygmaeus]
Length = 271
Score = 70.5 bits (171), Expect = 5e-11
Identities = 77/298 (25%), Positives = 114/298 (37%), Gaps = 58/298 (19%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSNDEVSVDHWNELNDE 72
+A P D + +H + GY G D N E+ WN D
Sbjct: 10 SAAPAITCTQDALVCFLHWEVVTHGYYALGVG-----DQPGPNDKKSELLPAGWNNNKDL 64
Query: 73 YAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNFSQ 132
Y Y K+G +K+LVK + + ++++ L G ++ L +N+ DY + +F +
Sbjct: 65 YVLRY--EYKDGSRKLLVKAITVESSMILNVLEYGSQQVADLTLNLDDYIDAEHLGDFHR 122
Query: 133 QFKNLDKLVKKIDADILSKLD--------GTAHASSSTKSSKTSDSTR-----PETSEPV 179
+KN ++L +I + I++ + + H +++ D R P TS
Sbjct: 123 TYKNSEELRSRIVSGIITPIHEQWEKANVSSPHREFPPATAREVDPLRIPPHHPHTSRQ- 181
Query: 180 PGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFG---GSMLVGPNDP 236
P + +P GP A G DL P FG G M+V P
Sbjct: 182 PPWCDPLGPF------------AVGGEDLDP--------------FGHRRGGMIVDP--- 212
Query: 237 RWFSGGTGGGIGGGPGFIGGLP--GAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFD 292
SG I G LP PPGARFDP GP G PN P PG+D
Sbjct: 213 -LRSGFPRALIDPSSGLPNRLPPGAVPPGARFDPFGPIGTSPPGPNPDHLPP--PGYD 267
>UniRef100_UPI000036C2A9 UPI000036C2A9 UniRef100 entry
Length = 271
Score = 69.3 bits (168), Expect = 1e-10
Identities = 77/298 (25%), Positives = 114/298 (37%), Gaps = 58/298 (19%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSNDEVSVDHWNELNDE 72
+A P D + +H + GY G D N E+ WN D
Sbjct: 10 SAAPAITCTQDALVCFLHWEVVTHGYYGLGVG-----DQPGPNDKKSELLPAGWNNNKDL 64
Query: 73 YAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNFSQ 132
Y Y K+G +K+LVK + + ++++ L G ++ L +N+ DY + +F +
Sbjct: 65 YVLRY--EYKDGSRKLLVKAITVESSMILNVLEYGSQQVADLTLNLDDYIDAEHLGDFHR 122
Query: 133 QFKNLDKLVKKIDADILSKLD--------GTAHASSSTKSSKTSDSTR-----PETSEPV 179
+KN ++L +I + I++ + + H +++ D R P TS
Sbjct: 123 TYKNSEELRSRIVSGIITPIHEQWEKANVSSPHREFPPATAREVDPLRIPPHHPHTSRQ- 181
Query: 180 PGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFG---GSMLVGPNDP 236
P + +P GP A G DL P FG G M+V P
Sbjct: 182 PPWCDPLGPF------------AVGGEDLDP--------------FGHRRGGMIVDP--- 212
Query: 237 RWFSGGTGGGIGGGPGFIGGLP--GAPPGARFDPIGPPGVPGFEPNRFARNPRRPGFD 292
SG I G LP PPGARFDP GP G PN P PG+D
Sbjct: 213 -LRSGFPRALIDPSSGLPNRLPPGAVPPGARFDPFGPIGTSPPGPNPDHLPP--PGYD 267
>UniRef100_UPI00003C1CBE UPI00003C1CBE UniRef100 entry
Length = 388
Score = 68.6 bits (166), Expect = 2e-10
Identities = 87/335 (25%), Positives = 131/335 (38%), Gaps = 75/335 (22%)
Query: 16 PTFRNQNDKIAFVVHSSFLASGYILTATGPQ-ALSDTALSNPSNDEVSV--DHWNELN-D 71
P RN D +A ++H+ + LT L+ ++ +P++ + WN D
Sbjct: 26 PLLRNPADALAAIIHTIMTRLDFRLTGLSEDDRLAPSSSESPTSSSTNKLPPEWNAKGPD 85
Query: 72 EYAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYA--------- 122
Y+F Y + + LVK + + K ++H ++ + +E+ ++DY
Sbjct: 86 HYSFRYKHHQSS--LDYLVKIVKLGNKAVIHGVALQGTKTSTMEVVLSDYLSSAFWPYPR 143
Query: 123 -GED-----GGSNFSQQFKNLDKLVKKIDADILSKL------DGTAHASSSTKSS----- 165
G+D G S + K+L K +L +L DG +SS SS
Sbjct: 144 EGKDEEMLVNGYIGSSRLKDLTSAFK---IQVLQQLVPGLRKDGYVEENSSNASSGGGGG 200
Query: 166 -----KTSDSTRPE--TSEPVPGFG----EPAGPNDYHPGFIVPPV-------PAGSGSD 207
++S +RP T++P P +P+ P+ Y P F P + P G
Sbjct: 201 ERSSTQSSGPSRPTAGTTQPRPPLAADEDDPSLPSGYQPPFRNPLIIGDRDLDPLGGSPL 260
Query: 208 LFP-----GPGAGMYPSR--GDHDFGGSMLVGPNDPRWFSGGTGGGIGGGPGFIGGLPGA 260
P G GAG P D GG M VGPN P + + G G G +
Sbjct: 261 ALPPRFGGGGGAGFAPPPVFPGGDTGGGMFVGPNHPMFRNRYPPQGTGLPQGAV------ 314
Query: 261 PPGARFDPIGP---------PGVPGFEPNRFARNP 286
PPGARFDPI P P V G P F P
Sbjct: 315 PPGARFDPIYPGGAGPEASHPDVGGARPQNFGGEP 349
>UniRef100_UPI000023DC8C UPI000023DC8C UniRef100 entry
Length = 393
Score = 58.5 bits (140), Expect = 2e-07
Identities = 84/336 (25%), Positives = 125/336 (37%), Gaps = 87/336 (25%)
Query: 25 IAFVVHSSFLASGYILTATGPQA----LSDTALSNPSNDEVSV-----------DHWNEL 69
IA ++HS A G+ L L+ T++ P++ + HWN
Sbjct: 37 IALLIHSYLSALGFKLQGFDEDKKLGQLTQTSMYYPAHTRRPIAECESLAPRLPSHWNSG 96
Query: 70 NDEYAFVYANSEKEGL---------KKVLVKCLVM---NGKLLVHALSEGF---KEPLHL 114
Y+FVY++ + KKV V+ L + N + +SE K P+ +
Sbjct: 97 FKSYSFVYSHKQSAMTFSIRVDRMGKKVEVRGLAVGDDNIRRFERTISEVVDTKKLPIRI 156
Query: 115 EINVAD-------------YAGEDGGSNFSQQFKN--LDKLVKKIDAD-ILSKLDGTAHA 158
IN + E ++ K + KL+ K+ ++ + + +A
Sbjct: 157 TINDNQEDRSDLVEKLRGVFTSEQAIADILHDLKTNIIQKLIPKLQSEGYVETAEAEDNA 216
Query: 159 SSSTKSSKTSDSTRPETSEPVPGFGEPAGPNDYHPGFIVP-PVPAGSGSDLFPGPG---- 213
S ++ + + RP +PVP P P + P P P P G FP PG
Sbjct: 217 RSERRAQEAQNPNRPFRGDPVPNPNMPPPPANPLPEMARPRPHPVGD----FPPPGFEDE 272
Query: 214 ---------AGMYPSRGDHDFGGSML----VGPNDPRW--FSGG----TGGGIG------ 248
P R ++ G L +GP+DP F GG GG G
Sbjct: 273 YEMNRPPRGGFQMPGRSPYNIGHDDLNPPGLGPHDPLRGSFVGGGLPRPGGYSGMHPTFD 332
Query: 249 -------GGPGFIGGLPGAPPGARFDPIGPPGVPGF 277
GG G G P APPGAR+DP GP G P F
Sbjct: 333 DPLFRGQGGDGQGGYDPQAPPGARWDPTGPGGNPRF 368
>UniRef100_UPI0000272C10 UPI0000272C10 UniRef100 entry
Length = 105
Score = 58.2 bits (139), Expect = 3e-07
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 12/87 (13%)
Query: 1 MATDKSVLAVIRAARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSNDE 60
MAT +VLAV+RAAR R D + F VH +FLA GY+L A G D + ++E
Sbjct: 1 MATPAAVLAVMRAARVVCRTPRDAVMFAVHCTFLAEGYVLLAAGDNV--DPMMFQEKDEE 58
Query: 61 VSVD----------HWNELNDEYAFVY 77
WN+++DEYAF Y
Sbjct: 59 PDDGLPKRKPDPHVGWNDMDDEYAFKY 85
>UniRef100_Q60X57 Hypothetical protein CBG18822 [Caenorhabditis briggsae]
Length = 485
Score = 58.2 bits (139), Expect = 3e-07
Identities = 43/122 (35%), Positives = 48/122 (39%), Gaps = 14/122 (11%)
Query: 178 PVPGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAG---MYPSRGDHDFGGSMLVGPN 234
P FG P GP G PP P G+ F P +G M PS+G GP
Sbjct: 371 PQGQFGAPQGPPQ---GNFAPPPPGAPGATPFAPPPSGFGGMPPSQGPPQGPPGQFGGPG 427
Query: 235 DPRWFSGGTGGGIGGGPGFIGGLPGAPPGARFDPIGPP-GVPGFEPNRFARNPRRPGFDA 293
P G P GG P PP F P+G P G PG P FAR P PG+
Sbjct: 428 GPP-----PPGAFAPPPSQFGGPPQGPPQGAFPPVGAPGGAPGGNP--FARGPAGPGYRQ 480
Query: 294 HP 295
P
Sbjct: 481 SP 482
Score = 39.7 bits (91), Expect = 0.10
Identities = 42/151 (27%), Positives = 51/151 (32%), Gaps = 14/151 (9%)
Query: 157 HASSSTKSSKTSDSTRPETSEPVPGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGM 216
H+ SS S+ + P+ G P+GP + G+ P G GP G
Sbjct: 268 HSHSSVSSTPQNFGAPPQGPPGQFGGPPPSGPPSEYGGYAPQGPPQGQFGAPPQGPPQGQ 327
Query: 217 YPSRGDHDFG---GSMLVGPNDPRWFSGGTGGGIGGGPGFIG------GLPGAPPGARFD 267
+ + G G P P G PG G G P PP F
Sbjct: 328 FGAPSPAPQGPPQGQFGAPPQGPPQGQFGASSPAPQAPGQFGPPQGQFGAPQGPPQGNFA 387
Query: 268 PIGPPGVPGFEPNRFARNPRRPGFDAHPDLQ 298
P PPG PG P FA P GF P Q
Sbjct: 388 P-PPPGAPGATP--FA--PPPSGFGGMPPSQ 413
>UniRef100_UPI00001D16F5 UPI00001D16F5 UniRef100 entry
Length = 1201
Score = 55.5 bits (132), Expect = 2e-06
Identities = 52/140 (37%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 179 VPGFGEPA--GPNDYHPGFIVPPVPAGSGSDLFP--GPGAGMYPS-RGDHDFGGSMLVGP 233
+PG G P GP + PG PP P G+ + P PG +P +G+ FG L GP
Sbjct: 657 IPGIGPPGPPGPKGF-PGIPGPPGPPGAPGRMGPEGPPGLPGFPGPKGEPGFG---LPGP 712
Query: 234 NDPRWFSG--GTGG-----GIGGGPGFIG-----GLPG----APPGARFDPIGPPGVPGF 277
P F G GT G G+ G PG G GLPG A P + PIGPPG+PG
Sbjct: 713 PGPPGFPGFKGTPGPKGDRGLPGPPGPPGHTGLDGLPGPKGDAGPNGQPGPIGPPGLPGI 772
Query: 278 EPNRFARNPRRPGFDAHPDL 297
P PG P L
Sbjct: 773 GLQGPPGPPGTPGPIGQPGL 792
Score = 43.1 bits (100), Expect = 0.009
Identities = 46/143 (32%), Positives = 56/143 (38%), Gaps = 30/143 (20%)
Query: 174 ETSEP-VPGF-GEPAGPNDY-------HPGFIVPPVPAGSGSDLFPGPGAGM-YPSRGDH 223
ET +P +PG G+P P + G PP P G + P PG G+ ++G+
Sbjct: 243 ETGQPGIPGLPGDPGYPGEPGRHGEKGQKGDTGPPGPPGF---VIPTPGTGVTIGAKGN- 298
Query: 224 DFGGSMLVGPNDPRWFSGGTGGGIGGGPGFIGGLPGAPPGARFDPIGPPGVPGFEPNRFA 283
G L G R F G I G PGF PG P A P GPPG PG +
Sbjct: 299 -IGQPGLPGEKGERGFPG-----IQGPPGF----PGPPGTAVMGPPGPPGYPGERGQKGD 348
Query: 284 RN------PRRPGFDAHPDLQHF 300
P PG D P F
Sbjct: 349 EGPPGICIPGSPGLDGQPGAPGF 371
Score = 39.7 bits (91), Expect = 0.10
Identities = 46/156 (29%), Positives = 54/156 (34%), Gaps = 31/156 (19%)
Query: 153 DGTAHASSSTKSSKTSDSTRPETSEPVPGF-GEPAGPNDYHPGFIVPPVPAGS----GSD 207
D H SS S + PG G P P PG PP P G G D
Sbjct: 3 DKACHGCSSGSKCDCSGIKGEKGERGFPGLEGHPGLPG--FPGPEGPPGPRGQKGMPGHD 60
Query: 208 LFPGPGA--GMYPSRGDHDFGGS-------------------MLVGPNDPRWFSGGTGGG 246
PGP G ++G+ F GS L GP + + G G
Sbjct: 61 GAPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGEPGSIIMSSLPGPKGNQGYPGPPGIQ 120
Query: 247 IGGGPGFIGGLPGAPPG--ARFDPIGPPGVPGFEPN 280
GP + G P PPG P GPPG PG + N
Sbjct: 121 GPPGPKGVSG-PSGPPGPPGLMGPPGPPGPPGPKGN 155
Score = 38.5 bits (88), Expect = 0.23
Identities = 39/113 (34%), Positives = 43/113 (37%), Gaps = 19/113 (16%)
Query: 173 PETSEPVPGFGEPAGPNDYHPGFIVPPVPAGS-GSDLFPGPGAGMYPSRGDHDFGGSMLV 231
P PV G G P P PP G G D PGP AG G GG+ +
Sbjct: 1099 PGEPGPVGGGGRPGPPG--------PPGEKGKPGQDGIPGP-AGQKGEPGQKGDGGAPGL 1149
Query: 232 GPNDPRWFSGGTGGGIGGGPGFIG--GLPGAP------PGARFDPIGPPGVPG 276
P +P G G PG G G PG+P P P GPPG PG
Sbjct: 1150 -PGNPGLPGSKGEPGFQGFPGMPGPPGPPGSPGPSLEGPKGNPGPQGPPGRPG 1201
Score = 38.1 bits (87), Expect = 0.30
Identities = 43/125 (34%), Positives = 53/125 (42%), Gaps = 25/125 (20%)
Query: 179 VPGFGEPAGPNDYHPGFIVPPVPAGSGS--DLFPGPGA-GMYPSRGDHDFGGSMLVGPND 235
+PG P GP + P P P G + PG G+ +GD G + P
Sbjct: 567 LPGNMGPTGPVGFGP-----PGPVGEKGIQGVAGNPGQPGLPGPKGDP---GQTISQPGK 618
Query: 236 PRWFSGGTGG----GIGGGPGFIG--GLPGAPPGARFDP----IGPPGVPGFEPNRFARN 285
P G G G+ G PG G GLPG P G++ +P IGPPG PG P F
Sbjct: 619 PG-LPGNPGRDGEVGLPGDPGLPGQPGLPGIP-GSKGEPGIPGIGPPGPPG--PKGFPGI 674
Query: 286 PRRPG 290
P PG
Sbjct: 675 PGPPG 679
Score = 37.7 bits (86), Expect = 0.39
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 32/148 (21%)
Query: 171 TRPETSEP-VPGFGEPAGPNDYH--PGFIVPPVPAGS-GSDLFPGP-GAGMYPSRGDHDF 225
++ E +P +PG +GP Y PG P +G GS PGP G P
Sbjct: 916 SKGEKGDPGLPGIPGLSGPKGYQGLPGDPGQPGLSGQPGSPGLPGPKGTPGLP------- 968
Query: 226 GGSMLVGPNDPRWFSGGTG----GGIGGGPGFIGG--LPGAP-----PGARFDP----IG 270
G L GP P+ G G G+ G PG GG PG+P G++ +P IG
Sbjct: 969 GPPGLTGPPGPKGNIGDMGFPGPQGVDGPPGPPGGPGQPGSPGLPGQKGSKGEPGVSGIG 1028
Query: 271 PPGVPGFEPNRFARNPRRPGFDAHPDLQ 298
PG+PG + P PG+ +P ++
Sbjct: 1029 LPGLPGPK-----GEPGLPGYPGNPGIK 1051
Score = 35.8 bits (81), Expect = 1.5
Identities = 47/164 (28%), Positives = 58/164 (34%), Gaps = 52/164 (31%)
Query: 179 VPGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPG-------PGAGMYPSR----GDHDFGG 227
+PG GP PG VP +P GS PG PG+ P R G G
Sbjct: 795 IPGEKGDPGP----PGLDVPGLPGERGSPGLPGAPGLIGPPGSPGIPGRAGVPGFPGVKG 850
Query: 228 SMLV----GPNDPRWFSGGTGG-------GIGGGPGFIG-----------GLPGAP---- 261
M + GP P G +G G+ G PG G GLPG P
Sbjct: 851 EMGMMGPPGPPGPLGTPGRSGAPGLKGDDGMQGQPGLPGPVGEKGGKGEPGLPGPPGPMR 910
Query: 262 ------PGARFDPIGPPGVPGFEPNR----FARNPRRPGFDAHP 295
G + DP G PG+PG + +P +PG P
Sbjct: 911 PDFLGSKGEKGDP-GLPGIPGLSGPKGYQGLPGDPGQPGLSGQP 953
Score = 33.1 bits (74), Expect = 9.7
Identities = 41/126 (32%), Positives = 46/126 (35%), Gaps = 30/126 (23%)
Query: 179 VPGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGA--GMYPSRGDHDFGGSMLVGPNDP 236
+PG AGPN PG I PP G G PGP G G H G P P
Sbjct: 748 LPGPKGDAGPNG-QPGPIGPPGLPGIGLQGPPGPPGTPGPIGQPGLHGIPGEK-GDPGPP 805
Query: 237 RWFSGGTGG-----GIGGGPGFIG--GLPGAP--------PGARFD-----------PIG 270
G G G+ G PG IG G PG P PG + + P+G
Sbjct: 806 GLDVPGLPGERGSPGLPGAPGLIGPPGSPGIPGRAGVPGFPGVKGEMGMMGPPGPPGPLG 865
Query: 271 PPGVPG 276
PG G
Sbjct: 866 TPGRSG 871
>UniRef100_UPI000002559F UPI000002559F UniRef100 entry
Length = 176
Score = 55.1 bits (131), Expect = 2e-06
Identities = 35/142 (24%), Positives = 70/142 (48%), Gaps = 11/142 (7%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSN--DEVSVDHWNELN 70
+A P+ D + +H + +GY TG Q PS+ E+ WN
Sbjct: 10 SAAPSMSCPQDALVCFLHWEVVTNGYYALGTGDQP-------GPSDKKSELLPAKWNSNK 62
Query: 71 DEYAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNF 130
+ YA Y + K+G +K+L+K + + ++++ L G ++ L +N+ DY + S+F
Sbjct: 63 ELYALRYES--KDGARKLLLKAVSVENGMIINVLELGTQQVADLTLNLDDYIDAEDLSDF 120
Query: 131 SQQFKNLDKLVKKIDADILSKL 152
+ +KN ++L +I + I++ +
Sbjct: 121 HRTYKNSEELRSQIRSGIITPI 142
>UniRef100_Q91X47 Proteasome inhibitor subunit 1 [Mus musculus]
Length = 177
Score = 55.1 bits (131), Expect = 2e-06
Identities = 35/142 (24%), Positives = 70/142 (48%), Gaps = 11/142 (7%)
Query: 13 AARPTFRNQNDKIAFVVHSSFLASGYILTATGPQALSDTALSNPSN--DEVSVDHWNELN 70
+A P+ D + +H + +GY TG Q PS+ E+ WN
Sbjct: 10 SAAPSMSCPQDALVCFLHWEVVTNGYYALGTGDQP-------GPSDKKSELLPAKWNSNK 62
Query: 71 DEYAFVYANSEKEGLKKVLVKCLVMNGKLLVHALSEGFKEPLHLEINVADYAGEDGGSNF 130
+ YA Y + K+G +K+L+K + + ++++ L G ++ L +N+ DY + S+F
Sbjct: 63 ELYALRYES--KDGARKLLLKAVSVENGMIINVLELGTQQVADLTLNLDDYIDAEDLSDF 120
Query: 131 SQQFKNLDKLVKKIDADILSKL 152
+ +KN ++L +I + I++ +
Sbjct: 121 HRTYKNSEELRSQIRSGIITPI 142
>UniRef100_UPI00002ACA6F UPI00002ACA6F UniRef100 entry
Length = 276
Score = 54.7 bits (130), Expect = 3e-06
Identities = 44/108 (40%), Positives = 45/108 (40%), Gaps = 10/108 (9%)
Query: 185 PAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFGGSMLVGPNDPRWFSGGTG 244
P GP D+ PG P P G F GPG GD GG GP P F G
Sbjct: 1 PGGPGDFGPGDFGPGGPGDFGPGDF-GPG-----GPGDFGPGGLGDFGPGGPGDFGPGGL 54
Query: 245 GGIG-GGPGFIG-GLPGAPPGARFDPIGPPGVPGFEPNRFARNPRRPG 290
GG G GGPG G G PG P G GP G F P A P PG
Sbjct: 55 GGFGPGGPGDFGPGGPGGPGG--LGGFGPGGPGDFGPTGIAGGPLIPG 100
Score = 51.6 bits (122), Expect = 3e-05
Identities = 51/135 (37%), Positives = 56/135 (40%), Gaps = 32/135 (23%)
Query: 181 GFGEPAGPNDYHPGFIV--PPVPAGSGSDLFPGPGAGMYPSRGDHDFGGSMLVGPNDPRW 238
GFG P GP D+ P I P +P G G D PG G G + G DFG GP P
Sbjct: 78 GFG-PGGPGDFGPTGIAGGPLIPGGPG-DFGPG-GPGDFGPGGPGDFGPG---GPGGPGD 131
Query: 239 FSGGTGGGIG-------GGPGFIG------GLPGA--PPGARFDPIGP--------PGVP 275
F G GG G GGPG G LPG PPG+ F P G PG+
Sbjct: 132 FGPGGPGGPGDFGPGGPGGPGDFGPGGSSSSLPGTFLPPGS-FQPPGTIQQPGAYNPGLQ 190
Query: 276 GFEPNRFARNPRRPG 290
GF P PG
Sbjct: 191 GFAPIMVVTTAPVPG 205
Score = 51.2 bits (121), Expect = 3e-05
Identities = 41/104 (39%), Positives = 44/104 (41%), Gaps = 9/104 (8%)
Query: 180 PGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFGGSML--VGPNDPR 237
PG P GP D+ PG P G D PG G G + G DFG L GP P
Sbjct: 9 PGDFGPGGPGDFGPGDFGP----GGPGDFGPG-GLGDFGPGGPGDFGPGGLGGFGPGGPG 63
Query: 238 WFSGGTGGGIGGGPGFIGGLPG--APPGARFDPIGPPGVPGFEP 279
F G GG GG GF G PG P G P+ P G F P
Sbjct: 64 DFGPGGPGGPGGLGGFGPGGPGDFGPTGIAGGPLIPGGPGDFGP 107
>UniRef100_UPI00003AECD6 UPI00003AECD6 UniRef100 entry
Length = 759
Score = 54.3 bits (129), Expect = 4e-06
Identities = 48/117 (41%), Positives = 53/117 (45%), Gaps = 22/117 (18%)
Query: 172 RPETSEPVPGFGEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFGGSMLV 231
R E +P P GE P D PGF P PAG + P GM GD G+ +
Sbjct: 34 RGENGQPGPA-GEKGPPGD--PGF---PGPAGDMGSVGPSGPVGMLGRPGDD---GTRIS 84
Query: 232 GPNDPRWFSG-----GTGGGIGGGPGFIG--GLPGAP-----PGARFDPIGPPGVPG 276
G P+ F G GTG I G PGF G GLPG P PG D G PGVPG
Sbjct: 85 GAPGPQGFQGDPGLPGTGEAIPGRPGFPGPPGLPGQPGRQGLPGLPSDK-GFPGVPG 140
Score = 39.7 bits (91), Expect = 0.10
Identities = 48/137 (35%), Positives = 58/137 (42%), Gaps = 29/137 (21%)
Query: 179 VPGFGEPAGPNDYHPGFIVPPVPAGSGSDL-FPGPGA-----GMYPSRGDHDFGGSMLVG 232
+PG G P GP PG P G ++ PGP G GD GS + G
Sbjct: 150 LPGLGFP-GP----PGVRGTPGDFGDDGNIGLPGPKGQKGFRGTAGDPGDEGERGSTIDG 204
Query: 233 PND---PRWFSGG---TGGGIGGGPGFIG--GLPGAPPGARFDPIGPPGVPGFEPNRFAR 284
N P G +G G PGF G GLPG PPGA+ G PG+PG +
Sbjct: 205 KNGAPGPPGIDGQKGVSGDTTYGPPGFPGNRGLPG-PPGAQ-GARGDPGIPGLQ-----G 257
Query: 285 NPRRPGFDAHPDLQHFR 301
+P PGF P + FR
Sbjct: 258 HPGTPGF---PGAKGFR 271
Score = 33.1 bits (74), Expect = 9.7
Identities = 46/131 (35%), Positives = 49/131 (37%), Gaps = 24/131 (18%)
Query: 180 PGF----GEPAGPNDYHPGFIVPPVPAGSGSDLFPGPGAGMYPSRGDHDFGGSM----LV 231
PGF G P P D H + P G FPGP S+G F G
Sbjct: 379 PGFPGNNGAPGLPGD-HGDIGLMGFPGSRG---FPGPKG----SKGVTGFKGLPGQPGNP 430
Query: 232 GPNDPRWFSGGTGG--GIGGGPGFIG--GLPGAP--PG--ARFDPIGPPGVPGFEPNRFA 283
GP F G G GI G PG G GL GA PG R P G PG PG +
Sbjct: 431 GPPGETVFVRGDPGDTGIRGAPGIPGHRGLQGARGLPGNQGREGPKGEPGEPGKTDDSCP 490
Query: 284 RNPRRPGFDAH 294
P PG H
Sbjct: 491 AIPGPPGEAGH 501
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.314 0.138 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 643,886,695
Number of Sequences: 2790947
Number of extensions: 35874717
Number of successful extensions: 158697
Number of sequences better than 10.0: 3500
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 3439
Number of HSP's that attempted gapping in prelim test: 123318
Number of HSP's gapped (non-prelim): 20105
length of query: 309
length of database: 848,049,833
effective HSP length: 127
effective length of query: 182
effective length of database: 493,599,564
effective search space: 89835120648
effective search space used: 89835120648
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)
Medicago: description of AC142224.1