BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142222.6 - phase: 0
(123 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9M9A2 F27J15.21 [Arabidopsis thaliana] 85 3e-16
UniRef100_Q9LII3 Gb|AAF43227.1 [Arabidopsis thaliana] 83 1e-15
UniRef100_Q6ZIR5 Hypothetical protein OJ1038_A06.25 [Oryza sativa] 64 6e-10
UniRef100_Q656A2 Hypothetical protein P0596H06.16 [Oryza sativa] 57 7e-08
UniRef100_Q5VPY8 Hypothetical protein B1096D03.33 [Oryza sativa] 50 2e-05
UniRef100_Q5ZBN9 Hypothetical protein P0704D04.8 [Oryza sativa] 48 4e-05
UniRef100_Q6H8C4 Hypothetical protein OJ1006_A02.44 [Oryza sativa] 45 4e-04
UniRef100_Q9M9H2 F14O23.12 [Arabidopsis thaliana] 45 5e-04
UniRef100_Q9ASJ0 Hypothetical protein P0439B06.27 [Oryza sativa] 43 0.001
UniRef100_Q9LH80 Gb|AAF43227.1 [Arabidopsis thaliana] 39 0.027
UniRef100_Q6EQW0 Hypothetical protein OSJNBa0086N11.28 [Oryza sa... 39 0.027
UniRef100_Q6ER70 Hypothetical protein OSJNBa0073A18.24 [Oryza sa... 37 0.10
UniRef100_Q8ID80 Hypothetical protein Phat96 [Plasmodium falcipa... 35 0.39
UniRef100_UPI00003C1C54 UPI00003C1C54 UniRef100 entry 33 1.1
UniRef100_Q5PIH8 Lysine decarboxylase [Salmonella enterica subsp... 33 1.5
UniRef100_Q60002 Lysine decarboxylase, inducible [Salmonella typ... 33 1.5
UniRef100_UPI00002D4229 UPI00002D4229 UniRef100 entry 33 1.9
UniRef100_Q60WH4 Hypothetical protein CBG19123 [Caenorhabditis b... 33 1.9
UniRef100_UPI0000467EDA UPI0000467EDA UniRef100 entry 32 2.5
UniRef100_UPI000029C063 UPI000029C063 UniRef100 entry 32 2.5
>UniRef100_Q9M9A2 F27J15.21 [Arabidopsis thaliana]
Length = 156
Score = 85.1 bits (209), Expect = 3e-16
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 44 KTKKLLSNMSNKALSQFG-KMKKTKKQRDNELNDGVWQKEILMGGKCEPLDFSGVIHYDI 102
+ K+L + +SNKA++ K +K E G+WQ+EILMGGKCEPLDFSGVI+YD
Sbjct: 72 RPKELFTTLSNKAMTMVRRKNPPEEKATAMEEEHGLWQREILMGGKCEPLDFSGVIYYDS 131
Query: 103 NGRQTGEVPLRSPRAIPFSRY 123
NGR EVP RSPR P Y
Sbjct: 132 NGRLLNEVPPRSPRGTPLPSY 152
>UniRef100_Q9LII3 Gb|AAF43227.1 [Arabidopsis thaliana]
Length = 195
Score = 83.2 bits (204), Expect = 1e-15
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 12/88 (13%)
Query: 42 KAKTKKLLSNMSNKALSQFGKMKK------TKK------QRDNELNDGVWQKEILMGGKC 89
+ + K+L + +SNKA++ G+ K TKK ++E GVWQ+EILMGGKC
Sbjct: 85 RVRPKELYTTLSNKAMTMVGRKNKAYDGGPTKKTAVEMVMEEDEEEYGVWQREILMGGKC 144
Query: 90 EPLDFSGVIHYDINGRQTGEVPLRSPRA 117
EPLD+SGVI+YD +G Q +VP RSPRA
Sbjct: 145 EPLDYSGVIYYDCSGHQLKQVPPRSPRA 172
>UniRef100_Q6ZIR5 Hypothetical protein OJ1038_A06.25 [Oryza sativa]
Length = 138
Score = 64.3 bits (155), Expect = 6e-10
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 55 KALSQFGKMKKTKKQRDNELNDGVWQKEILMGGKCEPLDFSGVIHYDINGRQTGE----- 109
KA+S + +K + DGVW+KEILMG +C+PLDFSGVI+YD GR+ +
Sbjct: 56 KAISSSRRRRKAGAELSFRAEDGVWRKEILMGERCQPLDFSGVIYYDAEGRRLEQPPPPR 115
Query: 110 VPLRSP 115
PLRSP
Sbjct: 116 SPLRSP 121
>UniRef100_Q656A2 Hypothetical protein P0596H06.16 [Oryza sativa]
Length = 171
Score = 57.4 bits (137), Expect = 7e-08
Identities = 27/52 (51%), Positives = 37/52 (70%), Gaps = 1/52 (1%)
Query: 69 QRDNELNDGVWQKEILMGGKCEPLDFSGVIHYDINGRQTGE-VPLRSPRAIP 119
+R+ + G+W+KEILMG +C+PLDFSGVI+YD +GR+ P RSP P
Sbjct: 105 RREEGDSGGLWRKEILMGERCQPLDFSGVIYYDADGRRLAHPPPPRSPMRSP 156
>UniRef100_Q5VPY8 Hypothetical protein B1096D03.33 [Oryza sativa]
Length = 138
Score = 49.7 bits (117), Expect = 2e-05
Identities = 23/55 (41%), Positives = 38/55 (68%), Gaps = 2/55 (3%)
Query: 64 KKTKKQRDNELNDGVWQKEILMGGKCEPLDFSGVIHYDINGRQTGEVPLRSPRAI 118
++ +++ + DGV +KEILM +C+ LDFSG+I+YD+ GR+ + P PRA+
Sbjct: 67 RRRRQELSFRVEDGVCRKEILMEERCQSLDFSGMIYYDVAGRRLEQPP--PPRAL 119
>UniRef100_Q5ZBN9 Hypothetical protein P0704D04.8 [Oryza sativa]
Length = 505
Score = 48.1 bits (113), Expect = 4e-05
Identities = 18/34 (52%), Positives = 25/34 (72%)
Query: 76 DGVWQKEILMGGKCEPLDFSGVIHYDINGRQTGE 109
+G+W++ ILMG +CEPL F G IHYD GR+ +
Sbjct: 426 EGLWRRAILMGERCEPLSFPGAIHYDSRGRRLSQ 459
>UniRef100_Q6H8C4 Hypothetical protein OJ1006_A02.44 [Oryza sativa]
Length = 299
Score = 45.1 bits (105), Expect = 4e-04
Identities = 23/40 (57%), Positives = 26/40 (64%), Gaps = 2/40 (5%)
Query: 78 VWQKEILMGGKCEPLDFSGVIHYDINGRQTGEVPLRSPRA 117
VWQK ILMGGKC+ +FSGVI+YD G P PRA
Sbjct: 98 VWQKNILMGGKCQLPEFSGVINYDAAGNIV--APSGRPRA 135
>UniRef100_Q9M9H2 F14O23.12 [Arabidopsis thaliana]
Length = 130
Score = 44.7 bits (104), Expect = 5e-04
Identities = 19/28 (67%), Positives = 23/28 (81%)
Query: 78 VWQKEILMGGKCEPLDFSGVIHYDINGR 105
+WQK ILMGGKC+ DFSGVI YD +G+
Sbjct: 88 LWQKNILMGGKCQLPDFSGVILYDADGQ 115
>UniRef100_Q9ASJ0 Hypothetical protein P0439B06.27 [Oryza sativa]
Length = 175
Score = 43.1 bits (100), Expect = 0.001
Identities = 18/34 (52%), Positives = 23/34 (66%)
Query: 73 ELNDGVWQKEILMGGKCEPLDFSGVIHYDINGRQ 106
E + +W+K I+MG KC PL FSG I YD +G Q
Sbjct: 121 EEEEALWRKTIMMGDKCRPLQFSGHIAYDSDGNQ 154
>UniRef100_Q9LH80 Gb|AAF43227.1 [Arabidopsis thaliana]
Length = 168
Score = 38.9 bits (89), Expect = 0.027
Identities = 19/34 (55%), Positives = 22/34 (63%)
Query: 68 KQRDNELNDGVWQKEILMGGKCEPLDFSGVIHYD 101
K+R D VWQ+ ILMG KCE FSG+I YD
Sbjct: 106 KERSLNAVDPVWQRPILMGEKCELPRFSGLILYD 139
>UniRef100_Q6EQW0 Hypothetical protein OSJNBa0086N11.28 [Oryza sativa]
Length = 202
Score = 38.9 bits (89), Expect = 0.027
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 78 VWQKEILMGGKCEPLDFSGVIHYDINGRQ-TGEVPLRS 114
VWQ+ ILMG +CE FSG+I YD +GR G P RS
Sbjct: 138 VWQRRILMGMRCELPRFSGLILYDEHGRPIRGTTPGRS 175
>UniRef100_Q6ER70 Hypothetical protein OSJNBa0073A18.24 [Oryza sativa]
Length = 143
Score = 37.0 bits (84), Expect = 0.10
Identities = 15/28 (53%), Positives = 21/28 (74%)
Query: 78 VWQKEILMGGKCEPLDFSGVIHYDINGR 105
+WQ+++LMG KC+ FSG+I YD GR
Sbjct: 89 IWQRKVLMGVKCQLPRFSGMILYDERGR 116
>UniRef100_Q8ID80 Hypothetical protein Phat96 [Plasmodium falciparum]
Length = 2020
Score = 35.0 bits (79), Expect = 0.39
Identities = 23/72 (31%), Positives = 37/72 (50%), Gaps = 4/72 (5%)
Query: 33 SRQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELNDGVWQK-EILMGGKCEP 91
++Q ++ K K KK+ N NK + + + KK K+ + N N+ + K EI KC
Sbjct: 1847 NKQNKQNKQNKKVKKIKKNKKNKKIKKNKRNKKIKRNKKNIQNNSLEDKIEIYESDKC-- 1904
Query: 92 LDFSGVIHYDIN 103
+ +GV DIN
Sbjct: 1905 -NHNGVSKCDIN 1915
>UniRef100_UPI00003C1C54 UPI00003C1C54 UniRef100 entry
Length = 2102
Score = 33.5 bits (75), Expect = 1.1
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 6 SSPESLSPKRQSNSSFFITISAILAMLSRQARRLKGKAKTKKLLSNMSNKALSQFGKMKK 65
SS + SP S+S FF IS L R +RR G A LS+ +K S+F +
Sbjct: 949 SSRHASSPSANSSSKFFSRIS-----LPRSSRR--GSAADSSPLSSPDSKPRSRFASFGR 1001
Query: 66 TKK--QRDNELNDG 77
+ + N+LNDG
Sbjct: 1002 ISRGGSQPNQLNDG 1015
>UniRef100_Q5PIH8 Lysine decarboxylase [Salmonella enterica subsp. enterica serovar
Paratypi A str. ATCC 9150]
Length = 714
Score = 33.1 bits (74), Expect = 1.5
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 28 ILAMLSRQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELNDGVWQKEILMGG 87
I+A A +KG A K+L++ +A+ ++K+ K + D D VWQ E + G
Sbjct: 405 IVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLKSESDGWFFD-VWQPEHIDGA 462
Query: 88 KCEPLDFSGVIH 99
+C PL H
Sbjct: 463 ECWPLRSDSAWH 474
>UniRef100_Q60002 Lysine decarboxylase, inducible [Salmonella typhimurium]
Length = 714
Score = 33.1 bits (74), Expect = 1.5
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 28 ILAMLSRQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRDNELNDGVWQKEILMGG 87
I+A A +KG A K+L++ +A+ ++K+ K + D D VWQ E + G
Sbjct: 405 IVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLKSESDGWFFD-VWQPEHIDGA 462
Query: 88 KCEPLDFSGVIH 99
+C PL H
Sbjct: 463 ECWPLRSDSAWH 474
>UniRef100_UPI00002D4229 UPI00002D4229 UniRef100 entry
Length = 288
Score = 32.7 bits (73), Expect = 1.9
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 28 ILAMLSRQARRLKGKAKTKKLLSNMSNKALSQF--GKMKKTKKQRDNELNDGVW 79
+ AM ++Q R+L T K L + KALS+ + K+ +++ N L D VW
Sbjct: 152 VAAMTNKQLRKLPSNNLTPKQLKTLPTKALSKLTPKQFKQLNRKQINALPDAVW 205
>UniRef100_Q60WH4 Hypothetical protein CBG19123 [Caenorhabditis briggsae]
Length = 1814
Score = 32.7 bits (73), Expect = 1.9
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 2 ANLTSSPESLSPKRQSNSSFFITISAILAMLSRQARRLKGKAKTKKLLSNMSNKALSQFG 61
A+ +S P LSP + S S+ + ++ + + + K + +K S K +
Sbjct: 676 ASTSSKPMKLSPPKFSKSASIDSTETVIHVKPEEKEK---KEEERKEESTHEKKKRRKKR 732
Query: 62 KMKKTKKQRDNEL----NDGVWQKEILM--GGKCEPLDFSGVIHYDINGR 105
K KTKK R++EL N G +LM + E YD+ GR
Sbjct: 733 KRMKTKKSREHELRFLKNSGNQTSPVLMDCSTQYEVFTTDSGSQYDVKGR 782
>UniRef100_UPI0000467EDA UPI0000467EDA UniRef100 entry
Length = 367
Score = 32.3 bits (72), Expect = 2.5
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 3 NLTSSPESLSPKRQSNSSFFI--TISAILAMLSRQARRLKGKAKTKKLLSNMSNKALSQF 60
N +SS R S S+ I T ++ +L + +K K KTK + NKA ++
Sbjct: 55 NNSSSSSKGKGSRFSKSNLQIEETEKSLWEILKEKEEYIKNKKKTKLYKKELDNKANKEY 114
Query: 61 GKMKKTKKQRDNELND 76
K+ K +K + +++D
Sbjct: 115 EKIMKEEKYMNQQISD 130
>UniRef100_UPI000029C063 UPI000029C063 UniRef100 entry
Length = 602
Score = 32.3 bits (72), Expect = 2.5
Identities = 24/86 (27%), Positives = 39/86 (44%), Gaps = 2/86 (2%)
Query: 32 LSRQARRLKGKAKTKKLLSNMSNKALSQFGKMKKTKKQRD-NELNDGVWQKEILMGGK-C 89
LSR+ K + + L+ N A S F K++R N +D V L+GG
Sbjct: 82 LSRRNTLHHSKQQQQTKLAKRRNTANSSFKHPSSGKRRRRANSESDSVLPTNFLLGGNIF 141
Query: 90 EPLDFSGVIHYDINGRQTGEVPLRSP 115
+PL+ + ++ ++N E P SP
Sbjct: 142 DPLNLNSLMDEEVNRALNAETPKSSP 167
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 190,119,336
Number of Sequences: 2790947
Number of extensions: 6925603
Number of successful extensions: 21276
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 21250
Number of HSP's gapped (non-prelim): 50
length of query: 123
length of database: 848,049,833
effective HSP length: 99
effective length of query: 24
effective length of database: 571,746,080
effective search space: 13721905920
effective search space used: 13721905920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC142222.6