BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC141865.9 - phase: 0 /pseudo
         (547 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9FZN9 Retroelement pol polyprotein-like [Arabidopsis ...   442  e-122
UniRef100_Q9SHM5 F7F22.15 [Arabidopsis thaliana]                      433  e-120
UniRef100_Q9MAR5 F28H19.8 protein [Arabidopsis thaliana]              424  e-117
UniRef100_Q9SHM3 F7F22.17 [Arabidopsis thaliana]                      363  7e-99
UniRef100_Q9LHC0 Retroelement pol polyprotein-like [Arabidopsis ...   353  9e-96
UniRef100_Q7XWW3 OSJNBb0058J09.16 protein [Oryza sativa]              330  5e-89
UniRef100_Q75H60 Putative reverse transcriptase [Oryza sativa]        307  6e-82
UniRef100_Q7XWA9 OSJNBa0061A09.17 protein [Oryza sativa]              305  3e-81
UniRef100_Q9SJS0 Putative retroelement pol polyprotein [Arabidop...   279  1e-73
UniRef100_Q7XQC1 OSJNBb0060M15.10 protein [Oryza sativa]              276  9e-73
UniRef100_Q8S647 Putative retroelement [Oryza sativa]                 275  2e-72
UniRef100_Q8LLX4 Putative retroelement [Oryza sativa]                 275  2e-72
UniRef100_Q8S8G8 Putative retroelement pol polyprotein [Arabidop...   266  2e-69
UniRef100_Q9LJS9 Retroelement pol polyprotein-like [Arabidopsis ...   250  9e-65
UniRef100_Q7FZN5 T14A16.1 protein [Arabidopsis thaliana]              247  7e-64
UniRef100_Q7XWS6 OSJNBa0091C12.6 protein [Oryza sativa]               233  1e-59
UniRef100_Q7XLF2 OSJNBa0013A04.17 protein [Oryza sativa]              226  1e-57
UniRef100_Q7XNX7 OSJNBb0026I12.3 protein [Oryza sativa]               212  3e-53
UniRef100_Q6L4N0 Hypothetical protein P0530H10.3 [Oryza sativa]       201  6e-50
UniRef100_Q9SI95 Putative retroelement pol polyprotein [Arabidop...   188  3e-46

>UniRef100_Q9FZN9 Retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1864

 Score =  442 bits (1136), Expect = e-122
 Identities = 223/389 (57%), Positives = 277/389 (70%), Gaps = 29/389 (7%)

Query: 1    IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
            IYYAS+T+D A V YATTEKELLAVV+A +KFR YLVGSK+TVYTDH+ ++++  KKD K
Sbjct: 1299 IYYASRTMDDAQVRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHIYAKKDTK 1358

Query: 61   PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
            PRL++ I LLQEFD+EI DKKG+EN VADHLSR+R   EDE+P+DDS P++QL  + Q N
Sbjct: 1359 PRLLRWILLLQEFDMEIVDKKGIENGVADHLSRMRI--EDEVPIDDSMPEEQLMAIQQLN 1416

Query: 121  A------------------PWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYL 162
                               PWYAD VN+L +G  PP LS  +KKKFF D+ H+Y DEPYL
Sbjct: 1417 ESAQIRKSLDQVCTIEEKLPWYADHVNYLVSGEEPPNLSSYEKKKFFKDINHFYWDEPYL 1476

Query: 163  FKRG*DGIFRRCIPENEVSSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLF 222
            +    D I+RRC+ E+E+  IL HCH S+YGGH +T K   KIL +GFWWPS+FKD   F
Sbjct: 1477 YTLCKDKIYRRCVSEDEIEGILLHCHGSAYGGHFATFKTVSKILQAGFWWPSMFKDAQEF 1536

Query: 223  ISKCDKCQRTGNITKRNEMPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKW 282
            ISKCD CQR GNI++RNEMP N ILEVEIFDVW IDF+GPFPSS+ N+YILVAVDYVSKW
Sbjct: 1537 ISKCDSCQRRGNISRRNEMPQNPILEVEIFDVWGIDFMGPFPSSYGNKYILVAVDYVSKW 1596

Query: 283  VEVIASLTNDAQVVIKLFKKNHFSRFGVPRVVISDGGSQNILKNFCKNLE*GTKLQHPIT 342
            VE IAS TNDA+VV+KLFK   F RFGVPR++ISDGG   I K F   L+     +H + 
Sbjct: 1597 VEAIASPTNDARVVLKLFKTIIFPRFGVPRIMISDGGKHFINKVFENLLK-----KHGVK 1651

Query: 343  HKLVDKWR----SQIDKSKLSLKKLFQPL 367
            HK+   +      Q++ S   +K + + +
Sbjct: 1652 HKVATPYHPQTSGQVEISNREIKAILEKI 1680


>UniRef100_Q9SHM5 F7F22.15 [Arabidopsis thaliana]
          Length = 1862

 Score =  433 bits (1114), Expect = e-120
 Identities = 222/369 (60%), Positives = 268/369 (72%), Gaps = 24/369 (6%)

Query: 1    IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
            IYYAS+TLD A   YATTEKELLAVV+A +KFR YLVGSK+TVYTDH+ +++L  KKD K
Sbjct: 1298 IYYASRTLDDAQGRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHLYAKKDTK 1357

Query: 61   PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLA--- 117
            PRL++ I LLQEFD+EI DKKG+EN  ADHLSR+R   E+ L +DDS P++QL ++    
Sbjct: 1358 PRLLRWILLLQEFDMEIVDKKGIENGAADHLSRMRI--EEPLLIDDSMPEEQLMVVEFFG 1415

Query: 118  ---------QTNA-----PWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLF 163
                     Q NA     PWYAD VN+LA GV PP L+  ++KKFF D+ HYY DEPYL+
Sbjct: 1416 KSYSGKEFHQLNAVEGESPWYADHVNYLACGVEPPNLTSYERKKFFRDIHHYYWDEPYLY 1475

Query: 164  KRG*DGIFRRCIPENEVSSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFI 223
                D I+RRC+ E+EV  IL HCH S+YGGH +T K   KIL +GFWWP++FKD   F+
Sbjct: 1476 TLCKDKIYRRCVSEDEVEGILLHCHGSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFV 1535

Query: 224  SKCDKCQRTGNITKRNEMPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWV 283
            SKCD CQR GNI++RNEMP N ILEVEIFDVW IDF+GPFPSS+ N+YILVAVDYVSKWV
Sbjct: 1536 SKCDSCQRKGNISRRNEMPQNPILEVEIFDVWGIDFMGPFPSSYGNKYILVAVDYVSKWV 1595

Query: 284  EVIASLTNDAQVVIKLFKKNHFSRFGVPRVVISDGGSQNILKNFCKNLE*GTKLQHPITH 343
            E IAS TNDA+VV+KLFK   F RFGVPRVVISDGG   I K F   L+     +H + H
Sbjct: 1596 EAIASPTNDAKVVLKLFKTIIFPRFGVPRVVISDGGKHFINKVFENLLK-----KHGVKH 1650

Query: 344  KLVDKWRSQ 352
            K+   +  Q
Sbjct: 1651 KVATPYNPQ 1659


>UniRef100_Q9MAR5 F28H19.8 protein [Arabidopsis thaliana]
          Length = 640

 Score =  424 bits (1089), Expect = e-117
 Identities = 209/345 (60%), Positives = 256/345 (73%), Gaps = 18/345 (5%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           IYYAS+TLD     YATTEKELL VV+A +KFR YLVGSK+TVYTDH+ +K++  KKD K
Sbjct: 297 IYYASRTLDDTQSRYATTEKELLVVVFAFEKFRSYLVGSKVTVYTDHAALKHIYAKKDTK 356

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQT- 119
           PRL++ I  LQEFD+EI DK+G EN VADHLSR+R T  + +P+DDS P++QL  +  + 
Sbjct: 357 PRLLRWILFLQEFDMEIVDKRGSENGVADHLSRMRMT--EAVPIDDSMPEEQLLAVGTSF 414

Query: 120 --------------NAPWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKR 165
                           PWY D VN+L AG++P ELS  QKKKFF D+ HYY DEP L+K+
Sbjct: 415 DKFKIETMCATRSGKLPWYVDLVNYLTAGIVPSELSSYQKKKFFRDINHYYWDEPVLYKK 474

Query: 166 G*DGIFRRCIPENEVSSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISK 225
           G DG+FRRCI E EV  +L  CH+S YGGH +T K   K+L +G WWPS+FKD H  I++
Sbjct: 475 GVDGLFRRCIAEEEVQGVLELCHNSPYGGHFATFKTVQKVLQAGLWWPSMFKDAHEHITR 534

Query: 226 CDKCQRTGNITKRNEMPLNNILEVEIFDVWVIDFIGPF-PSSFVNQYILVAVDYVSKWVE 284
           CD+CQR GNI++RNEMP N ILEVE+FDVW IDF+GPF P+S+ N+YILVAVDYVSKWVE
Sbjct: 535 CDRCQRVGNISRRNEMPQNPILEVEVFDVWGIDFMGPFEPASYGNKYILVAVDYVSKWVE 594

Query: 285 VIASLTNDAQVVIKLFKKNHFSRFGVPRVVISDGGSQNILKNFCK 329
            IAS TND++VV+KLFK   F RFG+PRVVISDGGS  I K F K
Sbjct: 595 AIASPTNDSKVVLKLFKTIIFPRFGIPRVVISDGGSHFINKVFEK 639


>UniRef100_Q9SHM3 F7F22.17 [Arabidopsis thaliana]
          Length = 1799

 Score =  363 bits (932), Expect = 7e-99
 Identities = 196/352 (55%), Positives = 238/352 (66%), Gaps = 39/352 (11%)

Query: 1    IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
            IYYAS+TLD A   YATTEKELL VV+A +KFR YLVGSK+TVYTDH+ +++L  KKD K
Sbjct: 1284 IYYASRTLDDAQGRYATTEKELLVVVFAFEKFRSYLVGSKVTVYTDHAALRHLYAKKDTK 1343

Query: 61   PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
            PRL++ I LLQEFD+EI DKKG+EN  ADHLSR+R   E+ L +DDS P++QL +     
Sbjct: 1344 PRLLRWILLLQEFDMEIVDKKGIENGAADHLSRMRI--EEPLLIDDSMPEEQLMV----- 1396

Query: 121  APWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEV 180
                   V F          SY  K+  F+ L     + P+           RC+ E+EV
Sbjct: 1397 -------VEFFGK-------SYSGKE--FHQLNAVEGESPW-----------RCVSEDEV 1429

Query: 181  SSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNE 240
              IL HCH S+YGGH +T K   KIL +GFWWP++FKD   F+SKCD CQR GNI++RNE
Sbjct: 1430 EGILLHCHGSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRRNE 1489

Query: 241  MPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLF 300
            MP N ILEVEIFDVW IDF+GPFPSS+ N+YILVAVDYVSKWVE IAS TNDA+VV+KLF
Sbjct: 1490 MPQNPILEVEIFDVWGIDFMGPFPSSYGNKYILVAVDYVSKWVEAIASPTNDAKVVLKLF 1549

Query: 301  KKNHFSRFGVPRVVISDGGSQNILKNFCKNLE*GTKLQHPITHKLVDKWRSQ 352
            K   F RFGVPRVVISDGG   I K F   L+     +H + HK+   +  Q
Sbjct: 1550 KTIIFPRFGVPRVVISDGGKHFINKVFENLLK-----KHGVKHKVATPYNPQ 1596


>UniRef100_Q9LHC0 Retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 897

 Score =  353 bits (905), Expect = 9e-96
 Identities = 191/352 (54%), Positives = 235/352 (66%), Gaps = 39/352 (11%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           IYYAS+TLD A   YATTEKELLAVV+A +KFR YLVGSK+TVYTDH+ +++L  KKD K
Sbjct: 382 IYYASRTLDDAQGRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHLYAKKDTK 441

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
           PRL++ I LLQEFD+EI DKKG+EN  ADHL R+R   E+ LP+DDS P++QL +     
Sbjct: 442 PRLLRWILLLQEFDMEIVDKKGIENGAADHLLRMRI--EEPLPIDDSMPEEQLMV----- 494

Query: 121 APWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEV 180
                  V F          SY  K+  F+ L     + P+           RC+ E+EV
Sbjct: 495 -------VEFFGK-------SYSGKE--FHQLNDVEGESPW-----------RCVSEDEV 527

Query: 181 SSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNE 240
             IL HCH S+YGGH +T K   KIL +GFWWP++FKD   F+SKCD CQR  NI++ NE
Sbjct: 528 EGILLHCHCSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKDNISRINE 587

Query: 241 MPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLF 300
           MP N I+EVEIFDVW IDF+G FPSS+ N+YILVA+DYVSKWVE IA  TNDA+VV+KLF
Sbjct: 588 MPQNPIVEVEIFDVWGIDFMGLFPSSYGNKYILVAIDYVSKWVEAIAIPTNDAKVVLKLF 647

Query: 301 KKNHFSRFGVPRVVISDGGSQNILKNFCKNLE*GTKLQHPITHKLVDKWRSQ 352
           K   F RFGVPRVVISDGG   I K F   L+     +H + HK+   +  Q
Sbjct: 648 KTIIFPRFGVPRVVISDGGKHFINKVFENLLK-----KHGVKHKVATPYHPQ 694


>UniRef100_Q7XWW3 OSJNBb0058J09.16 protein [Oryza sativa]
          Length = 1045

 Score =  330 bits (847), Expect = 5e-89
 Identities = 180/365 (49%), Positives = 229/365 (62%), Gaps = 23/365 (6%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           I YASKTL GA +NYATTEKELL VV+AIDKFR YLVG+K+ +YTDH+ +KYLL KKDAK
Sbjct: 602 ICYASKTLTGAQLNYATTEKELLTVVFAIDKFRSYLVGAKVIIYTDHAALKYLLTKKDAK 661

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
           PRL++ I LLQEFD+EIKDKKGVEN VADHLSRL  TN  E P++D   DD L       
Sbjct: 662 PRLLRWILLLQEFDIEIKDKKGVENYVADHLSRLHITNMQEQPINDLLRDDMLMTC---- 717

Query: 121 APWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEV 180
                          +PP     Q+K  +   +H + DEPYL++   DG+ RRC+P +E 
Sbjct: 718 ---------------IPP--GENQRKLKYESHRHIW-DEPYLYRVCSDGLLRRCVPTDEG 759

Query: 181 SSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNE 240
             I+  CH+S YGGH    +   KI  SGF+WP++++D   FI +C  CQR G IT R+ 
Sbjct: 760 LKIIERCHASPYGGHYGAFRTQAKIWQSGFFWPTMYEDSKEFIRRCTSCQRQGGITARDA 819

Query: 241 MPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLF 300
           MPL   L+VEIFDVW IDF+GPFP S   +YILVAVDYVSKWVE +     DA+   K+F
Sbjct: 820 MPLTYNLQVEIFDVWGIDFMGPFPKSRNCEYILVAVDYVSKWVEAMPCSAADARHAKKMF 879

Query: 301 KKNHFSRFGVPRVVISDGGSQNILKNFCKNLE*GTKLQHPITHKLVDKWRSQIDKSKLSL 360
            +  F RFG  R+VISD G   I K F ++L    + +H +      +   Q + S   +
Sbjct: 880 TETIFPRFGTRRMVISDRGFHFIDKTF-RDLLREMEAKHNVATPYHPQTSGQAETSNKQI 938

Query: 361 KKLFQ 365
           K + Q
Sbjct: 939 KNILQ 943


>UniRef100_Q75H60 Putative reverse transcriptase [Oryza sativa]
          Length = 743

 Score =  307 bits (786), Expect = 6e-82
 Identities = 163/340 (47%), Positives = 216/340 (62%), Gaps = 7/340 (2%)

Query: 27  YAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAKPRLIQLIFLLQEFDLEIKDKKGVENV 86
           +A+  FR YLV +K+ +YTDH+ +KY L KKDAKPRL++ I LLQEFDLEIKDKKGVEN 
Sbjct: 220 FAVGAFRSYLVRAKVIIYTDHAALKYPLTKKDAKPRLLRWILLLQEFDLEIKDKKGVENS 279

Query: 87  VADHLSRLRETNEDELPLDDSFPDDQLFLLAQTNAPWYADFVNFLAAGVLPPELSYQQKK 146
           VADHLSRL+ TN  E P++D   DD L  +  +N PWYA+ VN++    +PP  + +  K
Sbjct: 280 VADHLSRLQITNMPEQPINDFLRDDMLMTVRDSN-PWYANIVNYMVFKYIPPGKNQRNLK 338

Query: 147 KFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEVSSILTHCHSSSYGGHASTQKASFKIL 206
             +   +H + DEPYL++   DG+ RRC+P  E   I+  CH+S YGGH    +   KI 
Sbjct: 339 --YESRRHIW-DEPYLYRVCSDGLLRRCVPTEEGLKIIERCHASPYGGHYGVFRTQAKIW 395

Query: 207 HSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNEMPLNNILEVEIFDVWVIDFIGPFPSS 266
            SGF+WP++++D   F+ +C  CQR G IT R+ MPL   L+VEIFDVW IDF+GPFP S
Sbjct: 396 QSGFFWPTMYEDSKEFVRRCTSCQRQGGITARDAMPLTYNLQVEIFDVWGIDFMGPFPKS 455

Query: 267 FVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLFKKNHFSRFGVPRVVISDGGSQNILKN 326
              +YILVAVDYVSKWV+ +     DA+   K+F +  F +F  PR+VISDGGS  I K 
Sbjct: 456 RNCEYILVAVDYVSKWVKAMPCSATDARHAKKMFIEIIFPKFDTPRMVISDGGSHFIDKT 515

Query: 327 FCKNL-E*GTKLQHPITHKLVDKWRSQIDKSKLSLKKLFQ 365
           F   L E G K  H +      +   Q + S   +K + Q
Sbjct: 516 FRDLLREMGAK--HNVATPYHPQTSGQAETSNKQIKNILQ 553


>UniRef100_Q7XWA9 OSJNBa0061A09.17 protein [Oryza sativa]
          Length = 430

 Score =  305 bits (780), Expect = 3e-81
 Identities = 161/332 (48%), Positives = 212/332 (63%), Gaps = 25/332 (7%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           I YASKTL GA +NY+TTEKELLAVV           G+K+ VYTDH+ +KYLL KKDAK
Sbjct: 24  IAYASKTLTGAQLNYSTTEKELLAVV-----------GAKVVVYTDHAALKYLLTKKDAK 72

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
           PRLI+ I +LQEFD+EI +KKG+EN VADHLSR++ TN  EL ++D   DD L  +  ++
Sbjct: 73  PRLIRWILILQEFDIEINNKKGIENSVADHLSRMQITNMQELSINDYLRDDMLLKVTDSD 132

Query: 121 APWYADFVNFLAAGVLPP-----ELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCI 175
            PWYA  VNF+ A  +PP      LSY+ +K+ +        D PYL++   D + RRC+
Sbjct: 133 -PWYAPIVNFMVAWHVPPGENKKRLSYESRKRLW--------DAPYLYRVCSDSLLRRCV 183

Query: 176 PENEVSSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNI 235
           P +E   I+  C  + YG H    +   KI  SGF+WP+++ D   FI +C  CQ+ G I
Sbjct: 184 PADEGMEIIEKCRVAPYGSHYGAFRTHAKIWQSGFFWPTMYGDTKEFIRRCTSCQKHGGI 243

Query: 236 TKRNEMPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQV 295
           T ++ MPL   L+VE+FDVW IDF+GPFP  +  +YILVAVDYVSKWVE +     + + 
Sbjct: 244 TAQDAMPLTYNLQVELFDVWGIDFMGPFPKFYDCEYILVAVDYVSKWVEAMPCRAANTKH 303

Query: 296 VIKLFKKNHFSRFGVPRVVISDGGSQNILKNF 327
             ++F +  F  FG PR VISDGGS  I K F
Sbjct: 304 AHRMFDEIIFPCFGTPRTVISDGGSHFIDKTF 335


>UniRef100_Q9SJS0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 466

 Score =  279 bits (714), Expect = 1e-73
 Identities = 136/232 (58%), Positives = 166/232 (70%), Gaps = 5/232 (2%)

Query: 121 APWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEV 180
           +PWYAD VN+LA G+ PP L+  ++K FF D+ HYY DEPYL+    D I+R  + E+EV
Sbjct: 37  SPWYADHVNYLACGIEPPNLTSYERKNFFRDIHHYYWDEPYLYTLCKDKIYRSYVSEDEV 96

Query: 181 SSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNE 240
             IL HCH S+YGGH +T K   KIL +GFWWP++FKD   F+SKCD CQR GNI++RNE
Sbjct: 97  EGILLHCHDSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRRNE 156

Query: 241 MPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLF 300
           MP N ILEV+IFDVW IDF+GPFPSS+ N+YILV VDYVSKWVE IAS TNDA+VV+KLF
Sbjct: 157 MPQNPILEVDIFDVWGIDFMGPFPSSYGNKYILVVVDYVSKWVEAIASPTNDAKVVLKLF 216

Query: 301 KKNHFSRFGVPRVVISDGGSQNILKNFCKNLE*GTKLQHPITHKLVDKWRSQ 352
           K   F RFGV  VVISDGG   I K F   L+     +H + HK+   +  Q
Sbjct: 217 KTIIFPRFGVSWVVISDGGKHFINKVFENLLK-----KHGVKHKVATPYHPQ 263


>UniRef100_Q7XQC1 OSJNBb0060M15.10 protein [Oryza sativa]
          Length = 1028

 Score =  276 bits (707), Expect = 9e-73
 Identities = 153/346 (44%), Positives = 206/346 (59%), Gaps = 36/346 (10%)

Query: 20  KELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAKPRLIQLIFLLQEFDLEIKD 79
           K    VV+ IDKFR YLVG+K+ +YTDH+ +KYLL KKDAK RL++ I LLQEFDLEIKD
Sbjct: 513 KRAATVVFDIDKFRSYLVGAKVIIYTDHAALKYLLTKKDAKQRLLRWILLLQEFDLEIKD 572

Query: 80  KKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTNAPWYADFVNFLAAGVLPPE 139
           KKGVEN VADHLSRL+ T+  E P++D   DD L  +  +N PWYA+ VN++ +  +PP 
Sbjct: 573 KKGVENSVADHLSRLQITDMQEQPINDFLRDDMLMTVRDSN-PWYANIVNYMVSKYIPP- 630

Query: 140 LSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEVSSILTHCHSSSYGGHASTQ 199
               Q+K  + + +H + DEPYL++   DG+ RRC+P N+   I+  C +S YG H    
Sbjct: 631 -GENQRKLKYENRRHIW-DEPYLYRVCSDGLLRRCVPTNKGLRIIERCLASPYGSHYGAF 688

Query: 200 KASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNEMPLNNILEVEIFDVWVIDF 259
           +   KI  SGF+WP++++D   F+ +C  CQR G IT R+ MPL   L+ EIFDVW IDF
Sbjct: 689 RTQAKIWQSGFFWPTMYEDSTEFVRRCTSCQRQGGITARDAMPLTYNLQGEIFDVWGIDF 748

Query: 260 IGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLFKKNHFSRFGVPRVVISDGG 319
           +GPFP S   +YILVAVDYVSK                               +VISDGG
Sbjct: 749 MGPFPKSRNCEYILVAVDYVSK-------------------------------MVISDGG 777

Query: 320 SQNILKNFCKNLE*GTKLQHPITHKLVDKWRSQIDKSKLSLKKLFQ 365
           S  I K F ++L    + +H +      +   Q + S   +K + Q
Sbjct: 778 SHFIDKTF-RDLLREMRAKHNVATPYHPQTSGQAETSNKQIKNILQ 822


>UniRef100_Q8S647 Putative retroelement [Oryza sativa]
          Length = 1085

 Score =  275 bits (704), Expect = 2e-72
 Identities = 154/318 (48%), Positives = 192/318 (59%), Gaps = 56/318 (17%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           I YASKTL GA +NYATTEKELLAVV++IDKFR YLVG+++ +YTDH+ +KYLL KKDAK
Sbjct: 549 ICYASKTLTGAQLNYATTEKELLAVVFSIDKFRSYLVGAEVIIYTDHAALKYLLTKKDAK 608

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
           PRL++ I LLQEFDLEIKD+KGVEN VADHLSRL+ TN  E P++D   DD L  ++ +N
Sbjct: 609 PRLLRWILLLQEFDLEIKDRKGVENSVADHLSRLQITNMQEQPINDFLRDDMLMTVSDSN 668

Query: 121 APWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEV 180
            PWY + VN++ +  +PP     Q+K  +   +H + DEPYL++       RRC      
Sbjct: 669 -PWYVNIVNYMVSMYIPP--GENQRKLKYESRRHIW-DEPYLYREDSREFIRRC------ 718

Query: 181 SSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNE 240
                                                           CQR G IT R+ 
Sbjct: 719 ----------------------------------------------TSCQRQGGITTRDA 732

Query: 241 MPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLF 300
           MPL   L+VEIFDVW IDF+GPFP S   +YILVAVDYVSKWVE +     DA+   K+F
Sbjct: 733 MPLTYNLQVEIFDVWGIDFMGPFPKSRSCEYILVAVDYVSKWVEAMPCSAADARHAKKMF 792

Query: 301 KKNHFSRFGVPRVVISDG 318
            +  F RFG PR+VISDG
Sbjct: 793 TEIIFPRFGTPRMVISDG 810


>UniRef100_Q8LLX4 Putative retroelement [Oryza sativa]
          Length = 1093

 Score =  275 bits (704), Expect = 2e-72
 Identities = 154/318 (48%), Positives = 192/318 (59%), Gaps = 56/318 (17%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           I YASKTL GA +NYATTEKELLAVV++IDKFR YLVG+++ +YTDH+ +KYLL KKDAK
Sbjct: 557 ICYASKTLTGAQLNYATTEKELLAVVFSIDKFRSYLVGAEVIIYTDHAALKYLLTKKDAK 616

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
           PRL++ I LLQEFDLEIKD+KGVEN VADHLSRL+ TN  E P++D   DD L  ++ +N
Sbjct: 617 PRLLRWILLLQEFDLEIKDRKGVENSVADHLSRLQITNMQEQPINDFLRDDMLMTVSDSN 676

Query: 121 APWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEV 180
            PWY + VN++ +  +PP     Q+K  +   +H + DEPYL++       RRC      
Sbjct: 677 -PWYVNIVNYMVSMYIPP--GENQRKLKYESRRHIW-DEPYLYREDSREFIRRC------ 726

Query: 181 SSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNE 240
                                                           CQR G IT R+ 
Sbjct: 727 ----------------------------------------------TSCQRQGGITTRDA 740

Query: 241 MPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLF 300
           MPL   L+VEIFDVW IDF+GPFP S   +YILVAVDYVSKWVE +     DA+   K+F
Sbjct: 741 MPLTYNLQVEIFDVWGIDFMGPFPKSRSCEYILVAVDYVSKWVEAMPCSAADARHAKKMF 800

Query: 301 KKNHFSRFGVPRVVISDG 318
            +  F RFG PR+VISDG
Sbjct: 801 TEIIFPRFGTPRMVISDG 818


>UniRef100_Q8S8G8 Putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 930

 Score =  266 bits (679), Expect = 2e-69
 Identities = 134/248 (54%), Positives = 167/248 (67%), Gaps = 9/248 (3%)

Query: 122 PWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEVS 181
           PWYAD VN+LAA V P   +   KK+F  +++ Y  DEPYL+K   DGI+RRCI   EV 
Sbjct: 137 PWYADIVNYLAADVEPDNFTDYNKKRFLREIRRYQWDEPYLYKHSYDGIYRRCIAATEVP 196

Query: 182 SILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNEM 241
           SIL+HCHSSSYGGH +T K   K+L + FWWP++F+D   FIS+CD CQR G I+KRNEM
Sbjct: 197 SILSHCHSSSYGGHFATFKTVSKVLQADFWWPTMFRDTQKFISQCDPCQRRGKISKRNEM 256

Query: 242 PLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLFK 301
           P N  LEVE+FD W IDF+GPFP S  N YILV VDYVSKWVE IASL ND+ VV+KLFK
Sbjct: 257 PPNFRLEVEVFDRWGIDFMGPFPPSNKNLYILVDVDYVSKWVEAIASLKNDSAVVMKLFK 316

Query: 302 KNHFSRFGVPRVVISDGGSQNILKNFCKNLE*GTKLQHPITHKLVDKWR----SQIDKSK 357
              F RFGVPR+VISDG    I K   K L     LQ+ + H++   +      Q++ S 
Sbjct: 317 SIIFPRFGVPRIVISDGDKHFINKILEKLL-----LQYGVQHRVATPYHPQTSGQVEVSN 371

Query: 358 LSLKKLFQ 365
             +K++ +
Sbjct: 372 RQIKEILE 379



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 35/63 (55%), Positives = 52/63 (81%), Gaps = 2/63 (3%)

Query: 54  LNKKDAKPRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQL 113
           + KKDAKPRL+  I LLQEFD+E++DKKGVEN VADHLSR+R   +D++P++D  P++ +
Sbjct: 1   MQKKDAKPRLLIWILLLQEFDIEVRDKKGVENGVADHLSRIR--IDDDVPINDFLPEENI 58

Query: 114 FLL 116
           +++
Sbjct: 59  YMI 61


>UniRef100_Q9LJS9 Retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1118

 Score =  250 bits (638), Expect = 9e-65
 Identities = 162/355 (45%), Positives = 208/355 (57%), Gaps = 58/355 (16%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           IYYAS+TLDGA VNYATTEKELL +V+A +KFR YLV SK+ V+TDH+T++YLL+KKDAK
Sbjct: 615 IYYASRTLDGAQVNYATTEKELLVIVFAFEKFRSYLVRSKVIVHTDHATLRYLLSKKDAK 674

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
           PRL++ I LLQ+FDLEIKDKKG+EN VAD+LSRLR   E+E+P+ D+ P + L  +    
Sbjct: 675 PRLLRWILLLQDFDLEIKDKKGIENGVADNLSRLRV--EEEVPMRDTLPGENLASIEDC- 731

Query: 121 APWYADFVNFLAAGVLPPELSY--QQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPEN 178
              Y D V  L    L     +       ++ D  +Y S E               +P  
Sbjct: 732 ---YMDEVERLRVSTLELMTLHTGDSNLPWYADFANYLSCE---------------LPPP 773

Query: 179 EVSSILTHCHSSSYGGHASTQKASFKILHSGFW-WPSLFKDVHLFISKCDKCQRTGNITK 237
           + +                ++K   K +   +W  P L+K          KC    N+ +
Sbjct: 774 DFTGY--------------SKKKFLKDVQRYYWDEPYLYK----------KC--ADNLFR 807

Query: 238 RNEMPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVI 297
           R  +P + + EV  FDVW IDF+GPFPSS+ N+YILVAVDYVSKWVE IA   NDA VV+
Sbjct: 808 RC-IPESEVEEV--FDVWGIDFMGPFPSSYGNEYILVAVDYVSKWVEAIACRKNDAVVVL 864

Query: 298 KLFKKNHFSRFGVPRVVISDGGSQNILKNFCKNLE*GTKLQHPITHKLVDKWRSQ 352
           KLFKK  F RFGVPRVVISDGG   I K F   L      +H + HK+   +  Q
Sbjct: 865 KLFKKIIFPRFGVPRVVISDGGRHFINKVFANLL-----AKHGVNHKVATPYHPQ 914


>UniRef100_Q7FZN5 T14A16.1 protein [Arabidopsis thaliana]
          Length = 276

 Score =  247 bits (630), Expect = 7e-64
 Identities = 140/286 (48%), Positives = 178/286 (61%), Gaps = 39/286 (13%)

Query: 70  LQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTNAPWYADFVN 129
           ++ FD+EI DKK +EN  ADHLSR+R   E+ +P+DDS  ++QL +            V 
Sbjct: 5   IRGFDIEIVDKKDIENGAADHLSRMRI--EERIPIDDSMLEEQLMV------------VE 50

Query: 130 FLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEVSSILTHCHS 189
           F          SY  K+  F+ L       P+           R + E+EV  IL HCH 
Sbjct: 51  FFGG-------SYSGKE--FHQLNVVEGRSPW-----------RYVSEDEVEGILLHCHC 90

Query: 190 SSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNEMPLNNILEV 249
           S+YGG+ +T K   KIL +GFWWP++FK+   F+ KCD C R GNI+KRNEMP N ILEV
Sbjct: 91  STYGGNFTTFKTVSKILQAGFWWPTMFKEAQEFVLKCDSCHRKGNISKRNEMPQNPILEV 150

Query: 250 EIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLFKKNHFSRFG 309
           E+FDVW IDFIGPFPSS+ N+YILVAVDYVSKW+E  AS TNDA+VV+KLFK   FSRFG
Sbjct: 151 ELFDVWGIDFIGPFPSSYGNKYILVAVDYVSKWIEATASPTNDAKVVLKLFKTIIFSRFG 210

Query: 310 VPRVVISDGGSQNILKNFCKNLE*GTKLQHPITHKLVDKWRSQIDK 355
           VPRVVISDGG   I K F   L+     +H + H +   +++Q  K
Sbjct: 211 VPRVVISDGGKHFINKVFENLLK-----KHGVKHGVYVMFKTQKKK 251


>UniRef100_Q7XWS6 OSJNBa0091C12.6 protein [Oryza sativa]
          Length = 781

 Score =  233 bits (594), Expect = 1e-59
 Identities = 117/218 (53%), Positives = 153/218 (69%), Gaps = 4/218 (1%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           I YASKTL GA +NYATTEKELLAVV+AI+KFR YLVG+K+ VYTDH+ +KYLL KKDAK
Sbjct: 566 ITYASKTLTGAQLNYATTEKELLAVVFAIEKFRSYLVGAKVVVYTDHAALKYLLTKKDAK 625

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
           PR+I+ I LLQEFD+EI DKKGVEN VADHLSR++ TN  +L ++D   DD    +  ++
Sbjct: 626 PRVIRWILLLQEFDIEIMDKKGVENYVADHLSRMQITNMQKLLINDYLRDDMRLKVIDSD 685

Query: 121 APWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEV 180
            PWYA  VNF+A G +PP    + KK+   + + +  D PYLF+   DG+ R C+  +E 
Sbjct: 686 -PWYATIVNFMATGHVPP---VENKKRLIYESRRHLWDAPYLFRVCSDGLLRICVSTDEG 741

Query: 181 SSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKD 218
             I+  CH++ YGGH    +   KI  SGF+WPS++ D
Sbjct: 742 IMIIEKCHAAPYGGHYGAFRTHAKIWQSGFFWPSMYDD 779


>UniRef100_Q7XLF2 OSJNBa0013A04.17 protein [Oryza sativa]
          Length = 632

 Score =  226 bits (577), Expect = 1e-57
 Identities = 119/249 (47%), Positives = 157/249 (62%), Gaps = 4/249 (1%)

Query: 52  YLLNKKDAKPRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDD 111
           YLL KKDAKPRL+Q I LLQEFDLEIKDKKGVEN +A HLSRL  TN  E P+++   DD
Sbjct: 387 YLLTKKDAKPRLLQWILLLQEFDLEIKDKKGVENSIAYHLSRLPITNTQEQPINEFLRDD 446

Query: 112 QLFLLAQTNAPWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIF 171
            L +  + + PWYA+ VN++ +  +PP  + +  K  +   +H + DE YL+    DG+ 
Sbjct: 447 ML-MTVRDSKPWYANIVNYMVSKYIPPRENQRMLK--YESRRHIW-DEAYLYTVCSDGLL 502

Query: 172 RRCIPENEVSSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQR 231
           RRC+P  E   I+  CH+  YG H    +   KI   GF+WP++++D   F+ +   CQR
Sbjct: 503 RRCVPTEEGFMIIEQCHAPPYGRHYVAFRTQAKIWQCGFFWPTMYEDSKEFVRRYPSCQR 562

Query: 232 TGNITKRNEMPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTN 291
            G IT R+ MPL   L+VEIFDVW IDF+ PFP     + ILVAVDYVSKWVE +     
Sbjct: 563 QGGITARDAMPLTYNLQVEIFDVWGIDFMRPFPKCRNCENILVAVDYVSKWVEAMPCSAV 622

Query: 292 DAQVVIKLF 300
           DA+   K+F
Sbjct: 623 DAKHAKKMF 631


>UniRef100_Q7XNX7 OSJNBb0026I12.3 protein [Oryza sativa]
          Length = 589

 Score =  212 bits (539), Expect = 3e-53
 Identities = 113/216 (52%), Positives = 150/216 (69%), Gaps = 5/216 (2%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQY-LVGSKITVYTDHSTIKYLLNKKDA 59
           I YAS+TL GA  NYATTEKELLAVV+AIDKFR+  LVG+K+ VYT+H+ +KYLL KKDA
Sbjct: 292 ICYASETLAGAQSNYATTEKELLAVVFAIDKFRRSDLVGAKVIVYTEHAALKYLLTKKDA 351

Query: 60  KPRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQT 119
           KPRL++ I LLQEFDLEIKDKKGVEN VADHLSRL+ TN  E P++    DD L +  + 
Sbjct: 352 KPRLLRWIPLLQEFDLEIKDKKGVENSVADHLSRLQLTNMQEPPINYFLQDDML-MAVRN 410

Query: 120 NAPWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENE 179
           + PWYA+ VN++ +  +P      Q+K  +    H + DEPYL++   +G+ RRC+P+ E
Sbjct: 411 SDPWYANIVNYMVSKYVPQ--GENQRKLKYESHCHIW-DEPYLYRVCSNGLLRRCVPKEE 467

Query: 180 VSSILTHCHSSSYGGHASTQKASFKILHSGFWWPSL 215
              I+  CH++ Y GH    +   KI  S F+WP++
Sbjct: 468 GFKIIERCHAAPYRGHYGAFRTQAKIWQSRFFWPTM 503


>UniRef100_Q6L4N0 Hypothetical protein P0530H10.3 [Oryza sativa]
          Length = 903

 Score =  201 bits (510), Expect = 6e-50
 Identities = 135/375 (36%), Positives = 181/375 (48%), Gaps = 82/375 (21%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           I YASKTL GA +NYATTEKELLA                                    
Sbjct: 555 IAYASKTLTGAQLNYATTEKELLA------------------------------------ 578

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
                L+F + +F L +   K                   ELP++D   D+ L  +  ++
Sbjct: 579 -----LVFAIDKFRLYLVGAK-------------------ELPINDYLRDNMLLKVTDSD 614

Query: 121 APWYADFVNFLAAGVLPPELSYQQKKKFFNDLKHYYSDEPYLFKRG*DGIFRRCIPENEV 180
            PWYA  VNF+ AG +PP    + KK+   + + +  D PYL+         R   ++E 
Sbjct: 615 -PWYATIVNFMVAGHVPPG---ENKKRLIYESRRHLWDAPYLY---------RVCSDDEG 661

Query: 181 SSILTHCHSSSYGGHASTQKASFKILHSGFWWPSLFKDVHLFISKCDKCQRTGNITKRNE 240
             I+  CH++ YGGH    +   KI  SGF+WPS++ D   FI +C  CQ+ G IT R+ 
Sbjct: 662 MKIIKKCHAALYGGHYGAFRTHAKIWQSGFFWPSMYDDTKEFIRRCTSCQKHGGITARDA 721

Query: 241 MPLNNILEVEIFDVWVIDFIGPFPSSFVNQYILVAVDYVSKWVEVIASLTNDAQVVIKLF 300
           MPL   L+VE+FDVW IDF+GPFP S+  +YILVAVDYVSKWVE +     DA+    +F
Sbjct: 722 MPLTYNLQVELFDVWGIDFMGPFPKSYDCEYILVAVDYVSKWVEAMPCRAADAKHARWMF 781

Query: 301 KKNHFSRFGVPRVVISDGGSQNI---LKNFCKNL---E*GTKLQHPITHKLVDKWRSQID 354
            +  F RF   R+VISDGGS  +    +NF K L          HP T    +    QI 
Sbjct: 782 HEIIFPRFRTLRMVISDGGSHFVDKTFRNFLKELGARHNSATPYHPQTSGQAETSNKQI- 840

Query: 355 KSKLSLKKLFQPLGK 369
             K  L+K    +GK
Sbjct: 841 --KNILQKTINEMGK 853


>UniRef100_Q9SI95 Putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 301

 Score =  188 bits (478), Expect = 3e-46
 Identities = 96/173 (55%), Positives = 119/173 (68%), Gaps = 20/173 (11%)

Query: 1   IYYASKTLDGALVNYATTEKELLAVVYAIDKFRQYLVGSKITVYTDHSTIKYLLNKKDAK 60
           IYYAS T+D   V YATTEKELLAVV+A +KFR YLVGSK+TVYTDH+ ++++  KKD K
Sbjct: 131 IYYASGTMDDTQVRYATTEKELLAVVFAFEKFRSYLVGSKVTVYTDHAALRHIYAKKDTK 190

Query: 61  PRLIQLIFLLQEFDLEIKDKKGVENVVADHLSRLRETNEDELPLDDSFPDDQLFLLAQTN 120
           PRL++ I LLQEFD+EI DKKG+EN VADHLSR+R   EDE+P+DDS P++QL  + Q N
Sbjct: 191 PRLLRWILLLQEFDMEIVDKKGIENGVADHLSRMR--IEDEVPIDDSMPEEQLMAIQQLN 248

Query: 121 AP------------------WYADFVNFLAAGVLPPELSYQQKKKFFNDLKHY 155
                               WYAD V +L  G  PP LS  +KKKFF D+ H+
Sbjct: 249 ESAQINKSLDQVCAVEDKLMWYADHVKYLFGGEEPPNLSSYEKKKFFKDINHF 301


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.336    0.148    0.464 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 831,829,329
Number of Sequences: 2790947
Number of extensions: 34183570
Number of successful extensions: 132783
Number of sequences better than 10.0: 2190
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 604
Number of HSP's that attempted gapping in prelim test: 126798
Number of HSP's gapped (non-prelim): 3741
length of query: 547
length of database: 848,049,833
effective HSP length: 132
effective length of query: 415
effective length of database: 479,644,829
effective search space: 199052604035
effective search space used: 199052604035
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 77 (34.3 bits)