BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141110.1 + phase: 0 /pseudo
(143 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O23864 Polyprotein [Oryza australiensis] 159 1e-38
UniRef100_Q7Y1M7 Putative polyprotein [Oryza sativa] 153 9e-37
UniRef100_Q5R1J2 Integrase core domain, putative [Oryza sativa] 152 2e-36
UniRef100_Q7XX19 OSJNBa0071G03.10 protein [Oryza sativa] 151 3e-36
UniRef100_Q75H25 Putative polyprotein [Oryza sativa] 147 6e-35
UniRef100_Q7XVS4 OSJNBa0067G20.17 protein [Oryza sativa] 140 5e-33
UniRef100_Q94H32 Putative polyprotein [Oryza sativa] 139 1e-32
UniRef100_Q84SQ3 Putative polyprotein [Oryza sativa] 138 2e-32
UniRef100_Q7XLR4 OSJNBb0093G06.7 protein [Oryza sativa] 129 1e-29
UniRef100_Q7XP00 OSJNBb0089K06.4 protein [Oryza sativa] 122 2e-27
UniRef100_Q75L70 Putative polyprotein [Oryza sativa] 108 2e-23
UniRef100_Q7XMT3 OSJNBa0029L02.4 protein [Oryza sativa] 100 1e-20
UniRef100_Q84R90 Putative polyprotein [Oryza sativa] 90 1e-17
UniRef100_Q60D50 Putative polyprotein [Solanum demissum] 87 1e-16
UniRef100_Q9S9A8 BARE-1 polyprotein [Hordeum vulgare] 87 1e-16
UniRef100_Q7X7F2 OSJNBa0023J03.14 protein [Oryza sativa] 59 3e-08
UniRef100_Q6UUI9 Putative polyprotein [Oryza sativa] 56 2e-07
UniRef100_Q7Q8Q2 ENSANGP00000017936 [Anopheles gambiae str. PEST] 46 2e-04
UniRef100_Q7Q8Q3 ENSANGP00000017908 [Anopheles gambiae str. PEST] 42 0.003
UniRef100_Q6PCE9 MGC69174 protein [Xenopus laevis] 38 0.054
>UniRef100_O23864 Polyprotein [Oryza australiensis]
Length = 1317
Score = 159 bits (402), Expect = 1e-38
Identities = 77/137 (56%), Positives = 101/137 (73%)
Query: 6 STNILRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHA 65
ST LRS++EKEKL TNF+DW RN+RIVL E+K YVL+ P PE P A+A R
Sbjct: 8 STFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATARRGFE 67
Query: 66 KHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTK 125
KH ND++++SC+MLA+M+PELQKQ+E A I+ L+ ++E QAR ERF+ SK+LF+ +
Sbjct: 68 KHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTSKSLFACR 127
Query: 126 LSEGGPVGPHVLKMIGY 142
L EG PV PHV+KMIGY
Sbjct: 128 LVEGNPVSPHVIKMIGY 144
>UniRef100_Q7Y1M7 Putative polyprotein [Oryza sativa]
Length = 1161
Score = 153 bits (386), Expect = 9e-37
Identities = 77/144 (53%), Positives = 104/144 (71%), Gaps = 1/144 (0%)
Query: 1 MANNASTNI-LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAA 59
MA A +N LRS++EKEKLT TNF+DW RN+RIVL E K +VL P P P A AA
Sbjct: 1 MAAPAPSNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAA 60
Query: 60 LRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSK 119
R H K ND +++SC+MLA+M+PELQ+Q+E + A +I L+ ++E+QAR ERF+ SK
Sbjct: 61 QRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSK 120
Query: 120 ALFSTKLSEGGPVGPHVLKMIGYS 143
+LF+ +L+EG V PHV+KMIGY+
Sbjct: 121 SLFACRLAEGNLVSPHVIKMIGYT 144
>UniRef100_Q5R1J2 Integrase core domain, putative [Oryza sativa]
Length = 1184
Score = 152 bits (383), Expect = 2e-36
Identities = 72/134 (53%), Positives = 99/134 (73%)
Query: 10 LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLN 69
LRS++EKEKLT TN +DW RN+RIVL E K +VL P P P A AA R H K N
Sbjct: 11 LRSILEKEKLTGTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHEKRCN 70
Query: 70 DSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEG 129
D +++SC+MLA+M+PELQ+Q+E + A +I L+ ++E+QAR +RF+ SK+LF+ +L+EG
Sbjct: 71 DYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAKRFNTSKSLFACRLAEG 130
Query: 130 GPVGPHVLKMIGYS 143
PV PHV+KMIGY+
Sbjct: 131 NPVSPHVIKMIGYN 144
>UniRef100_Q7XX19 OSJNBa0071G03.10 protein [Oryza sativa]
Length = 948
Score = 151 bits (382), Expect = 3e-36
Identities = 75/144 (52%), Positives = 104/144 (72%), Gaps = 1/144 (0%)
Query: 1 MANNASTNI-LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAA 59
MA +A +N LRS++EKEKLT TNF+DW RN+RIVL E K ++L P P P A AA
Sbjct: 78 MAAHAPSNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFLLIQPFPADLPNNAPAA 137
Query: 60 LRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSK 119
R H + ND +++SC+MLA+M+PELQ Q+E + A +I L+ ++E+QAR ERF+ SK
Sbjct: 138 QRRKHERRCNDYLDISCLMLATMSPELQSQYEALDAHTIITGLRNMFEDQARAERFNTSK 197
Query: 120 ALFSTKLSEGGPVGPHVLKMIGYS 143
LF+ +L++G PV PHV+KMIGY+
Sbjct: 198 FLFAYRLAQGNPVSPHVIKMIGYT 221
>UniRef100_Q75H25 Putative polyprotein [Oryza sativa]
Length = 1063
Score = 147 bits (370), Expect = 6e-35
Identities = 69/134 (51%), Positives = 97/134 (71%)
Query: 10 LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLN 69
LR ++EKEKLT TN +DW RN+RIVL E K +VL P P P A AA R H +
Sbjct: 103 LRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHERRCK 162
Query: 70 DSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEG 129
+ +++SC+MLA+M+PELQ+Q+E + A +I L+ ++E+QAR ERF+ SK+LF+ +L+EG
Sbjct: 163 EYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEG 222
Query: 130 GPVGPHVLKMIGYS 143
PV PHV+KMIGY+
Sbjct: 223 NPVSPHVIKMIGYT 236
>UniRef100_Q7XVS4 OSJNBa0067G20.17 protein [Oryza sativa]
Length = 276
Score = 140 bits (354), Expect = 5e-33
Identities = 68/142 (47%), Positives = 100/142 (69%)
Query: 2 ANNASTNILRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALR 61
A +S+ LRS++EKEKL TNF+DW RN+RIVL E K +VL+ P P P A+AA R
Sbjct: 5 APTSSSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHKEFVLEEPFPTDLPNNATAARR 64
Query: 62 NAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKAL 121
H K N+ +++SC+ML +++PE Q+Q++ + A +I L ++E QAR ERF+ SK+L
Sbjct: 65 REHEKRCNEYLDISCLMLVTISPEFQRQYQTLDAHTIITRLCNMFEYQARAERFNTSKSL 124
Query: 122 FSTKLSEGGPVGPHVLKMIGYS 143
F+ +L+EG V P+V+KMIGY+
Sbjct: 125 FACRLAEGNAVSPNVIKMIGYT 146
>UniRef100_Q94H32 Putative polyprotein [Oryza sativa]
Length = 262
Score = 139 bits (351), Expect = 1e-32
Identities = 67/134 (50%), Positives = 95/134 (70%)
Query: 10 LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLN 69
LRS++EKE+LT TNF+DW N+ IVL E K +VL P P P A A R+ H K N
Sbjct: 11 LRSILEKEELTGTNFMDWYCNLGIVLRQEHKEFVLTQPFPADLPNNAPVAQRSEHEKRCN 70
Query: 70 DSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEG 129
D +++SC+MLA+M+PE Q+Q+E + A +I L+ ++E+QAR ERF+ K+LF+ +L+EG
Sbjct: 71 DYLDISCLMLATMSPEFQRQYEALDAHTIITGLRNMFEDQARAERFNTLKSLFACRLAEG 130
Query: 130 GPVGPHVLKMIGYS 143
PV HV+KMIGY+
Sbjct: 131 NPVSLHVIKMIGYT 144
>UniRef100_Q84SQ3 Putative polyprotein [Oryza sativa]
Length = 478
Score = 138 bits (348), Expect = 2e-32
Identities = 67/134 (50%), Positives = 94/134 (70%)
Query: 10 LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLN 69
L S++EKEKLT TNF+DW N+RIVL E K +VL P P P A AA H + N
Sbjct: 11 LWSILEKEKLTGTNFLDWYHNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQCREHERRCN 70
Query: 70 DSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEG 129
+ +++SC+MLA+M+PELQ+Q+E + +I L+ ++E+QAR ERF+ SK LF+ +L+EG
Sbjct: 71 EYLDISCLMLATMSPELQRQYEALNDHTIITGLRNMFEDQARAERFNTSKFLFACRLAEG 130
Query: 130 GPVGPHVLKMIGYS 143
PV HV+KMIGY+
Sbjct: 131 NPVSLHVIKMIGYT 144
>UniRef100_Q7XLR4 OSJNBb0093G06.7 protein [Oryza sativa]
Length = 923
Score = 129 bits (325), Expect = 1e-29
Identities = 64/125 (51%), Positives = 88/125 (70%)
Query: 10 LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLN 69
LRS++EKEKLT TNF+DW N+RIVL E K +VL P P P A AA R H K N
Sbjct: 11 LRSILEKEKLTGTNFMDWYGNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHKKQCN 70
Query: 70 DSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEG 129
D +++SC+MLA+M+PELQ+Q+E + A +I L+ ++E+QAR ERF+ SK+LF+ +L+E
Sbjct: 71 DYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEV 130
Query: 130 GPVGP 134
P P
Sbjct: 131 NPSLP 135
>UniRef100_Q7XP00 OSJNBb0089K06.4 protein [Oryza sativa]
Length = 873
Score = 122 bits (306), Expect = 2e-27
Identities = 59/120 (49%), Positives = 86/120 (71%)
Query: 10 LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLN 69
LRS++EKEKLT TNF+DW RN+RIVL E K +VL P P P A AA H + N
Sbjct: 11 LRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTQPFPVDLPNNAIAAQCREHERRCN 70
Query: 70 DSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEG 129
+ ++SC+MLA+M+P++Q+Q+E + A +I L+ ++E+QAR ERF+ SK+LF+ +L+EG
Sbjct: 71 EYHDISCLMLATMSPKIQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACRLAEG 130
>UniRef100_Q75L70 Putative polyprotein [Oryza sativa]
Length = 1084
Score = 108 bits (270), Expect = 2e-23
Identities = 60/144 (41%), Positives = 85/144 (58%), Gaps = 36/144 (25%)
Query: 1 MANNASTNI-LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAA 59
MA A++N LRS+IEKEKLT TNF+DW
Sbjct: 15 MAAPAASNFNLRSIIEKEKLTGTNFMDWE------------------------------- 43
Query: 60 LRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSK 119
H K ND +++SC+MLA+M+P+LQ+Q+E + A +I L+ + E+QAR ER + SK
Sbjct: 44 ----HEKRCNDYLDISCLMLATMSPKLQRQYEALDAHTIITGLRNMSEDQARAERSNTSK 99
Query: 120 ALFSTKLSEGGPVGPHVLKMIGYS 143
+LF+ +L+EG PV PHV+KMIGY+
Sbjct: 100 SLFACRLAEGNPVSPHVIKMIGYT 123
>UniRef100_Q7XMT3 OSJNBa0029L02.4 protein [Oryza sativa]
Length = 501
Score = 99.8 bits (247), Expect = 1e-20
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 1 MANNASTNI-LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAA 59
MA A +N LRS++EKEKL TNF+DW RN+RIVL E+K +VL P P P A AA
Sbjct: 41 MAAPAPSNFNLRSILEKEKLIGTNFMDWYRNLRIVLRQEQKEFVLTEPFPANLPNNAPAA 100
Query: 60 LRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHL 102
R H K ND +++SC++LA+M+PELQ+Q+E + A +I L
Sbjct: 101 QRREHEKRCNDYLDISCLILATMSPELQRQYEALDAHTIITGL 143
>UniRef100_Q84R90 Putative polyprotein [Oryza sativa]
Length = 657
Score = 89.7 bits (221), Expect = 1e-17
Identities = 49/117 (41%), Positives = 74/117 (62%), Gaps = 1/117 (0%)
Query: 1 MANNASTNI-LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAA 59
M +A++N L +++KE L TNF+D RN+RIVL E K +VL P P P A AA
Sbjct: 1 MVASATSNFNLWFILKKENLNGTNFMDCYRNLRIVLRQEHKEFVLAQPFPADLPNNAPAA 60
Query: 60 LRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFD 116
R H K N +++S +MLA+M+PELQ+Q+E + + +I L+ ++E+QAR E +
Sbjct: 61 QRMEHEKRCNVYLDISYLMLATMSPELQRQYEALDSHTIITGLRNMFEDQARTESLE 117
>UniRef100_Q60D50 Putative polyprotein [Solanum demissum]
Length = 703
Score = 86.7 bits (213), Expect = 1e-16
Identities = 48/135 (35%), Positives = 79/135 (57%), Gaps = 1/135 (0%)
Query: 8 NILRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKH 67
N + +++++ KL +N++DW R + IVLT E+ +VL P P +S + A+ K
Sbjct: 5 NPISTILDQNKLEGSNYVDWRRILDIVLTAEEYKFVLHEECPLKPNEQSSDEDKLAYQKW 64
Query: 68 LNDSVEVSCIMLASMTPELQKQHEGM-TAFDMIEHLKTLYEEQARHERFDVSKALFSTKL 126
C ++ASM+ LQ QH+ M +AF+ +E+LK ++ +Q + + + L +TK+
Sbjct: 65 RKADEMARCYIMASMSNVLQHQHQAMLSAFEFLENLKQMFGDQGQSAKQIAMRTLMNTKM 124
Query: 127 SEGGPVGPHVLKMIG 141
EG PV HVLKMIG
Sbjct: 125 VEGTPVRDHVLKMIG 139
>UniRef100_Q9S9A8 BARE-1 polyprotein [Hordeum vulgare]
Length = 1296
Score = 86.7 bits (213), Expect = 1e-16
Identities = 49/146 (33%), Positives = 81/146 (54%), Gaps = 3/146 (2%)
Query: 1 MANNASTNILRSLIEKEKLTE--TNFIDWSRNM-RIVLTHEKKLYVLDGPIPEAPPAGAS 57
MA+ T + +EK KL + +NF+DW+ N+ +++L KK YVL+ + + PPA A
Sbjct: 1 MAHARVTLNFNTFLEKAKLKDDGSNFVDWAHNLIKLLLQAGKKDYVLNRALGDEPPATAD 60
Query: 58 AALRNAHAKHLNDSVEVSCIMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDV 117
++NA D V +L + P LQ++ E A++M + LK ++++ R ER++
Sbjct: 61 QDVKNAWLTRKEDYSVVQRAVLYGLEPGLQRRFERHGAYEMFQELKFIFQKNTRIERYET 120
Query: 118 SKALFSTKLSEGGPVGPHVLKMIGYS 143
++ K+ E V HVLKM GYS
Sbjct: 121 FDKFYACKMEENSSVSEHVLKMAGYS 146
>UniRef100_Q7X7F2 OSJNBa0023J03.14 protein [Oryza sativa]
Length = 704
Score = 58.5 bits (140), Expect = 3e-08
Identities = 34/80 (42%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 10 LRSLIEKEKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHL- 68
LRS++EKEKL TNF+DW N+RIVL E K +VL P P P A A H K
Sbjct: 11 LRSILEKEKLIVTNFMDWYHNLRIVLRQEHKEFVLTEPFPADLPNNALVAQHREHEKLAE 70
Query: 69 NDSVEVSCIMLASMTPELQK 88
+ V + I + T L K
Sbjct: 71 GNPVSLHVIKMIGYTESLDK 90
>UniRef100_Q6UUI9 Putative polyprotein [Oryza sativa]
Length = 390
Score = 55.8 bits (133), Expect = 2e-07
Identities = 23/39 (58%), Positives = 33/39 (83%)
Query: 105 LYEEQARHERFDVSKALFSTKLSEGGPVGPHVLKMIGYS 143
++E+QAR ERF+ SK+LF+ +L+EG PV PH +KMIGY+
Sbjct: 1 MFEDQARAERFNTSKSLFACRLAEGNPVSPHEIKMIGYT 39
>UniRef100_Q7Q8Q2 ENSANGP00000017936 [Anopheles gambiae str. PEST]
Length = 268
Score = 45.8 bits (107), Expect = 2e-04
Identities = 33/123 (26%), Positives = 57/123 (45%), Gaps = 8/123 (6%)
Query: 17 EKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLNDSVEVSC 76
EKL + NF+ W M + LT EK + + P P A+ + R+ A+H+
Sbjct: 7 EKLNDQNFVIWKFKMELKLTKEKLIKTVKEPKPTEEKEMAAWSERDGEARHM-------- 58
Query: 77 IMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEGGPVGPHV 136
I LA +L TA +M + L ++E ++ + V + + S KL E G + H+
Sbjct: 59 IGLAVENDQLVHICRKTTAKEMWDTLMGIHEVESMNTMMTVMRKMCSLKLPEDGNLPEHL 118
Query: 137 LKM 139
++
Sbjct: 119 KQL 121
>UniRef100_Q7Q8Q3 ENSANGP00000017908 [Anopheles gambiae str. PEST]
Length = 268
Score = 42.0 bits (97), Expect = 0.003
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 17 EKLTETNFIDWSRNMRIVLTHEKKLYVLDGPIPEAPPAGASAALRNAHAKHLNDSVEVSC 76
EKL + NF+ W M + LT EK + + P A+ + R+ A+H+
Sbjct: 7 EKLNDQNFVIWKFKMELKLTKEKLINTVKELKPTEEKEMAAWSERDGEARHM-------- 58
Query: 77 IMLASMTPELQKQHEGMTAFDMIEHLKTLYEEQARHERFDVSKALFSTKLSEGGPVGPHV 136
I LA +L TA +M + L ++E ++ + V + + S KL E G + H+
Sbjct: 59 IGLAVENDQLVHICRKTTAKEMWDTLMGIHEVESMNTMMTVMRKMCSLKLPEDGNLPEHL 118
Query: 137 LKM 139
++
Sbjct: 119 KQL 121
>UniRef100_Q6PCE9 MGC69174 protein [Xenopus laevis]
Length = 600
Score = 37.7 bits (86), Expect = 0.054
Identities = 34/110 (30%), Positives = 50/110 (44%), Gaps = 6/110 (5%)
Query: 5 ASTNILRSLI-EKEKLTETNFIDWSRNMRIVLTHEKKLYV---LDGPIPEAPPAGASAAL 60
AS N+LR LI ++ +T W+ RI + K L++ + EA AS
Sbjct: 475 ASLNLLRYLIIRQDNEVDTKTAVWTELGRIENNYLKPLHIGLNMSKAHYEAEMKSASEKK 534
Query: 61 RNAHAKHLNDSVEVSCIMLASMTPELQKQ--HEGMTAFDMIEHLKTLYEE 108
+ H+K SV V L MTPE+Q Q + FD++E + EE
Sbjct: 535 KGLHSKKAICSVTVGENKLPDMTPEIQLQVLRSALFTFDLMESVLARVEE 584
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.316 0.130 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 231,343,890
Number of Sequences: 2790947
Number of extensions: 8407890
Number of successful extensions: 26709
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 26658
Number of HSP's gapped (non-prelim): 83
length of query: 143
length of database: 848,049,833
effective HSP length: 119
effective length of query: 24
effective length of database: 515,927,140
effective search space: 12382251360
effective search space used: 12382251360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC141110.1