BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC140913.1 - phase: 0 /pseudo
         (695 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_O04238 Transcription factor [Vicia faba]                    169  3e-40
UniRef100_Q9FFS2 Transcription factor-like protein [Arabidopsis ...    81  9e-14
UniRef100_Q5VRS8 Putative transcription factor [Oryza sativa]          62  8e-08
UniRef100_UPI000030C5A4 UPI000030C5A4 UniRef100 entry                  38  0.89

>UniRef100_O04238 Transcription factor [Vicia faba]
          Length = 828

 Score =  169 bits (428), Expect = 3e-40
 Identities = 89/112 (79%), Positives = 95/112 (84%), Gaps = 2/112 (1%)

Query: 1   METNTSSPLSTLPESGAMTATANPVSPSLVNLYRITKVLERLATHFVPGNRSDAFEFFNL 60
           ME+NTSS +   P+  A   T NPVSPSLVNLYRITKVL+RLA HF PGNRSD+FEFFNL
Sbjct: 1   MESNTSSSMP--PDLAATNGTTNPVSPSLVNLYRITKVLDRLAFHFQPGNRSDSFEFFNL 58

Query: 61  CLSLSRGIDYALANGEVPLKANELPILMKQMYQRKTDDHSQAAVMVLMISVK 112
           CLSLSRGIDYALANGE P KANELP LMKQMYQRKTD+ S AAVMVLMISVK
Sbjct: 59  CLSLSRGIDYALANGEPPPKANELPTLMKQMYQRKTDELSLAAVMVLMISVK 110


>UniRef100_Q9FFS2 Transcription factor-like protein [Arabidopsis thaliana]
          Length = 719

 Score = 81.3 bits (199), Expect = 9e-14
 Identities = 41/96 (42%), Positives = 60/96 (61%)

Query: 17  AMTATANPVSPSLVNLYRITKVLERLATHFVPGNRSDAFEFFNLCLSLSRGIDYALANGE 76
           A T      + SLVN +R+  V +RL  H   G + D  EF   C+S ++GID+A+AN +
Sbjct: 11  AGTGLREKTAASLVNSFRLASVTQRLRYHIQDGAKVDPKEFQICCISFAKGIDFAIANND 70

Query: 77  VPLKANELPILMKQMYQRKTDDHSQAAVMVLMISVK 112
           +P K  E P L+KQ+ +  TD +++ A+MVLMISVK
Sbjct: 71  IPKKVEEFPWLLKQLCRHGTDVYTKTALMVLMISVK 106


>UniRef100_Q5VRS8 Putative transcription factor [Oryza sativa]
          Length = 872

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 33/85 (38%), Positives = 55/85 (63%), Gaps = 2/85 (2%)

Query: 30  VNLYRITKVLERLATHFVPGNRS--DAFEFFNLCLSLSRGIDYALANGEVPLKANELPIL 87
           +N  R+  + +RL THF  G  +  +  +  +L  + +RGID+AL++G+VP  A+E+P +
Sbjct: 34  MNARRLVMIGDRLRTHFRGGGGTVLEPPDLAHLVYAFARGIDFALSSGDVPTVASEIPSI 93

Query: 88  MKQMYQRKTDDHSQAAVMVLMISVK 112
           +K++Y    D   Q++VMVLMIS K
Sbjct: 94  LKKVYLVGKDQFLQSSVMVLMISCK 118


>UniRef100_UPI000030C5A4 UPI000030C5A4 UniRef100 entry
          Length = 255

 Score = 38.1 bits (87), Expect = 0.89
 Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 3/72 (4%)

Query: 232 FIQGPTFEWILDHRCPPV*LVSLNLGQIFFKLWVSSMGIILYLLPI*VLDPCLRIQFFHQ 291
           FI    +++IL+ +   + ++SL+L  I   LW  + GI+ +L+ I  ++   +I F H+
Sbjct: 113 FISLIIYDYILEKKFTDLFIISLSLNLI---LWTKAEGIVYFLIIISCINLIKKINFSHR 169

Query: 292 IMFSLLYLLMQI 303
           I+F++L L + I
Sbjct: 170 IIFNILCLSLII 181


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.357    0.160    0.557 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 949,168,530
Number of Sequences: 2790947
Number of extensions: 33250341
Number of successful extensions: 142958
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 142953
Number of HSP's gapped (non-prelim): 5
length of query: 695
length of database: 848,049,833
effective HSP length: 134
effective length of query: 561
effective length of database: 474,062,935
effective search space: 265949306535
effective search space used: 265949306535
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 78 (34.7 bits)