BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140721.8 + phase: 0 /pseudo
(59 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9FYY2 Germin D [Hordeum vulgare] 50 2e-05
UniRef100_Q9FL89 Germin-like protein subfamily 1 member 19 precu... 48 6e-05
UniRef100_Q9FIC6 Germin-like protein subfamily 1 member 17 precu... 48 6e-05
UniRef100_P92997 Germin-like protein subfamily 1 member 13 precu... 48 8e-05
UniRef100_Q9FIC9 Germin-like protein subfamily 1 member 15 precu... 47 1e-04
UniRef100_O48997 Germin-like protein 1 [Oryza sativa] 47 1e-04
UniRef100_Q93WX8 Germin-like protein [Musa acuminata] 45 6e-04
UniRef100_Q9SFF9 Germin-like protein subfamily 1 member 7 precur... 44 8e-04
UniRef100_Q9FID0 Germin-like protein subfamily 1 member 14 precu... 44 0.001
UniRef100_Q9LD27 Oxalate oxidase [Triticum aestivum] 44 0.001
UniRef100_Q9M8X4 Germin-like protein subfamily 1 member 4 precur... 43 0.002
UniRef100_P92996 Germin-like protein subfamily 1 member 20 precu... 42 0.003
UniRef100_P92999 Germin-like protein subfamily 1 member 18 precu... 42 0.003
UniRef100_Q9FIC8 Germin-like protein subfamily 1 member 16 precu... 42 0.003
UniRef100_Q9FYY4 Germin B [Hordeum vulgare] 42 0.004
UniRef100_Q9M8X6 Germin-like protein subfamily 1 member 6 precur... 42 0.004
UniRef100_Q9ST00 Germin-like protein [Atriplex lentiformis] 42 0.005
UniRef100_O48998 Germin-like protein 2 [Oryza sativa] 41 0.007
UniRef100_Q9FYY3 Germin F [Hordeum vulgare] 41 0.007
UniRef100_Q9FMA6 Putative germin-like protein subfamily 1 member... 41 0.007
>UniRef100_Q9FYY2 Germin D [Hordeum vulgare]
Length = 225
Score = 49.7 bits (117), Expect = 2e-05
Identities = 25/38 (65%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Query: 3 ILYLLVSILALASSIAFAYDPSPLQDFCVA-IKDPKDG 39
+LYLL +LALAS A AYDPSPLQDFC+A +K P +G
Sbjct: 7 LLYLLTGLLALASWHATAYDPSPLQDFCIADMKSPVNG 44
>UniRef100_Q9FL89 Germin-like protein subfamily 1 member 19 precursor [Arabidopsis
thaliana]
Length = 221
Score = 48.1 bits (113), Expect = 6e-05
Identities = 23/34 (67%), Positives = 29/34 (84%), Gaps = 1/34 (2%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L+++ AL + IA AYDPSPLQDFCVAI DPK+G
Sbjct: 8 ILITLSALVT-IAKAYDPSPLQDFCVAIDDPKNG 40
>UniRef100_Q9FIC6 Germin-like protein subfamily 1 member 17 precursor [Arabidopsis
thaliana]
Length = 221
Score = 48.1 bits (113), Expect = 6e-05
Identities = 23/34 (67%), Positives = 29/34 (84%), Gaps = 1/34 (2%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L+++ AL + IA AYDPSPLQDFCVAI DPK+G
Sbjct: 8 ILITLSALVT-IAKAYDPSPLQDFCVAIDDPKNG 40
>UniRef100_P92997 Germin-like protein subfamily 1 member 13 precursor [Arabidopsis
thaliana]
Length = 222
Score = 47.8 bits (112), Expect = 8e-05
Identities = 22/34 (64%), Positives = 27/34 (78%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L+++ AL S A AYDPSPLQDFCVAI D K+G
Sbjct: 8 ILITLSALVISFAEAYDPSPLQDFCVAIDDLKNG 41
>UniRef100_Q9FIC9 Germin-like protein subfamily 1 member 15 precursor [Arabidopsis
thaliana]
Length = 221
Score = 47.4 bits (111), Expect = 1e-04
Identities = 23/34 (67%), Positives = 28/34 (81%), Gaps = 1/34 (2%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L++ AL + IA AYDPSPLQDFCVAI DPK+G
Sbjct: 8 ILITFWALVT-IAKAYDPSPLQDFCVAIDDPKNG 40
>UniRef100_O48997 Germin-like protein 1 [Oryza sativa]
Length = 224
Score = 47.0 bits (110), Expect = 1e-04
Identities = 24/34 (70%), Positives = 28/34 (81%), Gaps = 1/34 (2%)
Query: 4 LYLLVSILALASSIAFAYDPSPLQDFCVA-IKDP 36
LYLL ++LALAS A A+DPSPLQDFCVA +K P
Sbjct: 7 LYLLAALLALASWQAIAFDPSPLQDFCVADMKSP 40
>UniRef100_Q93WX8 Germin-like protein [Musa acuminata]
Length = 229
Score = 44.7 bits (104), Expect = 6e-04
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKD 35
L+ ++LALASS A A+DPSPLQDFCVA D
Sbjct: 7 LIAALLALASSHALAFDPSPLQDFCVADYD 36
>UniRef100_Q9SFF9 Germin-like protein subfamily 1 member 7 precursor [Arabidopsis
thaliana]
Length = 229
Score = 44.3 bits (103), Expect = 8e-04
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 1 MKILYLLVSILALASSIAFAYDPSPLQDFCVAIKD 35
++ L +LALASS YDPSPLQDFCVA+ D
Sbjct: 5 LRFLVAKAILLALASSFVSCYDPSPLQDFCVAVDD 39
>UniRef100_Q9FID0 Germin-like protein subfamily 1 member 14 precursor [Arabidopsis
thaliana]
Length = 222
Score = 43.9 bits (102), Expect = 0.001
Identities = 21/34 (61%), Positives = 26/34 (75%)
Query: 6 LLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
+L+++ AL S A A DPSPLQDFCVAI D K+G
Sbjct: 8 ILITLSALVISFAEANDPSPLQDFCVAIGDLKNG 41
>UniRef100_Q9LD27 Oxalate oxidase [Triticum aestivum]
Length = 221
Score = 43.5 bits (101), Expect = 0.001
Identities = 23/34 (67%), Positives = 26/34 (75%), Gaps = 1/34 (2%)
Query: 4 LYLLVSILALASSIAFAYDPSPLQDFCVA-IKDP 36
L+LL +LAL S A AYDPSPLQDFCVA +K P
Sbjct: 2 LFLLAVLLALVSWQATAYDPSPLQDFCVADMKSP 35
>UniRef100_Q9M8X4 Germin-like protein subfamily 1 member 4 precursor [Arabidopsis
thaliana]
Length = 222
Score = 43.1 bits (100), Expect = 0.002
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MKILYLLVSILALASSIAFAYDPSPLQDFCVAIKD 35
++ L + +LALASS + YDPSPLQD+CVA +
Sbjct: 5 LQFLLAKIILLALASSFVYCYDPSPLQDYCVATNE 39
>UniRef100_P92996 Germin-like protein subfamily 1 member 20 precursor [Arabidopsis
thaliana]
Length = 222
Score = 42.4 bits (98), Expect = 0.003
Identities = 20/29 (68%), Positives = 22/29 (74%)
Query: 9 SILALASSIAFAYDPSPLQDFCVAIKDPK 37
+I+AL S AYDPSPLQDFCVAI D K
Sbjct: 11 AIIALVLSFVNAYDPSPLQDFCVAIDDLK 39
>UniRef100_P92999 Germin-like protein subfamily 1 member 18 precursor [Arabidopsis
thaliana]
Length = 222
Score = 42.4 bits (98), Expect = 0.003
Identities = 20/29 (68%), Positives = 22/29 (74%)
Query: 9 SILALASSIAFAYDPSPLQDFCVAIKDPK 37
+I+AL S AYDPSPLQDFCVAI D K
Sbjct: 11 AIIALVLSFVNAYDPSPLQDFCVAIDDLK 39
>UniRef100_Q9FIC8 Germin-like protein subfamily 1 member 16 precursor [Arabidopsis
thaliana]
Length = 222
Score = 42.4 bits (98), Expect = 0.003
Identities = 20/29 (68%), Positives = 22/29 (74%)
Query: 9 SILALASSIAFAYDPSPLQDFCVAIKDPK 37
+I+AL S AYDPSPLQDFCVAI D K
Sbjct: 11 AIIALVLSFVNAYDPSPLQDFCVAIDDLK 39
>UniRef100_Q9FYY4 Germin B [Hordeum vulgare]
Length = 226
Score = 42.0 bits (97), Expect = 0.004
Identities = 19/29 (65%), Positives = 23/29 (78%)
Query: 4 LYLLVSILALASSIAFAYDPSPLQDFCVA 32
L+ L ++L LAS A AYDPSPLQDFC+A
Sbjct: 7 LFCLSALLVLASRQATAYDPSPLQDFCIA 35
>UniRef100_Q9M8X6 Germin-like protein subfamily 1 member 6 precursor [Arabidopsis
thaliana]
Length = 227
Score = 42.0 bits (97), Expect = 0.004
Identities = 23/59 (38%), Positives = 32/59 (53%), Gaps = 13/59 (22%)
Query: 1 MKILYLLVSILALASSIAFAYDPSPLQDFCVA-------------IKDPKDGDYSDLTH 46
+++L V +LALA+S YDP+PLQDFCVA KDPK +D ++
Sbjct: 6 LRLLVTQVILLALATSFVSCYDPNPLQDFCVAASETNRVFVNGKFCKDPKSVTANDFSY 64
>UniRef100_Q9ST00 Germin-like protein [Atriplex lentiformis]
Length = 224
Score = 41.6 bits (96), Expect = 0.005
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 2 KILYLLVSILALASSIAFAYDPSPLQDFCVAIKDPKDG 39
KIL L +LA+A+ +A+A DPS LQDFCV + +P DG
Sbjct: 5 KILSCLC-LLAVANYVAYASDPSQLQDFCVGVTNPIDG 41
>UniRef100_O48998 Germin-like protein 2 [Oryza sativa]
Length = 225
Score = 41.2 bits (95), Expect = 0.007
Identities = 21/30 (70%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Query: 4 LYLLVSILALAS-SIAFAYDPSPLQDFCVA 32
L+LL S+L LAS A A+DPSPLQDFCVA
Sbjct: 6 LFLLASLLVLASWQQAIAFDPSPLQDFCVA 35
>UniRef100_Q9FYY3 Germin F [Hordeum vulgare]
Length = 226
Score = 41.2 bits (95), Expect = 0.007
Identities = 19/29 (65%), Positives = 23/29 (78%)
Query: 4 LYLLVSILALASSIAFAYDPSPLQDFCVA 32
L+ L ++L LAS A AYDPSPLQDFC+A
Sbjct: 7 LFCLSALLVLASWQATAYDPSPLQDFCIA 35
>UniRef100_Q9FMA6 Putative germin-like protein subfamily 1 member 12 precursor
[Arabidopsis thaliana]
Length = 223
Score = 41.2 bits (95), Expect = 0.007
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 1 MKILYLLVSILALASSIAFAY--DPSPLQDFCVAIKDP 36
MK LYL + L AS++ FA DPSPLQDFC+ + P
Sbjct: 3 MKNLYLAILYLLAASTLPFAIASDPSPLQDFCIGVNTP 40
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.328 0.145 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,312,828
Number of Sequences: 2790947
Number of extensions: 2808081
Number of successful extensions: 7761
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7704
Number of HSP's gapped (non-prelim): 67
length of query: 59
length of database: 848,049,833
effective HSP length: 35
effective length of query: 24
effective length of database: 750,366,688
effective search space: 18008800512
effective search space used: 18008800512
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC140721.8