BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140721.12 - phase: 0
(109 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9LTU4 Helicase-like protein [Arabidopsis thaliana] 93 1e-18
UniRef100_Q9LX60 Hypothetical protein F4M19_60 [Arabidopsis thal... 90 1e-17
UniRef100_Q9SI21 Putative helicase [Arabidopsis thaliana] 89 2e-17
UniRef100_Q9SH75 Putative helicase [Arabidopsis thaliana] 89 3e-17
UniRef100_Q9M3F4 Hypothetical protein T14K23_130 [Arabidopsis th... 88 5e-17
UniRef100_Q9ZQ61 Putative helicase [Arabidopsis thaliana] 87 9e-17
UniRef100_Q9C925 Hypothetical protein F14G24.23 [Arabidopsis tha... 86 2e-16
UniRef100_Q9C7W5 Hypothetical protein F15H21.18 [Arabidopsis tha... 86 3e-16
UniRef100_Q9ZQR0 Putative helicase [Arabidopsis thaliana] 85 5e-16
UniRef100_Q8RV60 Hypothetical protein At2g05640 [Arabidopsis tha... 84 1e-15
UniRef100_Q9LIZ9 Similar to Arabidopsis thaliana chromosome II B... 78 6e-14
UniRef100_Q9FHV5 Helicase [Arabidopsis thaliana] 78 6e-14
UniRef100_Q6UU02 Hypothetical protein [Oryza sativa] 75 5e-13
UniRef100_Q5VR06 Helicase-like protein [Oryza sativa] 74 8e-13
UniRef100_Q8H7K8 Putative helicase [Oryza sativa] 74 8e-13
UniRef100_Q7XNY8 OSJNBb0015N08.3 protein [Oryza sativa] 74 8e-13
UniRef100_Q9C8B0 Hypothetical protein F10O5.11 [Arabidopsis thal... 72 4e-12
UniRef100_Q6AUR0 Hypothetical protein OSJNBa0077L08.8 [Oryza sat... 70 9e-12
UniRef100_Q7XW15 OSJNBb0013O03.3 protein [Oryza sativa] 70 2e-11
UniRef100_Q94LS7 Putative helicase [Oryza sativa] 69 3e-11
>UniRef100_Q9LTU4 Helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 93.2 bits (230), Expect = 1e-18
Identities = 47/84 (55%), Positives = 61/84 (71%), Gaps = 1/84 (1%)
Query: 13 TNKLIVDELNYN-KDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTG 71
+N+LI+DEL YN + +L K +D + LT EQR ++D+I ++ D GG FF+YG+GGTG
Sbjct: 922 SNRLIIDELRYNNQSDLKKKHSDWIQKLTPEQRGIYDQITNAVFNDLGGVFFVYGFGGTG 981
Query: 72 KTFIWKTSLAVVRSKGLIVLNAAS 95
KTFIWKT A VRSKG I LN AS
Sbjct: 982 KTFIWKTLAAAVRSKGQICLNVAS 1005
>UniRef100_Q9LX60 Hypothetical protein F4M19_60 [Arabidopsis thaliana]
Length = 1752
Score = 89.7 bits (221), Expect = 1e-17
Identities = 47/84 (55%), Positives = 58/84 (68%), Gaps = 1/84 (1%)
Query: 13 TNKLIVDELNYNKDELTKTQTD-MLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTG 71
+N+L+VDEL YN D K + D ML EQR ++D+I + D GG FF+YG+GGTG
Sbjct: 1245 SNRLVVDELRYNIDSNLKEKHDEWFQMLNTEQRGIYDEITGAVFNDLGGVFFIYGFGGTG 1304
Query: 72 KTFIWKTSLAVVRSKGLIVLNAAS 95
KTFIWKT A VRS+G IVLN AS
Sbjct: 1305 KTFIWKTLAAAVRSRGQIVLNVAS 1328
>UniRef100_Q9SI21 Putative helicase [Arabidopsis thaliana]
Length = 1219
Score = 89.4 bits (220), Expect = 2e-17
Identities = 44/83 (53%), Positives = 58/83 (69%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI+DE Y+++ TK D + LT EQ+ V+D I+ + + GG FF+YG+GGTGK
Sbjct: 721 TNVLILDEKGYDRESETKKHADSIKKLTLEQKSVYDNIIGAVNENVGGVFFVYGFGGTGK 780
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+WKT A +RSKG IVLN AS
Sbjct: 781 TFLWKTLSAALRSKGDIVLNVAS 803
>UniRef100_Q9SH75 Putative helicase [Arabidopsis thaliana]
Length = 1241
Score = 88.6 bits (218), Expect = 3e-17
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
MP+P T + +N+ I +E NYN ++L + D +T EQ+ ++D+IM + + GG
Sbjct: 810 MPKP-TKEGTDHSNRFITEEKNYNVEKLKEDHDDWFNKMTSEQKEIYDEIMKAVLENSGG 868
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YG+GGTGKTF+WKT A VR KGLI +N AS
Sbjct: 869 IFFVYGFGGTGKTFMWKTLSAAVRMKGLISVNVAS 903
>UniRef100_Q9M3F4 Hypothetical protein T14K23_130 [Arabidopsis thaliana]
Length = 1018
Score = 87.8 bits (216), Expect = 5e-17
Identities = 44/83 (53%), Positives = 59/83 (71%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
+N+LIVDE+ Y++ LT + + MLT E+R V+D+I + D GG FF+YG+GGT K
Sbjct: 639 SNRLIVDEMRYDRQYLTGKHAEWIDMLTPEKRGVYDEITGAVFKDLGGVFFVYGFGGTRK 698
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TFIWKT A +RS+G IVLN AS
Sbjct: 699 TFIWKTLSAAIRSRGDIVLNVAS 721
>UniRef100_Q9ZQ61 Putative helicase [Arabidopsis thaliana]
Length = 1230
Score = 87.0 bits (214), Expect = 9e-17
Identities = 47/89 (52%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 8 DMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCV-HDKIMDSKGFDDGGFFFLYG 66
D P F N LI+DE NYN++ L K + L LT E + V HD+IMD D GG FFLY
Sbjct: 789 DEPAF-NPLIIDERNYNRESLKKKHDNWLKTLTPEHKKVYHDEIMDDVLNDKGGVFFLYA 847
Query: 67 YGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
+GGTGKTF+WK A +R KG LN AS
Sbjct: 848 FGGTGKTFLWKVLSAAIRCKGDTCLNVAS 876
>UniRef100_Q9C925 Hypothetical protein F14G24.23 [Arabidopsis thaliana]
Length = 996
Score = 85.9 bits (211), Expect = 2e-16
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 14 NKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGKT 73
N I+DE Y++ L + + L M+T EQ+ ++D+IMD+ D GG FF+YG+GGTGKT
Sbjct: 519 NHFILDERKYDRAYLIEKHEEWLTMVTSEQKKIYDEIMDAVLHDRGGVFFVYGFGGTGKT 578
Query: 74 FIWKTSLAVVRSKGLIVLNAAS 95
F+WK A +RSKG I LN AS
Sbjct: 579 FLWKLLSAAIRSKGDISLNVAS 600
>UniRef100_Q9C7W5 Hypothetical protein F15H21.18 [Arabidopsis thaliana]
Length = 753
Score = 85.5 bits (210), Expect = 3e-16
Identities = 42/82 (51%), Positives = 56/82 (68%)
Query: 14 NKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGKT 73
N I+DE Y++ LT+ + L M+T EQ+ ++D+IMD D GG FF+YG+GGTGKT
Sbjct: 497 NHFILDERKYDRAYLTEKHEEWLTMVTLEQKKIYDEIMDVVLHDRGGVFFVYGFGGTGKT 556
Query: 74 FIWKTSLAVVRSKGLIVLNAAS 95
F+WK A +RSKG I LN AS
Sbjct: 557 FLWKLLSAAIRSKGDISLNVAS 578
>UniRef100_Q9ZQR0 Putative helicase [Arabidopsis thaliana]
Length = 1265
Score = 84.7 bits (208), Expect = 5e-16
Identities = 47/95 (49%), Positives = 65/95 (67%), Gaps = 2/95 (2%)
Query: 2 PRPNTIDMPTFTNKLIVDELNYNKDE-LTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
P+P TID +N+LIV+EL YN++ L + + MLT EQR V+++I ++ + GG
Sbjct: 765 PKP-TIDGIDNSNRLIVEELRYNRESNLKEKHEEWKQMLTPEQRGVYNEITEAVFNNLGG 823
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YG+GGTGKTFIWKT A +R + IVLN AS
Sbjct: 824 VFFVYGFGGTGKTFIWKTLSATIRYRDQIVLNVAS 858
>UniRef100_Q8RV60 Hypothetical protein At2g05640 [Arabidopsis thaliana]
Length = 1308
Score = 83.6 bits (205), Expect = 1e-15
Identities = 41/95 (43%), Positives = 59/95 (61%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
MP P + P N LI DEL Y++ + + LT EQR ++D+I+++ + GG
Sbjct: 789 MPYPENNNFPAAMNTLIQDELCYDRHACAQDHLRLFSKLTVEQRKIYDQIIEAVYSNSGG 848
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+ G+GGTGKT++WKT +RS+G IVLN AS
Sbjct: 849 VFFVNGFGGTGKTYLWKTLSTYIRSRGEIVLNVAS 883
>UniRef100_Q9LIZ9 Similar to Arabidopsis thaliana chromosome II BAC T13P21 [Oryza
sativa]
Length = 1270
Score = 77.8 bits (190), Expect = 6e-14
Identities = 39/95 (41%), Positives = 56/95 (58%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
+P P N+L++DE Y+ ++++ D L L QR ++D I++S D G
Sbjct: 753 LPEPTIQSTSILGNRLLIDEQAYDLEKISIEAADQLGKLNLNQRHIYDAILNSLNSDIGH 812
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YGYGGTGKTF+W T L VR++G I L AS
Sbjct: 813 TFFIYGYGGTGKTFLWNTLLNSVRAEGKIALAVAS 847
>UniRef100_Q9FHV5 Helicase [Arabidopsis thaliana]
Length = 1523
Score = 77.8 bits (190), Expect = 6e-14
Identities = 39/83 (46%), Positives = 55/83 (65%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI+DE Y++D LT+ + MLT EQ+ ++D I+ + + G F+YG+GGTGK
Sbjct: 1043 TNVLILDEKGYDRDNLTEKHAKWIKMLTPEQKSIYDDIIGAVNENVGVVVFVYGFGGTGK 1102
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+ KT +RSKG IVLN +S
Sbjct: 1103 TFLSKTLSVALRSKGDIVLNVSS 1125
>UniRef100_Q6UU02 Hypothetical protein [Oryza sativa]
Length = 858
Score = 74.7 bits (182), Expect = 5e-13
Identities = 38/95 (40%), Positives = 55/95 (57%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
+P P N+L++DE Y+ ++++ D L L QR ++D I++S D G
Sbjct: 551 LPEPTIQSTSILGNRLLIDEQAYDLEKISIEAADQLGKLNLNQRHIYDAILNSLNSDIGH 610
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YGYGGTGKTF+W T L VR++ I L AS
Sbjct: 611 TFFIYGYGGTGKTFLWNTLLNSVRAERKIALAVAS 645
>UniRef100_Q5VR06 Helicase-like protein [Oryza sativa]
Length = 1427
Score = 73.9 bits (180), Expect = 8e-13
Identities = 37/83 (44%), Positives = 53/83 (63%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI DELNYN ++L + + L L D+Q+ I++S + FFF+ G+GGTGK
Sbjct: 910 TNTLIQDELNYNANDLEEQANKLYLQLNDDQKKAFHLIVNSVINKESNFFFVSGHGGTGK 969
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+W T ++ +R+K IVL AS
Sbjct: 970 TFLWNTIVSFLRAKKEIVLTVAS 992
>UniRef100_Q8H7K8 Putative helicase [Oryza sativa]
Length = 764
Score = 73.9 bits (180), Expect = 8e-13
Identities = 37/83 (44%), Positives = 53/83 (63%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI DELNYN ++L + + L L D+Q+ I++S + FFF+ G+GGTGK
Sbjct: 61 TNTLIQDELNYNANDLEEQANKLYLQLNDDQKKAFHLIVNSVINKESNFFFVSGHGGTGK 120
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+W T ++ +R+K IVL AS
Sbjct: 121 TFLWNTIVSFLRAKKEIVLTVAS 143
>UniRef100_Q7XNY8 OSJNBb0015N08.3 protein [Oryza sativa]
Length = 696
Score = 73.9 bits (180), Expect = 8e-13
Identities = 37/83 (44%), Positives = 53/83 (63%)
Query: 13 TNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGK 72
TN LI DELNYN ++L + + L L D+Q+ I++S + FFF+ G+GGTGK
Sbjct: 61 TNTLIQDELNYNANDLEEQANKLYLQLNDDQKKAFHLIVNSVINKESNFFFVSGHGGTGK 120
Query: 73 TFIWKTSLAVVRSKGLIVLNAAS 95
TF+W T ++ +R+K IVL AS
Sbjct: 121 TFLWNTIVSFLRAKKEIVLTVAS 143
>UniRef100_Q9C8B0 Hypothetical protein F10O5.11 [Arabidopsis thaliana]
Length = 1678
Score = 71.6 bits (174), Expect = 4e-12
Identities = 38/71 (53%), Positives = 49/71 (68%), Gaps = 1/71 (1%)
Query: 26 DELTK-TQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFFLYGYGGTGKTFIWKTSLAVVR 84
DE K T+ + MLT EQR V++ I ++ + GG FF+YG+GGTGKTFIWKT A +R
Sbjct: 1217 DEFPKPTRDEWKQMLTPEQRGVYNAITEAVFNNLGGVFFVYGFGGTGKTFIWKTLSAAIR 1276
Query: 85 SKGLIVLNAAS 95
+G IVLN AS
Sbjct: 1277 CRGQIVLNVAS 1287
>UniRef100_Q6AUR0 Hypothetical protein OSJNBa0077L08.8 [Oryza sativa]
Length = 807
Score = 70.5 bits (171), Expect = 9e-12
Identities = 38/95 (40%), Positives = 57/95 (60%)
Query: 1 MPRPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGG 60
+P P+ I N+LI+DEL+Y+ + T + + L + Q+ V + I +S ++G
Sbjct: 278 LPLPDDIGSVLAQNRLILDELSYDVYNMPSTIDEAISGLNNSQKEVFNAIYNSAINNEGR 337
Query: 61 FFFLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
FF+YGYGGT KTF+W T L +RS+G I L AS
Sbjct: 338 TFFVYGYGGTRKTFLWTTLLNSIRSQGKIALVVAS 372
>UniRef100_Q7XW15 OSJNBb0013O03.3 protein [Oryza sativa]
Length = 2052
Score = 69.7 bits (169), Expect = 2e-11
Identities = 38/93 (40%), Positives = 55/93 (58%), Gaps = 1/93 (1%)
Query: 3 RPNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFF 62
R NT D N+L+ +EL + L+ + ++ L +QR V D I+D F+ GFF
Sbjct: 897 RSNTSD-DIVGNRLLDEELTLDCTALSLDASALIPQLNSDQRKVFDTIIDRVSFEKPGFF 955
Query: 63 FLYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
F+YG+GGTGKTF+W + +RS+ IVL AS
Sbjct: 956 FVYGHGGTGKTFLWNAIILKIRSEQKIVLAIAS 988
>UniRef100_Q94LS7 Putative helicase [Oryza sativa]
Length = 1573
Score = 68.9 bits (167), Expect = 3e-11
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 4 PNTIDMPTFTNKLIVDELNYNKDELTKTQTDMLLMLTDEQRCVHDKIMDSKGFDDGGFFF 63
PN + N LI +E+NY+K+ L +L L EQ+ D I++S G F
Sbjct: 1059 PNVAKLSEIENSLINEEMNYDKERLKHQHLQILNTLNIEQKKAFDAIIESAHQSLGKLIF 1118
Query: 64 LYGYGGTGKTFIWKTSLAVVRSKGLIVLNAAS 95
+ GYGGTGKT++WK +RS+G IV+ AS
Sbjct: 1119 VDGYGGTGKTYLWKAITTRLRSEGKIVIAVAS 1150
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.140 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,056,623
Number of Sequences: 2790947
Number of extensions: 7679788
Number of successful extensions: 20564
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 20494
Number of HSP's gapped (non-prelim): 91
length of query: 109
length of database: 848,049,833
effective HSP length: 85
effective length of query: 24
effective length of database: 610,819,338
effective search space: 14659664112
effective search space used: 14659664112
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC140721.12