BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140546.3 + phase: 0
(266 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O82234 Putative chloroplast initiation factor 3 [Arabi... 283 3e-75
UniRef100_Q94B52 Hypothetical protein T10C21.40 [Arabidopsis tha... 282 7e-75
UniRef100_Q6K674 Translation initiation factor IF-3-like [Oryza ... 205 9e-52
UniRef100_UPI000025B91F UPI000025B91F UniRef100 entry 169 7e-41
UniRef100_Q7UA08 Translation initiation factor IF-3 [Synechococc... 134 2e-30
UniRef100_Q7V9N2 Translation initiation factor IF-3 [Prochloroco... 133 5e-30
UniRef100_Q7TV76 Translation initiation factor IF-3 [Prochloroco... 131 2e-29
UniRef100_Q8YNE3 Translation initiation factor IF-3 [Anabaena sp.] 131 2e-29
UniRef100_Q9SUH7 Hypothetical protein T10C21.40 [Arabidopsis tha... 130 3e-29
UniRef100_P72874 Translation initiation factor IF-3 [Synechocyst... 128 1e-28
UniRef100_UPI0000300290 UPI0000300290 UniRef100 entry 127 2e-28
UniRef100_Q8DIG8 Translation initiation factor IF-3 [Synechococc... 127 4e-28
UniRef100_UPI00002D1C80 UPI00002D1C80 UniRef100 entry 126 7e-28
UniRef100_Q8R9C2 Translation initiation factor IF-3 [Thermoanaer... 126 7e-28
UniRef100_P36177 Translation initiation factor IF-3, chloroplast... 126 7e-28
UniRef100_UPI0000264DF6 UPI0000264DF6 UniRef100 entry 125 9e-28
UniRef100_Q9MS97 Translation initiation factor IF-3, chloroplast... 125 9e-28
UniRef100_UPI0000258D92 UPI0000258D92 UniRef100 entry 125 1e-27
UniRef100_UPI000031DD62 UPI000031DD62 UniRef100 entry 125 1e-27
UniRef100_UPI000031BB91 UPI000031BB91 UniRef100 entry 125 1e-27
>UniRef100_O82234 Putative chloroplast initiation factor 3 [Arabidopsis thaliana]
Length = 312
Score = 283 bits (724), Expect = 3e-75
Identities = 162/282 (57%), Positives = 200/282 (70%), Gaps = 24/282 (8%)
Query: 1 MAGITSTTVVPVKLKASHFFSNKLSIPHSLNLQSSPSFTLPSHATVRYGVNLRPSAY--- 57
MAGITS+TV A K HSL S +L T NL PS
Sbjct: 1 MAGITSSTV---GFNAVFTGITKTVSSHSLFSVDSKLCSLRLSKTELSFTNLTPSPRRAF 57
Query: 58 -------GGGGNFR-----RAPPEKDADDGQALDLSTLSSNTVRLIDQSQNMVGVVSLDQ 105
GGGG +R R K+A+ +ALD+S++ S TVRLID QNM+G+VS D+
Sbjct: 58 AVTCRFGGGGGGYRFSGDNRRGRPKEAEIDEALDISSIRSATVRLIDGQQNMLGLVSKDE 117
Query: 106 AIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRDQQKKSAASRMDLKELKMG 165
A+RMA+DAELDLVI+S +ADPPVV++M+YSKYRYE QK+K+DQQKK+ +RMDLKELKMG
Sbjct: 118 AVRMADDAELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKT--TRMDLKELKMG 175
Query: 166 YNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNAIELIRRFQNDVGKLATEE 225
YNIDQHDYSVRL+AA+KFL DGDKVKVIV++KGRE EFRN AIEL+RRFQ ++G+LATEE
Sbjct: 176 YNIDQHDYSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEE 235
Query: 226 AKNFRDKNIFITLIPNKTEVQKPQETPT----KAATDEVSVS 263
+KNFRD+N+FI L+PNK ++KPQE PT K A +E S S
Sbjct: 236 SKNFRDRNMFIILVPNKEMIRKPQEPPTRKKKKTAENEASAS 277
>UniRef100_Q94B52 Hypothetical protein T10C21.40 [Arabidopsis thaliana]
Length = 281
Score = 282 bits (721), Expect = 7e-75
Identities = 156/273 (57%), Positives = 196/273 (71%), Gaps = 23/273 (8%)
Query: 1 MAGITSTTVVPVKLKASHFFSNKLSIPHSLNLQSSPSFTLPSHA-TVRYGVNLRPSAYGG 59
+AG T T PVK K F +L +P + SP A T RYG GG
Sbjct: 14 LAGATKTVSHPVKSK---LFGLRLCVPEFSIVSLSPYHHRRCPAITCRYG--------GG 62
Query: 60 GGNFRRAPPE-----KDADDGQALDLSTLSSNTVRLIDQSQNMVGVVSLDQAIRMAEDAE 114
GG R P + K+++D +LD+S + S TVRLID QNM+G+VS ++A+R AEDAE
Sbjct: 63 GGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLVSKEEAVRRAEDAE 122
Query: 115 LDLVIVSAEADPPVVRIMNYSKYRYELQKKKRDQQKKSAASRMDLKELKMGYNIDQHDYS 174
LDLVI+S +ADPPVVR+M+YSKYRYE QK+K++QQKK+ +RMDLKELKMGYNIDQHDYS
Sbjct: 123 LDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKT--TRMDLKELKMGYNIDQHDYS 180
Query: 175 VRLKAARKFLSDGDKVKVIVNLKGREKEFRNNAIELIRRFQNDVGKLATEEAKNFRDKNI 234
VR++AARKFL DGDKVKVIVN+KGRE EFRN AIEL+RRFQ ++G+L TEE+KNFRD+N+
Sbjct: 181 VRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRNL 240
Query: 235 FITLIPNKTEVQKPQETP----TKAATDEVSVS 263
FI L+PNK ++K QE P K A D+VS +
Sbjct: 241 FIVLVPNKEVIRKVQEPPPKKKKKPADDKVSAA 273
>UniRef100_Q6K674 Translation initiation factor IF-3-like [Oryza sativa]
Length = 200
Score = 205 bits (522), Expect = 9e-52
Identities = 100/164 (60%), Positives = 132/164 (79%), Gaps = 3/164 (1%)
Query: 97 MVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIM---NYSKYRYELQKKKRDQQKKSA 153
MVGVVS+ +A+++A++ +L L I+S + DPPV+R+ +Y K++YE QKKKR QQK+S
Sbjct: 1 MVGVVSVSEAVQIADENDLILAILSLDGDPPVLRLFQEKDYKKHKYEQQKKKRTQQKRSV 60
Query: 154 ASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNAIELIRR 213
A RM LKELKMGYNID HDYSVRLKAARKFL GDKVK++VNLKGRE ++ AIEL+RR
Sbjct: 61 AKRMGLKELKMGYNIDIHDYSVRLKAARKFLKAGDKVKIMVNLKGRENLYKKQAIELLRR 120
Query: 214 FQNDVGKLATEEAKNFRDKNIFITLIPNKTEVQKPQETPTKAAT 257
FQNDVG++ATEE+KNF+++NI++ L+PNK +QK Q+ K T
Sbjct: 121 FQNDVGEMATEESKNFQERNIYLVLVPNKIAIQKEQDELNKKDT 164
>UniRef100_UPI000025B91F UPI000025B91F UniRef100 entry
Length = 172
Score = 169 bits (428), Expect = 7e-41
Identities = 81/152 (53%), Positives = 113/152 (74%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D+++ M+GV+S D+A+ MA + +LDLV++S +ADPP+ RIMNYSKY+YE +KK R+
Sbjct: 11 LRVVDENKEMIGVMSTDEALEMAAERDLDLVVMSPDADPPLARIMNYSKYKYEKEKKDRE 70
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
Q+KK+AA+R+ +KELKM YNID HDY VRL++A+KFL GDKVKVI +GRE +FR
Sbjct: 71 QRKKAAATRVTIKELKMRYNIDTHDYGVRLRSAQKFLGAGDKVKVICQFRGRENDFREMG 130
Query: 208 IELIRRFQNDVGKLATEEAKNFRDKNIFITLI 239
E+ RF DVG+ T E K + N LI
Sbjct: 131 REMFERFIEDVGECGTLENKPNMEGNSMTMLI 162
>UniRef100_Q7UA08 Translation initiation factor IF-3 [Synechococcus sp.]
Length = 217
Score = 134 bits (338), Expect = 2e-30
Identities = 74/177 (41%), Positives = 114/177 (63%), Gaps = 6/177 (3%)
Query: 83 LSSNTVRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQ 142
+S +R++D + +GV+S ++A+ +A++ ELDLV+VS +ADPPV RIM+Y K+++E +
Sbjct: 23 ISYPQLRVVDSDGSQLGVISREEALEVAKERELDLVLVSEKADPPVCRIMDYGKFKFEQE 82
Query: 143 KKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKE 202
KK ++ +KKS + ++KE+KM Y IDQHDY VR+ A +FL GDKVK V +GRE +
Sbjct: 83 KKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAVRFLKAGDKVKCTVIFRGREIQ 140
Query: 203 FRNNAIELIRRFQNDV-GKLATEEAKNFRDKNIFITLIPNKTEVQKPQE---TPTKA 255
A L+RR D+ K ++A +N+ + L P KT + K +E PTKA
Sbjct: 141 HTALAETLLRRMAKDLEEKAEIQQAPKREGRNMIMFLTPRKTPLVKKEEKEAAPTKA 197
>UniRef100_Q7V9N2 Translation initiation factor IF-3 [Prochlorococcus marinus]
Length = 201
Score = 133 bits (334), Expect = 5e-30
Identities = 69/170 (40%), Positives = 111/170 (64%), Gaps = 3/170 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +G++S ++A+ +A+D ELDLV+VS +ADPPV RIMNY K+++E +KK ++
Sbjct: 28 LRVVDADGTQLGIISREEALDVAQDRELDLVLVSEKADPPVCRIMNYGKFKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID+HDY VR+ A +FL GDKVK V +GRE + N A
Sbjct: 88 AKKKS--HQTEVKEVKMRYKIDEHDYQVRIGQATRFLKAGDKVKCTVIFRGREIQHTNLA 145
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNKTEVQKPQETPTKAA 256
L+ R D+ + A ++A +N+ + L P KT + K ++ +A+
Sbjct: 146 ESLLARMAKDLEEPAEVQQAPKREGRNMIMFLTPRKTPLIKKEQELEEAS 195
>UniRef100_Q7TV76 Translation initiation factor IF-3 [Prochlorococcus marinus]
Length = 219
Score = 131 bits (329), Expect = 2e-29
Identities = 71/172 (41%), Positives = 112/172 (64%), Gaps = 6/172 (3%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +GV++ ++A+ +A+D ELDLV+VS +ADPPV RIM+Y K+++E +KK ++
Sbjct: 28 LRVVDADGTQLGVINREEALDVAKDRELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y IDQHDY+VR+ A +FL GDKVK V +GRE + A
Sbjct: 88 AKKKS--HQTEVKEVKMRYKIDQHDYNVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALA 145
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNKT---EVQKPQETPTKA 255
L+RR D+ + A ++A +N+ + L P KT + K + PT+A
Sbjct: 146 ETLLRRMAKDLEEQAEIQQAPKREGRNMIMFLTPRKTPLIKTDKENQIPTRA 197
>UniRef100_Q8YNE3 Translation initiation factor IF-3 [Anabaena sp.]
Length = 177
Score = 131 bits (329), Expect = 2e-29
Identities = 64/156 (41%), Positives = 106/156 (67%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R+ID + +G+++ +A+++AE+ ELDLV++S +ADPPV RIM+Y KY++E +KK R+
Sbjct: 24 IRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKARE 83
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK + D+KE+KM Y I++HDY+VR+K A +FL DGDKVK V +GRE + + A
Sbjct: 84 ARKKQHTA--DVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLA 141
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNK 242
+L++R D+ ++A +N+ + + P K
Sbjct: 142 EDLLKRMATDLEPFGEVQQAPKKEGRNMMMLISPKK 177
>UniRef100_Q9SUH7 Hypothetical protein T10C21.40 [Arabidopsis thaliana]
Length = 170
Score = 130 bits (328), Expect = 3e-29
Identities = 78/158 (49%), Positives = 101/158 (63%), Gaps = 17/158 (10%)
Query: 1 MAGITSTTVVPVKLKASHFFSNKLSIPHSLNLQSSPSFTLPSHA-TVRYGVNLRPSAYGG 59
+AG T T PVK K F +L +P + SP A T RYG GG
Sbjct: 14 LAGATKTVSHPVKSK---LFGLRLCVPEFSIVSLSPYHHRRCPAITCRYG--------GG 62
Query: 60 GGNFRRAPPE-----KDADDGQALDLSTLSSNTVRLIDQSQNMVGVVSLDQAIRMAEDAE 114
GG R P + K+++D +LD+S + S TVRLID QNM+G+VS ++A+R AEDAE
Sbjct: 63 GGGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLVSKEEAVRRAEDAE 122
Query: 115 LDLVIVSAEADPPVVRIMNYSKYRYELQKKKRDQQKKS 152
LDLVI+S +ADPPVVR+M+YSKYRYE QK+K++QQKKS
Sbjct: 123 LDLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKS 160
>UniRef100_P72874 Translation initiation factor IF-3 [Synechocystis sp.]
Length = 177
Score = 128 bits (322), Expect = 1e-28
Identities = 66/156 (42%), Positives = 102/156 (65%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R+ID +G+++ ++A+ +A++ LDLV+VS ADPPV RIM+Y KY++E +KK R+
Sbjct: 23 IRVIDSDGAQLGIITPNEAMEIADERGLDLVLVSETADPPVCRIMDYGKYKFEQEKKARE 82
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK + D+KE+KM Y ID+HDY VR+ A++FL GDKVK VN +GRE + + A
Sbjct: 83 AKKKQHTA--DVKEVKMRYKIDEHDYQVRINQAKRFLKAGDKVKATVNFRGREIQHAHLA 140
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNK 242
EL+ R D+ A ++A +N+ + L P K
Sbjct: 141 KELLDRMATDLATEADIQQAPKREGRNMMMFLSPKK 176
>UniRef100_UPI0000300290 UPI0000300290 UniRef100 entry
Length = 215
Score = 127 bits (320), Expect = 2e-28
Identities = 72/170 (42%), Positives = 111/170 (64%), Gaps = 4/170 (2%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +GV+S D+A+ +A++ ELDLV+VS +ADPPV RIM+Y K+++E +KK ++
Sbjct: 28 LRVVDADGTQLGVISRDEALDVAKERELDLVLVSEKADPPVCRIMDYGKFKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID HDY VR+ A +FL GDKVK V +GRE + A
Sbjct: 88 AKKKS--HQTEVKEVKMRYKIDAHDYQVRIGQAVRFLKAGDKVKCTVIFRGREIQHTALA 145
Query: 208 IELIRRFQNDVGKLATEEAKNFRD-KNIFITLIPNKTEVQKPQ-ETPTKA 255
+L+ R D+ + A + R+ +N+ + L P KT +QK + E TKA
Sbjct: 146 EKLLMRMAKDLEESAEVQQPPKREGRNMIMFLGPRKTPLQKDKPEQATKA 195
>UniRef100_Q8DIG8 Translation initiation factor IF-3 [Synechococcus elongatus]
Length = 182
Score = 127 bits (318), Expect = 4e-28
Identities = 65/156 (41%), Positives = 103/156 (65%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
VR++D + +G++S +AI +A + ELDLV+VS +ADPPV +I++Y K+R+E +KK R+
Sbjct: 29 VRVVDTDGSQLGIMSSQEAIAIAREKELDLVLVSDKADPPVCKIIDYGKFRFEQEKKARE 88
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK S D+KE+KM Y I++HDY+V + A +FL GDKVK V +GRE + + A
Sbjct: 89 ARKKQHTS--DVKEVKMRYKIEEHDYNVCINRAERFLKAGDKVKATVTFRGREIQHSHLA 146
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNK 242
EL+ R ND+ +A ++A +N+ + L P +
Sbjct: 147 EELLNRMANDLQAVAEVQQAPKQEGRNMIMFLAPKR 182
>UniRef100_UPI00002D1C80 UPI00002D1C80 UniRef100 entry
Length = 190
Score = 126 bits (316), Expect = 7e-28
Identities = 68/161 (42%), Positives = 104/161 (64%), Gaps = 3/161 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +GV+ +A+ +A ELDLV+VS +A+PPV RIM+Y KY++E +KK ++
Sbjct: 28 LRVVDSDGKQLGVIDRLKALEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID+HDY VR+ A KFL GDKVK V +GRE + N A
Sbjct: 88 ARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLA 145
Query: 208 IELIRRFQNDVGKLATEEAKNFRD-KNIFITLIPNKTEVQK 247
L+ R ND+ + + + K R+ +N+ + L P KT + K
Sbjct: 146 ETLLLRMANDLEEQSEVQQKPKREGRNMIMFLSPRKTPLIK 186
>UniRef100_Q8R9C2 Translation initiation factor IF-3 [Thermoanaerobacter
tengcongensis]
Length = 180
Score = 126 bits (316), Expect = 7e-28
Identities = 61/156 (39%), Positives = 104/156 (66%), Gaps = 3/156 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
VRLIDQ +G++S +A ++A++ LDLV + A+PPV ++M++ KYRYEL K++++
Sbjct: 26 VRLIDQDGKQIGIMSAKEAYKIAQERHLDLVKIVPNANPPVCKLMDFGKYRYELSKREKE 85
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KK +++KE++M NI+ HD+ V+LK+A KFL DGDKVKV + +GRE + A
Sbjct: 86 AKKKQKI--INVKEIRMSPNIEDHDFGVKLKSAIKFLKDGDKVKVTIRFRGREAAHTSLA 143
Query: 208 IELIRRFQNDVGKLA-TEEAKNFRDKNIFITLIPNK 242
+L++RF ++ + E+A + +N+ + + P K
Sbjct: 144 EDLLKRFAEELREYGNVEKAPSMDGRNMMMVIAPKK 179
>UniRef100_P36177 Translation initiation factor IF-3, chloroplast precursor [Euglena
gracilis]
Length = 538
Score = 126 bits (316), Expect = 7e-28
Identities = 85/256 (33%), Positives = 136/256 (52%), Gaps = 31/256 (12%)
Query: 32 LQSSPSFTLPSHATVRYGVNL-RPSAYGGG-GNFRRAPPEKDADDGQAL----------- 78
L+ SPS TL S+ + G+ L + +G G G R P E++ ++ Q +
Sbjct: 242 LRGSPSSTL-SNLGMGLGLGLGKGKGFGKGFGKGRGFPVEEEVEEEQEVLSWADRRRALA 300
Query: 79 ---------DLSTLSSNTVRLIDQSQN-MVGVVSLDQAIRMAEDAELDLVIVSAEADPPV 128
D+ VR + ++ +GV+S +A+ +AE ++DLV+VS + DPPV
Sbjct: 301 DPDAPPMNEDIKYPQLRLVRAVPGGRDEKLGVMSRQEALELAEAEDIDLVLVSIDTDPPV 360
Query: 129 VRIMNYSKYRYELQKKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGD 188
+++NYSK +YE +KKK+D KK ++KELK+ + I QHDY VR+K ARKFL G
Sbjct: 361 AKLVNYSKLKYESEKKKKDSHKKGKVK--EVKELKVSHKIGQHDYDVRVKQARKFLEGGH 418
Query: 189 KVKVIVNLKGREKEFRNNAIELIRRFQNDVGKLATEEAKNFR-DKNIFITLIPN----KT 243
++KV + KGRE +F +++RFQND+ + +A + + + L P K
Sbjct: 419 RIKVSMEFKGRENQFVEIGRAVMKRFQNDLADMGKADAVPKKLGTRLILNLAPAGEALKV 478
Query: 244 EVQKPQETPTKAATDE 259
++ E KAA +E
Sbjct: 479 IAERRAERDRKAAAEE 494
>UniRef100_UPI0000264DF6 UPI0000264DF6 UniRef100 entry
Length = 190
Score = 125 bits (315), Expect = 9e-28
Identities = 67/164 (40%), Positives = 105/164 (63%), Gaps = 3/164 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +GV+ +A+ +A ELDLV+VS +A+PPV RIM+Y KY++E +KK ++
Sbjct: 28 LRVVDSDGKQLGVIDRLKALEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID+HDY VR+ A KFL GDKVK V +GRE + N A
Sbjct: 88 ARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTVMFRGREIQHSNLA 145
Query: 208 IELIRRFQNDVGKLATEEAKNFRD-KNIFITLIPNKTEVQKPQE 250
L+ + ND+ + + + K R+ +N+ + L P KT + K +
Sbjct: 146 ETLLLKMANDLEEQSEVQQKPKREGRNMIMFLSPRKTPLIKKDD 189
>UniRef100_Q9MS97 Translation initiation factor IF-3, chloroplast [Galdieria
sulphuraria]
Length = 181
Score = 125 bits (315), Expect = 9e-28
Identities = 63/162 (38%), Positives = 108/162 (65%), Gaps = 3/162 (1%)
Query: 83 LSSNTVRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQ 142
+S VR+ID++ +G+ ++ A+++AE+ LDLV+++ + +PPVVRI++Y K+++ +
Sbjct: 22 ISFPIVRIIDENNYQLGIYKIEDALKLAEEKNLDLVLINDKTEPPVVRIIDYGKFKFAQE 81
Query: 143 KKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKE 202
KK R+ +KK ++ +KE+KM Y I+ HDY VR+ A KFL G+KVK+ + KGRE +
Sbjct: 82 KKSREAKKKQ--HQVTVKEIKMRYKIEDHDYQVRINQAIKFLKLGNKVKISLTFKGREIQ 139
Query: 203 FRNNAIELIRRFQNDVGKLAT-EEAKNFRDKNIFITLIPNKT 243
+ + A +LI + + + LA E+ + KNI+I L+P KT
Sbjct: 140 YIDLAEKLIEKIIHSLSSLAEHEKVFDKEGKNIYIMLLPKKT 181
>UniRef100_UPI0000258D92 UPI0000258D92 UniRef100 entry
Length = 190
Score = 125 bits (314), Expect = 1e-27
Identities = 67/164 (40%), Positives = 105/164 (63%), Gaps = 3/164 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +GV+ +A+ +A ELDLV+VS +A+PPV RIM+Y KY++E +KK ++
Sbjct: 28 LRVVDSDGKQLGVIDRLKALEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID+HDY VR+ A +FL GDKVK V +GRE + N A
Sbjct: 88 ARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATRFLKSGDKVKCTVIFRGREIQHSNLA 145
Query: 208 IELIRRFQNDVGKLATEEAKNFRD-KNIFITLIPNKTEVQKPQE 250
L+ R ND+ + + + K R+ +N+ + L P KT + K +
Sbjct: 146 ETLLLRMANDLEEQSEVQQKPKREGRNMIMFLSPRKTPLIKKDD 189
>UniRef100_UPI000031DD62 UPI000031DD62 UniRef100 entry
Length = 184
Score = 125 bits (313), Expect = 1e-27
Identities = 65/157 (41%), Positives = 102/157 (64%), Gaps = 3/157 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +G++ +A+ +A ELDLV+VS +A+PPV RIM+Y KY++E +KK ++
Sbjct: 28 LRVVDSDGKQLGIIDRTKALEIASQRELDLVLVSEKANPPVCRIMDYGKYKFEQEKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID+HDY VR+ A KFL GDKVK V +GRE + N A
Sbjct: 88 ARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTVIFRGREIQHSNLA 145
Query: 208 IELIRRFQNDVGKLATEEAKNFRD-KNIFITLIPNKT 243
L+ + ND+ + + + K R+ +N+ + L P KT
Sbjct: 146 ETLLLKMANDLEEQSEVQQKPKREGRNMIMFLSPRKT 182
>UniRef100_UPI000031BB91 UPI000031BB91 UniRef100 entry
Length = 190
Score = 125 bits (313), Expect = 1e-27
Identities = 67/164 (40%), Positives = 104/164 (62%), Gaps = 3/164 (1%)
Query: 88 VRLIDQSQNMVGVVSLDQAIRMAEDAELDLVIVSAEADPPVVRIMNYSKYRYELQKKKRD 147
+R++D +GV+ +A+ +A ELDLV+VS +A PPV RIM+Y KY++E +KK ++
Sbjct: 28 LRVVDSDGKQLGVIDRLKALEIASQRELDLVLVSEKATPPVCRIMDYGKYKFEQKKKAKE 87
Query: 148 QQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIVNLKGREKEFRNNA 207
+KKS + ++KE+KM Y ID+HDY VR+ A KFL GDKVK V +GRE + N A
Sbjct: 88 ARKKS--HQTEVKEVKMRYKIDKHDYDVRISQASKFLKSGDKVKCTVIFRGREIQHSNLA 145
Query: 208 IELIRRFQNDVGKLATEEAKNFRD-KNIFITLIPNKTEVQKPQE 250
L+ + ND+ + + + K R+ +N+ + L P KT + K +
Sbjct: 146 ETLLLKIANDLEEQSEVQQKPKREGRNMIMFLSPRKTPLIKKDQ 189
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.313 0.130 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,794,107
Number of Sequences: 2790947
Number of extensions: 17031506
Number of successful extensions: 49022
Number of sequences better than 10.0: 524
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 48226
Number of HSP's gapped (non-prelim): 537
length of query: 266
length of database: 848,049,833
effective HSP length: 125
effective length of query: 141
effective length of database: 499,181,458
effective search space: 70384585578
effective search space used: 70384585578
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)
Medicago: description of AC140546.3