BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140025.4 + phase: 0
(277 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8S7G0 Putative polypyrimidine tract-binding protein [... 244 2e-63
UniRef100_Q6YWJ5 Putative polypyrimidine tract-binding protein h... 242 9e-63
UniRef100_Q9MAC5 Putative polypyrimidine tract-binding protein [... 220 3e-56
UniRef100_O82472 Polypyrimidine tract-binding protein homolog [A... 216 4e-55
UniRef100_Q9FGL9 Polypyrimidine tract-binding RNA transport prot... 203 5e-51
UniRef100_Q5ZBG2 Polypyrimidine tract-binding protein 1-like [Or... 190 3e-47
UniRef100_Q5ZBG1 Polypyrimidine tract-binding protein-like [Oryz... 190 3e-47
UniRef100_Q8RWB0 Putative polypyrimidine tract-binding protein [... 159 6e-38
UniRef100_UPI0000439812 UPI0000439812 UniRef100 entry 102 1e-20
UniRef100_UPI000043749F UPI000043749F UniRef100 entry 102 1e-20
UniRef100_UPI000043749E UPI000043749E UniRef100 entry 102 1e-20
UniRef100_UPI0000362ED5 UPI0000362ED5 UniRef100 entry 101 2e-20
UniRef100_Q00438 Polypyrimidine tract-binding protein 1 [Rattus ... 101 2e-20
UniRef100_UPI0000439814 UPI0000439814 UniRef100 entry 100 3e-20
UniRef100_UPI0000439813 UPI0000439813 UniRef100 entry 100 3e-20
UniRef100_UPI0000182246 UPI0000182246 UniRef100 entry 100 7e-20
UniRef100_Q29099 Polypyrimidine tract-binding protein 1 [Sus scr... 100 7e-20
UniRef100_UPI0000362ED7 UPI0000362ED7 UniRef100 entry 99 2e-19
UniRef100_UPI0000273AB8 UPI0000273AB8 UniRef100 entry 99 2e-19
UniRef100_UPI0000361082 UPI0000361082 UniRef100 entry 98 2e-19
>UniRef100_Q8S7G0 Putative polypyrimidine tract-binding protein [Oryza sativa]
Length = 464
Score = 244 bits (623), Expect = 2e-63
Identities = 144/258 (55%), Positives = 163/258 (62%), Gaps = 32/258 (12%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
LPVN SAI+ QPA+G DG+++E E NVLLASIENMQYAVTVDV++TVFSAFGTVQKIA
Sbjct: 220 LPVNSSAID-TLQPAVGADGRKVEAEGNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIA 278
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSR 121
+FEKNG TQALIQYPDVTTA+ A+EALEGHCIYDGGYCKLHLSYSRHTDLNVKA SDKSR
Sbjct: 279 IFEKNGGTQALIQYPDVTTASVAKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHSDKSR 338
Query: 122 DYTVP-----LVPAPV--------WQ-NPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGG 167
DYT+P VP P WQ NPQA Y A +P + T G
Sbjct: 339 DYTIPQGAMQAVPQPPGVPTTSAGWQGNPQAGGAYAPPGAA--------APNHGTT---G 387
Query: 168 QVPSWDLTQHAVRPGYVPVPGAYPGQTGAFPTM-PSYGSAAMPTASSPLAQSSHPGAPHN 226
QVP+W + GY P PGAYPGQ + P + G + P A +S P
Sbjct: 388 QVPNW----NPGNSGYAPAPGAYPGQMYSSPMQYGASGGFSAPAAPPQELHTSQQMPPPQ 443
Query: 227 VNLQPSGGSTSGPGSSPH 244
QP G G PH
Sbjct: 444 YGNQPGPAGAPGTG-QPH 460
Score = 101 bits (252), Expect = 2e-20
Identities = 61/112 (54%), Positives = 72/112 (63%), Gaps = 7/112 (6%)
Query: 25 ETESNVLLASIENMQYA-VTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAA 83
ET NVLL +IE +Q VT+DVI+ VFSAFG V KIA FEK QALIQY D TA+A
Sbjct: 110 ETAGNVLLVTIEGVQANDVTIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAATASA 169
Query: 84 AREALEGHCI------YDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP 129
AREAL+G I C L +S+S H DLN+K S +SRDYT P +P
Sbjct: 170 AREALDGRSIPRYLLPEHVTSCCLRISFSAHKDLNIKFQSHRSRDYTNPYLP 221
>UniRef100_Q6YWJ5 Putative polypyrimidine tract-binding protein homolog [Oryza
sativa]
Length = 461
Score = 242 bits (617), Expect = 9e-63
Identities = 143/270 (52%), Positives = 164/270 (59%), Gaps = 35/270 (12%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
LPVN +AIEG AQP +GPDGK E ESNVLLASIENMQYAVTVDV++TVFSAFGTVQKIA
Sbjct: 216 LPVNPTAIEGIAQPTLGPDGKIKEPESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIA 275
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSR 121
MFEKNG QALIQYPD+TTAA A++ALEGHCIYDGGYCKLHLSYSRHTDLNVKA ++SR
Sbjct: 276 MFEKNGGMQALIQYPDITTAAVAKQALEGHCIYDGGYCKLHLSYSRHTDLNVKAHDERSR 335
Query: 122 DYTVPLVPAPVWQNPQAAPMYPTNSPAYQTQVPG----GSPAYQTQVPGGQVPSWDLTQH 177
DYTV P+ Q AP T A+Q P GS A T P GQVP+W+
Sbjct: 336 DYTVSSDPSAQMQAAAQAPGPSTPGVAWQNTAPSASFYGSTAAAT--PVGQVPAWNPNMQ 393
Query: 178 AVRPGYVPVPGAYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNVNLQPSGGSTS 237
A GA+ + A+PT P MP + PH + S G+
Sbjct: 394 A---------GAFGSASSAYPTQP-----MMPGS-----------VPHYPGIGSSSGALP 428
Query: 238 GPGSSPHMQQNLGAQGMVRPGAPPNVRPGG 267
+ H G V P AP + P G
Sbjct: 429 VSFQASHQMPQYG----VPPAAPHHAPPAG 454
Score = 88.6 bits (218), Expect = 2e-16
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 11/121 (9%)
Query: 25 ETESNVLLASIENMQ-YAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAA 83
++ NVLL + E +Q +++DVI+ VFSAFG V KIA FEK QALIQY D TA
Sbjct: 106 DSSGNVLLVTFEGVQPNDISIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALE 165
Query: 84 AREALEGHCI------YDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAPVWQNPQ 137
A+ +L+G I C L +++S H DLN+K S +SRDYT P +P NP
Sbjct: 166 AKNSLDGRSIPRYLLPEHVPTCHLRITFSAHKDLNIKFQSHRSRDYTNPYLPV----NPT 221
Query: 138 A 138
A
Sbjct: 222 A 222
>UniRef100_Q9MAC5 Putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
Length = 399
Score = 220 bits (561), Expect = 3e-56
Identities = 116/186 (62%), Positives = 133/186 (71%), Gaps = 25/186 (13%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
LPVN +A++G+ QPA+G DGK++E++SNVLL IENMQYAVTVDV++TVFSA+GTVQKIA
Sbjct: 216 LPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIA 275
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSR 121
+FEKNG TQALIQY D+ TAA A+EALEGHCIYDGGYCKL LSYSRHTDLNVKAFSDKSR
Sbjct: 276 IFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSR 335
Query: 122 DYTVP---------------LVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSP-AYQTQVP 165
DYT+P P WQNPQA Y GGSP Y + P
Sbjct: 336 DYTLPDLSLLVAQKGPAVSGSAPPAGWQNPQAQSQYSGY---------GGSPYMYPSSDP 386
Query: 166 GGQVPS 171
G PS
Sbjct: 387 NGASPS 392
Score = 101 bits (252), Expect = 2e-20
Identities = 57/112 (50%), Positives = 73/112 (64%), Gaps = 7/112 (6%)
Query: 25 ETESNVLLASIENMQ-YAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAA 83
+ NVLL + E ++ + V++DVI+ VFSAFG V KIA FEK QAL+Q+ DV TA+A
Sbjct: 106 DVPGNVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASA 165
Query: 84 AREALEGHCI------YDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP 129
AR AL+G I G C L +SYS HTDLN+K S +SRDYT P +P
Sbjct: 166 ARSALDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLP 217
>UniRef100_O82472 Polypyrimidine tract-binding protein homolog [Arabidopsis thaliana]
Length = 418
Score = 216 bits (551), Expect = 4e-55
Identities = 107/156 (68%), Positives = 123/156 (78%), Gaps = 15/156 (9%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
LPVN +A++G+ QPA+G DGK++E++SNVLL IENMQYAVTVDV++TVFSA+GTVQKIA
Sbjct: 216 LPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIA 275
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSR 121
+FEKNG TQALIQY D+ TAA A+EALEGHCIYDGGYCKL LSYSRHTDLNVKAFSDKSR
Sbjct: 276 IFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSR 335
Query: 122 DYTVP---------------LVPAPVWQNPQAAPMY 142
DYT+P P WQNPQA Y
Sbjct: 336 DYTLPDLSLLVAQKGPAVSGSAPPAGWQNPQAQSQY 371
Score = 101 bits (252), Expect = 2e-20
Identities = 57/112 (50%), Positives = 73/112 (64%), Gaps = 7/112 (6%)
Query: 25 ETESNVLLASIENMQ-YAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAA 83
+ NVLL + E ++ + V++DVI+ VFSAFG V KIA FEK QAL+Q+ DV TA+A
Sbjct: 106 DVPGNVLLVTFEGVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASA 165
Query: 84 AREALEGHCI------YDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP 129
AR AL+G I G C L +SYS HTDLN+K S +SRDYT P +P
Sbjct: 166 ARSALDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLP 217
>UniRef100_Q9FGL9 Polypyrimidine tract-binding RNA transport protein-like
[Arabidopsis thaliana]
Length = 429
Score = 203 bits (516), Expect = 5e-51
Identities = 118/225 (52%), Positives = 139/225 (61%), Gaps = 13/225 (5%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
LPV SAI+ Q A+G DGK++E ESNVLLASIENMQYAVT+DV++ VF+AFG VQKIA
Sbjct: 217 LPVAPSAIDSTGQVAVGVDGKKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIA 276
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSR 121
MF+KNG QALIQY DV TA A+EALEGHCIYDGG+CKLH++YSRHTDL++K +D+SR
Sbjct: 277 MFDKNGGVQALIQYSDVQTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSR 336
Query: 122 DYTVPLVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRP 181
DYT+P P P+ Q P P Y N Y GGS Q Q P G W V+P
Sbjct: 337 DYTMPNPPVPMPQQPVQNP-YAGNPQQY--HAAGGSHHQQQQQPQG---GW------VQP 384
Query: 182 GYVPVPGAYPGQTGAFPTMPSYGSAAM-PTASSPLAQSSHPGAPH 225
G G G + PS S P P PG H
Sbjct: 385 GGQGSMGMGGGGHNHYMAPPSSSSMHQGPGGHMPPQHYGGPGPMH 429
Score = 90.1 bits (222), Expect = 6e-17
Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 29 NVLLASIENMQYA-VTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREA 87
NVLL +IE V++DV++ VFSAFG V KI FEK QAL+Q+ D TA AA+ A
Sbjct: 111 NVLLVTIEGDDARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLA 170
Query: 88 LEGHCI------YDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP 129
L+G I G C L ++YS HTDL VK S +SRDYT P +P
Sbjct: 171 LDGRSIPRYLLAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLP 218
>UniRef100_Q5ZBG2 Polypyrimidine tract-binding protein 1-like [Oryza sativa]
Length = 554
Score = 190 bits (483), Expect = 3e-47
Identities = 132/282 (46%), Positives = 157/282 (54%), Gaps = 42/282 (14%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
LPV SAI+G+ GPDGK+ E ESNVLLAS+ENMQY VT+DV++ VFSAFG VQKIA
Sbjct: 215 LPVAPSAIDGS-----GPDGKKQEAESNVLLASVENMQYVVTIDVLHEVFSAFGFVQKIA 269
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSR 121
+FEKN QALIQYPD+ TA AA+EALEGH IY+GGYCKLHL++SRHTDLNVK +++ R
Sbjct: 270 IFEKNSGFQALIQYPDIQTAVAAKEALEGHSIYEGGYCKLHLTFSRHTDLNVKVNNERGR 329
Query: 122 DY----TVP-------LVPAPVWQNP-QAAPMYPTNS--PAYQTQVPGGSPA--YQTQVP 165
DY T P L P PV+ AP T + P T P G+P+ Y + P
Sbjct: 330 DYTGGNTAPTSNQPSILGPQPVYSGAYNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEP 389
Query: 166 GGQVPSWDLTQHAVRPGYVPV---PGAYPGQTGAFPT-MPSYGSAAMPTASSPL-AQSSH 220
Q P AV G P+ G G G P P YGS P S+ H
Sbjct: 390 LPQTP-------AVPSGGAPLYTSQGILQGPPGVPPAQFPGYGSPQFPPGSAQAQMHQQH 442
Query: 221 P-----GAPHNVNLQPSGGS---TSGPGSSPHMQQNLGAQGM 254
P P +N QP GS G G P +Q G Q M
Sbjct: 443 PVQGSQQMPGQMNHQPPPGSFMQYPGDGGRP-VQDAPGQQAM 483
Score = 96.3 bits (238), Expect = 8e-19
Identities = 57/112 (50%), Positives = 72/112 (63%), Gaps = 7/112 (6%)
Query: 25 ETESNVLLASIEN-MQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAA 83
E NVLL S+E + AV++DV++ VFSAFG VQKIA FEK QALIQ+ D TA++
Sbjct: 105 EAAGNVLLVSMEGVLPDAVSIDVLHLVFSAFGFVQKIATFEKASGYQALIQFCDTETASS 164
Query: 84 AREALEGHCIYD------GGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP 129
A+ AL+G CI C L ++YS HT LNVK S +SRDYT P +P
Sbjct: 165 AKAALDGRCIPSYLLPELDVPCTLRINYSAHTVLNVKFQSHRSRDYTNPYLP 216
>UniRef100_Q5ZBG1 Polypyrimidine tract-binding protein-like [Oryza sativa]
Length = 448
Score = 190 bits (483), Expect = 3e-47
Identities = 132/282 (46%), Positives = 157/282 (54%), Gaps = 42/282 (14%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
LPV SAI+G+ GPDGK+ E ESNVLLAS+ENMQY VT+DV++ VFSAFG VQKIA
Sbjct: 109 LPVAPSAIDGS-----GPDGKKQEAESNVLLASVENMQYVVTIDVLHEVFSAFGFVQKIA 163
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSR 121
+FEKN QALIQYPD+ TA AA+EALEGH IY+GGYCKLHL++SRHTDLNVK +++ R
Sbjct: 164 IFEKNSGFQALIQYPDIQTAVAAKEALEGHSIYEGGYCKLHLTFSRHTDLNVKVNNERGR 223
Query: 122 DY----TVP-------LVPAPVWQNP-QAAPMYPTNS--PAYQTQVPGGSPA--YQTQVP 165
DY T P L P PV+ AP T + P T P G+P+ Y + P
Sbjct: 224 DYTGGNTAPTSNQPSILGPQPVYSGAYNNAPSSATGAVVPPGTTLTPPGAPSHPYTSSEP 283
Query: 166 GGQVPSWDLTQHAVRPGYVPV---PGAYPGQTGAFPT-MPSYGSAAMPTASSPL-AQSSH 220
Q P AV G P+ G G G P P YGS P S+ H
Sbjct: 284 LPQTP-------AVPSGGAPLYTSQGILQGPPGVPPAQFPGYGSPQFPPGSAQAQMHQQH 336
Query: 221 P-----GAPHNVNLQPSGGS---TSGPGSSPHMQQNLGAQGM 254
P P +N QP GS G G P +Q G Q M
Sbjct: 337 PVQGSQQMPGQMNHQPPPGSFMQYPGDGGRP-VQDAPGQQAM 377
Score = 80.1 bits (196), Expect = 6e-14
Identities = 46/86 (53%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 50 VFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCIYD------GGYCKLHL 103
VFSAFG VQKIA FEK QALIQ+ D TA++A+ AL+G CI C L +
Sbjct: 25 VFSAFGFVQKIATFEKASGYQALIQFCDTETASSAKAALDGRCIPSYLLPELDVPCTLRI 84
Query: 104 SYSRHTDLNVKAFSDKSRDYTVPLVP 129
+YS HT LNVK S +SRDYT P +P
Sbjct: 85 NYSAHTVLNVKFQSHRSRDYTNPYLP 110
>UniRef100_Q8RWB0 Putative polypyrimidine tract-binding protein [Arabidopsis
thaliana]
Length = 189
Score = 159 bits (403), Expect = 6e-38
Identities = 74/98 (75%), Positives = 89/98 (90%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
LPVN +A++G+ QPA+G DGK++E++SNVLL IENMQYAVTVDV++TVFSA+GTVQKIA
Sbjct: 91 LPVNQTAMDGSMQPALGADGKKVESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIA 150
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYC 99
+FEKNG TQALIQY D+ TAA A+EALEGHCIYDGGYC
Sbjct: 151 IFEKNGSTQALIQYSDIPTAAMAKEALEGHCIYDGGYC 188
Score = 89.0 bits (219), Expect = 1e-16
Identities = 49/90 (54%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 46 VINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREALEGHCI------YDGGYC 99
+I VFSAFG V KIA FEK QAL+Q+ DV TA+AAR AL+G I G C
Sbjct: 3 IIGQVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAHVGSC 62
Query: 100 KLHLSYSRHTDLNVKAFSDKSRDYTVPLVP 129
L +SYS HTDLN+K S +SRDYT P +P
Sbjct: 63 SLRMSYSAHTDLNIKFQSHRSRDYTNPYLP 92
>UniRef100_UPI0000439812 UPI0000439812 UniRef100 entry
Length = 558
Score = 102 bits (254), Expect = 1e-20
Identities = 73/209 (34%), Positives = 106/209 (49%), Gaps = 15/209 (7%)
Query: 7 SAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKN 66
+A++ + G D + S VL +EN+ Y VT+DV++ +FS FGTV K+ F KN
Sbjct: 167 NAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVITFTKN 226
Query: 67 GQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVP 126
Q QAL+Q+ D TA A+ AL+G IY+ G C L +S+S+ T LNVK +DKSRDYT P
Sbjct: 227 NQFQALLQFTDGLTAQHAKLALDGQNIYN-GCCTLRISFSKLTSLNVKYNNDKSRDYTRP 285
Query: 127 LVPAPVWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPV 186
+P + P ++ A PG A P++ + Q +
Sbjct: 286 DLP-----TGDSQPALEHHAVAAAFAAPGIISAAPYASAHAFPPAFAIQQAGL------- 333
Query: 187 PGAYPGQTGAFPTMPSYGSAAMPTASSPL 215
PG GA ++ G+AA A+S L
Sbjct: 334 --TIPGVPGALASLTIPGAAAAAAAASRL 360
>UniRef100_UPI000043749F UPI000043749F UniRef100 entry
Length = 525
Score = 102 bits (253), Expect = 1e-20
Identities = 56/123 (45%), Positives = 78/123 (62%), Gaps = 1/123 (0%)
Query: 7 SAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKN 66
+A++ DG + ++S VL +EN+ Y VT+DV++ +FS FGTV KI F KN
Sbjct: 118 NAVQTGGMSLAAIDGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN 177
Query: 67 GQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVP 126
Q QAL+QY D TA A+ +L+G IY+ C L +S+S+ T LNVK +DKSRDYT P
Sbjct: 178 NQFQALVQYSDGMTAQHAKLSLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRP 236
Query: 127 LVP 129
+P
Sbjct: 237 DLP 239
>UniRef100_UPI000043749E UPI000043749E UniRef100 entry
Length = 552
Score = 102 bits (253), Expect = 1e-20
Identities = 56/123 (45%), Positives = 78/123 (62%), Gaps = 1/123 (0%)
Query: 7 SAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKN 66
+A++ DG + ++S VL +EN+ Y VT+DV++ +FS FGTV KI F KN
Sbjct: 148 NAVQTGGMSLAAIDGAGMGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKN 207
Query: 67 GQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVP 126
Q QAL+QY D TA A+ +L+G IY+ C L +S+S+ T LNVK +DKSRDYT P
Sbjct: 208 NQFQALVQYSDGMTAQHAKLSLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRP 266
Query: 127 LVP 129
+P
Sbjct: 267 DLP 269
>UniRef100_UPI0000362ED5 UPI0000362ED5 UniRef100 entry
Length = 514
Score = 101 bits (251), Expect = 2e-20
Identities = 60/151 (39%), Positives = 88/151 (57%), Gaps = 8/151 (5%)
Query: 28 SNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREA 87
S+VL +EN+ Y V++D + +FS FGTV +I +F KN Q QAL+QYPD A AA+ +
Sbjct: 145 SSVLRVVVENLLYPVSLDALCQIFSKFGTVLRIIVFTKNSQFQALLQYPDAACAQAAKLS 204
Query: 88 LEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP----APVWQNPQAAPMYP 143
L+G IY+ C L +S+S+ T LNVK ++KSRD+T P +P P ++P A +
Sbjct: 205 LDGQNIYN-ACCTLRISFSKLTSLNVKYNNEKSRDFTRPDLPPGDGQPTLEHPSMAAAFA 263
Query: 144 ---TNSPAYQTQVPGGSPAYQTQVPGGQVPS 171
++ Y SP+Y Q G VP+
Sbjct: 264 PGIISAAPYAGAAQTFSPSYTIQPAGVTVPA 294
>UniRef100_Q00438 Polypyrimidine tract-binding protein 1 [Rattus norvegicus]
Length = 555
Score = 101 bits (251), Expect = 2e-20
Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 23/225 (10%)
Query: 12 AAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQA 71
AA A G + +S VL +EN+ Y VT+DV++ +FS FGTV KI F KN Q QA
Sbjct: 164 AASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQA 223
Query: 72 LIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAP 131
L+QY D +A A+ +L+G IY+ C L + +S+ T LNVK +DKSRDYT P +P+
Sbjct: 224 LLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS- 281
Query: 132 VWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVP-GGQVPSWDLTQHAVRPGYVPVPGAY 190
+ T + A+ G+P + P G VPS H P + +
Sbjct: 282 ---GDSQPSLDQTMAAAF------GAPGIMSASPYAGAVPS-----HLCHPSRAGL--SV 325
Query: 191 PGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNV----NLQP 231
P GA + +AA A+ +A GA ++V NL P
Sbjct: 326 PNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNSVLLVSNLNP 370
>UniRef100_UPI0000439814 UPI0000439814 UniRef100 entry
Length = 481
Score = 100 bits (250), Expect = 3e-20
Identities = 61/149 (40%), Positives = 88/149 (58%), Gaps = 4/149 (2%)
Query: 7 SAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKN 66
+A++ + G D + S VL +EN+ Y VT+DV++ +FS FGTV K+ F KN
Sbjct: 123 NAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVITFTKN 182
Query: 67 GQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVP 126
Q QAL+Q+ D TA A+ AL+G IY+ G C L +S+S+ T LNVK +DKSRDYT P
Sbjct: 183 NQFQALLQFTDGLTAQHAKLALDGQNIYN-GCCTLRISFSKLTSLNVKYNNDKSRDYTRP 241
Query: 127 LVPAPVWQNPQAAPMYPTNSPAYQTQVPG 155
+P + Q A + + A+ +PG
Sbjct: 242 DLPT---GDSQPALEHHAVAAAFGLTIPG 267
>UniRef100_UPI0000439813 UPI0000439813 UniRef100 entry
Length = 503
Score = 100 bits (250), Expect = 3e-20
Identities = 61/149 (40%), Positives = 88/149 (58%), Gaps = 4/149 (2%)
Query: 7 SAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKN 66
+A++ + G D + S VL +EN+ Y VT+DV++ +FS FGTV K+ F KN
Sbjct: 138 NAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKVITFTKN 197
Query: 67 GQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVP 126
Q QAL+Q+ D TA A+ AL+G IY+ G C L +S+S+ T LNVK +DKSRDYT P
Sbjct: 198 NQFQALLQFTDGLTAQHAKLALDGQNIYN-GCCTLRISFSKLTSLNVKYNNDKSRDYTRP 256
Query: 127 LVPAPVWQNPQAAPMYPTNSPAYQTQVPG 155
+P + Q A + + A+ +PG
Sbjct: 257 DLPT---GDSQPALEHHAVAAAFGLTIPG 282
>UniRef100_UPI0000182246 UPI0000182246 UniRef100 entry
Length = 555
Score = 99.8 bits (247), Expect = 7e-20
Identities = 72/212 (33%), Positives = 103/212 (47%), Gaps = 26/212 (12%)
Query: 12 AAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQA 71
AA A G + +S VL +EN+ Y VT+DV++ +FS FGTV KI F KN Q QA
Sbjct: 155 AASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQA 214
Query: 72 LIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAP 131
L+QY D +A A+ +L+G IY+ C L + +S+ T LNVK +DKSRDYT P +P+
Sbjct: 215 LLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS- 272
Query: 132 VWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVPGGQVPSWDLTQHAVRPGYVPVPGAYP 191
+ T + A+ G+P + P VPS H +P
Sbjct: 273 ---GDSQPSLDQTMAAAF------GAPGIMSASPYAGVPS-----HL----------CHP 308
Query: 192 GQTGAFPTMPSYGSAAMPTASSPLAQSSHPGA 223
+PS+ ++P LA + P A
Sbjct: 309 SGRRLTTVLPSFAGLSVPNVHGALAPLAIPSA 340
>UniRef100_Q29099 Polypyrimidine tract-binding protein 1 [Sus scrofa]
Length = 557
Score = 99.8 bits (247), Expect = 7e-20
Identities = 79/227 (34%), Positives = 114/227 (49%), Gaps = 26/227 (11%)
Query: 12 AAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQA 71
AA A G + +S VL +EN+ Y VT+DV++ +FS FGTV KI F KN Q QA
Sbjct: 165 AASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQA 224
Query: 72 LIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVPAP 131
L+QY D +A A+ +L+G IY+ C L + +S+ T LNVK +DKSRDYT P +P+
Sbjct: 225 LLQYADPVSAQHAKLSLDGQNIYN-ACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS- 282
Query: 132 VWQNPQAAPMYPTNSPAYQTQVPGGSPAYQTQVP---GGQVPSWDLTQHAVRPGYVPVPG 188
+ T + A+ G+P + P G P++ + Q A V VP
Sbjct: 283 ---GDNQPSLDQTMAAAF------GAPGIMSASPYAGAGFPPTFAIPQAAT----VSVPN 329
Query: 189 AYPGQTGAFPTMPSYGSAAMPTASSPLAQSSHPGAPHNV----NLQP 231
+ GA + +AA A+ +A GA ++V NL P
Sbjct: 330 VH----GALAPLAIPSAAARAAAAGRIAIPGLAGAGNSVLLVSNLNP 372
>UniRef100_UPI0000362ED7 UPI0000362ED7 UniRef100 entry
Length = 470
Score = 98.6 bits (244), Expect = 2e-19
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 5/125 (4%)
Query: 28 SNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAAREA 87
S+VL +EN+ Y V++D + +FS FGTV +I +F KN Q QAL+QYPD A AA+ +
Sbjct: 125 SSVLRVVVENLLYPVSLDALCQIFSKFGTVLRIIVFTKNSQFQALLQYPDAACAQAAKLS 184
Query: 88 LEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP----APVWQNPQAAPMYP 143
L+G IY+ C L +S+S+ T LNVK ++KSRD+T P +P P ++P A +
Sbjct: 185 LDGQNIYN-ACCTLRISFSKLTSLNVKYNNEKSRDFTRPDLPPGDGQPTLEHPSMAAAFG 243
Query: 144 TNSPA 148
PA
Sbjct: 244 VTVPA 248
>UniRef100_UPI0000273AB8 UPI0000273AB8 UniRef100 entry
Length = 217
Score = 98.6 bits (244), Expect = 2e-19
Identities = 54/103 (52%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 27 ESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIAMFEKNGQTQALIQYPDVTTAAAARE 86
+S VL +EN+ Y VT+DV++ +FS FGTV KI F KN Q QALIQY D TA A+
Sbjct: 19 QSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALIQYADSMTAQHAKL 78
Query: 87 ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPLVP 129
+L+G IY+ C L +S+S+ T LNVK +DKSRDYT P +P
Sbjct: 79 SLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLP 120
>UniRef100_UPI0000361082 UPI0000361082 UniRef100 entry
Length = 495
Score = 98.2 bits (243), Expect = 2e-19
Identities = 64/154 (41%), Positives = 89/154 (57%), Gaps = 16/154 (10%)
Query: 2 LPVNHSAIEGAAQPAIGPDGKRIETESNVLLASIENMQYAVTVDVINTVFSAFGTVQKIA 61
+P + ++I GAA +S VL +EN+ Y VT++V++ +FS FGTV KI
Sbjct: 150 IPTDPASIAGAA------------AQSPVLRVIVENLFYPVTLEVLHQIFSKFGTVLKII 197
Query: 62 MFEKNGQTQALIQYPDVTTAAAAREALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSR 121
F KN Q QALIQ+ D TA A+ +L+G IY+ C L +S+S+ T LNVK +DKSR
Sbjct: 198 TFTKNNQFQALIQHVDSMTAQHAKLSLDGQNIYN-ACCTLRISFSKLTSLNVKYNNDKSR 256
Query: 122 DYTVPLVPAPVWQNPQAAPMYPTNSPAYQTQVPG 155
DYT P +P Q P P T + A+ +PG
Sbjct: 257 DYTRPDLPTADSQ-PSLDPQ--TMAAAFGLSMPG 287
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.312 0.130 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 537,022,336
Number of Sequences: 2790947
Number of extensions: 25721047
Number of successful extensions: 86659
Number of sequences better than 10.0: 3011
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 2876
Number of HSP's that attempted gapping in prelim test: 77289
Number of HSP's gapped (non-prelim): 8629
length of query: 277
length of database: 848,049,833
effective HSP length: 126
effective length of query: 151
effective length of database: 496,390,511
effective search space: 74954967161
effective search space used: 74954967161
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 74 (33.1 bits)
Medicago: description of AC140025.4