BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140025.16 - phase: 0
(801 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum] 1208 0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ... 585 e-165
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum] 516 e-144
UniRef100_Q93Y69 Putative gag-pol [Oryza sativa] 510 e-143
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa... 468 e-130
UniRef100_Q6L974 GAG-POL [Vitis vinifera] 453 e-125
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana] 424 e-117
UniRef100_Q40580 Integrase [Nicotiana tabacum] 423 e-117
UniRef100_Q7XNV9 OSJNBb0015G09.7 protein [Oryza sativa] 412 e-113
UniRef100_Q5U6F6 Orf764 protein [Beta vulgaris subsp. vulgaris] 411 e-113
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa] 411 e-113
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa] 410 e-113
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa] 410 e-113
UniRef100_Q9MFD2 Orf764 protein [Beta vulgaris subsp. vulgaris] 410 e-113
UniRef100_Q7XDS6 Putative gypsy-type retrotransposon [Oryza sativa] 409 e-112
UniRef100_Q9SSW6 GAG-POL [Oryza sativa] 409 e-112
UniRef100_Q8RUA5 Putative gag-pol [Oryza sativa] 409 e-112
UniRef100_Q8LMM4 Putative gag-pol [Oryza sativa] 408 e-112
UniRef100_Q60DY3 Putative polyprotein [Oryza sativa] 407 e-112
UniRef100_Q75IS9 Putative polyprotein [Oryza sativa] 407 e-112
>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
Length = 2262
Score = 1208 bits (3126), Expect = 0.0
Identities = 556/784 (70%), Positives = 678/784 (85%), Gaps = 8/784 (1%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
L KNQ I WND+CQ+AFD IK YL +PPIL+PPV GRPLI+YLSV + S+GCVLG+ DE+
Sbjct: 1486 LRKNQAIKWNDDCQKAFDKIKEYLQKPPILIPPVPGRPLIMYLSVTENSMGCVLGRHDES 1545
Query: 79 GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
G+KEHAIYYLSKKFTDCETRY++L KTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIF
Sbjct: 1546 GRKEHAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIF 1605
Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
EK +TG++ARWQM+L+EYDI + +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMY
Sbjct: 1606 EKPALTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMY 1665
Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTN 258
LK KDC+EPL++EGPDP+ KW L+FDGAVN G G+GAV+++ +G H+PF+AR+ F+ TN
Sbjct: 1666 LKMKDCKEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKGAHMPFSARLTFDVTN 1725
Query: 259 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTY 318
N AEYEACI GIEEAID+RIK LDI+GDSALV+NQ+ G+W T+ LIPYRDY RR+LT+
Sbjct: 1726 NEAEYEACIMGIEEAIDLRIKTLDIFGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTF 1785
Query: 319 FTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAG 378
F KV+L+H+PRDENQMADALATLSSM +VN WN VP + V RLERP++VFA V
Sbjct: 1786 FKKVKLYHVPRDENQMADALATLSSMIKVNWWNHVPHVAVNRLERPAYVFAAESV----- 1840
Query: 379 ENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLD-GDILYKRNYDMVLLR 437
V+D KPWYYDIK FL ++EYP GASK DKKTLRRLA F L+ D+LYKRN+DMVLLR
Sbjct: 1841 --VIDEKPWYYDIKNFLKTQEYPEGASKNDKKTLRRLAGSFYLNQDDVLYKRNFDMVLLR 1898
Query: 438 CVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYA 497
C+D EA+ LM +VH+G+FGTHA GH M++KLLRAGYYWM ME DC+++ARKCHKCQIYA
Sbjct: 1899 CMDRPEADMLMQEVHEGSFGTHAGGHAMAKKLLRAGYYWMTMESDCFKYARKCHKCQIYA 1958
Query: 498 DKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 557
D++HVPP LNV++SPWPF+MWGIDMIG+IEP ASNGHRFILVAIDYFTKWVEAASY N+
Sbjct: 1959 DRVHVPPSPLNVMNSPWPFAMWGIDMIGKIEPTASNGHRFILVAIDYFTKWVEAASYANI 2018
Query: 558 TKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 617
TKQVV +FIK IICRYGVP +IITDNG+NLNN +++ LC++FKIEHHNSSPYRP+MNGA
Sbjct: 2019 TKQVVTRFIKKEIICRYGVPERIITDNGSNLNNKMMKELCKDFKIEHHNSSPYRPKMNGA 2078
Query: 618 VEAANKNIKRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 677
VEAANKNIK+IV+KMV TYKDWHEMLP+ALHGYRT+VR+STGATP+SLVYGMEAVLP+EV
Sbjct: 2079 VEAANKNIKKIVRKMVVTYKDWHEMLPFALHGYRTSVRTSTGATPYSLVYGMEAVLPVEV 2138
Query: 678 EIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREF 737
EIPSLRV+++ KL EAEW ++R+++L+LIEE+R+ + GQ YQ RMK AFD+KV PR +
Sbjct: 2139 EIPSLRVLLDVKLDEAEWIRTRFNELSLIEERRLAVVCHGQLYQRRMKRAFDQKVRPRSY 2198
Query: 738 KVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVK 797
++G+LVLKR + D RGKWTPNYEGPYVVKK FSGGAL+LT MDG + P+PVN+D+VK
Sbjct: 2199 QIGDLVLKRILPPGTDNRGKWTPNYEGPYVVKKVFSGGALMLTTMDGEDFPSPVNSDVVK 2258
Query: 798 KYFA 801
KYFA
Sbjct: 2259 KYFA 2262
>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0433F09 [Oryza sativa]
Length = 2876
Score = 585 bits (1509), Expect = e-165
Identities = 319/796 (40%), Positives = 462/796 (57%), Gaps = 31/796 (3%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
+ K P VW++ECQ FDSIK YLL PP+L PV+GRPLILY++ S+G +L Q ++
Sbjct: 2097 MKKGTPFVWDEECQNGFDSIKRYLLNPPVLAAPVKGRPLILYIATQPASIGALLAQHNDE 2156
Query: 79 GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
GK E A YYLS+ E Y+ + K C AL +A K+LRHY++ H LI+R DPI+Y+
Sbjct: 2157 GK-EVACYYLSRTMVGAEQNYSPIEKLCLALIFALKKLRHYMLAHQIQLIARADPIRYVL 2215
Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
+ V+TG++ +W +L+ EYDI F QKAIKG LA+ LA P+ D P+ + PDEEI
Sbjct: 2216 SQPVLTGRLGKWALLMMEYDITFVPQKAIKGQALAEFLATHPMPDDSPLIANLPDEEIFT 2275
Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGA----VNAYGK-----GIGAVIVSLQGHHIPFT 249
+ ++ +W L FDGA +N G G G V + QG I +
Sbjct: 2276 AELQE--------------QWELYFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHS 2321
Query: 250 ARILFE-CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPY 308
+L E C+NN AEYEA IFG+ A+ M ++ L +GDS L+I QI +E +L+PY
Sbjct: 2322 FSLLKEECSNNEAEYEALIFGLLLALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPY 2381
Query: 309 RDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVF 368
ARRL+ F +E+ H+PR +N ADALA L++ N I+ +R P+ +
Sbjct: 2382 YTVARRLMDKFEHIEVIHVPRSKNAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLE 2441
Query: 369 AIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYK 428
I + ++ N + + W + P +++ L+R ++ +LYK
Sbjct: 2442 LIPEEVNIIITNSAEEEDWRQPFLDYFKHGSLPE--DPVERRQLQRRLPSYIYKAGVLYK 2499
Query: 429 RNYDM-VLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHA 487
R+Y VLLRCVD EA +++ +VH G G H +G M + GYYW + DC + A
Sbjct: 2500 RSYGQEVLLRCVDRSEANRVLQEVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTA 2559
Query: 488 RKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTK 547
+ CH CQI+ + H PP L+ WPF WGID+IG I P +S GHRFIL A DYF+K
Sbjct: 2560 KTCHGCQIHDNFKHQPPAPLHPTVPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYFSK 2619
Query: 548 WVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNS 607
W EA V V F++ +II R+GVP +I +DN + + E++KI+ + S
Sbjct: 2620 WAEAVPLREVKSSDVINFLERHIIYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWNYS 2679
Query: 608 SPYRPQMNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLV 666
+ Y PQ NG EA NK + +I++K V + +DWH+ L AL YR TVR+ T ATP+SLV
Sbjct: 2680 TGYYPQANGMAEAFNKTLGKILKKTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYSLV 2739
Query: 667 YGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKT 726
YG EAVLPLE+++PSLRV + +L++ E + R+ +L+ +EE+R+ A+ + Y+ M
Sbjct: 2740 YGNEAVLPLEIQLPSLRVAIHDELTKDEQIRLRFQELDAVEEERLGALQNLELYRQNMVR 2799
Query: 727 AFDKKVHPREFKVGE--LVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDG 784
A+DK V R F+ GE LVL+R + +GK+ P +EGPYV+++A+ GGA L G
Sbjct: 2800 AYDKLVKQRVFRKGELVLVLRRPIVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDHQG 2859
Query: 785 VELPNPVNADIVKKYF 800
+ P+N +KKYF
Sbjct: 2860 SQPMPPINGRFLKKYF 2875
>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
Length = 1814
Score = 516 bits (1329), Expect = e-144
Identities = 235/326 (72%), Positives = 285/326 (87%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
L KNQ I WND+CQ+AFD IK YL +PPIL PPV GRPLI+YLSV + S+GCVLGQ DE+
Sbjct: 1488 LRKNQAIKWNDDCQKAFDKIKEYLQKPPILTPPVPGRPLIMYLSVTENSMGCVLGQHDES 1547
Query: 79 GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
G+KEHAIYYLSKKFTDCETRY++L KTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIF
Sbjct: 1548 GRKEHAIYYLSKKFTDCETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIF 1607
Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
EK +TG++ARWQM+L+EYDI + +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMY
Sbjct: 1608 EKPALTGRVARWQMILTEYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMY 1667
Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTN 258
LK KDCEEPL++EGPDP+ KW L+FDGAVN G G+GAV+++ +G HIPF+AR+ F+ TN
Sbjct: 1668 LKVKDCEEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKGAHIPFSARLTFDVTN 1727
Query: 259 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTY 318
N AEYEACI GIEEAID+RIK LDIYGDSALV+NQ+ G+W T+ LIPYRDY RR+LT+
Sbjct: 1728 NEAEYEACIMGIEEAIDLRIKTLDIYGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTF 1787
Query: 319 FTKVELHHIPRDENQMADALATLSSM 344
F KV L+H+PRDENQMADALATLSSM
Sbjct: 1788 FKKVRLYHVPRDENQMADALATLSSM 1813
>UniRef100_Q93Y69 Putative gag-pol [Oryza sativa]
Length = 1262
Score = 510 bits (1314), Expect = e-143
Identities = 278/728 (38%), Positives = 414/728 (56%), Gaps = 31/728 (4%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
+ K P W+ ECQ FDSIK YLL PIL PV+GRPLILY++ SVG +L Q ++
Sbjct: 551 MKKGAPFEWDAECQSGFDSIKRYLLNLPILAAPVKGRPLILYIATQPVSVGALLAQHNDE 610
Query: 79 GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
GK E A YYLS+ E Y+ + K C AL +A K+LRHY++ H LI+ +DPI+Y+
Sbjct: 611 GK-EVACYYLSRTMVGAERNYSPIEKLCLALIFALKKLRHYMLTHQIQLIATVDPIRYVL 669
Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
+ ++ G++ +W +L+ E+DI + QKA+KG LA+ LA P+ D P+ + PDE++
Sbjct: 670 SQPLLAGRLGKWALLMMEFDITYVPQKAVKGQALAEFLAAHPVPDDSPLITELPDEDVFT 729
Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGK---------GIGAVIVSLQGHHIPFT 249
+++ EP W L FDGA G G V + QG I +
Sbjct: 730 IET----EP----------SWELCFDGASRTENDRDGTPRKRAGAGLVFKTPQGGVIYHS 775
Query: 250 ARILFE-CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPY 308
+L E C+NN AEYEA IFG+ A+ M ++ + +YGDS L++ QI +E +L+PY
Sbjct: 776 FSLLKEECSNNEAEYEALIFGLLLALSMEVRSIRVYGDSQLIVQQINDIYEVLKQELVPY 835
Query: 309 RDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVF 368
ARRL+ F +E+ H+PR N ADALA L++ + + +R P+ +
Sbjct: 836 YSAARRLMEMFGHIEVMHVPRSRNAPADALAKLAAALVLPQGGPTQVNVEERWLLPAVLE 895
Query: 369 AIGDV--IDQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDIL 426
+ + +D W + P + +++ L+R ++ +
Sbjct: 896 LLPNEYEVDTVMAAAAKEDDWRVPFLNYFRHGSLPDNSV--ERRQLQRRLPSYVYKSGVS 953
Query: 427 YKRNYDM-VLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQ 485
Y+R+Y VLLRCVD EA++ + +VH G G H +G M + AGYYW + DC +
Sbjct: 954 YRRSYGQEVLLRCVDRLEADKALQEVHHGVCGGHQSGPKMYHSIRLAGYYWPEIMADCLK 1013
Query: 486 HARKCHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYF 545
A+ CH CQI+ D H+PP L+ WPF WGID+IG I+P +S GHRFI DYF
Sbjct: 1014 VAKSCHGCQIHGDFKHLPPVPLHPTVPAWPFEAWGIDVIGPIDPPSSRGHRFIFAITDYF 1073
Query: 546 TKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHH 605
+KW EA S V V F++ +II R+GVP +I +DNG ++ +Q ++KI +
Sbjct: 1074 SKWAEAVSLREVKTDNVISFLERHIIYRFGVPHRISSDNGKAFKSHKMQRFIAKYKIRWN 1133
Query: 606 NSSPYRPQMNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFS 664
S+ Y PQ NG +EA NK + +I++K+V + +DWH+ L AL YR TVR+ T TP+S
Sbjct: 1134 YSTGYYPQANGMIEAFNKTLGKILKKVVNRHRRDWHDHLFEALWAYRVTVRTPTQCTPYS 1193
Query: 665 LVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARM 724
LVYG EAVLPLEVE+PSLRV + ++++ E + R+ +L+ +EE R+ A+ + Y+ M
Sbjct: 1194 LVYGSEAVLPLEVEVPSLRVAIHEEITQDEQVRLRFQELDTLEEGRLQAVQNLELYRQNM 1253
Query: 725 KTAFDKKV 732
A++K V
Sbjct: 1254 VRAYNKLV 1261
>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
Length = 1580
Score = 468 bits (1203), Expect = e-130
Identities = 272/785 (34%), Positives = 419/785 (52%), Gaps = 61/785 (7%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
L +Q W E Q+A D+IK YL PP+L+PP +G P LYLS D+S+ VL Q+ E
Sbjct: 847 LKADQQFAWGAEQQKALDNIKEYLSSPPVLIPPQKGIPFRLYLSAGDKSISSVLIQELE- 905
Query: 79 GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
+KE ++YLS++ + ETRY+ + K C L ++ RLRHYL+++ +I + D +KY+
Sbjct: 906 -RKERVVFYLSRRLLNAETRYSPVEKLCLCLYFSCTRLRHYLLSNECTVICKADVVKYML 964
Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
++ G+I +W L+E+D+ +++ KAIKG +A+ + D+ D+ I
Sbjct: 965 SAPILKGRIGKWIFSLTEFDLRYESPKAIKGQAIANFIV------------DYRDDSI-- 1010
Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTN 258
G W L FDG+V +G GIG VI+S +G F I TN
Sbjct: 1011 -------------GSVEVVPWTLFFDGSVCTHGCGIGLVIISPRGACFEFAYTIKPYATN 1057
Query: 259 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTY 318
N AEYEA + G++ ++ ++I GDS LVI+Q+ GE+E + LI Y + + L+
Sbjct: 1058 NQAEYEAVLKGLQLLKEVEADTIEIMGDSLLVISQLAGEYECKNDTLIVYNEKCQELMRE 1117
Query: 319 FTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAG 378
F V L H+ R++N A+ LA +S +++ +IK ++E
Sbjct: 1118 FRLVTLKHVSREQNIEANDLAQGASGYKL-------MIKHVQIEVA-------------- 1156
Query: 379 ENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRC 438
V+ W Y + Q+L S+ + LR A +++L D LY R D VLL+C
Sbjct: 1157 --VITADDWRYYVYQYL------QDPSQSASRKLRYKALKYILLDDELYYRTIDGVLLKC 1208
Query: 439 VDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYAD 498
+ +A+ + +VH+G GTH + H M L AGY+W M DC+++ + C CQ +
Sbjct: 1209 LSTDQAKVAIGEVHEGICGTHQSAHKMKWLLRCAGYFWPTMLEDCFRYYKGCQDCQKFGA 1268
Query: 499 KIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVT 558
P A+N I PWPF WGIDMIG I P +S GH+FILVA DYFTKWVEA V
Sbjct: 1269 IQRAPASAMNPIIKPWPFRGWGIDMIGMINPPSSKGHKFILVATDYFTKWVEAIPLKKVD 1328
Query: 559 KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAV 618
+F++ +II R G+P I TD G+ ++ + I+ NSSPY Q NG
Sbjct: 1329 SGDAIQFVQEHIIYRVGIPQTITTDQGSIFVSDEFIQFADSMGIKLLNSSPYYAQANGQA 1388
Query: 619 EAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 677
EA+NK++ +++++ ++ Y + WH L AL YR S P+ LVY +A+LP EV
Sbjct: 1389 EASNKSLIKLIKRKISDYPRQWHTRLAEALWSYRMACHGSIQVPPYKLVYRHKAILPWEV 1448
Query: 678 EIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREF 737
I S R ++ L+ E+ D+ + + R+ A+A+ + R+ ++KKV P++F
Sbjct: 1449 RIGSRRTELQNDLTADEYSNLMADEREDLVQSRLRALAKVIKDKERVTRHYNKKVVPKDF 1508
Query: 738 KVGELVLK--RRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADI 795
GEL+ K + + GKW+PN+EGP+ + K S GA +L +DG +N
Sbjct: 1509 SEGELIWKLILPIGTRDSKFGKWSPNWEGPFQIHKVVSKGAYMLQGLDGEVYDRALNGKY 1568
Query: 796 VKKYF 800
+KKY+
Sbjct: 1569 LKKYY 1573
>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
Length = 1027
Score = 453 bits (1165), Expect = e-125
Identities = 269/776 (34%), Positives = 414/776 (52%), Gaps = 39/776 (5%)
Query: 27 WNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDETGKKEHAIY 86
W D CQ A + IK+YL++PPIL P+ L +YL+V + ++ VL + K++ IY
Sbjct: 288 WTDNCQNALERIKHYLMQPPILSSPIPKEKLYMYLAVSEWAISAVLFRCPSP-KEQKPIY 346
Query: 87 YLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAVVTGK 146
Y+S+ D ETRY+ + AL AA++LR Y H +++ P++ I K +TG+
Sbjct: 347 YVSRALADVETRYSKMELISLALRSAAQKLRPYFQAHPVIVLTDQ-PLRNILHKPDLTGR 405
Query: 147 IARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEE 206
+ +W + LSE+ I F+ + ++KG ++AD + +E+ +
Sbjct: 406 MLQWAIELSEFGIEFQPRLSMKGQVMADFV----------LEYS--------------RK 441
Query: 207 PLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTNNMAEYEAC 266
P EG W L DGA + G G+G ++ S G H+ R+ F +NN AEYEA
Sbjct: 442 PGQHEGSRKKEWWTLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAI 501
Query: 267 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHH 326
+ G++ A+ + + L I+ DS LV+ ++ E+E A++ Y R L FT+ +
Sbjct: 502 LSGLDLALALSVSKLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEK 561
Query: 327 IPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQAGENVVDYKP 386
I R +N+ ADALA +++ + +PI VQ S + + D +
Sbjct: 562 IKRADNRRADALAGIAASLSIKEAILLPI-HVQTNPSVSEI----SICSTTEAPQADDQE 616
Query: 387 WYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQ 446
W DI +++ + P G KQ K +R A+RF L G LYKR++ LRC+ EA+
Sbjct: 617 WMNDITEYIRTGTLP-GDPKQAHK-VRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEAQY 674
Query: 447 LMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHA 506
++ ++H+G +G H+ G +++ + GYYW M+ + + ++C KCQ YA H+P
Sbjct: 675 VLAELHEGIYGNHSGGRSLAHRAHSQGYYWPTMKKEAAAYVKRCDKCQRYAPIPHMPSTT 734
Query: 507 LNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFI 566
L IS PWPF+ WG+D++ R P A +F+LVA DYF+KWVEA +Y + + V KF+
Sbjct: 735 LKSISGPWPFAQWGMDIV-RPLPTAPAQKKFLLVATDYFSKWVEAEAYASTKDKDVTKFV 793
Query: 567 KNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIK 626
NIICR+G+P II DNG ++ + C E I + S+P PQ NG EA NK +
Sbjct: 794 WKNIICRFGIPQTIIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLI 853
Query: 627 RIVQKMVTTYK-DWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVI 685
++K + K W E LP L YRTT TG TPF+L YGM+AV+P+E+ +P++
Sbjct: 854 TALKKRLEQAKGKWVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPIEIGLPTIWT- 912
Query: 686 MEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLK 745
AK S+A R L+ +E R A R YQ R +++KV PR K G LVL+
Sbjct: 913 NAAKQSDANMQLGR--NLDWTDEVRESASIRMADYQQRASAHYNRKVRPRSLKNGTLVLR 970
Query: 746 RRVSQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 800
+ + GK+ N+EGPY+V KA GA L +DG L P N +K+Y+
Sbjct: 971 KFFENTTEVGAGKFQANWEGPYIVSKASDNGAYHLQKLDGTPLLRPWNVSNLKQYY 1026
>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 424 bits (1089), Expect = e-117
Identities = 272/793 (34%), Positives = 405/793 (50%), Gaps = 49/793 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
L + W+ + +EAF+ +K+YL PPILV P G L LY++V D +V VL ++D
Sbjct: 1083 LKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRG 1142
Query: 79 GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
++ I+Y SK + ETRY ++ K A+ +A++LR Y +HT +++ P++
Sbjct: 1143 --EQRPIFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQ-PLRVAL 1199
Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
+G++ +W + LSEYDI F+ + A+K +LAD L PL + EE
Sbjct: 1200 HSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPLQSAERAVSGNRGEE--- 1256
Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTN 258
W L DG+ +A G GIG +VS + + R+ F TN
Sbjct: 1257 --------------------WSLYVDGSSSARGSGIGIRLVSPTAEVLEQSFRLRFVATN 1296
Query: 259 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTY 318
N+AEYE I G+ A M+I + + DS L+ Q+ GE+E + K+ Y + +
Sbjct: 1297 NVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQLSGEYEAKNEKMDAYLKIVQLMTKD 1356
Query: 319 FTKVELHHIPRDENQMADALATLSSMFRVNHWNDVP-IIKVQRLERPS-----HVFAIGD 372
F +L IPR +N ADALA L+ + +D+ II V+ +++PS V +
Sbjct: 1357 FENFKLSKIPRGDNAPADALAALA----LTSDSDLRRIIPVESIDKPSIDSTDAVEIVNT 1412
Query: 373 VIDQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRL---ASRFLLDGDILYKR 429
+ + D W +I+ +L PS DK T RRL A+++ L + L K
Sbjct: 1413 IRSSNAPDPADPTDWRVEIRDYLSDGTLPS-----DKWTARRLRIKAAKYTLMKEHLLKV 1467
Query: 430 NYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARK 489
+ +L C+ E ++M + H+G G H+ G ++ KL + G+YW M DC K
Sbjct: 1468 SAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRALALKLKKLGFYWPTMISDCKTFTAK 1527
Query: 490 CHKCQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWV 549
C +CQ +A IH P L +P+PF W +D++G + AS RFILV DYFTKWV
Sbjct: 1528 CEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVGPMP--ASRQKRFILVMTDYFTKWV 1585
Query: 550 EAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSP 609
EA SY + V F+ IICR+G+P +IITDNG+ + + C +KI + S+P
Sbjct: 1586 EAESYATIRANDVQNFVWKFIICRHGLPYEIITDNGSQFISLSFENFCASWKIRLNKSTP 1645
Query: 610 YRPQMNGAVEAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYG 668
PQ NG EA NK I ++K + K W + L L YRTT RS+T TPF+ YG
Sbjct: 1646 RYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELDGVLWSYRTTPRSATDQTPFAHAYG 1705
Query: 669 MEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAF 728
MEA+ P EV SLR M K E + D+L+ +EE R A+ R Q+YQ +
Sbjct: 1706 MEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHY 1764
Query: 729 DKKVHPREFKVGELVLKRRVSQQPD-PRGKWTPNYEGPYVVKKAFSGGALILTHMDGVEL 787
++KVH R F VG+LVL++ + GK N+EG Y V K G L M G +
Sbjct: 1765 NQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWEGSYQVSKIVRPGDYELLTMSGTAV 1824
Query: 788 PNPVNADIVKKYF 800
P N+ +K+Y+
Sbjct: 1825 PRTWNSMHLKRYY 1837
>UniRef100_Q40580 Integrase [Nicotiana tabacum]
Length = 382
Score = 423 bits (1088), Expect = e-117
Identities = 196/342 (57%), Positives = 263/342 (76%), Gaps = 2/342 (0%)
Query: 459 HATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIYADKIHVPPHALNVISSPWPFSM 518
H G +S+K+LRAGY+WM ME DC ++ +KCH+CQIYAD + VPP+ LN S+PWPF+
Sbjct: 26 HMNGFVLSKKILRAGYFWMTMETDCIRYVQKCHQCQIYADMMRVPPNKLNATSAPWPFAA 85
Query: 519 WGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPS 578
WG+D+IG IEP ASN H+FILVAIDYFTKWVEAASY VTK+VV F+++ I+CR+ VP
Sbjct: 86 WGMDIIGPIEPTASNWHKFILVAIDYFTKWVEAASYKVVTKKVVTDFVRDCIVCRFEVPE 145
Query: 579 KIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKD 638
IITDN NL++ +++A+C+ FKI+H NS+ Y PQMNG VEAANKNIK+I++KMV +K+
Sbjct: 146 SIITDNAANLHSALMKAMCDTFKIKHKNSTAYMPQMNGVVEAANKNIKKILRKMVDNHKE 205
Query: 639 WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQS 698
WHE LP+AL GY T V +S GATP+ LVY EAV+ +EVEI SLR+I E LS+AEW +S
Sbjct: 206 WHEKLPFALLGYCTIVCTSIGATPYLLVYSTEAVIHVEVEITSLRIIQEDVLSDAEWIRS 265
Query: 699 RYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKRRVSQQPDPRGKW 758
RY+QL+LI+ KR+ + GQ Y RM AF+K+V PR+F G+LVLKR Q + +GK+
Sbjct: 266 RYEQLSLIDGKRV--VCHGQLYHNRMSRAFNKRVKPRQFASGQLVLKRIFPHQDEAKGKF 323
Query: 759 TPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 800
+PN++GPY+V + +GG LIL +DG P P+N+D+VK+Y+
Sbjct: 324 SPNWQGPYMVHRVLTGGTLILAEIDGEVWPKPINSDVVKRYY 365
>UniRef100_Q7XNV9 OSJNBb0015G09.7 protein [Oryza sativa]
Length = 1991
Score = 412 bits (1059), Expect = e-113
Identities = 259/792 (32%), Positives = 393/792 (48%), Gaps = 48/792 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +++E
Sbjct: 1239 LKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1298
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1299 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1357
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1358 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1412
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
+ + W + FDG+ G G G V++S G + + I F
Sbjct: 1413 NMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1452
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IKHL + GDS LV+NQ+ EW ++ YR R+
Sbjct: 1453 SASHNVAEYEALLHGLRIAISLGIKHLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1512
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R N+ AD LA S R +DV V+ L P+ +
Sbjct: 1513 LEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYSPTVPHKDATQV 1568
Query: 375 DQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMV 434
+ + W + +FL S+E P K + + + R + ++L LYK++ +
Sbjct: 1569 AGTHDVAMVEADWRESLIRFLTSQELPQ--DKDEAERISRRSKLYVLHEAELYKKSPSGI 1626
Query: 435 LLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQ 494
L RCV E QL+ D+H G G HA T+ K R G++W D + R C CQ
Sbjct: 1627 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1686
Query: 495 IYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 554
+A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1687 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 1745
Query: 555 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 614
+T F +I+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 1746 VTITADNARDFF-ISIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMS 1804
Query: 615 NGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 669
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVYG
Sbjct: 1805 NGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGA 1864
Query: 670 EAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFD 729
EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++ +
Sbjct: 1865 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHN 1921
Query: 730 KKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 789
+ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG + N
Sbjct: 1922 RNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 1979
Query: 790 PVNADIVKKYFA 801
N + +++++A
Sbjct: 1980 SWNIEHLRRFYA 1991
>UniRef100_Q5U6F6 Orf764 protein [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 411 bits (1057), Expect = e-113
Identities = 255/787 (32%), Positives = 418/787 (52%), Gaps = 56/787 (7%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
L N+ W +E + AF +IK +L + P + P EG L LY+S ++V VL E
Sbjct: 28 LRGNKTFTWGEEERTAFAAIKEHLKKLPTVTRPKEGERLQLYISASPKTVAAVL--LVER 85
Query: 79 GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
K + IY++S + E RY +L K A+ AA++LR Y HT ++S P++
Sbjct: 86 IKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSN-HPLEKAL 144
Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
+K +G++ RW + LSE+++ +K + AIK LAD + +E + +EE
Sbjct: 145 QKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI----------VEASYEEEE--- 191
Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTN 258
+P W L DG+ G G G ++ S +G+ F I F+ +N
Sbjct: 192 ---------------EPVGVWKLAVDGSAAQTGSGAGIIMTSPEGN--VFEYAIKFKASN 234
Query: 259 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTY 318
N AEYEA I GI+ + K + + DS LV +QI+GE+E + Y + L
Sbjct: 235 NEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLAAQ 294
Query: 319 FTKVELHHIPRDENQMADALATLSS--MFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQ 376
+E+ +PR +N ADAL+ L+S + +N V +++ + +++ +
Sbjct: 295 LISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINC------- 347
Query: 377 AGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLL 436
V K WY DI+++ L+ + P + K ++R + +++ LYKR+ LL
Sbjct: 348 ----VTAQKEWYDDIQEYKLTGKLPD--DQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLL 401
Query: 437 RCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIY 496
RC E E M + +G G H G +S +++R G YW M DC ++ +KC KCQ +
Sbjct: 402 RCTSESEKLPAMEEAPEGICGNHIGGKALSHEVMRRGNYWPTMVKDCLRYVKKCDKCQKF 461
Query: 497 ADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTN 556
A ++ P + L I +P PF+ WG+D++G AS G ++++VA+DYFTKW+EA
Sbjct: 462 APVMNQPANDLCPILNPIPFAQWGMDILGPFTT-ASGGRKYLIVAVDYFTKWIEAEPTKF 520
Query: 557 VTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNG 616
+ + V FI NII R+G+P I+ D+GT + + ++ C EFKI+ +++ PQ NG
Sbjct: 521 IKARQVRSFIWKNIITRFGIPQCIVFDHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNG 580
Query: 617 AVEAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPL 675
EAANK I +QK + +K W +++P L RTT + +TG +PFSL +G EAV+P+
Sbjct: 581 QAEAANKQILLALQKKLEEHKGLWADLVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPI 640
Query: 676 EVEIPSLRV-IMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHP 734
EV +PS RV + +++E Q + L+ + E R+ A + + + RM ++++V
Sbjct: 641 EVGLPSFRVQHYDPEVNE----QLMREALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRH 696
Query: 735 REFKVGELVLKRRVS-QQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNA 793
R G+LVL+R + + + GK+T N+EGPY + + + G+ L ++G L N NA
Sbjct: 697 RPLTEGDLVLRRTAAVGKGNVHGKFTANWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNA 756
Query: 794 DIVKKYF 800
D++KKYF
Sbjct: 757 DVLKKYF 763
>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
Length = 2013
Score = 411 bits (1056), Expect = e-113
Identities = 260/792 (32%), Positives = 393/792 (48%), Gaps = 48/792 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +++E
Sbjct: 1261 LKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1320
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1321 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1379
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I V G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1380 GDILHNREVNGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1434
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
+ + W + FDG+ G G G V++S G + + I F
Sbjct: 1435 NMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1474
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW ++ YR R+
Sbjct: 1475 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSYLDDNMMAYRQEVRK 1534
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R N+ AD LA S R +DV V+ L P+ +
Sbjct: 1535 LEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYTPTVPHKDTTQV 1590
Query: 375 DQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMV 434
+ + W + +FL S+E P K + + + R + ++L LYK++ +
Sbjct: 1591 AGTHDAAMVEVDWREPLIRFLTSQELPQ--DKDEAERISRRSKLYVLHEAELYKKSPSGI 1648
Query: 435 LLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQ 494
L RCV E QL+ D+H G G HA T+ K R G++W D + R C CQ
Sbjct: 1649 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1708
Query: 495 IYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 554
+A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1709 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 1767
Query: 555 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 614
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 1768 VTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMS 1826
Query: 615 NGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 669
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVYG
Sbjct: 1827 NGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGA 1886
Query: 670 EAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFD 729
EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++ +
Sbjct: 1887 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHN 1943
Query: 730 KKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 789
+ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG + N
Sbjct: 1944 RNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 2001
Query: 790 PVNADIVKKYFA 801
N + +++++A
Sbjct: 2002 SWNIEHLRRFYA 2013
>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
Length = 2012
Score = 410 bits (1055), Expect = e-113
Identities = 260/792 (32%), Positives = 392/792 (48%), Gaps = 48/792 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +++E
Sbjct: 1260 LKKTDSFRWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1319
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1320 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1378
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1379 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1433
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
+ + W + FDG+ G G G V++S G + + I F
Sbjct: 1434 NMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1473
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW ++ YR R+
Sbjct: 1474 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1533
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R N+ AD LA S R +DV V+ L P+
Sbjct: 1534 LEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYSPTVPHKDATQA 1589
Query: 375 DQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMV 434
A + + W + +FL S+E P K + + + R + ++L LYK++ +
Sbjct: 1590 AGAHDVAMVEADWREPLIRFLTSQELPQ--DKDEAERISRRSKLYVLHEAELYKKSPSGI 1647
Query: 435 LLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQ 494
L RCV E QL+ D+H G G HA T+ K R G++W D + R C CQ
Sbjct: 1648 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1707
Query: 495 IYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 554
+A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1708 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 1766
Query: 555 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 614
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 1767 VTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMS 1825
Query: 615 NGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 669
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVYG
Sbjct: 1826 NGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTSSRATGQSPFFLVYGA 1885
Query: 670 EAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFD 729
EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++ +
Sbjct: 1886 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHN 1942
Query: 730 KKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 789
+ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG + N
Sbjct: 1943 RNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 2000
Query: 790 PVNADIVKKYFA 801
N + +++++A
Sbjct: 2001 SWNIEHLRRFYA 2012
>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
Length = 2010
Score = 410 bits (1055), Expect = e-113
Identities = 260/794 (32%), Positives = 393/794 (48%), Gaps = 52/794 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +++E
Sbjct: 1258 LKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1317
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1318 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1376
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1377 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1431
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
+ + W + FDG+ G G G V++S G + + I F
Sbjct: 1432 NMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1471
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW ++ YR R+
Sbjct: 1472 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1531
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R N+ AD LA S V + + V+ L P+ D
Sbjct: 1532 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHK--DTT 1585
Query: 375 DQAGENVVDY--KPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYD 432
AG + V W + +FL S+E P K + + + R + +++ LYK++
Sbjct: 1586 QVAGTHDVAMVETDWREPLIRFLTSQELPQ--DKDEAERISRRSKLYVMHEAELYKKSPS 1643
Query: 433 MVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHK 492
+L RCV E QL+ D+H G G HA T+ K R G++W D + R C
Sbjct: 1644 GILQRCVSLEEGRQLLQDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEG 1703
Query: 493 CQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAA 552
CQ +A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1704 CQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAK 1762
Query: 553 SYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRP 612
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 1763 PVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHP 1821
Query: 613 QMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVY 667
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVY
Sbjct: 1822 MSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVY 1881
Query: 668 GMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTA 727
G EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++
Sbjct: 1882 GAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRY 1938
Query: 728 FDKKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVEL 787
++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG +
Sbjct: 1939 HNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLV 1996
Query: 788 PNPVNADIVKKYFA 801
N N + +++++A
Sbjct: 1997 DNSWNIEHLRRFYA 2010
>UniRef100_Q9MFD2 Orf764 protein [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 410 bits (1055), Expect = e-113
Identities = 255/787 (32%), Positives = 418/787 (52%), Gaps = 56/787 (7%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLGQQDET 78
L N+ W +E + AF +IK +L + P + P EG L LY+S ++V VL E
Sbjct: 28 LRGNKTFKWGEEERTAFAAIKEHLKKLPTVTRPKEGERLQLYISASPKTVAAVL--LVER 85
Query: 79 GKKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIF 138
K + IY++S + E RY +L K A+ AA++LR Y HT ++S P++
Sbjct: 86 IKTQLPIYFVSHVLNEAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSN-HPLEKAL 144
Query: 139 EKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMY 198
+K +G++ RW + LSE+++ +K + AIK LAD + +E + +EE
Sbjct: 145 QKLDTSGRLLRWAVELSEFEVEYKPRTAIKAQALADFI----------VEASYEEEE--- 191
Query: 199 LKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILFECTN 258
+P W L DG+ G G G ++ S +G+ F I F+ +N
Sbjct: 192 ---------------EPVGVWKLAVDGSAAQTGSGAGIIMTSPEGN--VFEYAIKFKASN 234
Query: 259 NMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTY 318
N AEYEA I GI+ + K + + DS LV +QI+GE+E + Y + L
Sbjct: 235 NEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQKYLQMIKDLAAQ 294
Query: 319 FTKVELHHIPRDENQMADALATLSS--MFRVNHWNDVPIIKVQRLERPSHVFAIGDVIDQ 376
+E+ +PR +N ADAL+ L+S + +N V +++ + +++ +
Sbjct: 295 LISLEVVLVPRADNSQADALSKLASSTLQDLNRTVMVEVMEQRSIDKAERINC------- 347
Query: 377 AGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLL 436
V K WY DI+++ L+ + P + K ++R + +++ LYKR+ LL
Sbjct: 348 ----VTAQKEWYDDIQEYKLTGKLPD--DQTIAKAVKRDSHWYIIYQGQLYKRSDSYPLL 401
Query: 437 RCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQIY 496
RC E E M + +G G H G +S +++R G YW M DC ++ +KC KCQ +
Sbjct: 402 RCTSESEKLPAMEEAPEGICGNHIGGKALSHEVMRRGNYWPTMVKDCLRYVKKCDKCQKF 461
Query: 497 ADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTN 556
A ++ P + L I +P PF+ WG+D++G AS G ++++VA+DYFTKW+EA
Sbjct: 462 APVMNQPANDLCPILNPIPFAQWGMDILGPFTT-ASGGRKYLIVAVDYFTKWIEAEPTKF 520
Query: 557 VTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNG 616
+ + V FI NII R+G+P I+ D+GT + + ++ C EFKI+ +++ PQ NG
Sbjct: 521 IKARQVRSFIWKNIITRFGIPQCIVFDHGTQFDCDTIKDYCAEFKIKFASAAVCHPQSNG 580
Query: 617 AVEAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPL 675
EAANK I +QK + +K W +++P L RTT + +TG +PFSL +G EAV+P+
Sbjct: 581 QAEAANKQILLALQKKLEEHKGLWADLVPEVLWANRTTEKGATGKSPFSLAFGAEAVVPI 640
Query: 676 EVEIPSLRV-IMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHP 734
EV +PS RV + +++E Q + L+ + E R+ A + + + RM ++++V
Sbjct: 641 EVGLPSFRVQHYDPEVNE----QLMREALDQLPEMRLQAALKLAAQKNRMSRIYNRRVRH 696
Query: 735 REFKVGELVLKRRVS-QQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNA 793
R G+LVL+R + + + GK+T N+EGPY + + + G+ L ++G L N NA
Sbjct: 697 RPLTEGDLVLRRTAAVGKGNVHGKFTANWEGPYQICEQVAPGSYKLMTVEGEPLKNSFNA 756
Query: 794 DIVKKYF 800
D++KKYF
Sbjct: 757 DVLKKYF 763
>UniRef100_Q7XDS6 Putative gypsy-type retrotransposon [Oryza sativa]
Length = 1995
Score = 409 bits (1052), Expect = e-112
Identities = 259/794 (32%), Positives = 393/794 (48%), Gaps = 52/794 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +++E
Sbjct: 1243 LKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1302
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1303 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1361
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1362 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1416
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
++ + W + FDG+ G G G V++S G + + I F
Sbjct: 1417 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1456
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW ++ YR R+
Sbjct: 1457 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1516
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R N+ AD L S V + + V+ L P+ D
Sbjct: 1517 LEDKFDGLELSHVLRHNNEAADRLVNFGSKREVAPSD----VFVEHLYTPTVPHK--DTT 1570
Query: 375 DQAGENVVDY--KPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYD 432
AG + V W + +FL S+E P K + + + R + +++ LYK++
Sbjct: 1571 QAAGTHDVAMVEADWREPLIRFLTSQELPQ--DKDEAERISRRSKLYVMHEAELYKKSPS 1628
Query: 433 MVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHK 492
+L RCV E QL+ D+H G G HA T+ K R G++W D + R C
Sbjct: 1629 GILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEG 1688
Query: 493 CQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAA 552
CQ +A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1689 CQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAK 1747
Query: 553 SYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRP 612
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 1748 PVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHP 1806
Query: 613 QMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVY 667
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVY
Sbjct: 1807 MSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVY 1866
Query: 668 GMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTA 727
G EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++
Sbjct: 1867 GAEAMLPSEVEFESLRF---RNFHEDRYEEDRVDDLHRLEEVREAALIRSARYLQGLRRY 1923
Query: 728 FDKKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVEL 787
++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG +
Sbjct: 1924 HNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLV 1981
Query: 788 PNPVNADIVKKYFA 801
N N + +++++A
Sbjct: 1982 DNSWNIEHLRRFYA 1995
>UniRef100_Q9SSW6 GAG-POL [Oryza sativa]
Length = 1032
Score = 409 bits (1051), Expect = e-112
Identities = 258/792 (32%), Positives = 393/792 (49%), Gaps = 48/792 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +++E
Sbjct: 280 LKKTDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 339
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 340 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 398
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 399 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 453
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
++ + W + FDG+ G G G V++S G + + I F
Sbjct: 454 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 493
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW ++ YR R+
Sbjct: 494 STSHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 553
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R N+ AD LA S R +DV V+ L P+ +
Sbjct: 554 LEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYTPTVPHKDTTQV 609
Query: 375 DQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMV 434
+ + W + +FL S+E P K + + + R + +++ LYK++ +
Sbjct: 610 ADTHDIAMVEADWREPLIRFLTSQELPR--DKDEAERISRRSKLYVMHEAELYKKSPSGI 667
Query: 435 LLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQ 494
L RCV E QL+ D+H G G HA T+ K R G++W D + R C CQ
Sbjct: 668 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 727
Query: 495 IYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 554
+A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 728 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 786
Query: 555 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 614
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 787 VTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMS 845
Query: 615 NGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 669
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVYG
Sbjct: 846 NGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGA 905
Query: 670 EAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFD 729
EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++ +
Sbjct: 906 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHN 962
Query: 730 KKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 789
+ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG + N
Sbjct: 963 RNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 1020
Query: 790 PVNADIVKKYFA 801
N + +++++A
Sbjct: 1021 SWNIEHLRRFYA 1032
>UniRef100_Q8RUA5 Putative gag-pol [Oryza sativa]
Length = 1964
Score = 409 bits (1050), Expect = e-112
Identities = 261/794 (32%), Positives = 397/794 (49%), Gaps = 52/794 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ +K L +PP+L P PL+LY+S + V VL +++E
Sbjct: 1212 LKKTDNFQWGPEAQKAFEDLKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1271
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1272 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1330
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
+ G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1331 GDVLHNREANGRIAKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVE 1385
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
+I + W + FDG+ G G G V++S G + + I F
Sbjct: 1386 KIEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1425
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW ++ YR R+
Sbjct: 1426 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRK 1485
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPS--HVFAIGD 372
L F +EL H+ R N+ AD LA S R +DV V+ L P+ H D
Sbjct: 1486 LEDKFDGLELSHVLRHNNEAADRLANFGSK-RETAPSDV---FVEHLYTPTVPHKDTTQD 1541
Query: 373 VIDQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYD 432
D +V+ W +FL S+E P K + + + R + ++L LYK++
Sbjct: 1542 A-DTRDIAMVE-ADWREPFIRFLTSQELPQ--DKDEAERISRRSKLYVLHESELYKKSPS 1597
Query: 433 MVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHK 492
+L RCV E QL+ D+H G G HA T+ K R G++W D + R C
Sbjct: 1598 GILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEG 1657
Query: 493 CQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAA 552
CQ +A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1658 CQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAK 1716
Query: 553 SYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRP 612
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 1717 PVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHP 1775
Query: 613 QMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVY 667
NG VE AN I R+ ++ + W + LP L RTT +TG +PF LVY
Sbjct: 1776 MSNGQVERANGMILQGIKARVFDRLKSYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVY 1835
Query: 668 GMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTA 727
G EA+LP EVE SLR E + + R D L+ +EE R A+ + Y ++
Sbjct: 1836 GAEAMLPSEVEFESLRF---RNFREERYGEDRVDDLHRLEEVREAALIQSARYLQGLRRY 1892
Query: 728 FDKKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVEL 787
++ V R F VG+LVL+R Q R K +P +EGP+++ + G+ L DG +
Sbjct: 1893 HNRNVRSRAFLVGDLVLRR--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLV 1950
Query: 788 PNPVNADIVKKYFA 801
N + + +++++A
Sbjct: 1951 DNSWHIEHLRRFYA 1964
>UniRef100_Q8LMM4 Putative gag-pol [Oryza sativa]
Length = 2017
Score = 408 bits (1048), Expect = e-112
Identities = 259/794 (32%), Positives = 391/794 (48%), Gaps = 52/794 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K L EPP+L P PL+LY+S + V VL +++E
Sbjct: 1265 LKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1324
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1325 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1383
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I G+IA+W + L D+ FK + +IK LAD +A
Sbjct: 1384 GDILHNREANGRIAKWALELMSLDLSFKPRISIKSQALADFVA----------------- 1426
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
+ +C+E D W + FDG+ G G G V++S G + + I F
Sbjct: 1427 -----EWTECQE---DTTVKKMEHWTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1478
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW + YR R+
Sbjct: 1479 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMKAYRQEVRK 1538
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R +N+ AD LA S V + + V+ L P+ D
Sbjct: 1539 LEDKFDGLELSHVLRHDNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHK--DTT 1592
Query: 375 DQAGENVVDY--KPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYD 432
AG + V W + +FL S+E P K + + + R + +++ LYK++
Sbjct: 1593 QAAGIHDVAMVETDWREPLIRFLTSQELPQ--DKDEAERISRRSKLYVMHEAELYKKSPS 1650
Query: 433 MVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHK 492
+L RCV E QL+ D+H G G HA T+ K R G++W D + R C
Sbjct: 1651 GILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEG 1710
Query: 493 CQIYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAA 552
CQ +A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1711 CQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAK 1769
Query: 553 SYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRP 612
+T F NI+ R+GVP++IITDNGT V + CE+F I+ +S P
Sbjct: 1770 PVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHP 1828
Query: 613 QMNGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVY 667
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVY
Sbjct: 1829 MSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVY 1888
Query: 668 GMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTA 727
G EA+LP EVE SLR E + + R D L+ +EE R A+ R Y ++
Sbjct: 1889 GAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRY 1945
Query: 728 FDKKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVEL 787
++ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG +
Sbjct: 1946 HNRNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLV 2003
Query: 788 PNPVNADIVKKYFA 801
N N + +++++A
Sbjct: 2004 DNSWNIEYLRRFYA 2017
>UniRef100_Q60DY3 Putative polyprotein [Oryza sativa]
Length = 1799
Score = 407 bits (1047), Expect = e-112
Identities = 255/792 (32%), Positives = 391/792 (49%), Gaps = 48/792 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K +L EPP+L P PL+LY+S + V VL +++E
Sbjct: 1047 LKKTDDFQWGPEAQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1106
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1107 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1165
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1166 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1220
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
++ + W + FDG+ G G G V++S G + + I F
Sbjct: 1221 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1260
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW ++ YR R+
Sbjct: 1261 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1320
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R N+ AD LA S V + + V+ L P+ I
Sbjct: 1321 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHKDTTQI 1376
Query: 375 DQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMV 434
+ + W +FL S+E P K + + + R + +++ LYK++ +
Sbjct: 1377 AGTHDVALVEADWREPFIRFLTSQELPQ--DKDEAERISRRSKLYVMHEAELYKKSPSGI 1434
Query: 435 LLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQ 494
L RCV E QL+ D+H G G HA T+ K R G++W D + R C CQ
Sbjct: 1435 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1494
Query: 495 IYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 554
+A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1495 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 1553
Query: 555 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 614
+T F NI+ R+GVP++IITDNG V + CE+F I+ +S P
Sbjct: 1554 VTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMS 1612
Query: 615 NGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 669
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVYG
Sbjct: 1613 NGQVERANGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGA 1672
Query: 670 EAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFD 729
EA+LP EVE SLR E + + R D L+ +EE R A+ + Y ++ +
Sbjct: 1673 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHN 1729
Query: 730 KKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 789
+ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG + N
Sbjct: 1730 RNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 1787
Query: 790 PVNADIVKKYFA 801
N + +++++A
Sbjct: 1788 SWNIEHLRRFYA 1799
>UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]
Length = 1756
Score = 407 bits (1047), Expect = e-112
Identities = 255/792 (32%), Positives = 391/792 (49%), Gaps = 48/792 (6%)
Query: 19 LSKNQPIVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLILYLSVFDESVGCVLG-QQDE 77
L K W E Q+AF+ K +L EPP+L P PL+LY+S + V VL +++E
Sbjct: 1004 LKKTDDFQWGPEAQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREE 1063
Query: 78 TG---KKEHAIYYLSKKFTDCETRYTMLAKTCCALAWAAKRLRHYLVNHTTWLISRMDPI 134
G K + IY++S+ D +TRY + K + ++L HY H+ +++ P+
Sbjct: 1064 EGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PL 1122
Query: 135 KYIFEKAVVTGKIARWQMLLSEYDIVFKAQKAIKGSILADHLAYQPLDDYQPIEFDFPDE 194
I G+IA+W + L DI FK + +IK LAD +A ++ + D P E
Sbjct: 1123 GDILHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAE 1177
Query: 195 EIMYLKSKDCEEPLIDEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSLQGHHIPFTARILF 254
++ + W + FDG+ G G G V++S G + + I F
Sbjct: 1178 KMEH--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHF 1217
Query: 255 ECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARR 314
++N+AEYEA + G+ AI + IK L + GDS LV+NQ+ EW ++ YR R+
Sbjct: 1218 SASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRK 1277
Query: 315 LLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPIIKVQRLERPSHVFAIGDVI 374
L F +EL H+ R N+ AD LA S V + + V+ L P+ I
Sbjct: 1278 LEDKFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHKDTTQI 1333
Query: 375 DQAGENVVDYKPWYYDIKQFLLSREYPSGASKQDKKTLRRLASRFLLDGDILYKRNYDMV 434
+ + W +FL S+E P K + + + R + +++ LYK++ +
Sbjct: 1334 AGTHDVALVEADWREPFIRFLTSQELPQ--DKDEAERISRRSKLYVMHEAELYKKSPSGI 1391
Query: 435 LLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQHARKCHKCQ 494
L RCV E QL+ D+H G G HA T+ K R G++W D + R C CQ
Sbjct: 1392 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1451
Query: 495 IYADKIHVPPHALNVISSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 554
+A +IH+P L I WPF++WG+DM+G + KA G+ + VAID F+KW+EA
Sbjct: 1452 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 1510
Query: 555 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 614
+T F NI+ R+GVP++IITDNG V + CE+F I+ +S P
Sbjct: 1511 VTITADNARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMS 1569
Query: 615 NGAVEAANKNI-----KRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 669
NG VE AN I R+ ++ W + LP L RTT +TG +PF LVYG
Sbjct: 1570 NGQVERANGMILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGA 1629
Query: 670 EAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFD 729
EA+LP EVE SLR E + + R D L+ +EE R A+ + Y ++ +
Sbjct: 1630 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHN 1686
Query: 730 KKVHPREFKVGELVLKRRVSQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 789
+ V R F VG+LVL++ Q R K +P +EGP+++ + G+ L DG + N
Sbjct: 1687 RNVRSRAFLVGDLVLRK--IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 1744
Query: 790 PVNADIVKKYFA 801
N + +++++A
Sbjct: 1745 SWNIEHLRRFYA 1756
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,398,444,184
Number of Sequences: 2790947
Number of extensions: 60348138
Number of successful extensions: 134993
Number of sequences better than 10.0: 4608
Number of HSP's better than 10.0 without gapping: 3881
Number of HSP's successfully gapped in prelim test: 728
Number of HSP's that attempted gapping in prelim test: 122667
Number of HSP's gapped (non-prelim): 7087
length of query: 801
length of database: 848,049,833
effective HSP length: 136
effective length of query: 665
effective length of database: 468,481,041
effective search space: 311539892265
effective search space used: 311539892265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)
Medicago: description of AC140025.16