BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.7 - phase: 0
(46 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q5ZD68 Hypothetical protein P0030H07.11 [Oryza sativa] 37 0.18
UniRef100_Q9LDW9 EST C28952(C62945) corresponds to a region of t... 33 1.6
UniRef100_Q9LDE7 EST C28952(C62945) corresponds to a region of t... 33 1.6
UniRef100_Q9FW81 Mutator-like transposase [Oryza sativa] 33 1.6
UniRef100_Q947Y7 Putative mutator-like transposase [Oryza sativa] 33 1.6
UniRef100_Q8SB37 Putative transposon protein [Oryza sativa] 33 1.6
UniRef100_Q8S9Y0 Putative mutator-liketransposase [Oryza sativa] 33 1.6
UniRef100_Q8S5Y6 Putative transposase related protein [Oryza sat... 33 1.6
UniRef100_Q8LR53 Putative mutator-like transposase [Oryza sativa] 33 1.6
UniRef100_Q8LN97 Putative Mu transposable element [Oryza sativa] 33 1.6
UniRef100_Q8H904 Putative transposase [Oryza sativa] 33 1.6
UniRef100_Q84SN6 Putative mutator-like transposase [Oryza sativa] 33 1.6
UniRef100_Q84R42 Putative mutator-like transposase [Oryza sativa] 33 1.6
UniRef100_Q7Y178 Putative mutator-like transposase [Oryza sativa] 33 1.6
UniRef100_Q7XN59 OSJNBa0089N06.23 protein [Oryza sativa] 33 1.6
UniRef100_Q7XE00 Putative mutator protein [Oryza sativa] 33 1.6
UniRef100_Q69MM8 Hypothetical protein P0489D11.15 [Oryza sativa] 33 1.6
UniRef100_Q60DM8 MuDR family transposase domain containing prote... 33 1.6
UniRef100_Q6L487 Putative mutator transposase [Oryza sativa] 33 1.6
UniRef100_Q7XTP7 OSJNBa0041A02.27 protein [Oryza sativa] 33 1.6
>UniRef100_Q5ZD68 Hypothetical protein P0030H07.11 [Oryza sativa]
Length = 764
Score = 36.6 bits (83), Expect = 0.18
Identities = 17/40 (42%), Positives = 24/40 (59%), Gaps = 1/40 (2%)
Query: 2 RRAKKGRPPITRIRTEMD-DVETERRCGVCRMSDHSRKDC 40
RRAK+GRP TR+++ +D V +R C C + H R C
Sbjct: 692 RRAKRGRPRSTRLKSPVDGGVRKKRICSNCHLKGHYRTGC 731
>UniRef100_Q9LDW9 EST C28952(C62945) corresponds to a region of the predicted gene
[Oryza sativa]
Length = 1591
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q9LDE7 EST C28952(C62945) corresponds to a region of the predicted gene
[Oryza sativa]
Length = 938
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q9FW81 Mutator-like transposase [Oryza sativa]
Length = 1626
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q947Y7 Putative mutator-like transposase [Oryza sativa]
Length = 2421
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 722 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKTC 762
>UniRef100_Q8SB37 Putative transposon protein [Oryza sativa]
Length = 1656
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q8S9Y0 Putative mutator-liketransposase [Oryza sativa]
Length = 929
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q8S5Y6 Putative transposase related protein [Oryza sativa]
Length = 1557
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 789 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 829
>UniRef100_Q8LR53 Putative mutator-like transposase [Oryza sativa]
Length = 1605
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q8LN97 Putative Mu transposable element [Oryza sativa]
Length = 1536
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q8H904 Putative transposase [Oryza sativa]
Length = 1597
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q84SN6 Putative mutator-like transposase [Oryza sativa]
Length = 1153
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q84R42 Putative mutator-like transposase [Oryza sativa]
Length = 844
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 573 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 613
>UniRef100_Q7Y178 Putative mutator-like transposase [Oryza sativa]
Length = 1026
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 3 RAKKGRPPITRIRTEMDDVETER--RCGVCRMSDHSRKDC 40
R K GR RIR +MD++E R RC C H+ K C
Sbjct: 800 RGKAGRRKTRRIRNDMDELEAGRVKRCSKCDERGHTYKHC 839
>UniRef100_Q7XN59 OSJNBa0089N06.23 protein [Oryza sativa]
Length = 1597
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 636 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 676
>UniRef100_Q7XE00 Putative mutator protein [Oryza sativa]
Length = 1656
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q69MM8 Hypothetical protein P0489D11.15 [Oryza sativa]
Length = 480
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 393 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 433
>UniRef100_Q60DM8 MuDR family transposase domain containing protein [Oryza sativa]
Length = 1037
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 3 RAKKGRPPITRIRTEMDDVETER--RCGVCRMSDHSRKDC 40
R K GR RIR +MD++E R RC C H+ K C
Sbjct: 811 RGKAGRRKTRRIRNDMDELEAGRVKRCSKCDERGHTYKHC 850
>UniRef100_Q6L487 Putative mutator transposase [Oryza sativa]
Length = 1385
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 816 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 856
>UniRef100_Q7XTP7 OSJNBa0041A02.27 protein [Oryza sativa]
Length = 1473
Score = 33.5 bits (75), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (50%), Gaps = 3/41 (7%)
Query: 3 RAKKGRPPITRIRTEMDDVET---ERRCGVCRMSDHSRKDC 40
R KKGR RIR +MD+ E RC C + H+ K C
Sbjct: 684 RVKKGRRQTRRIRNDMDESEAGGRTLRCSKCDLRGHTYKKC 724
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.325 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,881,181
Number of Sequences: 2790947
Number of extensions: 1361883
Number of successful extensions: 5473
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 5454
Number of HSP's gapped (non-prelim): 72
length of query: 46
length of database: 848,049,833
effective HSP length: 22
effective length of query: 24
effective length of database: 786,648,999
effective search space: 18879575976
effective search space used: 18879575976
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)
Medicago: description of AC139841.7