BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139841.15 - phase: 0
(147 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O22582 Histone H2B [Gossypium hirsutum] 265 1e-70
UniRef100_Q9LZT0 Histone H2B-like protein [Arabidopsis thaliana] 250 5e-66
UniRef100_P40283 Histone H2B [Arabidopsis thaliana] 250 5e-66
UniRef100_Q8LDE5 Histone H2B-like protein [Arabidopsis thaliana] 248 3e-65
UniRef100_O23629 Histone H2B [Arabidopsis thaliana] 248 3e-65
UniRef100_Q8L950 Histone H2B [Arabidopsis thaliana] 243 8e-64
UniRef100_Q9LQQ4 F24B9.10 protein [Arabidopsis thaliana] 241 2e-63
UniRef100_O65821 Histone H2B [Lycopersicon esculentum] 241 2e-63
UniRef100_Q9SI96 Putative histone H2B [Arabidopsis thaliana] 240 5e-63
UniRef100_O65819 Histone H2B-3 [Lycopersicon esculentum] 239 9e-63
UniRef100_O65818 Histone H2B-2 [Lycopersicon esculentum] 238 2e-62
UniRef100_P93354 Histone H2B [Nicotiana tabacum] 238 2e-62
UniRef100_O49118 Histone H2B [Capsicum annuum] 238 2e-62
UniRef100_Q9FFC0 Histone H2B like protein [Arabidopsis thaliana] 235 1e-61
UniRef100_Q96516 Histone H2B like protein [Arabidopsis thaliana] 234 4e-61
UniRef100_Q9M3H6 Histone H2B [Cicer arietinum] 231 2e-60
UniRef100_Q9LFF6 Histone H2B-like protein [Arabidopsis thaliana] 228 2e-59
UniRef100_P30755 Histone H2B.1 [Zea mays] 227 4e-59
UniRef100_Q9LGH8 Putative histone H2B [Oryza sativa] 226 6e-59
UniRef100_P54348 Histone H2B [Zea mays] 226 6e-59
>UniRef100_O22582 Histone H2B [Gossypium hirsutum]
Length = 147
Score = 265 bits (678), Expect = 1e-70
Identities = 140/148 (94%), Positives = 144/148 (96%), Gaps = 2/148 (1%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVET 59
MAPK EKKPAEKKPAEEKK+ VAEKAPAEKKPKAGKKLPKEGG+AAGDKKK R KK+VET
Sbjct: 1 MAPKAEKKPAEKKPAEEKKA-VAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRVKKSVET 59
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 119
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
>UniRef100_Q9LZT0 Histone H2B-like protein [Arabidopsis thaliana]
Length = 145
Score = 250 bits (638), Expect = 5e-66
Identities = 130/147 (88%), Positives = 133/147 (90%), Gaps = 2/147 (1%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAPK EKKPAEKKP EEK AEKAPAEKKPKAGKKLPKE G+ KKK KK+VETY
Sbjct: 1 MAPKAEKKPAEKKPVEEKSK--AEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETY 58
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTA
Sbjct: 59 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTA 118
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 119 VRLVLPGELAKHAVSEGTKAVTKFTSS 145
>UniRef100_P40283 Histone H2B [Arabidopsis thaliana]
Length = 150
Score = 250 bits (638), Expect = 5e-66
Identities = 130/150 (86%), Positives = 136/150 (90%), Gaps = 3/150 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNV 57
MAPK EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G+ KKK KK+V
Sbjct: 1 MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60
Query: 58 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 117
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREI
Sbjct: 61 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREI 120
Query: 118 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>UniRef100_Q8LDE5 Histone H2B-like protein [Arabidopsis thaliana]
Length = 150
Score = 248 bits (632), Expect = 3e-65
Identities = 129/150 (86%), Positives = 135/150 (90%), Gaps = 3/150 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNV 57
MAPK EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G+ KKK KK+V
Sbjct: 1 MAPKAEKKPAEKKPASEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60
Query: 58 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 117
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNK PTITSREI
Sbjct: 61 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKXPTITSREI 120
Query: 118 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>UniRef100_O23629 Histone H2B [Arabidopsis thaliana]
Length = 150
Score = 248 bits (632), Expect = 3e-65
Identities = 129/150 (86%), Positives = 135/150 (90%), Gaps = 3/150 (2%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNV 57
MAP+ EKKPAEKKPA EK + + AEKAPAEKKPKAGKKLPKE G+ KKK KK+V
Sbjct: 1 MAPRAEKKPAEKKPAAEKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSV 60
Query: 58 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREI 117
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREI
Sbjct: 61 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREI 120
Query: 118 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
QTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 QTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
>UniRef100_Q8L950 Histone H2B [Arabidopsis thaliana]
Length = 148
Score = 243 bits (619), Expect = 8e-64
Identities = 132/151 (87%), Positives = 137/151 (90%), Gaps = 7/151 (4%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKN 56
MAP+ EKKPAEKK A EK ++ AEKAPAEKKPKAGKKLP + AGDKKK RSKKN
Sbjct: 1 MAPRAEKKPAEKKTAAEKPVEENKAAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKKN 57
Query: 57 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 116
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSRE
Sbjct: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 117
Query: 117 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>UniRef100_Q9LQQ4 F24B9.10 protein [Arabidopsis thaliana]
Length = 148
Score = 241 bits (616), Expect = 2e-63
Identities = 131/151 (86%), Positives = 137/151 (89%), Gaps = 7/151 (4%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKN 56
MAP+ EKKPAEKK A E+ ++ AEKAPAEKKPKAGKKLP + AGDKKK RSKKN
Sbjct: 1 MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPK---EAGDKKKKRSKKN 57
Query: 57 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 116
VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSRE
Sbjct: 58 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSRE 117
Query: 117 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 118 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
>UniRef100_O65821 Histone H2B [Lycopersicon esculentum]
Length = 142
Score = 241 bits (615), Expect = 2e-63
Identities = 128/147 (87%), Positives = 134/147 (91%), Gaps = 5/147 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAPK KKPAEKKP EEKK AE+ PAEKKPKAGKKLPK+ G A KKK+SKK+VETY
Sbjct: 1 MAPKAGKKPAEKKPVEEKK---AEEVPAEKKPKAGKKLPKDAG--ADKKKKKSKKSVETY 55
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTA
Sbjct: 56 KIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTA 115
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct: 116 VRLVLPGELAKHAVSEGTKAVTKFTSN 142
>UniRef100_Q9SI96 Putative histone H2B [Arabidopsis thaliana]
Length = 151
Score = 240 bits (612), Expect = 5e-63
Identities = 128/151 (84%), Positives = 136/151 (89%), Gaps = 4/151 (2%)
Query: 1 MAPKGEKKPAEKKPAEE---KKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKN 56
MAPK KKPAEKKPAE+ ++ VAEKAPAEKKPKAGKKLPKE + +KKK R KK+
Sbjct: 1 MAPKAGKKPAEKKPAEKAPAEEEKVAEKAPAEKKPKAGKKLPKEAVTGGVEKKKKRVKKS 60
Query: 57 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSRE 116
ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSRE
Sbjct: 61 TETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSRE 120
Query: 117 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 IQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>UniRef100_O65819 Histone H2B-3 [Lycopersicon esculentum]
Length = 137
Score = 239 bits (610), Expect = 9e-63
Identities = 130/141 (92%), Positives = 134/141 (94%), Gaps = 5/141 (3%)
Query: 8 KPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKK-RSKKNVETYKIYIFK 66
KPAEKKPAE K+ VAEKAPAEKKPKAGKKLPK+ +AAGDKKK RSKK VETYKIYIFK
Sbjct: 1 KPAEKKPAE--KTPVAEKAPAEKKPKAGKKLPKD--AAAGDKKKKRSKKAVETYKIYIFK 56
Query: 67 VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLP 126
VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLP
Sbjct: 57 VLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLP 116
Query: 127 GELAKHAVSEGTKAVTKFTSS 147
GELAKHAVSEGTKAVTKFTSS
Sbjct: 117 GELAKHAVSEGTKAVTKFTSS 137
>UniRef100_O65818 Histone H2B-2 [Lycopersicon esculentum]
Length = 139
Score = 238 bits (608), Expect = 2e-62
Identities = 127/147 (86%), Positives = 132/147 (89%), Gaps = 9/147 (6%)
Query: 2 APKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKR-SKKNVETY 60
APK EKKPAEKKPAEEKK AEK PKAGKKLPKE GS+ DKKK+ SKK++ETY
Sbjct: 1 APKAEKKPAEKKPAEEKK--------AEKTPKAGKKLPKESGSSGADKKKKKSKKSIETY 52
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLAR NKKPTITSREIQTA
Sbjct: 53 KIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARINKKPTITSREIQTA 112
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 113 VRLVLPGELAKHAVSEGTKAVTKFTSS 139
>UniRef100_P93354 Histone H2B [Nicotiana tabacum]
Length = 146
Score = 238 bits (608), Expect = 2e-62
Identities = 122/147 (82%), Positives = 135/147 (90%), Gaps = 1/147 (0%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVETY 60
MAP+ +KKPAEKKP EK + VAEKAPAEKKP+AGKKLP++ G+A KKKR++ +VETY
Sbjct: 1 MAPRADKKPAEKKPGAEK-TPVAEKAPAEKKPRAGKKLPRDAGAAGDKKKKRAEMSVETY 59
Query: 61 KIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTA 120
KIYIF+VLK VHPDIGISSKAMGIMNSFINDIFEKLA+ESSRLA YNKKPTI+SREIQTA
Sbjct: 60 KIYIFRVLKHVHPDIGISSKAMGIMNSFINDIFEKLARESSRLAGYNKKPTISSREIQTA 119
Query: 121 VRLVLPGELAKHAVSEGTKAVTKFTSS 147
VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 VRLVLPGELAKHAVSEGTKAVTKFTSS 146
>UniRef100_O49118 Histone H2B [Capsicum annuum]
Length = 145
Score = 238 bits (608), Expect = 2e-62
Identities = 128/149 (85%), Positives = 134/149 (89%), Gaps = 6/149 (4%)
Query: 1 MAPKGE--KKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVE 58
MAPK KKPAEKKP EEKK AE+ PAEKKPKAGKKLPK+ G KKKR+KK++E
Sbjct: 1 MAPKAAAGKKPAEKKPVEEKK---AEEVPAEKKPKAGKKLPKDAGRP-DKKKKRAKKSIE 56
Query: 59 TYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 118
TYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ
Sbjct: 57 TYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQ 116
Query: 119 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
TAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 117 TAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
>UniRef100_Q9FFC0 Histone H2B like protein [Arabidopsis thaliana]
Length = 145
Score = 235 bits (600), Expect = 1e-61
Identities = 127/145 (87%), Positives = 130/145 (89%), Gaps = 3/145 (2%)
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKI 62
K +KKPAEKKPAE K+ AE A A EKKPKAGKKLPKE A KKKRSKKNVETYKI
Sbjct: 3 KADKKPAEKKPAE--KTPAAEPAAAAEKKPKAGKKLPKEPAGAGDKKKKRSKKNVETYKI 60
Query: 63 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 122
YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVR
Sbjct: 61 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVR 120
Query: 123 LVLPGELAKHAVSEGTKAVTKFTSS 147
LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145
>UniRef100_Q96516 Histone H2B like protein [Arabidopsis thaliana]
Length = 145
Score = 234 bits (596), Expect = 4e-61
Identities = 126/145 (86%), Positives = 130/145 (88%), Gaps = 3/145 (2%)
Query: 4 KGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGDKKKRSKKNVETYKI 62
K +KKPAEKKPAE K+ AE A A EKKPKAGKKLP+E A KKKRSKKNVETYKI
Sbjct: 3 KADKKPAEKKPAE--KTPAAEPAAAAEKKPKAGKKLPEEPAGAGDKKKKRSKKNVETYKI 60
Query: 63 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR 122
YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVR
Sbjct: 61 YIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAGESSKLARYNKKPTITSREIQTAVR 120
Query: 123 LVLPGELAKHAVSEGTKAVTKFTSS 147
LVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 LVLPGELAKHAVSEGTKAVTKFTSS 145
>UniRef100_Q9M3H6 Histone H2B [Cicer arietinum]
Length = 139
Score = 231 bits (589), Expect = 2e-60
Identities = 128/148 (86%), Positives = 131/148 (88%), Gaps = 10/148 (6%)
Query: 1 MAP-KGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVET 59
MAP K EKKPAEKKPA AEKAPAEKKPKA KK+ KEG S KKKR KK+VET
Sbjct: 1 MAPAKAEKKPAEKKPA-------AEKAPAEKKPKAEKKISKEGTS--DKKKKRVKKSVET 51
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQT
Sbjct: 52 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQT 111
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 112 AVRLVLPGELAKHAVSEGTKAVTKFTSS 139
>UniRef100_Q9LFF6 Histone H2B-like protein [Arabidopsis thaliana]
Length = 138
Score = 228 bits (581), Expect = 2e-59
Identities = 125/148 (84%), Positives = 129/148 (86%), Gaps = 11/148 (7%)
Query: 1 MAPKG-EKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGDKKKRSKKNVET 59
MAPK EKKPA KKPAE KAPAEK PKA KK+ KEGGS KKK+SKKN+ET
Sbjct: 1 MAPKAAEKKPAGKKPAE--------KAPAEKLPKAEKKITKEGGSEK--KKKKSKKNIET 50
Query: 60 YKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 119
YKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT
Sbjct: 51 YKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQT 110
Query: 120 AVRLVLPGELAKHAVSEGTKAVTKFTSS 147
AVRLVLPGEL+KHAVSEGTKAVTKFTSS
Sbjct: 111 AVRLVLPGELSKHAVSEGTKAVTKFTSS 138
>UniRef100_P30755 Histone H2B.1 [Zea mays]
Length = 151
Score = 227 bits (579), Expect = 4e-59
Identities = 124/152 (81%), Positives = 132/152 (86%), Gaps = 6/152 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLP----KEGGSAAGDKKKRSKK 55
MAPK EKKPA KKPAEE+ +T EKAPA KKPKA K+LP KEGG KKK +KK
Sbjct: 1 MAPKAEKKPAAKKPAEEEPATEKVEKAPAGKKPKAEKRLPAGKSKEGGEGKKGKKK-AKK 59
Query: 56 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSR 115
+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITSR
Sbjct: 60 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAESAKLARYNKKPTITSR 119
Query: 116 EIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
EIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 120 EIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 151
>UniRef100_Q9LGH8 Putative histone H2B [Oryza sativa]
Length = 153
Score = 226 bits (577), Expect = 6e-59
Identities = 124/153 (81%), Positives = 133/153 (86%), Gaps = 6/153 (3%)
Query: 1 MAPKGEKKPAEKKPAEEKKSTV-AEKAPAEKKPKAGKKLPK---EGGSAAGDK--KKRSK 54
MAPK EKKPA KKPAEE+ + AEKAPA KKPKA K+LP E GS G K +K++K
Sbjct: 1 MAPKAEKKPAAKKPAEEEPAAEKAEKAPAGKKPKAEKRLPAGKGEKGSGEGKKAGRKKAK 60
Query: 55 KNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITS 114
K+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA ES++LARYNKKPTITS
Sbjct: 61 KSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITS 120
Query: 115 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 REIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 153
>UniRef100_P54348 Histone H2B [Zea mays]
Length = 154
Score = 226 bits (577), Expect = 6e-59
Identities = 123/154 (79%), Positives = 133/154 (85%), Gaps = 7/154 (4%)
Query: 1 MAPKGEKKPAEKKPAEEK---KSTVAEKAPAEKKPKAGKKLP--KEGGSAAGDKK--KRS 53
MAPK EKKPA KK AEE+ K+ AEKAPA KKPKA K+LP K G GDKK K++
Sbjct: 1 MAPKAEKKPAAKKVAEEEPSEKAAPAEKAPAGKKPKAEKRLPAGKSAGKEGGDKKGRKKA 60
Query: 54 KKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTIT 113
KK+VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTIT
Sbjct: 61 KKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAAEAAKLARYNKKPTIT 120
Query: 114 SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
SREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct: 121 SREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 154
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.306 0.125 0.328
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,349,892
Number of Sequences: 2790947
Number of extensions: 9206579
Number of successful extensions: 80399
Number of sequences better than 10.0: 2140
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 1144
Number of HSP's that attempted gapping in prelim test: 62408
Number of HSP's gapped (non-prelim): 12580
length of query: 147
length of database: 848,049,833
effective HSP length: 123
effective length of query: 24
effective length of database: 504,763,352
effective search space: 12114320448
effective search space used: 12114320448
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 67 (30.4 bits)
Medicago: description of AC139841.15