Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139841.14 + phase: 0 /pseudo
         (99 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9XII4 Hypothetical protein At2g16030 [Arabidopsis tha...   100  6e-21
UniRef100_Q9SZ14 Hypothetical protein F10M23.70 [Arabidopsis tha...    45  5e-04
UniRef100_Q6ZJ43 Hypothetical protein OJ1005_B05.24 [Oryza sativa]     40  0.018
UniRef100_Q9FYL5 F21J9.14 [Arabidopsis thaliana]                       36  0.19
UniRef100_Q9SZX0 Hypothetical protein F6I7.10 [Arabidopsis thali...    35  0.57
UniRef100_Q94C79 Hypothetical protein At4g24805 [Arabidopsis tha...    33  1.7
UniRef100_UPI0000452A11 UPI0000452A11 UniRef100 entry                  31  8.2
UniRef100_UPI000042EA51 UPI000042EA51 UniRef100 entry                  31  8.2
UniRef100_UPI0000335CDB UPI0000335CDB UniRef100 entry                  31  8.2
UniRef100_Q5XVJ9 Hypothetical protein [Arabidopsis thaliana]           31  8.2

>UniRef100_Q9XII4 Hypothetical protein At2g16030 [Arabidopsis thaliana]
          Length = 231

 Score =  100 bits (250), Expect = 6e-21
 Identities = 46/97 (47%), Positives = 68/97 (69%), Gaps = 1/97 (1%)

Query: 1  MEKEIETFLRKLSLVAIAIASLTLLILFLQIPNTRVPSEAPSKPHLRFPKSTCDFTSTHL 60
          ME+ +E  L+++S+V ++I ++ ++I+ LQ P T +  EAPSKPH  FP+STCD +S   
Sbjct: 1  MERNVEKMLKRVSIVFLSIGTVLMVIMILQTPKTCISPEAPSKPHTHFPRSTCD-SSPRQ 59

Query: 61 HLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRNLGLL 97
          HLP  KKN R+WSS  W ++L+SFS  FL  R+LG +
Sbjct: 60 HLPLPKKNARIWSSGAWKSRLYSFSTYFLRFRDLGFI 96


>UniRef100_Q9SZ14 Hypothetical protein F10M23.70 [Arabidopsis thaliana]
          Length = 208

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 19/38 (50%), Positives = 25/38 (65%)

Query: 60 LHLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRNLGLL 97
          +HLP  KKN R+W S  W ++L SFS  FL  R+LG +
Sbjct: 24 MHLPLPKKNARIWFSGAWKSRLSSFSTYFLRFRDLGFI 61


>UniRef100_Q6ZJ43 Hypothetical protein OJ1005_B05.24 [Oryza sativa]
          Length = 260

 Score = 39.7 bits (91), Expect = 0.018
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)

Query: 13  SLVAIAIASLTLLILFLQIPNTRVP--------SEAPSKPHLRFPK----STCDFTSTHL 60
           SL+ + I  L+LL+L+    +   P        S  P  PH+R  +    S  D+    L
Sbjct: 17  SLLLLLIPFLSLLLLYSYSSSPPPPPVAFAVPLSPTPPSPHIRMRRAGFRSYEDYLRHQL 76

Query: 61  HLPSHKKNNRLWSSRDWNNKLHSFSRLF 88
           +     +  R+W++RDW+ K+ +F+R F
Sbjct: 77  NKTLDPRLRRVWATRDWHRKVDAFARAF 104


>UniRef100_Q9FYL5 F21J9.14 [Arabidopsis thaliana]
          Length = 239

 Score = 36.2 bits (82), Expect = 0.19
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 19 IASLTLLILFLQIPNTRVPSEAPSKPHLRFPKSTCDFTS------THLHLPSHKKNNRLW 72
          I    L+ +FL +P     S    KP     +    +TS        L+   + +   +W
Sbjct: 7  ILKYVLVSIFLTLPLILFFSIQLRKPEKELIRIRPGYTSYDYYIQRQLNKTLNPRLRTIW 66

Query: 73 SSRDWNNKLHSFSRLFLHIRNLGLLPK 99
           +RDW+ K+  FSR F  ++  GLL K
Sbjct: 67 MTRDWDRKIKVFSRFFQDLKRQGLLSK 93


>UniRef100_Q9SZX0 Hypothetical protein F6I7.10 [Arabidopsis thaliana]
          Length = 942

 Score = 34.7 bits (78), Expect = 0.57
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 13/110 (11%)

Query: 1   MEKEIETFLRKLSLVAIAIASLTLLILFL-QIPNT----------RVPSEAPSKPHLRFP 49
           +E  ++  + KL        SL+ LI+FL   P T           V S A     +R  
Sbjct: 692 LEANMKFVIPKLPFTLSLFLSLSFLIIFLFAFPTTFLRRPLSSSSSVTSVADEGIRIRHH 751

Query: 50  --KSTCDFTSTHLHLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRNLGLL 97
              S   +    L+   + K  ++W++RDW+ K+  FS  F  + + GLL
Sbjct: 752 GYSSYEAYIKHQLNKTQNPKLRKVWTTRDWDRKVRVFSTFFRRLSDRGLL 801


>UniRef100_Q94C79 Hypothetical protein At4g24805 [Arabidopsis thaliana]
          Length = 247

 Score = 33.1 bits (74), Expect = 1.7
 Identities = 13/38 (34%), Positives = 23/38 (60%)

Query: 60  LHLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRNLGLL 97
           L+   + K  ++W++RDW+ K+  FS  F  + + GLL
Sbjct: 69  LNKTQNPKLRKVWTTRDWDRKVRVFSTFFRRLSDRGLL 106


>UniRef100_UPI0000452A11 UPI0000452A11 UniRef100 entry
          Length = 981

 Score = 30.8 bits (68), Expect = 8.2
 Identities = 20/67 (29%), Positives = 33/67 (48%), Gaps = 3/67 (4%)

Query: 12  LSLVAIAIASLTLLILFLQIPNTRVPSEAPSKPHLR--FPKSTCDFTSTHLHLPSHKKNN 69
           +S   I  ++L  ++   +I     P E P KP     F  +T +F+ST +H PS + +N
Sbjct: 770 MSFSGIPFSTLQAILFIDEIKERNKPIEPPKKPESAPFFLPNTSEFSST-IHKPSKESDN 828

Query: 70  RLWSSRD 76
               S+D
Sbjct: 829 EEVISKD 835


>UniRef100_UPI000042EA51 UPI000042EA51 UniRef100 entry
          Length = 981

 Score = 30.8 bits (68), Expect = 8.2
 Identities = 20/67 (29%), Positives = 33/67 (48%), Gaps = 3/67 (4%)

Query: 12  LSLVAIAIASLTLLILFLQIPNTRVPSEAPSKPHLR--FPKSTCDFTSTHLHLPSHKKNN 69
           +S   I  ++L  ++   +I     P E P KP     F  +T +F+ST +H PS + +N
Sbjct: 770 MSFSGIPFSTLQAILFIDEIKERNKPIEPPKKPESAPFFLPNTTEFSST-IHKPSKESDN 828

Query: 70  RLWSSRD 76
               S+D
Sbjct: 829 EEIISKD 835


>UniRef100_UPI0000335CDB UPI0000335CDB UniRef100 entry
          Length = 243

 Score = 30.8 bits (68), Expect = 8.2
 Identities = 19/64 (29%), Positives = 26/64 (39%), Gaps = 3/64 (4%)

Query: 35 RVPSEAPSKPHLRFPKSTCDFTSTHLHLPSHKKNNRLWSSRDWNNKLHSFSRLFLHIRNL 94
          R  +   +  H R  K TC  T THL   +HK  N   +    +   HS ++   H   L
Sbjct: 12 RTHTHTHTHTHARTTKHTCTETQTHLRRHTHKHTN---THTHTHTHTHSHTQTHTHTHTL 68

Query: 95 GLLP 98
            LP
Sbjct: 69 FNLP 72


>UniRef100_Q5XVJ9 Hypothetical protein [Arabidopsis thaliana]
          Length = 173

 Score = 30.8 bits (68), Expect = 8.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)

Query: 74 SRDWNNKLHSFSRLFLHIRNLGLLPK 99
          +RDW+ K+  FSR F  ++  GLL K
Sbjct: 2  TRDWDRKIKXFSRFFQDLKRQGLLSK 27


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.323    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,550,932
Number of Sequences: 2790947
Number of extensions: 6617514
Number of successful extensions: 14149
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 14142
Number of HSP's gapped (non-prelim): 10
length of query: 99
length of database: 848,049,833
effective HSP length: 75
effective length of query: 24
effective length of database: 638,728,808
effective search space: 15329491392
effective search space used: 15329491392
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 68 (30.8 bits)


Medicago: description of AC139841.14