BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139748.4 + phase: 0 /pseudo
(36 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9LS62 Similarity to a DNAJ-like domain [Arabidopsis t... 42 0.006
UniRef100_Q6I5V9 Hypothetical protein OJ1076_H08.16 [Oryza sativa] 41 0.010
UniRef100_Q5W6P9 Putative polyprotein [Oryza sativa] 40 0.017
UniRef100_Q5W652 Hypothetical protein OSJNBb0052F16.10 [Oryza sa... 40 0.017
UniRef100_Q7XUR9 OSJNBa0084K11.21 protein [Oryza sativa] 40 0.017
UniRef100_Q5W6B8 Putative polyprotein [Oryza sativa] 40 0.017
UniRef100_Q7XV92 OSJNBb0012E08.4 protein [Oryza sativa] 40 0.017
UniRef100_Q6L4U5 Hypothetical protein P0010D04.14 [Oryza sativa] 39 0.029
UniRef100_Q948B6 Putative transposase [Oryza sativa] 39 0.029
UniRef100_O04648 A_TM021B04.9 protein [Arabidopsis thaliana] 37 0.11
UniRef100_Q9M1P0 Hypothetical protein T18B22.40 [Arabidopsis tha... 37 0.11
UniRef100_Q7XPC6 OSJNBa0042N22.14 protein [Oryza sativa] 37 0.11
UniRef100_Q7XVX0 OSJNBa0004L19.15 protein [Oryza sativa] 37 0.15
UniRef100_Q8LMQ4 Hypothetical protein OSJNBa0011L14.7 [Oryza sat... 34 1.2
UniRef100_Q851D2 Hypothetical protein OSJNBb0021P10.10 [Oryza sa... 33 2.1
UniRef100_UPI000042F3D4 UPI000042F3D4 UniRef100 entry 32 3.6
UniRef100_Q8LNR6 Hypothetical protein OSJNBa0042E19.20 [Oryza sa... 32 3.6
UniRef100_Q8RZX5 En/Spm-like transposon-like protein [Oryza sativa] 32 3.6
UniRef100_Q8H7L8 Hypothetical protein OSJNBb0014I10.8 [Oryza sat... 32 3.6
UniRef100_Q75K46 Hypothetical protein OSJNBb0108E08.7 [Oryza sat... 32 3.6
>UniRef100_Q9LS62 Similarity to a DNAJ-like domain [Arabidopsis thaliana]
Length = 194
Score = 41.6 bits (96), Expect = 0.006
Identities = 14/24 (58%), Positives = 22/24 (91%)
Query: 3 LPNRIKNNPKYYPWFKNCIGAIDG 26
+P +IK+N ++YP+FK+C+GAIDG
Sbjct: 68 VPTKIKDNTRFYPYFKDCVGAIDG 91
>UniRef100_Q6I5V9 Hypothetical protein OJ1076_H08.16 [Oryza sativa]
Length = 251
Score = 40.8 bits (94), Expect = 0.010
Identities = 14/21 (66%), Positives = 20/21 (94%)
Query: 6 RIKNNPKYYPWFKNCIGAIDG 26
+I+ NP+++P+FKNCIGAIDG
Sbjct: 152 KIRTNPRFFPYFKNCIGAIDG 172
>UniRef100_Q5W6P9 Putative polyprotein [Oryza sativa]
Length = 1067
Score = 40.0 bits (92), Expect = 0.017
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MELPNRIKNNPKYYPWFKNCIGAIDGLLLR 30
++ P +I NP++ P+FK+CIGAIDG +R
Sbjct: 62 LDTPTKIAGNPRWDPYFKDCIGAIDGTHIR 91
>UniRef100_Q5W652 Hypothetical protein OSJNBb0052F16.10 [Oryza sativa]
Length = 1220
Score = 40.0 bits (92), Expect = 0.017
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MELPNRIKNNPKYYPWFKNCIGAIDGLLLR 30
++ P +I NP++ P+FK+CIGAIDG +R
Sbjct: 215 LDTPTKIAGNPRWDPYFKDCIGAIDGTHIR 244
>UniRef100_Q7XUR9 OSJNBa0084K11.21 protein [Oryza sativa]
Length = 377
Score = 40.0 bits (92), Expect = 0.017
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MELPNRIKNNPKYYPWFKNCIGAIDGLLLR 30
++ P +I NP++ P+FK+CIGAIDG +R
Sbjct: 133 LDTPTKIAGNPRWDPYFKDCIGAIDGTHIR 162
>UniRef100_Q5W6B8 Putative polyprotein [Oryza sativa]
Length = 561
Score = 40.0 bits (92), Expect = 0.017
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MELPNRIKNNPKYYPWFKNCIGAIDGLLLR 30
++ P +I NP++ P+FK+CIGAIDG +R
Sbjct: 110 LDTPTKIAGNPRWDPYFKDCIGAIDGTHIR 139
>UniRef100_Q7XV92 OSJNBb0012E08.4 protein [Oryza sativa]
Length = 261
Score = 40.0 bits (92), Expect = 0.017
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 1 MELPNRIKNNPKYYPWFKNCIGAIDGLLLR 30
++ P +I NP++ P+FK+CIGAIDG +R
Sbjct: 110 LDTPTKIAGNPRWDPYFKDCIGAIDGTHIR 139
>UniRef100_Q6L4U5 Hypothetical protein P0010D04.14 [Oryza sativa]
Length = 200
Score = 39.3 bits (90), Expect = 0.029
Identities = 13/21 (61%), Positives = 20/21 (94%)
Query: 6 RIKNNPKYYPWFKNCIGAIDG 26
+I+ +P++YP+FKNC+GAIDG
Sbjct: 157 KIEKDPRFYPYFKNCLGAIDG 177
>UniRef100_Q948B6 Putative transposase [Oryza sativa]
Length = 435
Score = 39.3 bits (90), Expect = 0.029
Identities = 13/21 (61%), Positives = 20/21 (94%)
Query: 6 RIKNNPKYYPWFKNCIGAIDG 26
+I+ +P++YP+FKNC+GAIDG
Sbjct: 157 KIEKDPRFYPYFKNCLGAIDG 177
>UniRef100_O04648 A_TM021B04.9 protein [Arabidopsis thaliana]
Length = 1609
Score = 37.4 bits (85), Expect = 0.11
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 3 LPNRIKNNPKYYPWFKNCIGAIDG 26
+P++I ++YP+FK+C+GAIDG
Sbjct: 1204 VPSKISKTTRFYPYFKDCVGAIDG 1227
>UniRef100_Q9M1P0 Hypothetical protein T18B22.40 [Arabidopsis thaliana]
Length = 377
Score = 37.4 bits (85), Expect = 0.11
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 1 MELPNRIKNNPKYYPWFKNCIGAIDG 26
+ +P +I+ + +YP+FK+CIGAIDG
Sbjct: 127 VRVPAKIRESTSFYPYFKDCIGAIDG 152
>UniRef100_Q7XPC6 OSJNBa0042N22.14 protein [Oryza sativa]
Length = 401
Score = 37.4 bits (85), Expect = 0.11
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 4 PNRIKNNPKYYPWFKNCIGAIDGLLLR 30
P++I NP + P+FK+CIGAIDG +R
Sbjct: 101 PSKILGNPMWDPYFKDCIGAIDGTHVR 127
>UniRef100_Q7XVX0 OSJNBa0004L19.15 protein [Oryza sativa]
Length = 639
Score = 37.0 bits (84), Expect = 0.15
Identities = 13/17 (76%), Positives = 16/17 (93%)
Query: 10 NPKYYPWFKNCIGAIDG 26
NP+YYP+F +CIGAIDG
Sbjct: 500 NPRYYPYFNDCIGAIDG 516
>UniRef100_Q8LMQ4 Hypothetical protein OSJNBa0011L14.7 [Oryza sativa]
Length = 1202
Score = 33.9 bits (76), Expect = 1.2
Identities = 12/19 (63%), Positives = 17/19 (89%)
Query: 12 KYYPWFKNCIGAIDGLLLR 30
K+YP+FK+CIGA+DG +R
Sbjct: 691 KFYPYFKDCIGALDGTHIR 709
>UniRef100_Q851D2 Hypothetical protein OSJNBb0021P10.10 [Oryza sativa]
Length = 515
Score = 33.1 bits (74), Expect = 2.1
Identities = 11/17 (64%), Positives = 15/17 (87%)
Query: 10 NPKYYPWFKNCIGAIDG 26
NP++YP+F +CI AIDG
Sbjct: 267 NPRFYPYFNDCIAAIDG 283
>UniRef100_UPI000042F3D4 UPI000042F3D4 UniRef100 entry
Length = 256
Score = 32.3 bits (72), Expect = 3.6
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 6 RIKNNPKYYPWFKNCIGAIDGLLLR 30
RI + K+ P+F NC+GA+DG +R
Sbjct: 121 RILRSTKFSPYFDNCVGALDGTHIR 145
>UniRef100_Q8LNR6 Hypothetical protein OSJNBa0042E19.20 [Oryza sativa]
Length = 481
Score = 32.3 bits (72), Expect = 3.6
Identities = 10/21 (47%), Positives = 18/21 (85%)
Query: 6 RIKNNPKYYPWFKNCIGAIDG 26
+I + +++P+F+NC+GAIDG
Sbjct: 26 KISTDQQFFPYFQNCLGAIDG 46
>UniRef100_Q8RZX5 En/Spm-like transposon-like protein [Oryza sativa]
Length = 844
Score = 32.3 bits (72), Expect = 3.6
Identities = 11/17 (64%), Positives = 15/17 (87%)
Query: 10 NPKYYPWFKNCIGAIDG 26
NP ++P+F +CIGAIDG
Sbjct: 680 NPDFWPYFNDCIGAIDG 696
>UniRef100_Q8H7L8 Hypothetical protein OSJNBb0014I10.8 [Oryza sativa]
Length = 807
Score = 32.3 bits (72), Expect = 3.6
Identities = 11/17 (64%), Positives = 16/17 (93%)
Query: 10 NPKYYPWFKNCIGAIDG 26
N +++P+FK+CIGAIDG
Sbjct: 615 NRRFFPYFKDCIGAIDG 631
>UniRef100_Q75K46 Hypothetical protein OSJNBb0108E08.7 [Oryza sativa]
Length = 767
Score = 32.3 bits (72), Expect = 3.6
Identities = 11/17 (64%), Positives = 16/17 (93%)
Query: 10 NPKYYPWFKNCIGAIDG 26
N +++P+FK+CIGAIDG
Sbjct: 533 NRRFFPYFKDCIGAIDG 549
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.324 0.146 0.491
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,441,602
Number of Sequences: 2790947
Number of extensions: 1514922
Number of successful extensions: 3328
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3305
Number of HSP's gapped (non-prelim): 23
length of query: 36
length of database: 848,049,833
effective HSP length: 12
effective length of query: 24
effective length of database: 814,558,469
effective search space: 19549403256
effective search space used: 19549403256
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)
Medicago: description of AC139748.4