BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139708.7 + phase: 0 
         (159 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9FI47 Arabidopsis thaliana genomic DNA, chromosome 5,...   182  3e-45
UniRef100_Q9FFJ2 Arabidopsis thaliana genomic DNA, chromosome 5,...    61  1e-08
UniRef100_Q84SC5 Hypothetical protein P0577B11.138 [Oryza sativa]      60  2e-08
UniRef100_UPI0000276362 UPI0000276362 UniRef100 entry                  54  2e-06
UniRef100_P24297 Rubredoxin [Pyrococcus furiosus]                      49  5e-05
UniRef100_P04170 Rubredoxin 1 [Desulfovibrio desulfuricans]            48  7e-05
UniRef100_O26258 Probable rubredoxin [Methanobacterium thermoaut...    47  2e-04
UniRef100_P96745 Rubredoxin [Clostridium butyricum]                    46  4e-04
UniRef100_UPI0000346478 UPI0000346478 UniRef100 entry                  45  5e-04
UniRef100_Q6H060 Putative rubrerythrin [Fremyella diplosiphon]         45  6e-04
UniRef100_Q9V099 Rubredoxin [Pyrococcus abyssi]                        45  6e-04
UniRef100_O26259 Rubredoxin [Methanobacterium thermoautotrophicum]     45  8e-04
UniRef100_P58992 Rubredoxin 1 [Chlorobium tepidum]                     45  8e-04
UniRef100_P15412 Rubredoxin [Desulfovibrio vulgaris]                   44  0.001
UniRef100_Q9AL94 Rubredoxin [Clostridium acetobutylicum]               44  0.001
UniRef100_P58993 Rubredoxin 2 [Chlorobium tepidum]                     44  0.001
UniRef100_Q9WZC7 Rubredoxin [Thermotoga maritima]                      44  0.001
UniRef100_Q8A4Q8 Rubredoxin [Bacteroides thetaiotaomicron]             44  0.001
UniRef100_P09947 Rubredoxin [Chlorobium limicola f.sp. thiosulfa...    44  0.001
UniRef100_P00269 Rubredoxin [Desulfovibrio vulgaris]                   44  0.002

>UniRef100_Q9FI47 Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7
           [Arabidopsis thaliana]
          Length = 154

 Score =  182 bits (461), Expect = 3e-45
 Identities = 97/160 (60%), Positives = 115/160 (71%), Gaps = 9/160 (5%)

Query: 1   MALQVQ-ASLYTTRLSPTATPTLLRPLSNPSTLKTSFFSR-SLNLLLHPNQLQLAYGPPR 58
           MA+Q+   +LY  R S    PT       P+  ++SF    S+ LL +   L  +   PR
Sbjct: 1   MAMQLPPTTLYAGRSSVVLPPT------TPTLQRSSFLPYYSMRLLGNKKSLSKS-SAPR 53

Query: 59  FTMRVASKQAYICRDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATDVNKKANETD 118
           F+MRV+SKQAYICRDCGYIYN+RT FDKLPD YFCPVC APKRRF+ Y  DV+K  N+ D
Sbjct: 54  FSMRVSSKQAYICRDCGYIYNDRTPFDKLPDNYFCPVCAAPKRRFRAYMPDVSKNVNDKD 113

Query: 119 VRKARKAELQRDEAVGKALPIAVAVGVVVLAGLYFYLNST 158
           VRKARKAELQRDEAVGKALPI +AVGV+ LA LYFY+NST
Sbjct: 114 VRKARKAELQRDEAVGKALPIGIAVGVLALAALYFYVNST 153


>UniRef100_Q9FFJ2 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKP11
           [Arabidopsis thaliana]
          Length = 271

 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 41/101 (40%), Positives = 51/101 (49%), Gaps = 26/101 (25%)

Query: 56  PPRFTMRVASKQ----AYICRDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATDVN 111
           PPRF  ++   Q     +IC DCG+IY    +FD+ PD Y CP C APK+RF  Y  DVN
Sbjct: 180 PPRFGRKLTETQKARATHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKY--DVN 237

Query: 112 KKANETDVRKARKAELQRDEAVGKAL-PIAVAVGVVVLAGL 151
                              +A+G  L PI V VG  +LAGL
Sbjct: 238 -----------------TGKAIGGGLPPIGVIVG--LLAGL 259


>UniRef100_Q84SC5 Hypothetical protein P0577B11.138 [Oryza sativa]
          Length = 260

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 36/102 (35%), Positives = 51/102 (49%), Gaps = 25/102 (24%)

Query: 56  PPRFTMRVASKQ----AYICRDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATDVN 111
           PPRF  ++   Q     +IC DCGYIY     F++ PD+Y CP C APK+RF  Y  +  
Sbjct: 169 PPRFGRKLTESQKARATHICLDCGYIYFLPKPFEEQPDEYGCPQCNAPKKRFAKYDAETG 228

Query: 112 KKANETDVRKARKAELQRDEAVGKAL-PIAVAVGVVV-LAGL 151
           +                   A+G AL PI V V +++ +AG+
Sbjct: 229 R-------------------AIGGALPPITVIVSLIIGIAGV 251


>UniRef100_UPI0000276362 UPI0000276362 UniRef100 entry
          Length = 369

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 21/53 (39%), Positives = 31/53 (57%)

Query: 62  RVASKQAYICRDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATDVNKKA 114
           +   +  +IC  CGYIY E   F++LP+ Y CP C APK +F+   T+   K+
Sbjct: 37  KAMGQATHICTACGYIYQETKPFEELPEDYVCPSCSAPKSKFEAMKTEEAPKS 89


>UniRef100_P24297 Rubredoxin [Pyrococcus furiosus]
          Length = 53

 Score = 48.5 bits (114), Expect = 5e-05
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 11/47 (23%)

Query: 69  YICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFK 104
           ++C+ CGYIY+E            T F++LPD + CP+CGAPK  F+
Sbjct: 3   WVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFE 49


>UniRef100_P04170 Rubredoxin 1 [Desulfovibrio desulfuricans]
          Length = 45

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 20/43 (46%), Positives = 26/43 (59%), Gaps = 4/43 (9%)

Query: 67  QAYICRDCGYIYN----ERTAFDKLPDKYFCPVCGAPKRRFKP 105
           Q Y+C  CGY Y+    +   FD+LPD + CPVCG  K +F P
Sbjct: 2   QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQFSP 44


>UniRef100_O26258 Probable rubredoxin [Methanobacterium thermoautotrophicum]
          Length = 63

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 22/54 (40%), Positives = 30/54 (54%), Gaps = 11/54 (20%)

Query: 63  VASKQAYICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFKP 105
           V++ + Y CR CGYIY+             T F+ LP+ + CP CGA K+ FKP
Sbjct: 8   VSAMKRYKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMFKP 61


>UniRef100_P96745 Rubredoxin [Clostridium butyricum]
          Length = 53

 Score = 45.8 bits (107), Expect = 4e-04
 Identities = 20/49 (40%), Positives = 27/49 (54%), Gaps = 11/49 (22%)

Query: 67  QAYICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFK 104
           + YIC  CGYIY+E            T F+ +PD + CP+CG PK  F+
Sbjct: 2   EKYICTVCGYIYDEAAGDPDNGVAPGTKFEDIPDDWVCPLCGVPKSDFE 50


>UniRef100_UPI0000346478 UPI0000346478 UniRef100 entry
          Length = 53

 Score = 45.4 bits (106), Expect = 5e-04
 Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 11/50 (22%)

Query: 67  QAYICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFKP 105
           Q Y C+ CGYIY+             TAF+ LP+ + CP+CGA K  F+P
Sbjct: 2   QKYECQLCGYIYDPELGDEDSGIEPGTAFENLPEDWVCPLCGAEKSDFEP 51


>UniRef100_Q6H060 Putative rubrerythrin [Fremyella diplosiphon]
          Length = 251

 Score = 45.1 bits (105), Expect = 6e-04
 Identities = 20/48 (41%), Positives = 27/48 (55%), Gaps = 11/48 (22%)

Query: 69  YICRDCGYIYNE-----------RTAFDKLPDKYFCPVCGAPKRRFKP 105
           +ICR C  IY+             TAF+ +PD + CP+CGA K+ FKP
Sbjct: 197 WICRQCSMIYDPVAGDPDSGIAPGTAFEDIPDDWRCPICGATKKTFKP 244


>UniRef100_Q9V099 Rubredoxin [Pyrococcus abyssi]
          Length = 53

 Score = 45.1 bits (105), Expect = 6e-04
 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 11/45 (24%)

Query: 71  CRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFK 104
           C+ CGYIY+E            T F+ LPD + CP+CGAPK  F+
Sbjct: 6   CKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEFE 50


>UniRef100_O26259 Rubredoxin [Methanobacterium thermoautotrophicum]
          Length = 53

 Score = 44.7 bits (104), Expect = 8e-04
 Identities = 20/47 (42%), Positives = 26/47 (54%), Gaps = 11/47 (23%)

Query: 69  YICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFK 104
           Y+C+ CGYIY+             T F+ LPD + CPVCG  K +FK
Sbjct: 4   YVCQMCGYIYDPEEGDPVSGIEAGTPFEDLPDDWVCPVCGVGKDQFK 50


>UniRef100_P58992 Rubredoxin 1 [Chlorobium tepidum]
          Length = 69

 Score = 44.7 bits (104), Expect = 8e-04
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 11/54 (20%)

Query: 68  AYICRDCGYIYNERTA-----------FDKLPDKYFCPVCGAPKRRFKPYATDV 110
           +++C +CGYIY+               FDKLPD + CPVC  PK +F  + + +
Sbjct: 16  SWMCAECGYIYDPAEGNLETNIRPGMPFDKLPDDWSCPVCNHPKNQFTKFISQL 69


>UniRef100_P15412 Rubredoxin [Desulfovibrio vulgaris]
          Length = 52

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 19/48 (39%), Positives = 26/48 (53%), Gaps = 11/48 (22%)

Query: 69  YICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFKP 105
           Y+C  CGY Y+             TAF+ +P  + CP+CGAPK  F+P
Sbjct: 4   YVCTVCGYEYDPAEGDPDNGVKPGTAFEDVPADWVCPICGAPKSEFEP 51


>UniRef100_Q9AL94 Rubredoxin [Clostridium acetobutylicum]
          Length = 54

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 19/48 (39%), Positives = 27/48 (55%), Gaps = 11/48 (22%)

Query: 69  YICRDCGYIY-----------NERTAFDKLPDKYFCPVCGAPKRRFKP 105
           Y+C  CGYIY           N  T+F+ +PD + CP+CG  K +F+P
Sbjct: 4   YVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEP 51


>UniRef100_P58993 Rubredoxin 2 [Chlorobium tepidum]
          Length = 52

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 20/44 (45%), Positives = 23/44 (51%), Gaps = 11/44 (25%)

Query: 71  CRDCGYIYNERT-----------AFDKLPDKYFCPVCGAPKRRF 103
           C  CGYIYN  T           +F+ LPD + CPVCGA K  F
Sbjct: 6   CNICGYIYNPETGDPEGDIPAGTSFESLPDSWMCPVCGAGKEEF 49


>UniRef100_Q9WZC7 Rubredoxin [Thermotoga maritima]
          Length = 53

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 20/48 (41%), Positives = 26/48 (53%), Gaps = 11/48 (22%)

Query: 69  YICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFKP 105
           Y C+ CGYIY+             T F+ LPD + CP+CGA K  F+P
Sbjct: 4   YRCKLCGYIYDPEQGDPDSGIEPGTPFEDLPDDWVCPLCGASKEDFEP 51


>UniRef100_Q8A4Q8 Rubredoxin [Bacteroides thetaiotaomicron]
          Length = 54

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 20/49 (40%), Positives = 26/49 (52%), Gaps = 11/49 (22%)

Query: 69  YICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFKPY 106
           YIC  C YIY+             TAF+ +PD + CP+CG  K  F+PY
Sbjct: 4   YICTVCEYIYDPAQGDPESGIEPGTAFEDIPDDWTCPLCGVGKEDFEPY 52


>UniRef100_P09947 Rubredoxin [Chlorobium limicola f.sp. thiosulfatophilum]
          Length = 53

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)

Query: 67  QAYICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFKP 105
           Q Y+C  CGY+Y+             T F+ LP+ + CPVCG  K  F+P
Sbjct: 2   QKYVCSVCGYVYDPADGEPDDPIDPGTGFEDLPEDWVCPVCGVDKDLFEP 51


>UniRef100_P00269 Rubredoxin [Desulfovibrio vulgaris]
          Length = 52

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 20/47 (42%), Positives = 25/47 (52%), Gaps = 11/47 (23%)

Query: 69  YICRDCGYIYNER-----------TAFDKLPDKYFCPVCGAPKRRFK 104
           Y+C  CGY Y+             T+FD LP  + CPVCGAPK  F+
Sbjct: 4   YVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEFE 50


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.322    0.136    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,662,244
Number of Sequences: 2790947
Number of extensions: 9399114
Number of successful extensions: 32597
Number of sequences better than 10.0: 207
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 32435
Number of HSP's gapped (non-prelim): 215
length of query: 159
length of database: 848,049,833
effective HSP length: 117
effective length of query: 42
effective length of database: 521,509,034
effective search space: 21903379428
effective search space used: 21903379428
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)