BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139600.2 + phase: 0
(98 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6T705 Chlorophyll a/b binding protein [Trifolium prat... 195 2e-49
UniRef100_Q41447 Chlorophyll a/b-binding protein PS II-Type I pr... 194 3e-49
UniRef100_Q41421 Chlorophyll a/b binding protein [Solanum tubero... 194 3e-49
UniRef100_P07369 Chlorophyll a-b binding protein 3C, chloroplast... 194 3e-49
UniRef100_Q40185 L.gibba light-harvesting chlorophyll a/b protei... 194 4e-49
UniRef100_O81391 Chlorophyll a/b binding protein [Medicago sativa] 194 4e-49
UniRef100_P14277 Chlorophyll a-b binding protein 3B, chloroplast... 194 6e-49
UniRef100_P14276 Chlorophyll a-b binding protein 3A, chloroplast... 194 6e-49
UniRef100_P04782 Chlorophyll a-b binding protein 25, chloroplast... 194 6e-49
UniRef100_Q5ZBV8 Putative a/b-binding protein [Oryza sativa] 193 7e-49
UniRef100_Q5ZBV7 A/b-binding protein-like [Oryza sativa] 193 7e-49
UniRef100_Q8W0E6 Chlorophyll a/b binding protein [Oryza sativa] 193 1e-48
UniRef100_Q41424 Chlorophyll a/b binding protein [Solanum tubero... 193 1e-48
UniRef100_Q41422 Chlorophyll a/b binding protein [Solanum tubero... 193 1e-48
UniRef100_O64448 Light harvesting chlorophyll a/b-binding protei... 193 1e-48
UniRef100_O24401 Chlorophyll a/b-binding protein WCAB precursor ... 193 1e-48
UniRef100_P14275 Chlorophyll a-b binding protein 1C, chloroplast... 193 1e-48
UniRef100_P07370 Chlorophyll a-b binding protein 1B, chloroplast... 193 1e-48
UniRef100_P14274 Chlorophyll a-b binding protein 1A, chloroplast... 193 1e-48
UniRef100_P07371 Chlorophyll a-b binding protein AB80, chloropla... 193 1e-48
>UniRef100_Q6T705 Chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 195 bits (496), Expect = 2e-49
Identities = 94/98 (95%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>UniRef100_Q41447 Chlorophyll a/b-binding protein PS II-Type I precursor [Solanum
tuberosum]
Length = 267
Score = 194 bits (494), Expect = 3e-49
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>UniRef100_Q41421 Chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 194 bits (494), Expect = 3e-49
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>UniRef100_P07369 Chlorophyll a-b binding protein 3C, chloroplast precursor
[Lycopersicon esculentum]
Length = 267
Score = 194 bits (494), Expect = 3e-49
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 267
>UniRef100_Q40185 L.gibba light-harvesting chlorophyll a/b protein precursor [Lemna
gibba]
Length = 266
Score = 194 bits (493), Expect = 4e-49
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYR+A GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>UniRef100_O81391 Chlorophyll a/b binding protein [Medicago sativa]
Length = 266
Score = 194 bits (493), Expect = 4e-49
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 228
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWA+ATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 266
>UniRef100_P14277 Chlorophyll a-b binding protein 3B, chloroplast precursor
[Lycopersicon esculentum]
Length = 267
Score = 194 bits (492), Expect = 6e-49
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADHIADPVN+NAWAFATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>UniRef100_P14276 Chlorophyll a-b binding protein 3A, chloroplast precursor
[Lycopersicon esculentum]
Length = 267
Score = 194 bits (492), Expect = 6e-49
Identities = 93/98 (94%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADHIADPVN+NAWAFATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 267
>UniRef100_P04782 Chlorophyll a-b binding protein 25, chloroplast precursor [Petunia
sp.]
Length = 266
Score = 194 bits (492), Expect = 6e-49
Identities = 91/98 (92%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYR+A GPLGEV+DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
>UniRef100_Q5ZBV8 Putative a/b-binding protein [Oryza sativa]
Length = 261
Score = 193 bits (491), Expect = 7e-49
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 164 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 223
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWA+ATNFVPGK
Sbjct: 224 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 261
>UniRef100_Q5ZBV7 A/b-binding protein-like [Oryza sativa]
Length = 98
Score = 193 bits (491), Expect = 7e-49
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 1 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 60
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWA+ATNFVPGK
Sbjct: 61 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
>UniRef100_Q8W0E6 Chlorophyll a/b binding protein [Oryza sativa]
Length = 265
Score = 193 bits (490), Expect = 1e-48
Identities = 91/98 (92%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYR+A GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>UniRef100_Q41424 Chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 193 bits (490), Expect = 1e-48
Identities = 91/98 (92%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEV+DPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWA+ATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
>UniRef100_Q41422 Chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 193 bits (490), Expect = 1e-48
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>UniRef100_O64448 Light harvesting chlorophyll a/b-binding protein precursor
[Nicotiana sylvestris]
Length = 267
Score = 193 bits (490), Expect = 1e-48
Identities = 91/98 (92%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYR+A GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 170 MGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGF 229
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWA+ATNFVPGK
Sbjct: 230 FVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 267
>UniRef100_O24401 Chlorophyll a/b-binding protein WCAB precursor [Triticum aestivum]
Length = 266
Score = 193 bits (490), Expect = 1e-48
Identities = 91/98 (92%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYR+A GPLGE+VDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 169 MGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 228
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADHIADPVN+NAWAFATNFVPGK
Sbjct: 229 FVQAIVTGKGPLENLADHIADPVNNNAWAFATNFVPGK 266
>UniRef100_P14275 Chlorophyll a-b binding protein 1C, chloroplast precursor
[Lycopersicon esculentum]
Length = 265
Score = 193 bits (490), Expect = 1e-48
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>UniRef100_P07370 Chlorophyll a-b binding protein 1B, chloroplast precursor
[Lycopersicon esculentum]
Length = 265
Score = 193 bits (490), Expect = 1e-48
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>UniRef100_P14274 Chlorophyll a-b binding protein 1A, chloroplast precursor
[Lycopersicon esculentum]
Length = 265
Score = 193 bits (490), Expect = 1e-48
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGF
Sbjct: 168 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGF 227
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAWAFATNFVPGK
Sbjct: 228 FVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 265
>UniRef100_P07371 Chlorophyll a-b binding protein AB80, chloroplast precursor [Pisum
sativum]
Length = 269
Score = 193 bits (490), Expect = 1e-48
Identities = 92/98 (93%), Positives = 96/98 (97%)
Query: 1 MGAVEGYRIADGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 60
MGAVEGYRIA GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF
Sbjct: 172 MGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGF 231
Query: 61 FVQAIVTEKGPLENLADHIADPVNSNAWAFATNFVPGK 98
FVQAIVT KGPLENLADH+ADPVN+NAW++ATNFVPGK
Sbjct: 232 FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.319 0.141 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,856,123
Number of Sequences: 2790947
Number of extensions: 6631217
Number of successful extensions: 13414
Number of sequences better than 10.0: 441
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 12644
Number of HSP's gapped (non-prelim): 750
length of query: 98
length of database: 848,049,833
effective HSP length: 74
effective length of query: 24
effective length of database: 641,519,755
effective search space: 15396474120
effective search space used: 15396474120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC139600.2