BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139600.10 + phase: 0
(81 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9LJW5 Gb|AAF15936.1 [Arabidopsis thaliana] 109 1e-23
UniRef100_Q9CA51 Hypothetical protein F1M20.34 [Arabidopsis thal... 94 7e-19
UniRef100_Q5XWM0 ZF-HD homeobox protein-like [Solanum tuberosum] 86 2e-16
UniRef100_Q9SB61 Hypothetical protein F22K18.140 [Arabidopsis th... 82 4e-15
UniRef100_Q9LXG0 Hypothetical protein F8M21_100 [Arabidopsis tha... 82 4e-15
UniRef100_Q6ER22 Hypothetical protein P0707C02.4 [Oryza sativa] 81 7e-15
UniRef100_Q9ARE3 ZF-HD homeobox protein [Flaveria bidentis] 80 1e-14
UniRef100_Q6L416 Putative ZF-HD homeobox protein [Solanum demissum] 79 2e-14
UniRef100_Q9LHF0 Arabidopsis thaliana genomic DNA, chromosome 3,... 79 4e-14
UniRef100_Q9M9S0 F14L17.21 protein [Arabidopsis thaliana] 78 5e-14
UniRef100_Q8RWR4 Hypothetical protein [Arabidopsis thaliana] 78 5e-14
UniRef100_O64722 Hypothetical protein At2g02540 [Arabidopsis tha... 78 5e-14
UniRef100_Q9SEZ1 Hypothetical protein F24J1.29 [Arabidopsis thal... 77 8e-14
UniRef100_Q9ARE5 ZF-HD homeobox protein [Flaveria bidentis] 77 1e-13
UniRef100_Q9FIW9 Arabidopsis thaliana genomic DNA, chromosome 5,... 76 2e-13
UniRef100_Q8LCV0 Hypothetical protein [Arabidopsis thaliana] 76 2e-13
UniRef100_Q6YXH5 Putative ZF-HD homeobox protein [Oryza sativa] 76 2e-13
UniRef100_Q9SVL0 Hypothetical protein F18B3.170 [Arabidopsis tha... 75 3e-13
UniRef100_Q7X7N3 OSJNBb0086G13.8 protein [Oryza sativa] 75 5e-13
UniRef100_Q8LDG1 Hypothetical protein [Arabidopsis thaliana] 75 5e-13
>UniRef100_Q9LJW5 Gb|AAF15936.1 [Arabidopsis thaliana]
Length = 100
Score = 109 bits (273), Expect = 1e-23
Identities = 60/99 (60%), Positives = 70/99 (70%), Gaps = 19/99 (19%)
Query: 1 MRKRQVVVRRS--EDPQRS----------VVKYGECQKNHAANVGGYAVDGCREFMPS-- 46
MRKRQVV+RR+ E+P RS V+YGECQKNHAA VGGYAVDGCREFM S
Sbjct: 1 MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60
Query: 47 ---TNGSLTCAACGCHRNFHKREV--EVVSESSSPHSNG 80
T +LTCAACGCHR+FH+RE+ EVV + +SP S G
Sbjct: 61 EEGTVAALTCAACGCHRSFHRREIETEVVCDCNSPPSTG 99
>UniRef100_Q9CA51 Hypothetical protein F1M20.34 [Arabidopsis thaliana]
Length = 102
Score = 94.4 bits (233), Expect = 7e-19
Identities = 51/101 (50%), Positives = 65/101 (63%), Gaps = 23/101 (22%)
Query: 1 MRKRQVVVRR-----------------SEDPQRSVVKYGECQKNHAANVGGYAVDGCREF 43
M+KRQ+V+++ S + S V+Y ECQKNHAAN+GGYAVDGCREF
Sbjct: 2 MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61
Query: 44 MPS----TNGSLTCAACGCHRNFHKREV--EVVSESSSPHS 78
M + T +L CAACGCHRNFH++EV EVV E S P++
Sbjct: 62 MAAGVEGTVDALRCAACGCHRNFHRKEVDTEVVCEYSPPNA 102
>UniRef100_Q5XWM0 ZF-HD homeobox protein-like [Solanum tuberosum]
Length = 290
Score = 85.9 bits (211), Expect = 2e-16
Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 9/71 (12%)
Query: 12 EDPQRSVVKYGECQKNHAANVGGYAVDGCREFMPSTNG------SLTCAACGCHRNFHKR 65
+ P +VV Y EC KNHAA++GG+AVDGC EFMPST SL CAACGCHRNFH+R
Sbjct: 40 QPPPCTVVIYKECLKNHAASLGGHAVDGCGEFMPSTESTPSDPISLKCAACGCHRNFHRR 99
Query: 66 EVEVVSESSSP 76
E S++SSP
Sbjct: 100 E---PSDNSSP 107
>UniRef100_Q9SB61 Hypothetical protein F22K18.140 [Arabidopsis thaliana]
Length = 220
Score = 81.6 bits (200), Expect = 4e-15
Identities = 35/56 (62%), Positives = 43/56 (76%), Gaps = 4/56 (7%)
Query: 19 VKYGECQKNHAANVGGYAVDGCREFMPS----TNGSLTCAACGCHRNFHKREVEVV 70
++Y EC KNHA N+GG+AVDGC EFMPS T +L CAACGCHRNFH++E E +
Sbjct: 47 IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESI 102
>UniRef100_Q9LXG0 Hypothetical protein F8M21_100 [Arabidopsis thaliana]
Length = 271
Score = 81.6 bits (200), Expect = 4e-15
Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 6/64 (9%)
Query: 17 SVVKYGECQKNHAANVGGYAVDGCREFMPSTN------GSLTCAACGCHRNFHKREVEVV 70
+V Y EC KNHAA +GG+A+DGC EFMPS + SLTCAACGCHRNFH+RE +
Sbjct: 52 AVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRREEDPS 111
Query: 71 SESS 74
S S+
Sbjct: 112 SLSA 115
>UniRef100_Q6ER22 Hypothetical protein P0707C02.4 [Oryza sativa]
Length = 113
Score = 80.9 bits (198), Expect = 7e-15
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 17/82 (20%)
Query: 1 MRKRQVVVRRSEDPQRSV---VKYGECQKNHAANVGGYAVDGCREFMPSTNG-------- 49
M KR VV+RR E R V+YGEC++NHAA+ GG+AVDGCREF+ + +G
Sbjct: 1 MMKRLVVLRRREPAVRFSCCGVRYGECRRNHAASTGGHAVDGCREFIAAEDGGGGNSTSA 60
Query: 50 ------SLTCAACGCHRNFHKR 65
+L CAACGCHR+FH+R
Sbjct: 61 VGVAAAALKCAACGCHRSFHRR 82
>UniRef100_Q9ARE3 ZF-HD homeobox protein [Flaveria bidentis]
Length = 339
Score = 80.1 bits (196), Expect = 1e-14
Identities = 37/64 (57%), Positives = 45/64 (69%), Gaps = 6/64 (9%)
Query: 9 RRSEDPQRSVVKYGECQKNHAANVGGYAVDGCREFMPSTNG------SLTCAACGCHRNF 62
++ + Q VV Y EC KNHAA +GG+AVDGC EFMPS + SL CAACGCHRNF
Sbjct: 57 QQQQQQQPVVVSYRECLKNHAAAMGGHAVDGCGEFMPSPSSSPTDPTSLKCAACGCHRNF 116
Query: 63 HKRE 66
H+R+
Sbjct: 117 HRRD 120
>UniRef100_Q6L416 Putative ZF-HD homeobox protein [Solanum demissum]
Length = 291
Score = 79.3 bits (194), Expect = 2e-14
Identities = 41/71 (57%), Positives = 48/71 (66%), Gaps = 9/71 (12%)
Query: 12 EDPQRSVVKYGECQKNHAANVGGYAVDGCREFM------PSTNGSLTCAACGCHRNFHKR 65
+ P + V Y EC KNHAA++GG+AVDGC EFM PS SL CAACGCHRNFH+R
Sbjct: 44 QPPPCTAVIYKECLKNHAASLGGHAVDGCGEFMLSPESTPSDPISLKCAACGCHRNFHRR 103
Query: 66 EVEVVSESSSP 76
E S+ SSP
Sbjct: 104 E---PSDDSSP 111
>UniRef100_Q9LHF0 Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYI13
[Arabidopsis thaliana]
Length = 312
Score = 78.6 bits (192), Expect = 4e-14
Identities = 37/64 (57%), Positives = 43/64 (66%), Gaps = 6/64 (9%)
Query: 19 VKYGECQKNHAANVGGYAVDGCREFMPSTNG------SLTCAACGCHRNFHKREVEVVSE 72
V Y EC KNHAA +GG+A+DGC EFMPS + SL CAACGCHRNFH+RE + S
Sbjct: 50 VTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSA 109
Query: 73 SSSP 76
P
Sbjct: 110 VPPP 113
>UniRef100_Q9M9S0 F14L17.21 protein [Arabidopsis thaliana]
Length = 312
Score = 78.2 bits (191), Expect = 5e-14
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 6/69 (8%)
Query: 15 QRSVVKYGECQKNHAANVGGYAVDGCREFMPS-TNGS---LTCAACGCHRNFHKREV--E 68
++ ++KY EC KNHAA +GG A DGC EFMPS +GS LTC+AC CHRNFH++EV E
Sbjct: 84 KKPMIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCSACNCHRNFHRKEVEGE 143
Query: 69 VVSESSSPH 77
+ + + SP+
Sbjct: 144 LAATAMSPY 152
>UniRef100_Q8RWR4 Hypothetical protein [Arabidopsis thaliana]
Length = 310
Score = 78.2 bits (191), Expect = 5e-14
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 6 VVVRRSEDPQRSVVKYGECQKNHAANVGGYAVDGCREFMPS-TNGS---LTCAACGCHRN 61
++V + + V+KY EC KNHAA +GG A+DGC EFMPS GS LTC+ C CHRN
Sbjct: 72 IMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRN 131
Query: 62 FHKREVE 68
FH+RE E
Sbjct: 132 FHRRETE 138
>UniRef100_O64722 Hypothetical protein At2g02540 [Arabidopsis thaliana]
Length = 310
Score = 78.2 bits (191), Expect = 5e-14
Identities = 37/67 (55%), Positives = 46/67 (68%), Gaps = 4/67 (5%)
Query: 6 VVVRRSEDPQRSVVKYGECQKNHAANVGGYAVDGCREFMPS-TNGS---LTCAACGCHRN 61
++V + + V+KY EC KNHAA +GG A+DGC EFMPS GS LTC+ C CHRN
Sbjct: 72 IMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRN 131
Query: 62 FHKREVE 68
FH+RE E
Sbjct: 132 FHRRETE 138
>UniRef100_Q9SEZ1 Hypothetical protein F24J1.29 [Arabidopsis thaliana]
Length = 242
Score = 77.4 bits (189), Expect = 8e-14
Identities = 35/54 (64%), Positives = 40/54 (73%), Gaps = 6/54 (11%)
Query: 19 VKYGECQKNHAANVGGYAVDGCREFMPSTN------GSLTCAACGCHRNFHKRE 66
V Y EC KNHAAN+GG+A+DGC EFMPS SL CAACGCHRNFH+R+
Sbjct: 29 VCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRD 82
>UniRef100_Q9ARE5 ZF-HD homeobox protein [Flaveria bidentis]
Length = 241
Score = 76.6 bits (187), Expect = 1e-13
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
Query: 14 PQRSVVKYGECQKNHAANVGGYAVDGCREFM------PSTNGSLTCAACGCHRNFHKREV 67
P + V Y +C KNHA +GG+AVDGC EFM PS S CAACGCHRNFH+RE
Sbjct: 10 PPHTGVAYKQCLKNHAVGIGGHAVDGCGEFMPAPTYNPSQPSSFKCAACGCHRNFHRREP 69
Query: 68 EVVSESSSPH 77
+ ++ H
Sbjct: 70 TTTTIATRTH 79
>UniRef100_Q9FIW9 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21
[Arabidopsis thaliana]
Length = 334
Score = 76.3 bits (186), Expect = 2e-13
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 6/60 (10%)
Query: 21 YGECQKNHAANVGGYAVDGCREFMPSTNG------SLTCAACGCHRNFHKREVEVVSESS 74
Y EC KNHAA +GG+A+DGC EFMPS + SL CAACGCHRNFH+R+ + ++SS
Sbjct: 56 YKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNNDSS 115
>UniRef100_Q8LCV0 Hypothetical protein [Arabidopsis thaliana]
Length = 333
Score = 76.3 bits (186), Expect = 2e-13
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 6/60 (10%)
Query: 21 YGECQKNHAANVGGYAVDGCREFMPSTNG------SLTCAACGCHRNFHKREVEVVSESS 74
Y EC KNHAA +GG+A+DGC EFMPS + SL CAACGCHRNFH+R+ + ++SS
Sbjct: 55 YKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNNDSS 114
>UniRef100_Q6YXH5 Putative ZF-HD homeobox protein [Oryza sativa]
Length = 279
Score = 75.9 bits (185), Expect = 2e-13
Identities = 36/73 (49%), Positives = 46/73 (62%), Gaps = 4/73 (5%)
Query: 10 RSEDPQRSVVKYGECQKNHAANVGGYAVDGCREFMPS----TNGSLTCAACGCHRNFHKR 65
R + P +Y EC KNHA +GG+AVDGC EFM + T +L CAAC CHRNFH++
Sbjct: 46 RVKGPSCGGGRYRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRK 105
Query: 66 EVEVVSESSSPHS 78
E E ++ SP S
Sbjct: 106 ESESLAGEGSPFS 118
>UniRef100_Q9SVL0 Hypothetical protein F18B3.170 [Arabidopsis thaliana]
Length = 249
Score = 75.5 bits (184), Expect = 3e-13
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 7 VVRRSEDPQRSV---VKYGECQKNHAANVGGYAVDGCREFM----PSTNGSLTCAACGCH 59
+ + ++ P+ V KY ECQKNHAA+ GG+ VDGC EFM T G+L CAAC CH
Sbjct: 43 IKKENQKPKTRVDQGAKYRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCH 102
Query: 60 RNFHKREVEVVSESSSPH 77
R+FH++EV S H
Sbjct: 103 RSFHRKEVYGHRNSKQDH 120
>UniRef100_Q7X7N3 OSJNBb0086G13.8 protein [Oryza sativa]
Length = 283
Score = 74.7 bits (182), Expect = 5e-13
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 20 KYGECQKNHAANVGGYAVDGCREFMPSTNGSLTCAACGCHRNFHKR 65
KY EC +NHAA +GG A DGC E+MP++ SL CAACGCHR+FH+R
Sbjct: 22 KYKECMRNHAAAMGGQAFDGCGEYMPASPDSLKCAACGCHRSFHRR 67
>UniRef100_Q8LDG1 Hypothetical protein [Arabidopsis thaliana]
Length = 249
Score = 74.7 bits (182), Expect = 5e-13
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Query: 7 VVRRSEDPQRSV---VKYGECQKNHAANVGGYAVDGCREFM----PSTNGSLTCAACGCH 59
+ + ++ P+ V KY ECQKNHAA+ GG+ VDGC EFM T G+L CAAC CH
Sbjct: 43 IKKENQKPKTRVDQGAKYRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCH 102
Query: 60 RNFHKREV 67
R+FH++EV
Sbjct: 103 RSFHRKEV 110
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.316 0.129 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,225,321
Number of Sequences: 2790947
Number of extensions: 4306084
Number of successful extensions: 8423
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8347
Number of HSP's gapped (non-prelim): 40
length of query: 81
length of database: 848,049,833
effective HSP length: 57
effective length of query: 24
effective length of database: 688,965,854
effective search space: 16535180496
effective search space used: 16535180496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Medicago: description of AC139600.10