BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139343.2 + phase: 0 /pseudo
         (443 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q69FA4 Gag-pol polyprotein [Phaseolus vulgaris]             534  e-150
UniRef100_Q94FM0 Pol polyprotein [Citrus paradisi]                    278  2e-73
UniRef100_Q6L3L8 Putative polyprotein [Solanum demissum]              240  7e-62
UniRef100_Q7XBD8 Putative retrotransposon RIRE1 poly protein [Ze...   228  2e-58
UniRef100_Q5XWL7 Pol polyprotein-like [Solanum tuberosum]             217  6e-55
UniRef100_Q7X7X3 OSJNBb0112E13.7 protein [Oryza sativa]               205  2e-51
UniRef100_Q7DNB8 OSJNBb0046K02.5 protein [Oryza sativa]               205  2e-51
UniRef100_Q7XML8 OSJNBa0040D17.9 protein [Oryza sativa]               204  4e-51
UniRef100_Q6L408 Putative polyprotein [Solanum demissum]              204  4e-51
UniRef100_Q6F2M4 Putative polyprotein [Oryza sativa]                  204  5e-51
UniRef100_Q6AT91 Putative polyprotein [Oryza sativa]                  204  5e-51
UniRef100_Q8RYS5 Putative polyprotein [Oryza sativa]                  204  5e-51
UniRef100_Q8RU93 Putative polyprotein from transposon TNT 1-94 [...   204  5e-51
UniRef100_Q7XUB8 OSJNBb0078D11.12 protein [Oryza sativa]              204  5e-51
UniRef100_Q8H7V4 Putative polyprotein from transposon TNT [Oryza...   204  5e-51
UniRef100_Q7XW90 OSJNBb0043H09.7 protein [Oryza sativa]               204  5e-51
UniRef100_Q75J10 Putative gag and pol protein [Oryza sativa]          204  5e-51
UniRef100_Q7XM54 OSJNBb0018J12.5 protein [Oryza sativa]               203  7e-51
UniRef100_Q6L5B9 Putative polyprotein [Oryza sativa]                  203  7e-51
UniRef100_Q6AUM4 Putative polyprotein [Oryza sativa]                  203  7e-51

>UniRef100_Q69FA4 Gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  534 bits (1376), Expect = e-150
 Identities = 278/449 (61%), Positives = 339/449 (74%), Gaps = 25/449 (5%)

Query: 4   ENSDNDKNKNVTDSTFSVATNPPAVVTYAKQFPDVSRIEVFKGQNFRRWNERVFTLLDVH 63
           EN +N  N N    T +V +    +  +AK FPDVS+IEVF GQNFRRW ERV TLLD++
Sbjct: 3   ENPNN--NDNTAPETSNVVSATQTI--FAKLFPDVSKIEVFTGQNFRRWQERVSTLLDMY 58

Query: 64  GVASVLTDVKPDEAKSDAKQIEKWNNANKVCRHTILSTISDALFDVYCSYKVAKDIWDNM 123
           GVA  LT  KPD   + AKQ++ W +ANKVCRHT+LS +S+ LFDVY SYK AKDIWD++
Sbjct: 59  GVAHALTTAKPDSTTA-AKQVDDWIHANKVCRHTLLSVLSNDLFDVYASYKNAKDIWDSL 117

Query: 124 NVKYTAEEATKQKFVVGNYL*WQMKEDKEIKVQINEYHQLIEELKAENIILPDVFVAAAL 183
            +KYTAE+  +Q+FV+  Y  W+M + K+IK+QINEYH+LIE++K E+I LPD FV+  L
Sbjct: 118 ILKYTAEDIVRQRFVIAKYYRWEMIKGKDIKIQINEYHKLIEDIKTESIKLPDEFVSELL 177

Query: 184 VEKLRSSWDDYKQQLKHKHKQMSLNDLIRHIIIEDTSRKECGAARAKALESRANLIQNNA 243
           +EKL  SW DYKQQLKH+ KQMSL+DLI HIIIEDT+RKEC AA+AKAL ++AN+I++  
Sbjct: 178 IEKLPQSWTDYKQQLKHRQKQMSLSDLITHIIIEDTNRKECAAAKAKALSAKANVIEDKP 237

Query: 244 RKQQRYENKSDHALKV---------TNPNFKANLGECYVCGKKGHKAYHCRYRKVNGQPP 294
              +RYE K DH  K          TNP FK   G C+VCGK GH A  CR+R  N  P 
Sbjct: 238 -APKRYEKKFDHKKKPNNKFSRPSGTNPTFKKK-GNCFVCGKPGHHAPQCRHRAKNDYP- 294

Query: 295 KPKANLTQGDDKKYDDDDVIAAVISKVHLVNDVQKWVVDSGATRHICAKREAFTSYISVG 354
            PKANL +G       +D I AV+S+V+LV +V KWVVDSGATRHICA R  FTSY SVG
Sbjct: 295 -PKANLAEG-------EDTIVAVVSQVNLVTNVSKWVVDSGATRHICANRNVFTSYTSVG 346

Query: 355 DDEDQVYLGDSRTTAVNGKGKVILKLTSGKTLALSDVLNVPTIRTNLISVALLNKVGVKV 414
           D E+QVYLGDSRTT V GKGKV+LKLTSGKTLAL+DVL+VP+IR NL+SVALL+KVGVKV
Sbjct: 347 DGEEQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVLHVPSIRVNLVSVALLSKVGVKV 406

Query: 415 SFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           SFESDK+V++KNNVFVG GYCDQGLFVL+
Sbjct: 407 SFESDKIVITKNNVFVGKGYCDQGLFVLN 435


>UniRef100_Q94FM0 Pol polyprotein [Citrus paradisi]
          Length = 701

 Score =  278 bits (711), Expect = 2e-73
 Identities = 149/410 (36%), Positives = 255/410 (61%), Gaps = 19/410 (4%)

Query: 40  RIEVFKGQNFRRWNERVFTLLDVHGVASVLTD--VKPDEAKSD---AKQIEKWNNANKVC 94
           R E F GQNF+RW +++F  L    +A  LT    KP E ++D   A  I+ W++++ +C
Sbjct: 41  RPEKFNGQNFKRWQQKMFFYLTTLNLARFLTKDAPKPKEGETDIQVASAIDAWHHSDFLC 100

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
           ++ +++ +SD+L++VY   K AK++W++++ KY  E+A  +KFVVG +L ++M + K + 
Sbjct: 101 KNYVMNGLSDSLYNVYIGKKTAKELWESLDRKYKTEDAGTKKFVVGRFLDFKMVDSKTVI 160

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q+ E   ++ E+ AE + L + F  AA++EKL  +W D+K  LKHK K+M++  L+  +
Sbjct: 161 SQVQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDFKSYLKHKQKEMNIEGLVVKL 220

Query: 215 IIEDTSRKECGAARAKALE-SRANLIQNNARKQQRYENKSDHALKVTNPNFKANLGECYV 273
            IE+ +R    A R  A+  ++AN +++  +K+++        +      F+   G+CY 
Sbjct: 221 RIEEDNR---NAERIGAISMAKANFVEHGPKKKKKKLGPKG-GISKKQTKFQ---GKCYN 273

Query: 274 CGKKGHKAYHCRYRKVNGQPPKPKANLTQGDDKKYDDDDVIAAVISKVHLVNDVQKWVVD 333
           C K GHKA  CR  K      K +AN+ +   +   D ++ A V+    + ++ ++W +D
Sbjct: 274 CDKMGHKASDCRLPK-----KKREANVVENITQHVSDINLSAVVLEVNMVGSNPREWWID 328

Query: 334 SGATRHICAKREAFTSYISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSGKTLALSDVLN 393
           +GATRH+C+ +  FTS+     + +++++G+S T+ + G+GKV LK+TSGK L L++VL 
Sbjct: 329 TGATRHVCSDKGLFTSF-EAASNREKLFMGNSATSEIEGQGKVALKMTSGKELTLNNVLY 387

Query: 394 VPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           VP IR NL+S +LLNK G ++ FESD +V+SKN ++VG GY + GLF L+
Sbjct: 388 VPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKLN 437


>UniRef100_Q6L3L8 Putative polyprotein [Solanum demissum]
          Length = 1279

 Score =  240 bits (612), Expect = 7e-62
 Identities = 145/442 (32%), Positives = 231/442 (51%), Gaps = 51/442 (11%)

Query: 37  DVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKP----------DEAKSDAKQIEK 86
           D+++   F G +F+RW  +V   L +  V+ VLT+  P          DE  S  + +EK
Sbjct: 14  DLNKPFRFNGNHFKRWKGKVLFYLSLLNVSYVLTEKNPNKVDDSSMEDDELISHHENVEK 73

Query: 87  WNNANKVCRHTILSTISDALFDVYC-SYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*W 145
           +N  +  CR+ +L+ +SD  +D Y  +Y  AK IW  +  KY  EEA  +K+    +  +
Sbjct: 74  YNGDSYKCRYYLLNCLSDNFYDYYDRTYSSAKKIWKALQSKYDTEEAGAKKYAASRFFRF 133

Query: 146 QMKEDKEIKVQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQM 205
           QM ++K +  Q  ++  ++ EL++E + + D  +   +V+KL  SW ++++ ++HK K+ 
Sbjct: 134 QMVDNKSVVDQAQDFIMIVGELRSEEVKIGDNLIVCGIVDKLPPSWKEFQKTMRHKQKET 193

Query: 206 SLNDLIRHIIIEDTSRKECGAARAKA--LESRANLIQNNARKQQRYENKSDHALKVTNPN 263
           SL  LI  I +E+ +R +    + +   + ++ NLI +N    + ++N S   LK     
Sbjct: 194 SLETLIMKIRMEEEARGQDALLQTEENNITTKVNLITSNNATPESHKNTS---LKPKKKK 250

Query: 264 FKANLGE----------------------CYVCGKKGHKAYHCRYRKVNGQPPKPKANLT 301
           FK N G                       C+VCGK GH A  CR+RK   + P P+AN+T
Sbjct: 251 FKKNNGRPPKKNNGENIQAQNQQVQDKGPCFVCGKSGHIARFCRFRK---RGPNPQANVT 307

Query: 302 QGDDKKYDDDDVIAAVISKVHLVNDVQKWVVDSGATRHICAKREAFTSYISVGDDEDQVY 361
           +         +   AVI+ +++V +V  W  DSGA RH+C  ++ F  Y    ++   + 
Sbjct: 308 E---------EPFVAVITDINMVENVDGWWADSGANRHVCYDKDWFKKYTHF-EEPKTIM 357

Query: 362 LGDSRTTAVNGKGKVILKLTSGKTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKM 421
           LGDS TT V G G V L  TSG+ L L DVL  P++R  L+S  LLNK G K   ES++ 
Sbjct: 358 LGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGFKQIIESNQY 417

Query: 422 VMSKNNVFVGNGYCDQGLFVLS 443
           V+ K  +FVG GY   G+F L+
Sbjct: 418 VIVKKGIFVGKGYACDGMFKLN 439


>UniRef100_Q7XBD8 Putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  228 bits (582), Expect = 2e-58
 Identities = 140/421 (33%), Positives = 218/421 (51%), Gaps = 29/421 (6%)

Query: 37  DVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEK---------W 87
           DV + E F G +F+RW  +    L    +  V+T   P  A  D+    K         W
Sbjct: 23  DVIKPEAFDGASFKRWQIKTRMWLTDLKLFWVVTSAVPQAASDDSDDAAKAAALAEKAKW 82

Query: 88  NNANKVCRHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQM 147
           + AN+ C   +L+ +S+ LFDVY ++  AK +W ++  +++  +   + F   NYL ++M
Sbjct: 83  DEANEACLSRLLNVLSNRLFDVYSAFTSAKGLWTDLENEFSEVDNGNESFTTENYLNYKM 142

Query: 148 KEDKEIKVQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSL 207
            E + +  Q+ E   L+ +L     +LPD F   A++ KL  SW D+    +H  KQM+L
Sbjct: 143 VEGRSVMEQLQEIQLLVRDLVQYGCVLPDSFQVNAILAKLPPSWRDFVTSRRHMKKQMTL 202

Query: 208 NDLIRHIIIEDTSRKECGAARAKALESRANLIQNNARKQQRYENKSDHALKVTNPNFKAN 267
            +L   I +E+ +R    ++   + + +A++++    ++ + + K+     +  P  K  
Sbjct: 203 TELSAAINVEERAR----SSNKPSQQLQAHVVEKGGDRKFQKKKKNSPQKNLNQPKSKKM 258

Query: 268 LGE----CYVCGKKGHKAYHCRYRKVNGQPPKPK-ANLTQGDDKKYDDDDVIAAVISKVH 322
             +    CYVCG  GH A  C+ RK  G PP+ K  N+       Y           +  
Sbjct: 259 KKKEDFICYVCGVSGHTARRCKLRKGKGPPPQRKEGNVVVNSTPGY---------ALQAF 309

Query: 323 LVNDVQKWVVDSGATRHICAKREAFTSYISVGDDEDQVYLGDSRTTAVNGKGKVILKLTS 382
           + +    W +DSGAT HICA R  F+S+   G +   V +G+    AV G G+V LKLTS
Sbjct: 310 MASPSDDWWMDSGATVHICADRSMFSSF--QGFNSAPVLMGNGVPAAVRGTGQVYLKLTS 367

Query: 383 GKTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVL 442
           GKTL L DVL VP++  NLISV+LL + G+K+ FES+K+V+SK   FVG  Y   GLF L
Sbjct: 368 GKTLVLKDVLYVPSMSRNLISVSLLCRQGLKLVFESNKVVLSKFGTFVGKSYESGGLFRL 427

Query: 443 S 443
           S
Sbjct: 428 S 428


>UniRef100_Q5XWL7 Pol polyprotein-like [Solanum tuberosum]
          Length = 557

 Score =  217 bits (552), Expect = 6e-55
 Identities = 123/354 (34%), Positives = 202/354 (56%), Gaps = 34/354 (9%)

Query: 114 KVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIKVQINEYHQLIEELKAENI- 172
           K +K++WD +  KY  E+A  +KF+V  +L ++M + K I  Q+ E   +I +L AE I 
Sbjct: 2   KTSKELWDALEKKYKTEDAGMKKFIVAKFLDYKMIDSKTIVTQVQELQVIIHDLLAEGIN 61

Query: 173 -----------------------ILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLND 209
                                  ++ D F  AA++EKL   W D+K  LKHK K+M++ D
Sbjct: 62  LFNTYVGNIKFILNTHIIFNVGLVVNDAFQMAAIIEKLPPLWKDFKNYLKHKRKEMTVED 121

Query: 210 LIRHIIIEDTSRKECGAARAKALESRANLIQNNARKQQRYENKSDHALKVTNPNFKANLG 269
           L+  + IE+ ++     +R  +  S  N+++ +  K ++ +  S      +NP  K   G
Sbjct: 122 LMVRLRIEEDNKAAEKRSRGNSAISGVNIVEEDPTKSKKRKKTSGPK---SNPPKKKFNG 178

Query: 270 ECYVCGKKGHKAYHCRYRKVNGQPPKPKANLTQGDDKKYDDDDVIAAVISKVHLVNDVQK 329
            C+ CGK+GHK   CR  K + +  K +ANL +    K + DD + A++S+ +LV + ++
Sbjct: 179 SCFNCGKRGHKTTKCRGPKKDKK--KDQANLAES---KGEMDD-LCAMLSECNLVGNPRE 232

Query: 330 WVVDSGATRHICAKREAFTSYISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSGKTLALS 389
           W +DSGA+ H+CA +E F++Y     +E ++++ +S    V G GK++LK+TSGK + L+
Sbjct: 233 WWIDSGASCHVCANKELFSTYTPAPTNE-KLFMANSAVAKVEGTGKILLKMTSGKVVTLN 291

Query: 390 DVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
            V  VP +R NL+S+ +L K G K  F SDK+V+SKN ++VG GY  +GLF L+
Sbjct: 292 RVSYVPELRKNLVSIPVLTKNGFKCVFVSDKVVVSKNEMYVGKGYLTEGLFKLN 345


>UniRef100_Q7X7X3 OSJNBb0112E13.7 protein [Oryza sativa]
          Length = 1342

 Score =  205 bits (521), Expect = 2e-51
 Identities = 138/420 (32%), Positives = 220/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFRVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A+++   +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKSDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGLGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q7DNB8 OSJNBb0046K02.5 protein [Oryza sativa]
          Length = 1356

 Score =  205 bits (521), Expect = 2e-51
 Identities = 138/420 (32%), Positives = 220/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFRVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A+++   +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKSDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGLGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q7XML8 OSJNBa0040D17.9 protein [Oryza sativa]
          Length = 1319

 Score =  204 bits (519), Expect = 4e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTMWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPSVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q6L408 Putative polyprotein [Solanum demissum]
          Length = 1415

 Score =  204 bits (519), Expect = 4e-51
 Identities = 115/295 (38%), Positives = 170/295 (56%), Gaps = 36/295 (12%)

Query: 149 EDKEIKVQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLN 208
           + K +  Q+ E   +  +L AE++++ + F  AA++EKL  SW+D+K  LKHK K+M L 
Sbjct: 266 DSKTVGSQVQELQLIFHDLIAEDMVVNEAFQVAAMIEKLPPSWNDFKNYLKHKRKEMKLE 325

Query: 209 DLIRHIIIEDTSRKECGAARAKALESRANLIQNNARKQQRYENKSDHALKVTNPNFKANL 268
           DL+  + IE+ ++                     A K+ R E             FK N 
Sbjct: 326 DLVIRLKIEEDNK--------------------TAEKKSRQEK------------FKGN- 352

Query: 269 GECYVCGKKGHKAYHCRYRKVNGQPPKPKANLTQGDDKKYDDDDVIAAVISKVHLVNDVQ 328
             CY CGK GHK+  CR  + +    K K        ++ +D D +  +IS+ +LV + +
Sbjct: 353 --CYNCGKAGHKSSDCRAPRKDKDKDKGKGKSQANIVEEMEDADDLCGMISECNLVGNPK 410

Query: 329 KWVVDSGATRHICAKREAFTSYISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSGKTLAL 388
           +W +DSGATRHIC+ +E F +Y  V  DED +++G++ TT + G GKV+LK+TSGK L L
Sbjct: 411 EWFLDSGATRHICSAKEVFATYTHVEVDED-LFMGNTTTTRIAGTGKVMLKMTSGKVLTL 469

Query: 389 SDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           ++VL+VPTIR NL+ VALL K G K    SDK V+SKN +F+G GY  +GLF L+
Sbjct: 470 NNVLHVPTIRKNLVYVALLVKNGFKCVLVSDKTVISKNEMFLGKGYLTEGLFKLN 524


>UniRef100_Q6F2M4 Putative polyprotein [Oryza sativa]
          Length = 1320

 Score =  204 bits (518), Expect = 5e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q6AT91 Putative polyprotein [Oryza sativa]
          Length = 1320

 Score =  204 bits (518), Expect = 5e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q8RYS5 Putative polyprotein [Oryza sativa]
          Length = 1320

 Score =  204 bits (518), Expect = 5e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q8RU93 Putative polyprotein from transposon TNT 1-94 [Oryza sativa]
          Length = 1302

 Score =  204 bits (518), Expect = 5e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q7XUB8 OSJNBb0078D11.12 protein [Oryza sativa]
          Length = 1320

 Score =  204 bits (518), Expect = 5e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q8H7V4 Putative polyprotein from transposon TNT [Oryza sativa]
          Length = 1911

 Score =  204 bits (518), Expect = 5e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q7XW90 OSJNBb0043H09.7 protein [Oryza sativa]
          Length = 1302

 Score =  204 bits (518), Expect = 5e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q75J10 Putative gag and pol protein [Oryza sativa]
          Length = 1302

 Score =  204 bits (518), Expect = 5e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q7XM54 OSJNBb0018J12.5 protein [Oryza sativa]
          Length = 1320

 Score =  203 bits (517), Expect = 7e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQIGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q6L5B9 Putative polyprotein [Oryza sativa]
          Length = 1302

 Score =  203 bits (517), Expect = 7e-51
 Identities = 138/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 4   FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 61

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     A ++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 62  VGCILSVLGDRLVEVYMHMTDANELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 121

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL SSW  +   LKHK ++ S+  LI  +
Sbjct: 122 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPSSWRSFGTALKHKRQEYSVEGLIASL 181

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 182 DVEEKAREKDAASKDDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 241

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 242 CFVCGQVGHLARKCSQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 294

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W VD+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 295 NQSTNWWVDTGANVHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 351

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 352 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 411


>UniRef100_Q6AUM4 Putative polyprotein [Oryza sativa]
          Length = 1861

 Score =  203 bits (517), Expect = 7e-51
 Identities = 137/420 (32%), Positives = 219/420 (51%), Gaps = 23/420 (5%)

Query: 35  FPDVSRIEVFKGQNFRRWNERVFTLLDVHGVASVLTDVKPDEAKSDAKQIEKWNNANKVC 94
           F D  R + F G +F+RW  RV   L       V T  KP E    A+Q +++  A  + 
Sbjct: 418 FADALRPDKFTGVHFKRWQIRVTLWLTAMKCFWVSTG-KP-EGVLTAEQQKQFEEATTLF 475

Query: 95  RHTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVVGNYL*WQMKEDKEIK 154
              ILS + D L +VY     AK++WD +N K+ A +A+   +++  +  ++M +++ + 
Sbjct: 476 VGCILSVLGDRLVEVYMHMTDAKELWDALNTKFGATDASNDLYIMEQFHDYKMADNRSVV 535

Query: 155 VQINEYHQLIEELKAENIILPDVFVAAALVEKLRSSWDDYKQQLKHKHKQMSLNDLIRHI 214
            Q +E   + +EL+    +LPD FVA  ++ KL  SW  +   LKHK ++ S+  LI  +
Sbjct: 536 EQAHEIQTMAKELELLKCVLPDKFVAGCIIAKLPPSWRSFGTALKHKRQEYSVEGLIASL 595

Query: 215 IIEDTSRKECGAARAKALESRANLI---QNNAR-KQQRYENKSDHALKVTNPNFKANLGE 270
            +E+ +R++  A++    +S AN++   QN ++ K +  +  +    K  N N   +   
Sbjct: 596 DVEEKAREKDAASKGDGGQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKNNNNPNQDERT 655

Query: 271 CYVCGKKGHKAYHCRYRKVNGQP---PKPKANLT---QGDDKKYDDDDVIAAVISKVHLV 324
           C+VCG+ GH A  C  RK    P       AN+T    GD   Y +       +  V  V
Sbjct: 656 CFVCGQVGHLARKCPQRKGMKAPAGQTSKSANVTIGNTGDGSGYGN-------LPTVFSV 708

Query: 325 NDVQKWVVDSGATRHICAKREAFTSY-ISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSG 383
           N    W +D+GA  H+CA    F+SY ++ G     V +G+    +V+G G V LK TSG
Sbjct: 709 NQSTNWWIDTGANIHVCADISLFSSYQVARG---STVLMGNGSHASVHGVGTVDLKFTSG 765

Query: 384 KTLALSDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVLS 443
           K + L +V +VP+I  NL+S + L + G K+ FES+K+V+SK+  F+G GY   GLF  S
Sbjct: 766 KIVQLKNVQHVPSIDRNLVSGSRLTRDGFKLVFESNKVVVSKHGYFIGKGYECGGLFRFS 825


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.317    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 736,648,109
Number of Sequences: 2790947
Number of extensions: 30573806
Number of successful extensions: 95939
Number of sequences better than 10.0: 619
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 317
Number of HSP's that attempted gapping in prelim test: 94565
Number of HSP's gapped (non-prelim): 875
length of query: 443
length of database: 848,049,833
effective HSP length: 130
effective length of query: 313
effective length of database: 485,226,723
effective search space: 151875964299
effective search space used: 151875964299
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)