Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC137546.8 + phase: 0 /pseudo
         (374 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_O23757 Reverse transcriptase [Beta vulgaris subsp. vul...   271  2e-71
UniRef100_Q8H911 Putative reverse transcriptase [Oryza sativa]        198  2e-49
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip...   195  2e-48
UniRef100_O81517 T24M8.8 protein [Arabidopsis thaliana]               194  4e-48
UniRef100_Q7XME3 OSJNBa0061G20.16 protein [Oryza sativa]              191  4e-47
UniRef100_Q84Q63 Putative reverse transcriptase [Oryza sativa]        189  8e-47
UniRef100_Q8H044 Putative reverse transcriptase [Oryza sativa]        189  1e-46
UniRef100_Q65WR1 Putative polyprotein [Oryza sativa]                  188  2e-46
UniRef100_Q9LRU8 Non-LTR retroelement reverse transcriptase-like...   187  3e-46
UniRef100_Q7DLW4 Non-ltr retrotransposon reverse transcriptase-l...   187  3e-46
UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]       185  2e-45
UniRef100_Q7XKK3 OSJNBa0038O10.4 protein [Oryza sativa]               184  5e-45
UniRef100_Q7X5Z1 OSJNBa0006A01.14 protein [Oryza sativa]              183  6e-45
UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [A...   183  8e-45
UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcrip...   182  1e-44
UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcrip...   182  1e-44
UniRef100_O22220 Putative non-LTR retroelement reverse transcrip...   182  2e-44
UniRef100_Q9FYK1 F21J9.30 [Arabidopsis thaliana]                      181  4e-44
UniRef100_Q9FXJ5 F5A9.24 [Arabidopsis thaliana]                       181  4e-44
UniRef100_Q60EL0 Hypothetical protein OSJNBa0032D15.6 [Oryza sat...   180  5e-44

>UniRef100_O23757 Reverse transcriptase [Beta vulgaris subsp. vulgaris]
          Length = 507

 Score =  271 bits (694), Expect = 2e-71
 Identities = 133/295 (45%), Positives = 191/295 (64%)

Query: 80  SRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFMSH 139
           SR  W++EGD N+++FH+L + RR  N +  +  E   I     ++     +F   F   
Sbjct: 212 SRARWIKEGDSNTRYFHTLATIRRHKNHLQYIKTEGKNISKPGEIKEEAVAYFQHIFAEE 271

Query: 140 NVVRPSVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIKEFWI 199
              RP  + L F  LS +E   LI PF+ +E+ EA+   D+ K+ GPDG NF FIK  W 
Sbjct: 272 FSTRPVFNGLNFNKLSESECSSLIAPFTHEEIDEAVDSCDAQKAPGPDGFNFKFIKSSWE 331

Query: 200 VLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKIIAKLL 259
           V+K DI + V +F  +G L  G N+ FI LI K  +P+  N+FRPIS+VG + KIIAK+L
Sbjct: 332 VIKKDIYKIVEDFWASGSLPHGCNSAFIALIPKTQHPRGFNEFRPISMVGCLYKIIAKIL 391

Query: 260 ANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKKDLMLFKVDFEKTYDSV 319
           A RL+ V+  ++   QS+F+K RQILDG+LIA+E++D   ++K + ++ K+DF K +DS+
Sbjct: 392 ARRLQRVMDHLIGPYQSSFIKGRQILDGVLIASELIDSCRRMKNEAVVLKLDFHKAFDSI 451

Query: 320 DWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDPL 374
            W YL  VL  M+FP++WR WIR CV +A+A+VL+NGSP+  F L+RGLRQGDPL
Sbjct: 452 SWNYLEWVLCQMNFPLVWRSWIRSCVMSASAAVLINGSPSSVFKLQRGLRQGDPL 506


>UniRef100_Q8H911 Putative reverse transcriptase [Oryza sativa]
          Length = 820

 Score =  198 bits (504), Expect = 2e-49
 Identities = 113/298 (37%), Positives = 162/298 (53%), Gaps = 2/298 (0%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFM 137
           Q SR  WL+EGD N++FFH  M++RRR N I  +  +   +   E     +  HF    +
Sbjct: 110 QASRVKWLKEGDANTRFFHIKMNARRRKNFIHCLQQDGNTLHTHEDKAAHLHAHF-NSIL 168

Query: 138 SHNVVRPSVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIKEF 197
                R    N +   LS  + + + +PF+ DE+ EAI +    K+ GPD     F K  
Sbjct: 169 GTRRQRGCTLNWEALRLSTIQDDSMDEPFTEDEIWEAIKNSPKEKAPGPDDFTGAFYKNC 228

Query: 198 WIVLKDDIMQFVSEFHR-NGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKIIA 256
           W ++K +I+   + FH   G     IN   I L+ K D+P+ +NDFRPISL+ S+ K+I+
Sbjct: 229 WHIIKKEIVDVFASFHNLTGGNFGSINRAMITLLPKKDSPRSMNDFRPISLIHSVAKLIS 288

Query: 257 KLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKKDLMLFKVDFEKTY 316
           K LA RL   +G +VS  QSAF+KKR I D  L    +       +K  + FK+D  K +
Sbjct: 289 KTLAMRLAARLGDLVSHAQSAFIKKRCIQDNFLYVRNMARSLHMQRKPSLFFKLDITKAF 348

Query: 317 DSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDPL 374
           DSV W YL E+L+C  F   WR WI   + TA++ +L+NG   +    +RGLRQGDPL
Sbjct: 349 DSVSWEYLVEMLQCRGFSQHWRNWIVLLLSTASSRILLNGIAGEPTTHRRGLRQGDPL 406


>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  195 bits (495), Expect = 2e-48
 Identities = 114/305 (37%), Positives = 174/305 (56%), Gaps = 8/305 (2%)

Query: 77  WQQ-SRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRI-EGVEPVRNAIFTHFAQ 134
           WQ+ SR  W+R GD N+K+FH+   +RR  N I  ++ E+ R     E +      +F +
Sbjct: 336 WQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKK 395

Query: 135 HFMSHNVVRPSVSNLQFQALSVTE--GEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFG 192
            F S +V   +V  L+     V++     L+ P + +EV+ A    +  K  GPDG+N  
Sbjct: 396 LFASEDVGY-TVEELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGF 454

Query: 193 FIKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMN 252
             ++FW  + D I + V  F R+G + +G+N T I LI K+   +++ DFRPISL   + 
Sbjct: 455 LYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIY 514

Query: 253 KIIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEV---VDEAFKLKKDLMLFK 309
           K+I KL+ANRL+ ++ S++SETQ+AFVK R I D ILIA+E+   +    K  ++ +  K
Sbjct: 515 KVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIK 574

Query: 310 VDFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLR 369
            D  K YD V+W +L + ++ + F   W + I ECV +    VL+NG+P  E    RGLR
Sbjct: 575 TDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLR 634

Query: 370 QGDPL 374
           QGDPL
Sbjct: 635 QGDPL 639


>UniRef100_O81517 T24M8.8 protein [Arabidopsis thaliana]
          Length = 1164

 Score =  194 bits (492), Expect = 4e-48
 Identities = 113/316 (35%), Positives = 176/316 (54%), Gaps = 8/316 (2%)

Query: 66  RFIP*LNTSICWQQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDV--RIEGVEP 123
           R +     S  +Q+SR +WLREGDMNS +FH + S+R+  N I   L + V  RIEG + 
Sbjct: 239 RILAEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHI-HFLSDPVGDRIEGQQN 297

Query: 124 VRNAIFTHFAQHFMSHNVV----RPSVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYD 179
           + N    +F  +  S   +    +  +SNL     S  +   L  PFS +++K A     
Sbjct: 298 LENHCVEYFQSNLGSEQGLPLFEQADISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLP 357

Query: 180 SFKSSGPDGVNFGFIKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRL 239
             K+SGPDG +  F    W ++  ++ + + EF  +GKL K  N T +VLI K+ N   +
Sbjct: 358 RNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSM 417

Query: 240 NDFRPISLVGSMNKIIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAF 299
           +DFRPIS + ++ K+I+KLL +RL+  + + +S +QSAF+  R  L+ +L+A E+V    
Sbjct: 418 SDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYN 477

Query: 300 KLK-KDLMLFKVDFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSP 358
           K       + KVD  K +DSV W ++   L+ ++ P  +  WI EC+ TA+ SV++NG  
Sbjct: 478 KKNIAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHS 537

Query: 359 TDEFPLKRGLRQGDPL 374
              F   +GLRQGDP+
Sbjct: 538 AGHFWSSKGLRQGDPM 553


>UniRef100_Q7XME3 OSJNBa0061G20.16 protein [Oryza sativa]
          Length = 1285

 Score =  191 bits (484), Expect = 4e-47
 Identities = 116/302 (38%), Positives = 162/302 (53%), Gaps = 5/302 (1%)

Query: 78   QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQH-F 136
            Q+SR +WL+EGD N++FFHS    R + N I  +  E+  I  +  V   + T + Q  +
Sbjct: 890  QRSRVNWLKEGDRNTRFFHSRAVWRAKKNKISKLRDENGAIHSMTSVLETMATEYFQEVY 949

Query: 137  MSHNVVRP-SVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIK 195
             +   + P SV+ L  + ++    E L + F  +E+ +AI      KS GPDG    F +
Sbjct: 950  KADPSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPGPDGFPARFYQ 1009

Query: 196  EFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKII 255
              W  LK DI+  V  F ++G + +G+N T IVLI K D P  L D+RPISL   + K++
Sbjct: 1010 RNWGTLKSDIILAVRNFFQSGLMPEGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVV 1069

Query: 256  AKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKK---DLMLFKVDF 312
            +K L NRLR ++  +VS+ QSAF++ R I D  L+A E      K KK       +K+D 
Sbjct: 1070 SKCLVNRLRPILDDLVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDL 1129

Query: 313  EKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGD 372
             K YD VDW +L   L  + F   W  WI  CV T   SV  NG+    F   RGLRQGD
Sbjct: 1130 SKAYDRVDWRFLELALNKLGFAHRWVSWIMSCVTTVRYSVKFNGTLLRSFAPTRGLRQGD 1189

Query: 373  PL 374
            PL
Sbjct: 1190 PL 1191


>UniRef100_Q84Q63 Putative reverse transcriptase [Oryza sativa]
          Length = 870

 Score =  189 bits (481), Expect = 8e-47
 Identities = 114/298 (38%), Positives = 168/298 (56%), Gaps = 2/298 (0%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFM 137
           Q SR   +REGD N+KFFH  +++RRR NTI  +  +           + I  HFA  FM
Sbjct: 352 QASRVTHIREGDANTKFFHLKVNARRRRNTIQRLKKDSGWAVTHGEKESTIHDHFAS-FM 410

Query: 138 SHNVVRPSVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIKEF 197
                RP+  N +   +++ +   L +PF+ +EV  AI +  + K+ GPDG    F K  
Sbjct: 411 GRPGPRPNELNWETLDITLIDLATLGEPFTEEEVHRAIKEMPADKAPGPDGFTGAFFKVC 470

Query: 198 WIVLKDDIMQ-FVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKIIA 256
           W ++KDDI+  F S ++        +N+  IVLI K D  + ++D+RPISL+ S+ KI A
Sbjct: 471 WEIIKDDILLVFSSIYNLRCAHLNLLNSANIVLIPKKDGAESVSDYRPISLIHSIAKIFA 530

Query: 257 KLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKKDLMLFKVDFEKTY 316
           K+LA RLR  +  ++S  QSAF+K R I D  L    +     +L++ ++LFK+D  K +
Sbjct: 531 KMLALRLRPHMHELISVNQSAFIKGRSIHDNYLFVRNMTRRYHRLRRAMLLFKLDITKAF 590

Query: 317 DSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDPL 374
           DSV W YL  +L+   FP  W  W+   + ++T+ VL+NGSP       RGLRQGDPL
Sbjct: 591 DSVRWDYLLALLQRKGFPTRWIDWLGALLSSSTSQVLLNGSPGQRIKHGRGLRQGDPL 648


>UniRef100_Q8H044 Putative reverse transcriptase [Oryza sativa]
          Length = 1183

 Score =  189 bits (480), Expect = 1e-46
 Identities = 117/298 (39%), Positives = 167/298 (55%), Gaps = 2/298 (0%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFM 137
           Q SR   +REGD N+KFFH  ++ R+R NTI  +  ++          + I  HFA  FM
Sbjct: 77  QASRVTHIREGDANTKFFHLKINVRKRKNTIQRLRKDNGWAVTHGEKESTIHDHFAS-FM 135

Query: 138 SHNVVRPSVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIKEF 197
             +  RP+  N +   +   +   L KPFS +EV  AI +  + K+ GPDG    F K  
Sbjct: 136 GRSGPRPNELNWEALDIMPVDLATLGKPFSEEEVHRAIKEMPADKAPGPDGFTGAFFKAC 195

Query: 198 WIVLKDDIMQ-FVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKIIA 256
           W ++K+DI+  F S F+        IN+  IVLI K D  + ++D+RPISL+ S+ KI +
Sbjct: 196 WEIIKEDILLVFNSIFNLRCAHLNLINSANIVLIPKKDGAESVSDYRPISLIHSIAKIFS 255

Query: 257 KLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKKDLMLFKVDFEKTY 316
           KLLA RLR  + +++S  QSAF+K R I D  L    +     +L++  +LFK+D  K +
Sbjct: 256 KLLALRLRPHMHALISVNQSAFIKGRSIHDNFLFVWNMARSYHRLRRAKLLFKLDITKAF 315

Query: 317 DSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDPL 374
           DSV W YL  +L+   FP  W  W+   + T+T+ VL+NGSP       RGLRQGDPL
Sbjct: 316 DSVRWDYLLALLQQRGFPTRWVDWLGALLSTSTSQVLLNGSPGQRIKHGRGLRQGDPL 373


>UniRef100_Q65WR1 Putative polyprotein [Oryza sativa]
          Length = 1023

 Score =  188 bits (477), Expect = 2e-46
 Identities = 114/298 (38%), Positives = 167/298 (55%), Gaps = 2/298 (0%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFM 137
           Q SR   +REGD N+KFFH  +++RRR NTI  +  +             I  HFA  FM
Sbjct: 186 QASRVTHIREGDANTKFFHLRVNARRRRNTIQRLKKDSGWAVTHGEKELTIHDHFAS-FM 244

Query: 138 SHNVVRPSVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIKEF 197
                RP+  N +   ++  +   L +PF+ +EV  AI +  + K+ GPDG    F K  
Sbjct: 245 GRPGPRPNELNWETLDITPIDLATLGEPFTEEEVHRAIKEMPADKAPGPDGFTGAFFKVC 304

Query: 198 WIVLKDDIMQ-FVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKIIA 256
           W ++KDDI+  F S ++        +N+  IVLI K D  + ++D+RPISL+ S+ KI A
Sbjct: 305 WEIIKDDILLVFSSIYNLRCAHLNLLNSANIVLIPKKDGAESVSDYRPISLIHSIAKIFA 364

Query: 257 KLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKKDLMLFKVDFEKTY 316
           K+LA RLR  +  ++S  QSAF+K R I D  L    ++    +L++ ++LFK+D  K +
Sbjct: 365 KMLALRLRPHMHELISVNQSAFIKGRSIHDNYLFVRNMIRRYHRLRRAMLLFKLDITKAF 424

Query: 317 DSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDPL 374
           DSV W YL  +L+   FP  W  W+   + ++T+ VL+NGSP       RGLRQGDPL
Sbjct: 425 DSVRWDYLLALLQRKGFPTRWIDWLGALLSSSTSQVLLNGSPGQRIKHGRGLRQGDPL 482


>UniRef100_Q9LRU8 Non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  187 bits (476), Expect = 3e-46
 Identities = 112/309 (36%), Positives = 171/309 (55%), Gaps = 14/309 (4%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDV--RIEGVEPVRNAIFTHFAQH 135
           Q+S   WL EGD N+ +FH +   R+  NTI + L++D   RIE  + ++  I  H    
Sbjct: 351 QKSSISWLYEGDNNTAYFHKMADMRKSINTI-NFLIDDFGERIETQQGIKEGIKEHSCNF 409

Query: 136 FMS-------HNVVRPSVSNLQFQ-ALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPD 187
           F S        N +  S  NL      SV +   L + FS  +++EA       K+SGPD
Sbjct: 410 FESLLCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPD 469

Query: 188 GVNFGFIKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISL 247
           G +  F K  W V+  ++ + V EF R+G+L K  N T +VLI K+ N  ++ DFRPIS 
Sbjct: 470 GYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISC 529

Query: 248 VGSMNKIIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLK--KDL 305
           + ++ K+IAKLL +RL+ ++  V+S +QSAF+  R + + +L+A E+V   +  K     
Sbjct: 530 LNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIV-HGYNTKNISSR 588

Query: 306 MLFKVDFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLK 365
            + KVD  K +DSV W ++    + ++ P  +  WI +C+ T   SV+VNGS +  F   
Sbjct: 589 GMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSN 648

Query: 366 RGLRQGDPL 374
           +GLRQGDPL
Sbjct: 649 KGLRQGDPL 657


>UniRef100_Q7DLW4 Non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  187 bits (476), Expect = 3e-46
 Identities = 112/309 (36%), Positives = 171/309 (55%), Gaps = 14/309 (4%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDV--RIEGVEPVRNAIFTHFAQH 135
           Q+S   WL EGD N+ +FH +   R+  NTI + L++D   RIE  + ++  I  H    
Sbjct: 351 QKSSISWLYEGDNNTAYFHKMADMRKSINTI-NFLIDDFGERIETQQGIKEGIKEHSCNF 409

Query: 136 FMS-------HNVVRPSVSNLQFQ-ALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPD 187
           F S        N +  S  NL      SV +   L + FS  +++EA       K+SGPD
Sbjct: 410 FESLLCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFSLPRNKASGPD 469

Query: 188 GVNFGFIKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISL 247
           G +  F K  W V+  ++ + V EF R+G+L K  N T +VLI K+ N  ++ DFRPIS 
Sbjct: 470 GYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISC 529

Query: 248 VGSMNKIIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLK--KDL 305
           + ++ K+IAKLL +RL+ ++  V+S +QSAF+  R + + +L+A E+V   +  K     
Sbjct: 530 LNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIV-HGYNTKNISSR 588

Query: 306 MLFKVDFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLK 365
            + KVD  K +DSV W ++    + ++ P  +  WI +C+ T   SV+VNGS +  F   
Sbjct: 589 GMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSN 648

Query: 366 RGLRQGDPL 374
           +GLRQGDPL
Sbjct: 649 KGLRQGDPL 657


>UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]
          Length = 1936

 Score =  185 bits (470), Expect = 2e-45
 Identities = 115/302 (38%), Positives = 160/302 (52%), Gaps = 5/302 (1%)

Query: 78   QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQH-F 136
            Q+SR +WL+EGD N++FFHS    R + N I  +  E+  I     V   + T + Q  +
Sbjct: 978  QRSRVNWLKEGDRNTRFFHSRAVWRAKKNKISKLRDENGAIHSTTSVLETMATEYFQGVY 1037

Query: 137  MSHNVVRP-SVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIK 195
             +   + P SV+ L  + ++    E L + F  +E+ +AI      KS  PDG    F +
Sbjct: 1038 KADPSLNPESVTRLFQEKVTDAMNEKLCQEFKEEEIAQAIFQIGPLKSPRPDGFPARFYQ 1097

Query: 196  EFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKII 255
              W  LK DI+  V  F ++G + KG+N T IVLI K D P  L D+RPISL   + K++
Sbjct: 1098 RNWGTLKSDIILAVRNFFQSGLMPKGVNDTAIVLIPKKDQPIDLKDYRPISLCNVVYKVV 1157

Query: 256  AKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKK---DLMLFKVDF 312
            +K L NRLR ++  +VS+ QSAF++ R I D  L+A E      K KK       +K+D 
Sbjct: 1158 SKCLVNRLRPILDDLVSKEQSAFIQGRMITDNALLAFECFHSIQKNKKANSAACAYKLDL 1217

Query: 313  EKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGD 372
             K YD VDW +L   L  + F   W  WI  CV T   SV  NG+    F   RGLRQG+
Sbjct: 1218 SKAYDRVDWRFLELALNKLGFAHRWVSWIMLCVTTVRYSVKFNGTLLRSFAPTRGLRQGE 1277

Query: 373  PL 374
            PL
Sbjct: 1278 PL 1279


>UniRef100_Q7XKK3 OSJNBa0038O10.4 protein [Oryza sativa]
          Length = 1045

 Score =  184 bits (466), Expect = 5e-45
 Identities = 115/300 (38%), Positives = 167/300 (55%), Gaps = 6/300 (2%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFM 137
           Q SR   +REG+ N+KFFH  +++RRR N+I  +  E+      +     I  HFA H M
Sbjct: 302 QASRLTHIREGEANTKFFHLRVNTRRRKNSIQRLRKENGWAVTHDEKEMTILDHFA-HLM 360

Query: 138 SHNVVRPSVSNLQFQALSVTEGE--GLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIK 195
                 P  + L ++AL +   +   L +PFS  E+  AI +    KS GPDG    F K
Sbjct: 361 GRP--GPRTNELNWEALDIQPFDLSTLEEPFSEQEIHRAIKEMPVDKSPGPDGYTGIFFK 418

Query: 196 EFWIVLKDDI-MQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKI 254
             W ++K+D+ + F S F+        +N   IVLI K +  + ++D+RPISL+ S+ KI
Sbjct: 419 SCWDIVKEDVSLVFNSIFNLRCASLGLLNLANIVLIPKKEGAESVSDYRPISLIHSIAKI 478

Query: 255 IAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKKDLMLFKVDFEK 314
            +KLLA RLR  + S+VS  QSAF+K R I D  L    +     +  + ++LFK+D  K
Sbjct: 479 FSKLLALRLRPHMRSLVSINQSAFIKGRSIHDNFLFVRNMARRFHRTNRPMLLFKLDITK 538

Query: 315 TYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDPL 374
            +DS+ W YL  +L+ + FPV WR W+   + T+T+ VL+NG P       RGLRQGDPL
Sbjct: 539 AFDSIRWDYLMALLQRLGFPVKWRYWLGALLYTSTSQVLLNGIPGQRITHGRGLRQGDPL 598


>UniRef100_Q7X5Z1 OSJNBa0006A01.14 protein [Oryza sativa]
          Length = 1189

 Score =  183 bits (465), Expect = 6e-45
 Identities = 112/298 (37%), Positives = 165/298 (54%), Gaps = 2/298 (0%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFM 137
           Q SR   +REGD N+KFFH  +++RRR NTI  +  +             I  HFA  FM
Sbjct: 352 QASRVTHIREGDANTKFFHLKVNARRRRNTIQRLKKDSGWAVTHGDKELTIHDHFAS-FM 410

Query: 138 SHNVVRPSVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIKEF 197
                RP+  N +   ++  +   L +PF+ +EV +AI +  + K+ GPDG    F K  
Sbjct: 411 GRPGPRPNELNWETLDITPIDLATLGEPFTEEEVHKAIKEMPADKAPGPDGFTGAFFKVC 470

Query: 198 WIVLKDDIMQ-FVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKIIA 256
           W ++KDDI+  F S ++        +N+  IVLI K D  + ++D+RPISL+ S+ KI A
Sbjct: 471 WEIIKDDILLVFSSIYNLRCAHLNLLNSANIVLIPKKDGAESVSDYRPISLIHSIAKIFA 530

Query: 257 KLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKKDLMLFKVDFEKTY 316
           K+LA RLR  +  ++S  QSAF+K R I D  L     +    + ++ ++LFK+D  K +
Sbjct: 531 KMLALRLRPHMHELISVNQSAFIKGRSIHDNYLFVRNTIRRYHRQRRAMLLFKLDITKAF 590

Query: 317 DSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDPL 374
           DSV W YL  +L+   FP  W  W+   + ++ + VL+NGSP       RGLRQGDPL
Sbjct: 591 DSVRWDYLLALLQRKGFPTRWIDWLGALLSSSISQVLLNGSPGQRIKHGRGLRQGDPL 648


>UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  183 bits (464), Expect = 8e-45
 Identities = 111/304 (36%), Positives = 164/304 (53%), Gaps = 7/304 (2%)

Query: 77  WQQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEP--VRNAIFTHFAQ 134
           +Q+SR+ W++ GD NSKFFH+L   RR  N I   L ++  I  +E   ++N   ++F  
Sbjct: 121 YQKSRSLWMKLGDNNSKFFHALTKQRRARNRITG-LHDENGIWSIEDDDIQNIAVSYFQN 179

Query: 135 HFMSHNVVRPSVSNLQFQALSVTEGEGLIKPFSVD-EVKEAICDYDSFKSSGPDGVNFGF 193
            F + N      +  + Q L       L+   + + EV+ A+      K+ GPDG+   F
Sbjct: 180 LFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGPDGMTALF 239

Query: 194 IKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNK 253
            ++ W ++K D++  V+ F + G   K +NTT I LI K + P R+ + RPISL     K
Sbjct: 240 FQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGYK 299

Query: 254 IIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEV---VDEAFKLKKDLMLFKV 310
           +I+K+L  RL+ V+ +++SETQSAFV  R I D ILIA E+   +      K   M  K 
Sbjct: 300 VISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKDKFMAIKT 359

Query: 311 DFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQ 370
           D  K YD V+W ++  +L+ M F   W  WI  C+ T    VL+NG P      +RGLRQ
Sbjct: 360 DMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQ 419

Query: 371 GDPL 374
           GDPL
Sbjct: 420 GDPL 423


>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  182 bits (463), Expect = 1e-44
 Identities = 105/306 (34%), Positives = 166/306 (53%), Gaps = 6/306 (1%)

Query: 75   ICWQQ-SRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRI-EGVEPVRNAIFTHF 132
            I W+Q SRN W++EGD N+ +FH+   +R   N + +++ +  R+  G + + N     F
Sbjct: 716  IYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFF 775

Query: 133  AQHFMSHNVVRPSVSNLQFQA-LSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNF 191
               F ++ +    +    F++ ++ T    L K FS  E+ +AIC     K+ GPDG+  
Sbjct: 776  TNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTA 835

Query: 192  GFIKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSM 251
             F K  W ++  D++  V +F     +   IN T I +I K+ NP  L+D+RPI+L   +
Sbjct: 836  RFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVL 895

Query: 252  NKIIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDE---AFKLKKDLMLF 308
             K+I+K L NRL+  + S+VS++Q+AF+  R I D ++IA+EV+       ++ K  M  
Sbjct: 896  YKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAV 955

Query: 309  KVDFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGL 368
            K D  K YD V+W +L   ++   F   W  WI   V +   SVL+NGSP       RG+
Sbjct: 956  KTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGI 1015

Query: 369  RQGDPL 374
            RQGDPL
Sbjct: 1016 RQGDPL 1021


>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score =  182 bits (463), Expect = 1e-44
 Identities = 105/306 (34%), Positives = 166/306 (53%), Gaps = 6/306 (1%)

Query: 75  ICWQQ-SRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRI-EGVEPVRNAIFTHF 132
           I W+Q SRN W++EGD N+ +FH+   +R   N + +++ +  R+  G + + N     F
Sbjct: 490 IYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFF 549

Query: 133 AQHFMSHNVVRPSVSNLQFQA-LSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNF 191
              F ++ +    +    F++ ++ T    L K FS  E+ +AIC     K+ GPDG+  
Sbjct: 550 TNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTA 609

Query: 192 GFIKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSM 251
            F K  W ++  D++  V +F     +   IN T I +I K+ NP  L+D+RPI+L   +
Sbjct: 610 RFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVL 669

Query: 252 NKIIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDE---AFKLKKDLMLF 308
            K+I+K L NRL+  + S+VS++Q+AF+  R I D ++IA+EV+       ++ K  M  
Sbjct: 670 YKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAV 729

Query: 309 KVDFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGL 368
           K D  K YD V+W +L   ++   F   W  WI   V +   SVL+NGSP       RG+
Sbjct: 730 KTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGI 789

Query: 369 RQGDPL 374
           RQGDPL
Sbjct: 790 RQGDPL 795


>UniRef100_O22220 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score =  182 bits (461), Expect = 2e-44
 Identities = 106/301 (35%), Positives = 163/301 (53%), Gaps = 5/301 (1%)

Query: 79  QSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFMS 138
           +SR+ W+  GD NSKFF + + + R  N++  ++ E+   + V   +  I   F +   S
Sbjct: 68  KSRDKWMVGGDKNSKFFQATVKANRVSNSLRFLVDENGNEQTVNREKGKIAVTFFEDLFS 127

Query: 139 HNVVRPSVSNLQFQALSVTE--GEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIKE 196
            +      S L+     VTE   + L K  +  E+ +A+   ++  + GPDG    F + 
Sbjct: 128 SSYPSSMDSVLEGFNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDGFTALFFQR 187

Query: 197 FWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKIIA 256
            W ++K+ I+  +  F + G L +  N T + LI K+  P R+ D RPISL   M KII+
Sbjct: 188 QWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPKITKPARMADIRPISLCSVMYKIIS 247

Query: 257 KLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEA---FKLKKDLMLFKVDFE 313
           K+L+ RL+  +  +VS TQSAFV +R + D I++A+E+V       K+ KD M+FK D  
Sbjct: 248 KILSARLKKYLPVIVSPTQSAFVAERLVSDNIILAHEIVHNLRTNEKISKDFMVFKTDMS 307

Query: 314 KTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDP 373
           K YD V+W +L  +L  + F   W  W+  CV + + SVL+NG P       RGLRQGDP
Sbjct: 308 KAYDRVEWPFLKGILLALGFNSTWINWMMACVSSVSYSVLINGQPFGHITPHRGLRQGDP 367

Query: 374 L 374
           L
Sbjct: 368 L 368


>UniRef100_Q9FYK1 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  181 bits (458), Expect = 4e-44
 Identities = 108/305 (35%), Positives = 160/305 (52%), Gaps = 11/305 (3%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFT-HFAQHF 136
           Q+SR  WLR G+ NSK+FH+ +   R+   I  +   +  ++  E  +  +   +F   F
Sbjct: 301 QKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLF 360

Query: 137 MSHNVVRPSVSNLQFQAL----SVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFG 192
            S N   PS     F  L    S    E L+   S  E+KEA+       + GPDG++  
Sbjct: 361 KSSN---PSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSAL 417

Query: 193 FIKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMN 252
           F + +W  + + +   V +F  +G +    N T + LI K  +P  + D RPISL   + 
Sbjct: 418 FFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLY 477

Query: 253 KIIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAF---KLKKDLMLFK 309
           KII+K++A RL+  +  +VS+TQSAFV +R I D IL+A+E+V       ++  + M  K
Sbjct: 478 KIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMAVK 537

Query: 310 VDFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLR 369
            D  K YD V+W YL  +L  + F + W  WI  CV + T SVL+N  P     L+RGLR
Sbjct: 538 SDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLR 597

Query: 370 QGDPL 374
           QGDPL
Sbjct: 598 QGDPL 602


>UniRef100_Q9FXJ5 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  181 bits (458), Expect = 4e-44
 Identities = 108/305 (35%), Positives = 160/305 (52%), Gaps = 11/305 (3%)

Query: 78  QQSRNHWLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFT-HFAQHF 136
           Q+SR  WLR G+ NSK+FH+ +   R+   I  +   +  ++  E  +  +   +F   F
Sbjct: 304 QKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLF 363

Query: 137 MSHNVVRPSVSNLQFQAL----SVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFG 192
            S N   PS     F  L    S    E L+   S  E+KEA+       + GPDG++  
Sbjct: 364 KSSN---PSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSAL 420

Query: 193 FIKEFWIVLKDDIMQFVSEFHRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMN 252
           F + +W  + + +   V +F  +G +    N T + LI K  +P  + D RPISL   + 
Sbjct: 421 FFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLY 480

Query: 253 KIIAKLLANRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAF---KLKKDLMLFK 309
           KII+K++A RL+  +  +VS+TQSAFV +R I D IL+A+E+V       ++  + M  K
Sbjct: 481 KIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMAVK 540

Query: 310 VDFEKTYDSVDWGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLR 369
            D  K YD V+W YL  +L  + F + W  WI  CV + T SVL+N  P     L+RGLR
Sbjct: 541 SDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLR 600

Query: 370 QGDPL 374
           QGDPL
Sbjct: 601 QGDPL 605


>UniRef100_Q60EL0 Hypothetical protein OSJNBa0032D15.6 [Oryza sativa]
          Length = 637

 Score =  180 bits (457), Expect = 5e-44
 Identities = 109/294 (37%), Positives = 157/294 (53%), Gaps = 6/294 (2%)

Query: 84  WLREGDMNSKFFHSLMSSRRRFNTICSVLVEDVRIEGVEPVRNAIFTHFAQHFMSH--NV 141
           WL+EGD+NSKFFH   ++RRR N I S+          +     +F  F +   ++    
Sbjct: 121 WLKEGDVNSKFFHIKANTRRRKNYIHSLQTPSGVAVSAQNKEEELFRFFKERLGTNFQRT 180

Query: 142 VRPSVSNLQFQALSVTEGEGLIKPFSVDEVKEAICDYDSFKSSGPDGVNFGFIKEFWIVL 201
           +  + S LQ  +L + E   L +  + +E+K  I D    K+ GPDG    F K  W  +
Sbjct: 181 LSLNWSLLQLPSLDLNE---LDEDITEEELKSIIFDLPPEKAPGPDGFIGAFFKTAWPTV 237

Query: 202 KDDIMQFVSEF-HRNGKLAKGINTTFIVLISKVDNPQRLNDFRPISLVGSMNKIIAKLLA 260
           KDD++  +  F H N      +N+ FI LI K D+    + FRPISL+ S  KII K+LA
Sbjct: 238 KDDLLAAILSFMHLNTSQLAELNSAFICLIPKKDDATGADHFRPISLMHSFAKIITKILA 297

Query: 261 NRLRLVIGSVVSETQSAFVKKRQILDGILIANEVVDEAFKLKKDLMLFKVDFEKTYDSVD 320
           NRL   +  ++S+ QSAFV+KR I D  L    +V    + KK  +  K+D  K +D+V+
Sbjct: 298 NRLAPRLNEMISQNQSAFVRKRAIHDNFLYVQNMVQMLHRSKKQSLFIKIDIAKAFDTVN 357

Query: 321 WGYLGEVLKCMSFPVLWRKWIRECVGTATASVLVNGSPTDEFPLKRGLRQGDPL 374
           W YL +VL+   F   W  WI   + T+++ VL+NGS        RGLRQGDPL
Sbjct: 358 WPYLLKVLRHFGFGHRWLSWISNLISTSSSQVLLNGSLGMRINHARGLRQGDPL 411


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.333    0.145    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 578,697,696
Number of Sequences: 2790947
Number of extensions: 22777529
Number of successful extensions: 81839
Number of sequences better than 10.0: 791
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 207
Number of HSP's that attempted gapping in prelim test: 80504
Number of HSP's gapped (non-prelim): 912
length of query: 374
length of database: 848,049,833
effective HSP length: 129
effective length of query: 245
effective length of database: 488,017,670
effective search space: 119564329150
effective search space used: 119564329150
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 75 (33.5 bits)


Medicago: description of AC137546.8