BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137510.5 - phase: 0
(1519 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9C692 Polyprotein, putative [Arabidopsis thaliana] 1403 0.0
UniRef100_O22175 Putative retroelement pol polyprotein [Arabidop... 1395 0.0
UniRef100_Q9LVQ2 Retroelement pol polyprotein-like [Arabidopsis ... 1383 0.0
UniRef100_Q9ZPU4 Putative retroelement pol polyprotein [Arabidop... 1379 0.0
UniRef100_Q9FXB7 Putative retroelement polyprotein [Arabidopsis ... 1360 0.0
UniRef100_Q9FIC5 Retroelement pol polyprotein-like [Arabidopsis ... 1313 0.0
UniRef100_Q9SLF0 Putative retroelement pol polyprotein [Arabidop... 1236 0.0
UniRef100_Q9ZVW0 Putative retroelement pol polyprotein [Arabidop... 1033 0.0
UniRef100_Q9C8F4 Ty1/copia-element polyprotein [Arabidopsis thal... 902 0.0
UniRef100_O81617 F8M12.17 protein [Arabidopsis thaliana] 869 0.0
UniRef100_Q9LGZ8 Retroelement pol polyprotein-like [Arabidopsis ... 828 0.0
UniRef100_Q8L700 Hypothetical protein [Arabidopsis thaliana] 789 0.0
UniRef100_Q9FL75 Retroelement pol polyprotein-like [Arabidopsis ... 724 0.0
UniRef100_O65452 LTR retrotransposon like protein [Arabidopsis t... 723 0.0
UniRef100_Q9SJ99 Putative retroelement pol polyprotein [Arabidop... 668 0.0
UniRef100_Q9T0C5 Retrotransposon like protein [Arabidopsis thali... 648 0.0
UniRef100_Q851Y3 Putative polyprotein [Oryza sativa] 625 e-177
UniRef100_Q9ZVE4 Putative retroelement pol polyprotein [Arabidop... 621 e-176
UniRef100_Q6F356 Putative polyprotein [Oryza sativa] 577 e-163
UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum] 554 e-156
>UniRef100_Q9C692 Polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 1403 bits (3631), Expect = 0.0
Identities = 723/1493 (48%), Positives = 990/1493 (65%), Gaps = 71/1493 (4%)
Query: 29 LGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPT--TPEKLEDWK 86
L + DN G VI+ L+ NY+EW+ +T+ ++++K+GF++G IP+P +P+ LEDW
Sbjct: 23 LTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPD-LEDWL 81
Query: 87 AVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQG 146
+ ++L++W+ TI+ L + +S+ D A LW +++RF V NG + ++KA L CKQ
Sbjct: 82 TINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKADLATCKQ- 140
Query: 147 KGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLDGA 206
+G V Y+G+L++IWD + +Y CKC CIC++ + +D +H +L GL+
Sbjct: 141 EGMTVEGYYGKLNKIWDNINSYRPLRICKCGRCICNLGTDQEKYREDDMVHQYLYGLNET 200
Query: 207 -YATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRD-NVMAFKVAPDTRGKSK 264
+ TIRS+L S+ PLP +++ Y V Q+E + S ++ D A ++ P + S+
Sbjct: 201 KFHTIRSSLTSRVPLPGLEEVYNIVRQEEDMVNNRSSNEERTDVTAFAVQMRPRSEVISE 260
Query: 265 LVDNSDKF-----CTHCNREGHDERTCFQIHGFPEWWGDRPRGGRGS-GRGGATTGRDTT 318
NS+K CTHCNR GH CF + G+PEWWGDRPRG S G GR
Sbjct: 261 KFANSEKLQNKKLCTHCNRGGHSPENCFVLIGYPEWWGDRPRGKSNSNGSTSRGRGRFGP 320
Query: 319 GRSGGRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQQILDA 378
G +GG+ R TY + +S + S+ +SG+T QW+ ++
Sbjct: 321 GFNGGQPRPTYVNVVMTGPFPSSEHV--------NRVITDSDRDAVSGLTDEQWRGVVKL 372
Query: 379 LNISKTKDRLHGKND--------ISWIIDTGASHHVTGNFSCLINGKRITNTPVGLPNGK 430
LN ++ ++ + SWI+DTGASHH+TGN L + + ++ + L +G
Sbjct: 373 LNAGRSDNKSNAHETQSGTCSLFTSWILDTGASHHMTGNLELLSDMRSMSPVLIILADGN 432
Query: 431 DATAIQEGSVILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTR 490
A+ EG+V L L L +V +V +L +LISV Q++D+++C+ DRTTR
Sbjct: 433 KRVAVSEGTVRLGSHLILKSVFYVKELESDLISVGQMMDENHCV-----------DRTTR 481
Query: 491 TLIGAGERIDGLYFFRGVPKVHALMVEGDSAMDLWHKRLGHPSEKVLKFIPH-VSQHSRS 549
+ G+R +G + FRG+ A+ + DLWH+RLGH S+K++ +P + +
Sbjct: 482 MVTRIGKRENGSFCFRGMENAAAVHTSVKAPFDLWHRRLGHASDKIVNLLPRELLSSGKE 541
Query: 550 KNNRPCDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLTIVNDYS 609
CD C RAKQ RD+FPLS+N + F+L+HCD+WG YR S GA+Y+LTIV+DYS
Sbjct: 542 ILENVCDTCMRAKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRAPSYSGARYFLTIVDDYS 601
Query: 610 RAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNNGIVFET 669
R VWVYL+ +K+E + +F+A V+RQFD +IK VRSDNGTEF C+R+YF + GI ET
Sbjct: 602 RGVWVYLMTDKSETQKHLKDFIALVERQFDTEIKIVRSDNGTEFLCMREYFLHKGIAHET 661
Query: 670 SCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSSVLNYKT 729
SCVGTP QNGRVERKH+HI+N+ARALRFQ +LP+QFWGEC+L+A YLINRTPS +L K+
Sbjct: 662 SCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKS 721
Query: 730 PYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLES 789
PYE L+ PK+ ++++FG LCYAHNQ GDKFA+RSR+C+FVGYP+G+KGW+L+DLE
Sbjct: 722 PYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEE 781
Query: 790 KEYIVSRDVKFYEHEFPFDV----QLDTTHSTPFIDSEYVTEDIGFETYDASFEGGGASM 845
+++ VSRDV F E EFP+ + D + ++ E IG T G
Sbjct: 782 QKFFVSRDVIFQETEFPYSKMSCNEEDERVLVDCVGPPFIEEAIGPRTIIGRNIG---EA 838
Query: 846 ALQDNEQTQLQGGLHGDCNGADVAANEGLSVSGIEGEVEPAHEVDGADVVVMQEDDVEPG 905
+ N T G + + N + +E +S+S ++ + V+
Sbjct: 839 TVGPNVAT---GPIIPEINQESSSPSEFVSLSSLDP--------------FLASSTVQTA 881
Query: 906 EPEVVAEREAIVASEMGRGMRNKVPNIKLKDFVTHTIRKVKSSKSSSAQEDASGTPYPIT 965
+ + + A + ++ R R +KLK+FVT+T+ S S + E +S + YPI
Sbjct: 882 DLPLSSTTPAPI--QLRRSSRQTQKPMKLKNFVTNTV-----SVESISPEASSSSLYPIE 934
Query: 966 YFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNETWVMEKLP 1025
+V C RF+ H+ F+AAVTAG EP + EA+ D WR+AM EI++L N+T+ + LP
Sbjct: 935 KYVDCHRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLP 994
Query: 1026 PGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRTFLA 1085
PGK+ALG+KWVYKIK+ SDG+IER KARLVV G+ Q EG+DYDETFAPVAKM TVR FL
Sbjct: 995 PGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLG 1054
Query: 1086 VAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYGLKQAPRCW 1145
VAA + W VHQMDVHNAFLHGDL+EEVYMK+P GF+ DP+ VCRL KSLYGLKQAPRCW
Sbjct: 1055 VAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCW 1114
Query: 1146 FAKLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLGV 1205
F+KL +ALK+YGF QS SDYSLF+ + I ++VLVYVDDLII+G+ A+ FK+YL
Sbjct: 1115 FSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLES 1174
Query: 1206 CFHMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAKPADFPMEQHHKLAL 1265
CFHMKDLG+LKYFLG+EV+RN +G YL QRKY L+II E GLLGA+P+ FP+EQ+HKL+L
Sbjct: 1175 CFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSL 1234
Query: 1266 VSGKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAALRVVRYLKK 1325
+ L D YRRL+GRLIYL VTRP+L+YSVH L+QFMQ P ++HW AA+RVVRYLK
Sbjct: 1235 STSPLLSDSSRYRRLVGRLIYLVVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKS 1294
Query: 1326 HPGQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSS 1385
+PGQGILL S S L++ GWCDSD+A+CPLTRRSLTG+ V L +P+SWKTKKQPTVSRSS
Sbjct: 1295 NPGQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSS 1354
Query: 1386 AEAEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFHERTKHIEA 1445
AEAEYR+MA T EL WLK++L DLGVSH Q M+++ DSKSA+ ++ NPV HERTKH+E
Sbjct: 1355 AEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEV 1414
Query: 1446 DCHFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLGIRDLHAP 1498
DCHF+RDA++ GII +VP+ QLADI TKALG+ + + LRKLGI D+HAP
Sbjct: 1415 DCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGILDVHAP 1467
>UniRef100_O22175 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 1395 bits (3611), Expect = 0.0
Identities = 731/1517 (48%), Positives = 988/1517 (64%), Gaps = 72/1517 (4%)
Query: 15 NSSNSEKKVDLVFFLGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIP 74
++S+S + + ++DNPG +I+ + L+ NY EWS ++ +AK+K GF++G IP
Sbjct: 10 STSSSNTSSTTAYLINASDNPGALISSVVLKENNYAEWSEELQNFLRAKQKLGFIDGSIP 69
Query: 75 KPTTPEKLEDWKAVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARIC 134
KP +L W A+ SM++ W+ +I+P++RST+ + +A LW +L++RF V NG R
Sbjct: 70 KPAADPELSLWIAINSMIVGWIRTSIDPTIRSTVGFVSEASQLWENLRRRFSVGNGVRKT 129
Query: 135 QLKASLGECKQGKGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAED 194
LK + C Q G+ V AY+GRL ++W+EL Y CKCE DI K+ D D
Sbjct: 130 LLKDEIAACTQD-GQPVLAYYGRLIKLWEELQNYKSGRECKCEAA-SDIEKERED----D 183
Query: 195 YLHHFLMGLDGAYATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAFK 254
+H FL+GLD +++IRS++ +PLP++ Q Y RV+++E+ + + + F
Sbjct: 184 RVHKFLLGLDSRFSSIRSSITDIEPLPDLYQVYSRVVREEQNLNASRTKDVVKTEAIGFS 243
Query: 255 VAPDTRGKSKLVDNSDKFCTHCNREGHDERTCFQIHGFPEWWGDR-PRGGRGSGRGGATT 313
V T + + D S FCTHCNR+GH+ CF +HG+P+WW ++ P+ + S RG +
Sbjct: 244 VQSSTTPRFR--DKSTLFCTHCNRKGHEVTQCFLVHGYPDWWLEQNPQENQPSTRGRGSN 301
Query: 314 GRDTTGRSGGRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQ 373
GR G S GRG R++ TT R N+ Q+ AP S + G I AQ
Sbjct: 302 GR---GSSSGRGGN------RSSAPTTRGRG-RANNAQAAAPTVSGD--GNDQI--AQLI 347
Query: 374 QILDALNISKTKDRLHGKNDIS-WIIDTGASHHVTGNFSCLINGKRITNTPVGLPNGKDA 432
+L A S + +RL G ++ +IDTGASHH+TG+ S L++ IT +PV P+GK +
Sbjct: 348 SLLQAQRPSSSSERLSGNTCLTDGVIDTGASHHMTGDCSILVDVFDITPSPVTKPDGKAS 407
Query: 433 TAIQEGSVILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTRTL 492
A + G+++L +L++VLFVP C LISV++L+ ++ I FT+ C +QDR RTL
Sbjct: 408 QATKCGTLLLHDSYKLHDVLFVPDFDCTLISVSKLLKQTSSIAIFTDTFCFLQDRFLRTL 467
Query: 493 IGAGERIDGLYFFRGV--PKVHALMVEGDSAMDLWHKRLGHPSEKVLKFIPHVSQHSRSK 550
IGAGE +G+Y+F GV P+VH + + DLWH+RLGHPS VL +P ++ S+
Sbjct: 468 IGAGEEREGVYYFTGVLAPRVHKASSDFAISGDLWHRRLGHPSTSVLLSLPECNRSSQGF 527
Query: 551 NN-RPCDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLTIVNDYS 609
+ CD C R+KQ R+ FP+S N F L+H D+WG YRT S+ GA Y+LT+V+DYS
Sbjct: 528 DKIDSCDTCFRSKQTREVFPISNNKTMECFSLIHGDVWGPYRTPSTTGAVYFLTLVDDYS 587
Query: 610 RAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNNGIVFET 669
R+VW YL+ +KTE+ + NF A +RQF K++K R+DNGTEF CL YF +GI+ +T
Sbjct: 588 RSVWTYLMSSKTEVSQLIKNFCAMSERQFGKQVKAFRTDNGTEFMCLTPYFQTHGILHQT 647
Query: 670 SCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSSVLNYKT 729
SCV TPQQNGRVERKH+HI+NVARA FQG+LP++FWGE +LTA +LINRTPS+VL KT
Sbjct: 648 SCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKT 707
Query: 730 PYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLES 789
PYE LFG+ P +D ++ FGCLCYAH + R+ DKF SRSRKC+F+GYP+GKK W++YDLE+
Sbjct: 708 PYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLET 767
Query: 790 KEYIVSRDVKFYEHEFPFDVQLDTTHSTPFIDSEYVTED----IGFETYDASFEGGGASM 845
+ SRDV+F+E +P+ + P V +D I + + + +S
Sbjct: 768 GKIFASRDVRFHEDIYPYATATQSNVPLPPPTPPMVNDDWFLPISTQVDSTNVDSSSSSS 827
Query: 846 ALQDNEQTQLQGGLHGDCNGADVAANEGLSVSGIEGEVEPAHEVDGADVVVMQEDDVE-- 903
Q Q + + + E + I P+ +D + + D E
Sbjct: 828 PAQSGSIDQPPRSIDQSPSTSTNPVPE--EIGSIVPSSSPSRSIDRSTSDLSASDTTELL 885
Query: 904 ----------PGEPEVVAEREAIVASEMGRGMRNKVPNIKLKDFVTHTIRKVKSSK---- 949
PG PE+ +G+G R K ++ LKDFVT+T K K++
Sbjct: 886 STGESSTPSSPGLPEL-----------LGKGCREKKKSVLLKDFVTNTTSKKKTASHNIH 934
Query: 950 ------------SSSAQEDASGTPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAV 997
S SA + T YP++ F++ +S H F+AA+ EP +FK+A+
Sbjct: 935 SPSQVLPSGLPTSLSADSVSGKTLYPLSDFLTNSGYSANHIAFMAAILDSNEPKHFKDAI 994
Query: 998 KDSGWRDAMRNEIQALEDNETWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVF 1057
W +AM EI ALE N TW + LP GKKA+ SKWVYK+K++SDG++ER KARLVV
Sbjct: 995 LIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVM 1054
Query: 1058 GHHQIEGIDYDETFAPVAKMVTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVP 1117
G+HQ EG+D+ ETFAPVAK+ TVRT LAVAA K WEVHQMDVHNAFLHGDLEEEVYM++P
Sbjct: 1055 GNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLP 1114
Query: 1118 PGFKNTDPNLVCRLKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQI 1177
PGFK +DP+ VCRL+KSLYGLKQAPRCWF+KL TAL+ GF QSY DYSLF+L G+ I
Sbjct: 1115 PGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTII 1174
Query: 1178 NVLVYVDDLIIAGNDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRKY 1237
+VLVYVDDLI+AGN++ A+ FK+ L CFHMKDLG LKYFLGLEV+R +G L QRKY
Sbjct: 1175 HVLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKY 1234
Query: 1238 ALEIIDETGLLGAKPADFPMEQHHKLALVSGKPLEDPEPYRRLIGRLIYLSVTRPDLAYS 1297
AL+I+ ETGLLG KP+ P+ +HKLA ++G +PE YRRL+GR IYL++TRPDL+Y+
Sbjct: 1235 ALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYA 1294
Query: 1298 VHILSQFMQKPCEEHWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCDSDWASCPLTRR 1357
VHILSQFMQ P HWEAALR+VRYLK P QGI LRSDS L + +CDSD+ +CPLTRR
Sbjct: 1295 VHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRR 1354
Query: 1358 SLTGWVVLLDLSPVSWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVSHSQG 1417
SL+ +VV L SP+SWKTKKQ TVS SSAEAEYR+MA T ELKWLK LL DLGV HS
Sbjct: 1355 SLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSP 1414
Query: 1418 MQLYCDSKSALHIAQNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLADIFTKA 1477
M+L+CDS++A+HIA NPVFHERTKHIE+DCH VRDAV+ +I ++ T Q+AD+ TK+
Sbjct: 1415 MKLHCDSEAAIHIAANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKS 1474
Query: 1478 LGKAQFEFLLRKLGIRD 1494
L + FE LL LG+ D
Sbjct: 1475 LPRPTFERLLSTLGVTD 1491
>UniRef100_Q9LVQ2 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 1383 bits (3579), Expect = 0.0
Identities = 733/1501 (48%), Positives = 975/1501 (64%), Gaps = 66/1501 (4%)
Query: 27 FFLGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPTTPEK-LEDW 85
+ L S+DNPG +I+ + L G NY+EWS + + QAKRK GF+ G I KP E+W
Sbjct: 27 YTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYENW 86
Query: 86 KAVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQ 145
+AV SM++ W+ +IEP ++ST+++ DA LW+ LKQRF V N R+ Q+KA L C+Q
Sbjct: 87 QAVNSMIVGWIRASIEPKVKSTVTFISDAHQLWSELKQRFSVGNKVRVHQIKAQLAACRQ 146
Query: 146 GKGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLDG 205
G+ V Y+GRL ++W+E Y CKC C C + + E+ +H F++GLD
Sbjct: 147 D-GQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDD 205
Query: 206 A-YATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAF-----KVAPDT 259
+ + + + L++ DP P++ + Y RV+++E+ R I++ + + + F +V D
Sbjct: 206 SRFGGLSATLIAMDPFPSLGEIYSRVVREEQ-RLASVQIREQQQSAIGFLTRQSEVTADG 264
Query: 260 RGKSKLVDNSDK--FCTHCNREGHDERTCFQIHGFPEWWGDRPRGG-RGS---GRGGATT 313
R S ++ + D+ C+HC R GH+++ C+QI GFP+WW +R GG RGS GRGG ++
Sbjct: 265 RTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRGGRSS 324
Query: 314 GRDTTGRSGGRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQ 373
G + +GR GRG+ T A ATTS+ S TP Q +
Sbjct: 325 GSNNSGR--GRGQVT------AAHATTSNLS------------------SFPEFTPDQLR 358
Query: 374 QILDALNISK--TKDRLHGKNDISWII-DTGASHHVTGNFSCLINGKRITNTPVGLPNGK 430
I + T D+L GK + +I DTGASHH+TG S L N I + VG + +
Sbjct: 359 VITQMIQNKNNGTSDKLSGKMKLGDVILDTGASHHMTGQLSLLTNIVTIPSCSVGFADDR 418
Query: 431 DATAIQEGSVILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTR 490
AI G+ L + L+NVL+VP L C+LISV++L+ C+ FT+ +CV+QDR +R
Sbjct: 419 KTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSR 478
Query: 491 TLIGAGERIDGLYFFR--GVPKVHALMVEGDSAMDLWHKRLGHPSEKVLKFIPHVSQHSR 548
TLIG GE DG+Y+ VH + V D A LWH+RLGHPS VL +P S S
Sbjct: 479 TLIGTGEERDGVYYLTDAATTTVHKVDVTTDHA--LWHQRLGHPSFSVLSSLPLFSGSSC 536
Query: 549 SKNNRPCDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLTIVNDY 608
S ++R CDVC RAKQ R+ FP S N + F L+HCD+WG YR SSCGA Y+LTIV+D+
Sbjct: 537 SVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDF 596
Query: 609 SRAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNNGIVFE 668
SR+VW YLL K+E+ ++ NF+A+ ++QF K +K +RSDNGTEF CL YF GIV +
Sbjct: 597 SRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQ 656
Query: 669 TSCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSSVLNYK 728
TSCVGTPQQNGRVERKH+HI+NV+RAL FQ LP++FWGE V+TA YLINRTPSS+ N
Sbjct: 657 TSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGL 716
Query: 729 TPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLE 788
+PYE L G P +D +++FG CYAH RD DKF RSR CIFVGYP+G+KGWK+YDL
Sbjct: 717 SPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLS 776
Query: 789 SKEYIVSRDVKFYEHEFPFDVQLDTTHSTPFIDSEYVTEDIGFETYDASFEGGGASMALQ 848
+ E+IVSRDV F E+ FP+ T TP + +T D + + + G +L
Sbjct: 777 TNEFIVSRDVVFRENVFPYATNEGDTIYTPPVTCP-ITYDEDWLPFTTLEDRGSDENSLS 835
Query: 849 DNEQTQLQGGLHGDCNGADVAANEGLSV-SGIEGEVEPAHEVDGADVVVMQEDDVEPG-- 905
D D + +D + S+ + ++ + P+ V P
Sbjct: 836 DPPVCVT------DVSESDTEHDTPQSLPTPVDDPLSPSTSVTPTQTPTNSSSSTSPSTN 889
Query: 906 -EPEVVAEREAIVASEMGRGMRNKVPNIKLKDFVTH-------TIRKVKSSKSSSAQEDA 957
P I + +G R +LKD++ + T + S S S+
Sbjct: 890 VSPPQQDTTPIIENTPPRQGKRQVQQLARLKDYILYNASCTPNTPHVLSPSTSQSSSSIQ 949
Query: 958 SGTPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNE 1017
+ YP+T ++ E FS H+ F+AA+TA EP +FKEAVK W DAM E+ ALE N+
Sbjct: 950 GNSQYPLTDYIFDECFSAGHKVFLAAITANDEPKHFKEAVKVKVWNDAMYKEVDALEVNK 1009
Query: 1018 TWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKM 1077
TW + LP GK A+GS+WVYK K ++DG++ER KARLVV G++QIEG DY ETFAPV KM
Sbjct: 1010 TWDIVDLPTGKVAIGSQWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKM 1069
Query: 1078 VTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYG 1137
TVRT L + A +WEV+QMDVHNAFLHGDLEEEVYMK+PPGF+++ P+ VCRL+KSLYG
Sbjct: 1070 TTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYG 1129
Query: 1138 LKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALK 1197
LKQAPRCWF KL ALKR+GF+Q Y DYS F+ I++ VLVYVDDLII GND ++
Sbjct: 1130 LKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLIICGNDEYMVQ 1189
Query: 1198 IFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAKPADFPM 1257
FK YLG CF MKDLG LKYFLG+EV+R +GI+L QRKYAL+II ++G LGA+PA P+
Sbjct: 1190 KFKEYLGRCFSMKDLGKLKYFLGIEVSRGPDGIFLSQRKYALDIISDSGTLGARPAYTPL 1249
Query: 1258 EQHHKLALVSGKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAAL 1317
EQ+H LA G L+DP+P+RRL+GRL+YL TRP+L+YSVH+LSQFMQ P E H EAA+
Sbjct: 1250 EQNHHLASDDGPLLQDPKPFRRLVGRLLYLLHTRPELSYSVHVLSQFMQAPREAHLEAAM 1309
Query: 1318 RVVRYLKKHPGQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKK 1377
R+VRYLK PGQGILL S+ +L LE +CDSD+ SCPLTRRSL+ +VVLL SP+SWKTKK
Sbjct: 1310 RIVRYLKGSPGQGILLSSNKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLGGSPISWKTKK 1369
Query: 1378 QPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFH 1437
Q TVS SSAEAEYR+M++ E+KWL +LL +LG++ + +L+CDSK+A+ IA NPVFH
Sbjct: 1370 QDTVSHSSAEAEYRAMSVALKEIKWLNKLLKELGITLAAPTRLFCDSKAAISIAANPVFH 1429
Query: 1438 ERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLGIRDLHA 1497
ERTKHIE DCH VRDAV GII +V TS QLADIFTKALG+ QF +L+ KLGI++LH
Sbjct: 1430 ERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQNLHT 1489
Query: 1498 P 1498
P
Sbjct: 1490 P 1490
>UniRef100_Q9ZPU4 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 1379 bits (3568), Expect = 0.0
Identities = 735/1532 (47%), Positives = 972/1532 (62%), Gaps = 79/1532 (5%)
Query: 5 SGDGGKKVDDNSSNSEKKVDLVFFLGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKR 64
SG K S + + + L S+DNPG VI+ ++L G NY++W+ + + QAKR
Sbjct: 10 SGSTTKMGASGGSRVDSLMVSPYTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKR 69
Query: 65 KYGFVEGKIPKPTTPE-KLEDWKAVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQ 123
K GF+ G IP+P + E+W AV SM++ W+ +IEP +++T+++ DA LW LKQ
Sbjct: 70 KTGFINGTIPRPPPNDPNYENWTAVNSMIVGWIRTSIEPKVKATVTFISDAHLLWKDLKQ 129
Query: 124 RFCVVNGARICQLKASLGECKQGKGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDI 183
RF V N RI Q++A L C+Q G+ V Y+GRLS +W+E Y C C C C
Sbjct: 130 RFSVGNKVRIHQIRAQLSSCRQD-GQAVIEYYGRLSNLWEEYNIYKPVTVCTCGLCRCGA 188
Query: 184 NKQVTDFSAEDYLHHFLMGLDGA-YATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYS 242
+ T E+ +H F++GLD + + + + L++ DPLP++ + Y RVI++E+ R
Sbjct: 189 TSEPTKEREEEKIHQFVLGLDESRFGGLCATLINMDPLPSLGEIYSRVIREEQ-RLASVH 247
Query: 243 IQQNRDNVMAFKVAPDTRGKSKLVDNSDK------------------FCTHCNREGHDER 284
+++ ++ + F + VD S C++C R GH+++
Sbjct: 248 VREQKEEAVGFLARREQLDHHSRVDASSSRSEHTGGSRSNSIIKGRVTCSNCGRTGHEKK 307
Query: 285 TCFQIHGFPEWWGDRP--RGGRGSGRGGATTGRDTTGRSGGRGRGTYNALARANKATTSS 342
C+QI GFP+WW +R RG G GRGG G +GGRG+G A AT+S+
Sbjct: 308 ECWQIVGFPDWWSERNGGRGSNGRGRGGR-------GSNGGRGQGQ----VMAAHATSSN 356
Query: 343 RSIGGNSGQSHAPPHSS--EAAGISGITPAQWQQILDALNISKTKDRLHGKNDISWII-D 399
S+ + H S + SG T + DRL GK + II D
Sbjct: 357 SSVFPEFTEEHMRVLSQLVKEKSNSGSTS------------NNNSDRLSGKTKLGDIILD 404
Query: 400 TGASHHVTGNFSCLINGKRITNTPVGLPNGKDATAIQEGSVILDGGLRLNNVLFVPQLTC 459
+GASHH+TG S L N + PVG +G A A+ G + L + L NVLFVP L C
Sbjct: 405 SGASHHMTGTLSSLTNVVPVPPCPVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPSLNC 464
Query: 460 NLISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGERIDGLYFFRGVP--KVHALMVE 517
LISV++L+ + C+ FT+ LC +QDR+++TLIG+GE G+Y+ V K+H V+
Sbjct: 465 TLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGEERGGVYYLTDVTPAKIHTANVD 524
Query: 518 GDSAMDLWHKRLGHPSEKVLKFIPHVSQHSRSKNNRPCDVCPRAKQHRDSFPLSENNAAS 577
D A LWH+RLGHPS VL +P S+ S + + CDVC RAKQ R+ FP S N
Sbjct: 525 SDQA--LWHQRLGHPSFSVLSSLPLFSKTSSTVTSHSCDVCFRAKQTREVFPESINKTEE 582
Query: 578 LFELVHCDLWGSYRTRSSCGAQYYLTIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQ 637
F L+HCD+WG YR +SCGA Y+LTIV+DYSRAVW YLL K+E+ + NF+ + ++Q
Sbjct: 583 CFSLIHCDVWGPYRVPASCGAVYFLTIVDDYSRAVWTYLLLEKSEVRQVLTNFLKYAEKQ 642
Query: 638 FDKKIKKVRSDNGTEFNCLRDYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARALRF 697
F K +K VRSDNGTEF CL YF NGI+ +TSCVGTPQQNGRVERKH+HI+NVARAL F
Sbjct: 643 FGKTVKMVRSDNGTEFMCLSSYFRENGIIHQTSCVGTPQQNGRVERKHRHILNVARALLF 702
Query: 698 QGHLPMQFWGECVLTACYLINRTPSSVLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQR 757
Q LP++FWGE +LTA YLINRTPSS+L+ +TPYE L G P + +++FG CY H
Sbjct: 703 QASLPIKFWGESILTAAYLINRTPSSILSGRTPYEVLHGSKPVYSQLRVFGSACYVHRVT 762
Query: 758 RDGDKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYEHEFPF-DVQLDTTHS 816
RD DKF RSR CIFVGYP+GKKGWK+YD+E E++VSRDV F E FP+ V T S
Sbjct: 763 RDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSRDVIFREEVFPYAGVNSSTLAS 822
Query: 817 TPFIDSEYVTEDIGFETYDASFEGGGASMALQDNEQTQLQGGLHGDCNGADVAANEGLSV 876
T V+ED + G S+ + E+ C +V + +S
Sbjct: 823 TSL---PTVSEDDDWAIPPLEVRGSIDSV---ETERVV--------CTTDEVVLDTSVSD 868
Query: 877 SGIEG-EVEPAHEVDGADVVVMQEDDVE-PGEPEVVAEREAIVAS--EMGRGMRNKVPNI 932
S I E P + + V P P VV I S + + R P
Sbjct: 869 SEIPNQEFVPDDTPPSSPLSVSPSGSPNTPTTPIVVPVASPIPVSPPKQRKSKRATHPPP 928
Query: 933 KLKDFVTHTIRKVKSSKSSSAQEDASGTP------YPITYFVSCERFSIRHRNFVAAVTA 986
KL D+V + SS + + + + +P+T +VS FS HR ++AA+T
Sbjct: 929 KLNDYVLYNAMYTPSSIHALPADPSQSSTVPGKSLFPLTDYVSDAAFSSSHRAYLAAITD 988
Query: 987 GKEPNNFKEAVKDSGWRDAMRNEIQALEDNETWVMEKLPPGKKALGSKWVYKIKHHSDGS 1046
EP +FKEAV+ W DAM E+ ALE N+TW + LPPGK A+GS+WV+K K++SDG+
Sbjct: 989 NVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVFKTKYNSDGT 1048
Query: 1047 IERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVAAIKKWEVHQMDVHNAFLHG 1106
+ER KARLVV G+ Q+EG DY ETFAPV +M TVRT L A +WEV+QMDVHNAFLHG
Sbjct: 1049 VERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDVHNAFLHG 1108
Query: 1107 DLEEEVYMKVPPGFKNTDPNLVCRLKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYS 1166
DLEEEVYMK+PPGF+++ P+ VCRL+KSLYGLKQAPRCWF KL +L R+GFVQSY DYS
Sbjct: 1109 DLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYS 1168
Query: 1167 LFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARN 1226
LF+ R I++ VL+YVDDL+I GND L+ FK YL CF MKDLG LKYFLG+EV+R
Sbjct: 1169 LFSYTRNNIELRVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFLGIEVSRG 1228
Query: 1227 HEGIYLCQRKYALEIIDETGLLGAKPADFPMEQHHKLALVSGKPLEDPEPYRRLIGRLIY 1286
EGI+L QRKYAL++I ++G LG++PA P+EQ+H LA G L DP+PYRRL+GRL+Y
Sbjct: 1229 PEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLY 1288
Query: 1287 LSVTRPDLAYSVHILSQFMQKPCEEHWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCD 1346
L TRP+L+YSVH+L+QFMQ P E H++AALRVVRYLK PGQGILL +D +L LE +CD
Sbjct: 1289 LLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCD 1348
Query: 1347 SDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQL 1406
SDW SCPLTRRS++ +VVLL SP+SWKTKKQ TVS SSAEAEYR+M+ E+KWL++L
Sbjct: 1349 SDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWLRKL 1408
Query: 1407 LGDLGVSHSQGMQLYCDSKSALHIAQNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPT 1466
L +LG+ S +LYCDSK+A+HIA NPVFHERTKHIE+DCH VRDAV GII +V T
Sbjct: 1409 LKELGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSVRDAVRDGIITTQHVRT 1468
Query: 1467 SVQLADIFTKALGKAQFEFLLRKLGIRDLHAP 1498
+ QLAD+FTKALG+ QF +L+ KLG+++LH P
Sbjct: 1469 TEQLADVFTKALGRNQFLYLMSKLGVQNLHTP 1500
>UniRef100_Q9FXB7 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 1360 bits (3520), Expect = 0.0
Identities = 709/1496 (47%), Positives = 960/1496 (63%), Gaps = 63/1496 (4%)
Query: 29 LGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPT-TPEKLEDWKA 87
L S DNPG +I+ LRG NYDEW+ +R + +A++K+GF +G IP+P T EDW A
Sbjct: 27 LTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGSIPQPVETDPDFEDWTA 86
Query: 88 VQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQGK 147
+++++W+ TI+ ++ +++S+ DD+ LWTH+++RF V NG R+ +LK L C+Q K
Sbjct: 87 NNALVVSWMKLTIDETVSTSMSHLDDSHELWTHIQKRFGVKNGQRVQRLKTELATCRQ-K 145
Query: 148 GEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLD-GA 206
G + Y+GRLS++W L Y + T D+ K+ ED LH FLMGLD
Sbjct: 146 GVAIETYYGRLSQLWRSLADYQQAKTMD------DVRKE----REEDKLHQFLMGLDESV 195
Query: 207 YATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAFKVAPDTRGKSKLV 266
Y ++S LLS+ PLP++++AY + QDE + + D V +F V +R +
Sbjct: 196 YGAVKSALLSRVPLPSLEEAYNALTQDEESKSLSRLHNERVDGV-SFAVQTTSRPRDS-- 252
Query: 267 DNSDKFCTHCNREGHDERTCFQIHGFPEWWGDRPR--GGRGSGRGGATT--GRDTTGRSG 322
+ ++ C++C R GH CF++ G+P W ++ R S RGG ++ G+ + GR
Sbjct: 253 -SENRVCSNCGRVGHLAEQCFKLIGYPPWLEEKLRLKNTASSSRGGLSSFKGKQSHGRGS 311
Query: 323 GRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQQILDALNIS 382
+ +A AN T SS + +P S + G+SG+ +QW+ + L
Sbjct: 312 SINHVASSGMA-ANVVTNSSLT---------SPLTSDDRIGLSGLNDSQWKILQTILEER 361
Query: 383 KTKDRLH--GKNDI-SWIIDTGASHHVTGNFSCLINGKRITNTPVGLPNGKDATAIQEGS 439
K+ H GK + SWIID+GA++H+TG+ + L N + + LP+G+ TA ++GS
Sbjct: 362 KSTSNDHQSGKYFLESWIIDSGATNHMTGSLAFLRNVCDMPPVLIKLPDGRFTTATKQGS 421
Query: 440 VILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGERI 499
V L L L +VLFV L C+LISV+QL CI Q T+ +C++QDRTT LIGAG +
Sbjct: 422 VQLGSSLDLQDVLFVDGLHCHLISVSQLTRTRRCIFQITDKVCIVQDRTTLMLIGAGREL 481
Query: 500 DGLYFFRGVPKVHALMVEGDSAMDLWHKRLGHPSEKVLKFIPHVSQHSRSKNNRPCDVCP 559
+GLYFFRGV A+ + + LWH+RLGHPS K L +P S + +++ C++C
Sbjct: 482 NGLYFFRGVETAAAVTSKALPSSQLWHQRLGHPSSKALHLLPFSDVTSSTFDSKTCEICI 541
Query: 560 RAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLTIVNDYSRAVWVYLLCN 619
+AKQ RD FPLS N + FELVHCDLWG YRT S CG++Y+LT+V+DYSRAVW+YLL +
Sbjct: 542 QAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFLTLVDDYSRAVWLYLLPS 601
Query: 620 KTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNNGIVFETSCVGTPQQNG 679
K E NF+A V+RQ+ IK +RSDNG+EF CL D+F GI+ ETSCVGTPQQNG
Sbjct: 602 KQEAPKHLKNFIALVERQYTTNIKMIRSDNGSEFICLSDFFAQKGIIHETSCVGTPQQNG 661
Query: 680 RVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSSVLNYKTPYEKLFGKVP 739
RVERKH+HI+NVARALRFQ LP++FW C LTA YLINRTP+ +L KTP+E ++ + P
Sbjct: 662 RVERKHRHILNVARALRFQSGLPIEFWSYCALTAAYLINRTPTPLLKGKTPFELIYNRPP 721
Query: 740 KFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVK 799
+++IFGC+CY HN + GDKFASRS K IF+GYP+ KKGW++Y++E+ VSRDV
Sbjct: 722 PLQHIRIFGCICYVHNLKHGGDKFASRSNKSIFLGYPFAKKGWRVYNIETGVVSVSRDVV 781
Query: 800 FYEHEFPFDVQLDTTHSTPFIDSEYVT----EDIGFETYDASFEGGGASMALQDNEQTQL 855
F E EF F + + S+P +D V E+I S + +
Sbjct: 782 FRETEFHFPISV--MDSSPSLDPVLVDSSELEEISMTPPVTPSSPATPSSPVTPSSPVTP 839
Query: 856 QGGLHGDCNGADVA-------ANEGLSVSGIEGEVEPAHEVDGADVVVMQEDDVEPGEPE 908
+ + ++ IE + D ED+ P E
Sbjct: 840 SSPVSPSSPVTPSSPVTPVSSTTTSAAIDTIEDITTDLEDSTSMDFFPDDEDEFSPTATE 899
Query: 909 VVAERE------AIVASEMGRGMRNKVPNIKLKDFVTHTIRKVKSSKSSSAQEDASGTPY 962
A A+ +G+G R K P +KL D+VT + Q S TPY
Sbjct: 900 SPASSSSPVHPPAVQLELLGKGHRPKRPPVKLADYVTTLLH----------QPFPSATPY 949
Query: 963 PITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNETWVME 1022
P+ ++S RFS ++ ++ A+T+G EP N+ EA+ D W+ A+ +EI +LE+ TW +E
Sbjct: 950 PLDNYISSSRFSDNYQAYILAITSGNEPRNYNEAMLDDHWKGAVSHEIGSLENLGTWTVE 1009
Query: 1023 KLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRT 1082
LPPGKKALG KWV+++K+ SDG++ER KARLVV G++Q EG+DY ETFAPVAKMVTVR
Sbjct: 1010 DLPPGKKALGCKWVFRLKYKSDGTLERHKARLVVLGNNQTEGLDYTETFAPVAKMVTVRA 1069
Query: 1083 FLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYGLKQAP 1142
FL WEVHQMDVHNAFLHGDL+EEVYM+ PPGF+ D VCRL+KSLYGLKQAP
Sbjct: 1070 FLQQVVSLDWEVHQMDVHNAFLHGDLDEEVYMQFPPGFRTGDKTKVCRLRKSLYGLKQAP 1129
Query: 1143 RCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAY 1202
RCWFAKL +ALK YGF+Q SDYSLF H+ ++++VLVYVDDLII G IA + FK Y
Sbjct: 1130 RCWFAKLTSALKNYGFIQDISDYSLFIFHKNGVRLHVLVYVDDLIITGTTIAVITEFKHY 1189
Query: 1203 LGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAKPADFPMEQHHK 1262
L CF+MKDLG+L+YFLG+EVAR+ EGIYLCQRKYAL+II ETGLLG KPA FP++Q+HK
Sbjct: 1190 LSSCFYMKDLGILRYFLGIEVARSPEGIYLCQRKYALDIITETGLLGVKPASFPLDQNHK 1249
Query: 1263 LALVSGKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAALRVVRY 1322
LA +G+ ++DP YRRL+GR+IYL+ TRP+L+Y +HILSQFM P HWEAALRVVRY
Sbjct: 1250 LAFATGETIDDPLRYRRLVGRIIYLATTRPELSYVIHILSQFMHNPKPAHWEAALRVVRY 1309
Query: 1323 LKKHPGQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQPTVS 1382
LK PGQGILLR+++ L L WCDSD+ +CP + RSLTGW + L SP+SWKT+KQ VS
Sbjct: 1310 LKSSPGQGILLRANTPLVLSAWCDSDFGACPHSDRSLTGWFIQLGGSPLSWKTQKQNVVS 1369
Query: 1383 RSSAEAEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFHERTKH 1442
RSSAEAEYR+MA T E+ W+++LL LG+ + L+ DS SA+ +A NPV+H RTKH
Sbjct: 1370 RSSAEAEYRAMAETVSEIIWIRELLPALGIPCTAPTTLHSDSLSAISLAANPVYHARTKH 1429
Query: 1443 IEADCHFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLGIRDLHAP 1498
+ D HF+RD +V G I +V T+ QLADI TKALG+ +F L KLGI +LH P
Sbjct: 1430 VRRDVHFIRDELVNGTIATKHVSTTSQLADILTKALGRKEFADFLAKLGICNLHIP 1485
>UniRef100_Q9FIC5 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 1313 bits (3398), Expect = 0.0
Identities = 701/1493 (46%), Positives = 940/1493 (62%), Gaps = 88/1493 (5%)
Query: 29 LGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKP--TTPEKLEDWK 86
L S DNPG +I+ LRG NYDEW+ +R + +A++K+GF +G IP+P T P+ +DW
Sbjct: 26 LTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGTIPQPDETNPD-FDDWI 84
Query: 87 AVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQG 146
A +++++W+ TI SL +++S+ DD+ +WTH+++RF V NG RI +LK L C+Q
Sbjct: 85 ANNALVVSWMKLTIHESLATSMSHLDDSHDMWTHIQKRFGVKNGQRIQRLKTELATCRQ- 143
Query: 147 KGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLDGA 206
KG + Y+G+LS++W L Y + T + +V ED LH FLMGLD +
Sbjct: 144 KGTPIETYYGKLSQLWRSLADYQQAKTME----------EVRKEREEDKLHQFLMGLDES 193
Query: 207 -YATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAFKVAPDTRGKSKL 265
Y ++S LLS+ PLP++++AY + QDE + + D M +R +S
Sbjct: 194 MYGAVKSALLSRVPLPSLEEAYNTLTQDEESKSLSRLHDERNDEKMRRNATSSSRNQSAS 253
Query: 266 VDNSDKFCTHCNREGHDERTCFQIHGFPEWWGDRPRGGRGSGRGGATTGRDTTGRSGGRG 325
+ GRGS AT+ + +S GRG
Sbjct: 254 M------------------------------------GRGSSVVPATSFKGK--QSFGRG 275
Query: 326 RGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQQILDAL---NIS 382
N +A ++TT++ S S + A + GISG+ QW+Q+ L N +
Sbjct: 276 ASA-NHVANIGESTTAATSSMSGSQLTEA-----DRVGISGLNDEQWKQLRQMLKERNFN 329
Query: 383 KTKDRLHGKNDISWIIDTGASHHVTGNFSCLINGKRITNTPVGLPNGKDATAIQEGSVIL 442
T + SWIID+GA++H+TG L + + + LP+G+ T+ + G V L
Sbjct: 330 STNTKSSKFFLESWIIDSGATNHMTGTLEFLRDVCDMPPIMIKLPDGRLTTSTKHGRVYL 389
Query: 443 DGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGERIDGL 502
L L V FV L C+LISV+QL +C+ Q T+ +C+IQDR T TLIGAG++ +GL
Sbjct: 390 GSSLDLQEVFFVDGLHCHLISVSQLTRAKSCVFQITDKVCIIQDRITLTLIGAGKQQNGL 449
Query: 503 YFFRGVPKVHALMVEGDSAMDLWHKRLGHPSEKVLKFIPHVSQHSRSKNNRPCDVCPRAK 562
YFFRG V A M DS+ LWH RLGHPS KVLK + + +++ C++C +AK
Sbjct: 450 YFFRGTETV-ASMTRMDSSSQLWHCRLGHPSSKVLKLLSFSDSTGHAFDSKTCEICIKAK 508
Query: 563 QHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLTIVNDYSRAVWVYLLCNKTE 622
Q RD FPLS N +S FE+VHCDLWG YRT S CG+ Y+LT+V++Y+RAVW+YLL +K
Sbjct: 509 QTRDPFPLSNNKTSSPFEMVHCDLWGPYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQT 568
Query: 623 IETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNNGIVFETSCVGTPQQNGRVE 682
NF++ V+RQF KIK +RSDNGTEF CL +F ++GI+ ETSCVGTPQQNGRVE
Sbjct: 569 APMHLKNFISLVERQFSTKIKTIRSDNGTEFVCLSSFFVDHGIIHETSCVGTPQQNGRVE 628
Query: 683 RKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSSVLNYKTPYEKLFGKVPKFD 742
RKH+HI+NVARALRFQ LP++FW C LTA YLINRTP+ +L KTP+E L+ + P +
Sbjct: 629 RKHRHILNVARALRFQARLPIEFWSYCALTAAYLINRTPTPLLQGKTPFELLYNRPPPVN 688
Query: 743 NMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYE 802
++++FGC+CY HNQ+ GDKF SRS K IF+GYP+ KKGW++Y+ E+ VSRDV F E
Sbjct: 689 HIRVFGCICYVHNQKHGGDKFESRSNKSIFLGYPFAKKGWRVYNFETGVISVSRDVVFRE 748
Query: 803 HEFPF---------DVQLDTTHSTP--FIDSEYVTEDIGFETYDASFEGGGASMALQDNE 851
EFPF D QL +++ F+ SE T +S L D+
Sbjct: 749 TEFPFPASVFDSTPDSQLSPSNADQSFFLPSELQAPTPVSITTTLELTQSSSSTNLNDDN 808
Query: 852 ---QTQLQGGLHGDCNGADVAANEGLSVSGIEGEVEPAHEVDGADVVVMQEDDVEPGEPE 908
+ ++ + D+ + S P+ + A + +
Sbjct: 809 FRIPSDESSSVNEMSDNEDLNSPTTNESSPFLSPASPSLPLSPASLSLPLSPAAPSPSLP 868
Query: 909 VVAEREAIVASEMGRGMRNKVPNIKLKDFVTHTIRKVKSSKSSSAQEDASGTPYPITYFV 968
+AE E +G+G R K ++L D+ T + Q S TPYP+ +V
Sbjct: 869 KIAEPEP-EPELLGKGKRKKTQPVRLADYATTLLH----------QPHPSVTPYPLDNYV 917
Query: 969 SCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNETWVMEKLPPGK 1028
S +FS ++ +V A++ G EP ++KEA+ D WR A+ +EI +LE+ TW +E LPPGK
Sbjct: 918 SSSQFSAAYQAYVFAISLGIEPKSYKEAILDENWRCAVSDEIVSLENLGTWTVEDLPPGK 977
Query: 1029 KALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVAA 1088
KALG KWV+++K+ SDG++ER KARLVV G+ Q EGIDY ETFAPVAKMVTVR FL A
Sbjct: 978 KALGCKWVFRLKYKSDGTLERHKARLVVLGNKQTEGIDYSETFAPVAKMVTVRAFLQQVA 1037
Query: 1089 IKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYGLKQAPRCWFAK 1148
WEVHQMDVHNAFLHGDL+EEVY+K PPGF + D VCRL+K+LYGLKQAPRCWFAK
Sbjct: 1038 SLDWEVHQMDVHNAFLHGDLDEEVYIKFPPGFGSDDNRKVCRLRKALYGLKQAPRCWFAK 1097
Query: 1149 LVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLGVCFH 1208
L TAL YGF+Q SDYSLFT+ R I++++LVYVDDLII G+ + + FK YL CF+
Sbjct: 1098 LTTALNDYGFIQDISDYSLFTMERNGIRLHILVYVDDLIITGSSLDVITKFKGYLSSCFY 1157
Query: 1209 MKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAKPADFPMEQHHKLALVSG 1268
MKDLG+L+YFLG+EVAR+ GIYLCQRKYA++II ETGLLG PA P+EQ+HKLAL G
Sbjct: 1158 MKDLGILRYFLGIEVARSPAGIYLCQRKYAIDIITETGLLGVWPASHPLEQNHKLALAFG 1217
Query: 1269 KPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAALRVVRYLKKHPG 1328
+ DP YRRL+GRLIYL TRP+L+Y++H+LSQFM P +H EAALRVVRYLK PG
Sbjct: 1218 DTISDPSRYRRLVGRLIYLGTTRPELSYAIHMLSQFMSDPKADHMEAALRVVRYLKSSPG 1277
Query: 1329 QGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAEA 1388
QGILLRS++ L L GWCDS + SCP+T+RSLTGW + L SP+SWKTKK VSRSSAEA
Sbjct: 1278 QGILLRSNTPLVLTGWCDSGFDSCPITQRSLTGWFIQLGGSPISWKTKKHDVVSRSSAEA 1337
Query: 1389 EYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFHERTKHIEADCH 1448
EYR+MA T EL WL+ LL LG+S ++ + LY DS SA+ +A NPV+H RTKH+ D H
Sbjct: 1338 EYRAMADTVSELLWLRALLPALGISCNEPIMLYSDSLSAISLAANPVYHARTKHVGRDVH 1397
Query: 1449 FVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLGIRDLHAPEGG 1501
FVRD ++ G I +V T+ QLADI TKALG+ +F+ L KLGI +LH P G
Sbjct: 1398 FVRDEIIRGTIATKHVSTTSQLADIMTKALGRREFDAFLLKLGICNLHTPVCG 1450
>UniRef100_Q9SLF0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 1236 bits (3198), Expect = 0.0
Identities = 661/1345 (49%), Positives = 855/1345 (63%), Gaps = 107/1345 (7%)
Query: 174 CKCEGCICDINKQVTDFSAEDYLHHFLMGLDGA-YATIRSNLLSQDPLPNIDQAYQRVIQ 232
CKC GC+CD+ ED +H FL GLD A + T+RS+L+S+ P+ +++ Y V Q
Sbjct: 75 CKCGGCVCDLGALQEKDREEDKVHEFLSGLDDALFRTVRSSLVSRIPVQPLEEVYNIVRQ 134
Query: 233 DERLRQGEYSIQQNRDNVMAFKVAPDTRGKSKLVDNSDK--FCTHCNREGHDERTCFQIH 290
+E L + ++ ++ V AF + D DK C HCNR GH +C+ +
Sbjct: 135 EEDLLRNGANVLDDQREVNAFAAQMRPKLYQGRGDEKDKSMVCKHCNRSGHASESCYAVI 194
Query: 291 GFPEWWGDRPRGGRGSGRGGATTGRDTTGRSGGRGRGTYNALARANKATTSSRSIGGNSG 350
G+PEWWGDRPR R T GR T SGGRGRG A A AN+ T +
Sbjct: 195 GYPEWWGDRPRS-----RSLQTRGRGGTNSSGGRGRG---AAAYANRVTVPNHD---TYE 243
Query: 351 QSHAPPHSSEAAGISGITPAQWQQILDALNISKTKDRLHGKNDISWIIDTGASHHVTGNF 410
Q++ + G++G+T +QW+ I LN K A+ +T
Sbjct: 244 QANYALTDEDRDGVNGLTDSQWRTIKSILNSGKD----------------AATEKLTDMD 287
Query: 411 SCLINGKRITNTPVGLPNGKDATAIQEGSVILDGGLRLNNVLFVPQLTCNLISVTQLIDD 470
LI L +G++ +++EG+V L L + +V +V + +LIS+ QL+D+
Sbjct: 288 PILIV----------LADGRERISVKEGTVRLGSNLVMISVFYVEEFQSDLISIGQLMDE 337
Query: 471 SNCIVQFTNALCVIQDRTTRTLIGAGERIDGLYFFRGVPKVHALMVEGDSAMDLWHKRLG 530
+ C++Q ++ V+QDRT+R ++GAG R+ G + FR ++ V+ + +LWH R+G
Sbjct: 338 NRCVLQMSDRFLVVQDRTSRMVMGAGRRVGGTFHFRSTEIAASVTVKEEKNYELWHSRMG 397
Query: 531 HPSEKVLKFIPHVSQHSRSKN-NRPCDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGS 589
HP+ +V+ IP S S + N+ CDVC RAKQ R+SFPLS N +FEL++CDLWG
Sbjct: 398 HPAARVVSLIPESSVSVSSTHLNKACDVCHRAKQTRNSFPLSINKTLRIFELIYCDLWGP 457
Query: 590 YRTRSSCGAQYYLTIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDN 649
YRT S GA+Y+LTI++DYSR VW+YLL +K+E NF A DRQF+ KIK VRSDN
Sbjct: 458 YRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTVRSDN 517
Query: 650 GTEFNCLRDYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGEC 709
GTEF CL +F G++ E SCV TP++N RVERKH+H++NVARALRFQ +LP+QFWGEC
Sbjct: 518 GTEFLCLTKFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGEC 577
Query: 710 VLTACYLINRTPSSVLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRK 769
VLTA YLINRTPSSVLN TPYE+L K P+FD++++FG LCYAHN+ R GDKFA RSR+
Sbjct: 578 VLTAAYLINRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRR 637
Query: 770 CIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYEHEFPFDVQLDTTHSTPFIDSEYVTEDI 829
C+FVGYP+G+KGW+L+DLE E+ VSRDV F E EFPF + +H I+ E E +
Sbjct: 638 CVFVGYPHGQKGWRLFDLEQNEFFVSRDVVFSELEFPFRI----SHEQNVIEEE--EEAL 691
Query: 830 GFETYDASFEGGGASMALQDNEQTQLQGGLHGDCNGADVAAN------EGLSVSGIEGEV 883
D E ++ Q G C + ++ + E + S ++ EV
Sbjct: 692 WAPIVDGLIE--------EEVHLGQNAGPTPPICVSSPISPSATSSRSEHSTSSPLDTEV 743
Query: 884 EPAHEVDGA---------DVVVMQEDDVEPGEPEVVAEREAIVASEMGRGMRNKVPNIKL 934
P ++ + +P + VA V + RNK P + L
Sbjct: 744 VPTPATSTTSASSPSSPTNLQFLPLSRAKPTTAQAVAP--PAVPPPRRQSTRNKAPPVTL 801
Query: 935 KDFVTHT-IRKVKSSKSSSAQEDASGTPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNF 993
KDFV +T + + SK +S Y + RFS H +VA
Sbjct: 802 KDFVVNTTVCQESPSKLNSIL-------YQLQKRDDTRRFSASHTTYVA----------- 843
Query: 994 KEAVKDSGWRDAMRNEIQALEDNETWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKAR 1053
I A E+N TW +E LPPGK+A+GS+WVYK+KH+SDGS+ER KAR
Sbjct: 844 ----------------IDAQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVERYKAR 887
Query: 1054 LVVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVY 1113
LV G+ Q EG DY ETFAPVAKM TVR FL VA + WE+HQMDVHNAFLHGDL EEVY
Sbjct: 888 LVALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVY 947
Query: 1114 MKVPPGFKNTDPNLVCRLKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRG 1173
MK+PPGF+ + PN VCRL+K+LYGLKQAPRCWF KL TALKRYGF QS +DYSLFTL +G
Sbjct: 948 MKLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKG 1007
Query: 1174 EIQINVLVYVDDLIIAGNDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLC 1233
++I +L+YVDDLII GN A + FK YL CFHMKDLG LKYFLG+EVAR+ GIY+C
Sbjct: 1008 SVRIKILIYVDDLIITGNSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARSTTGIYIC 1067
Query: 1234 QRKYALEIIDETGLLGAKPADFPMEQHHKLALVSGKPLEDPEPYRRLIGRLIYLSVTRPD 1293
QRKYAL+II ETGLLG KPA+FP+EQ+HKL L + L DP+ YRRL+GRLIYL+VTR D
Sbjct: 1068 QRKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIYLAVTRLD 1127
Query: 1294 LAYSVHILSQFMQKPCEEHWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCDSDWASCP 1353
LA+SVHIL++FMQ+P E+HW AALRVVRYLK PGQG+ LR + ++ GWCDSDWA P
Sbjct: 1128 LAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSDWAGDP 1187
Query: 1354 LTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVS 1413
++RRS+TG+ V SP+SWKTKKQ TVS+SSAEAEYR+M+ EL WLKQLL LGVS
Sbjct: 1188 MSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLFSLGVS 1247
Query: 1414 HSQGMQLYCDSKSALHIAQNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLADI 1473
H Q M + CDSKSA++IA NPVFHERTKHIE D HFVRD V G+I P +V T+ QLADI
Sbjct: 1248 HVQPMIMCCDSKSAIYIATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGTTSQLADI 1307
Query: 1474 FTKALGKAQFEFLLRKLGIRDLHAP 1498
FTK LG+ F KLGIR+L+AP
Sbjct: 1308 FTKPLGRDCFSAFRIKLGIRNLYAP 1332
>UniRef100_Q9ZVW0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 1033 bits (2672), Expect = 0.0
Identities = 560/1245 (44%), Positives = 758/1245 (59%), Gaps = 66/1245 (5%)
Query: 27 FFLGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPTTPEK-LEDW 85
+ L S+DNPG +I+ + L G NY+EWS + + QAKRK GF+ G I KP E+W
Sbjct: 27 YTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFINGSISKPPLDNPDYENW 86
Query: 86 KAVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQ 145
+AV SM++ W+ +IEP ++ST+++ DA LW+ LKQRF V N + Q+K L C+Q
Sbjct: 87 QAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAACRQ 146
Query: 146 GKGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLDG 205
G+ V Y+GRL ++W+E Y CKC C C + + E+ +H F++GLD
Sbjct: 147 D-GQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDD 205
Query: 206 A-YATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAF-----KVAPDT 259
+ + + + L++ DP P++ + Y RV+++E+ R I++ + + + F +V D
Sbjct: 206 SRFGGLSATLIAMDPFPSLGEIYSRVVREEQ-RLASVQIREQQQSAIGFLTRQSEVTADG 264
Query: 260 RGKSKLVDNSDK--FCTHCNREGHDERTCFQIHGFPEWWGDRPRGG-RGS---GRGGATT 313
R S ++ + D+ C+HC R GH+++ C+QI GFP+WW +R GG RGS GRGG ++
Sbjct: 265 RTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTERTNGGGRGSSSRGRGGRSS 324
Query: 314 GRDTTGRSGGRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQ 373
G + +GR GRG+ T A ATTS+ S TP Q +
Sbjct: 325 GSNNSGR--GRGQVT------AAHATTSNLS------------------PFPEFTPDQLR 358
Query: 374 QILDALNISK--TKDRLHGKNDISWII-DTGASHHVTGNFSCLINGKRITNTPVGLPNGK 430
I + T D+L GK + +I DTGASHH+TG S L N I + VG +G+
Sbjct: 359 VITQMIQNKNNGTSDKLSGKMKLGDVILDTGASHHMTGQLSLLTNIVTIPSCSVGFADGR 418
Query: 431 DATAIQEGSVILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTR 490
AI G+ L + L+NVL+VP L C+LISV++L+ C+ FT+ +CV+QDR +R
Sbjct: 419 KTFAISMGTFKLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSR 478
Query: 491 TLIGAGERIDGLYFFR--GVPKVHALMVEGDSAMDLWHKRLGHPSEKVLKFIPHVSQHSR 548
TLIG GE DG+Y+ VH + + D A LWH+RLGHPS VL +P S S
Sbjct: 479 TLIGTGEERDGVYYLTDAATTTVHKVDITTDHA--LWHQRLGHPSFSVLSSLPLFSGSSC 536
Query: 549 SKNNRPCDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLTIVNDY 608
S ++R CDVC RAKQ R+ FP S N + F L+HCD+WG YR SSCGA Y+LTIV+D+
Sbjct: 537 SVSSRSCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDF 596
Query: 609 SRAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNNGIVFE 668
SR+VW YLL K+E+ ++ NF+A+ ++QF K +K +RSDNGTEF CL YF GIV +
Sbjct: 597 SRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFMCLSSYFKEQGIVHQ 656
Query: 669 TSCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSSVLNYK 728
TSCVGTPQQNGRVERKH+HI+NV+RAL FQ LP++FWGE V+TA YLINRTPSS+ N
Sbjct: 657 TSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLINRTPSSIHNGL 716
Query: 729 TPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLE 788
+PYE L G P +D +++FG CYAH RD DKF RSR CIFVGYP+G+KGWK+YDL
Sbjct: 717 SPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLS 776
Query: 789 SKEYIVSRDVKFYEHEFPFDVQLDTTHSTPFIDSEYVTEDIGFETYDASFEGGGASMALQ 848
+ E+IVSRDV F E+ FP+ T TP + +T D + + + G L
Sbjct: 777 TNEFIVSRDVVFRENVFPYATNEGDTIYTPPVTCP-ITYDEDWLPFTTLEDRGSDENYLS 835
Query: 849 DN----EQTQLQGGLHGDCNGADVAANEGLSVSGIEGEVEPAHEVDGADVVVMQEDDVEP 904
D H ++ LS S V P + +V P
Sbjct: 836 DPPVCVTNVSESDTEHDTPQSLPTPVDDPLSPS---TSVTPTQTPTNSSSSTSPSTNVSP 892
Query: 905 GEPEVVAEREAIVASEMGRGMRNKVPNIKLKDFVTH-------TIRKVKSSKSSSAQEDA 957
+ + I + +G R +LKD++ + T + S S S+
Sbjct: 893 PQQDTT---PIIENTPPRQGKRQVQQPARLKDYILYNASCTPNTPHVLSPSTSQSSSSIQ 949
Query: 958 SGTPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNE 1017
YP+T ++S E FS H+ F+AA+TA EP +FKE VK W DAM E+ ALE N+
Sbjct: 950 GNLQYPLTDYISDECFSAGHKVFLAAITANDEPKHFKEDVKVKVWNDAMYKEVDALEVNK 1009
Query: 1018 TWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKM 1077
TW + LP GK A+GS+WVYK K ++DG++ER KARLVV G++QIEG DY ETFAPV KM
Sbjct: 1010 TWDIVDLPTGKVAIGSQWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKM 1069
Query: 1078 VTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYG 1137
TVRT L + A +WEV+QMDVHNAFLHGDLEEEVYMK+PPGF+++ P+ VCRL+KSLYG
Sbjct: 1070 TTVRTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYG 1129
Query: 1138 LKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALK 1197
LKQAPRCWF KL ALKR+GF+Q Y DYS F+ I++ VLVYVDDLII GND ++
Sbjct: 1130 LKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDLIICGNDEYMVQ 1189
Query: 1198 IFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEII 1242
FK YLG CF MKDLG LKYFLG+EV+R + + A+ I+
Sbjct: 1190 KFKEYLGRCFSMKDLGKLKYFLGIEVSRGPDAPREAHLEAAMRIV 1234
Score = 246 bits (627), Expect = 5e-63
Identities = 123/191 (64%), Positives = 152/191 (79%)
Query: 1308 PCEEHWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLD 1367
P E H EAA+R+VRYLK PGQGILL ++ +L LE +CDSD+ SCPLTRRSL+ +VVLL
Sbjct: 1222 PREAHLEAAMRIVRYLKGSPGQGILLSANKDLTLEVYCDSDFQSCPLTRRSLSAYVVLLG 1281
Query: 1368 LSPVSWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSA 1427
SP+SWKTKKQ TVS SSAEAEYR+M++ E+KWL +LL +LG++ + +L+CDSK+A
Sbjct: 1282 GSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKELGITLAAPTRLFCDSKAA 1341
Query: 1428 LHIAQNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLL 1487
+ IA NPVFHERTKHIE DCH VRDAV GII +V TS QLADIFTKALG+ QF +L+
Sbjct: 1342 ISIAANPVFHERTKHIERDCHSVRDAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLM 1401
Query: 1488 RKLGIRDLHAP 1498
KLGI++LH P
Sbjct: 1402 SKLGIQNLHTP 1412
>UniRef100_Q9C8F4 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 902 bits (2330), Expect = 0.0
Identities = 504/1197 (42%), Positives = 716/1197 (59%), Gaps = 91/1197 (7%)
Query: 27 FFLGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPTTPEK-LEDW 85
++L +D+P +V+TP+ L G NY+ W++ R + QAK+K GF++G + KP++ W
Sbjct: 25 YYLHPSDHPHHVLTPMLLNGENYERWAKLTRNNLQAKQKLGFIDGTLTKPSSDSPDYPRW 84
Query: 86 KAVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQ 145
SML+ WL +++P ++ ++S D+A +W L+ R+ V N +R+ QLK + C+Q
Sbjct: 85 LQTNSMLVGWLYASLDPQVQKSISVVDNARVMWESLRTRYSVGNASRVHQLKYDIVACRQ 144
Query: 146 GKGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLDG 205
G+ + YFG+L +WD+L Y TC C C + + + +H FLMGLD
Sbjct: 145 D-GQTAANYFGKLKVMWDDLDDYEPLLTCCCNRPSCTHRVRQSQRRDHERIHQFLMGLDA 203
Query: 206 A-YATIRSNLL---SQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNV-MAFKVAPDTR 260
A + T R+N+L S+D ++D Y +I +ER S ++ D V A + +
Sbjct: 204 AKFGTSRTNILGRLSRDDNISLDSIYSEIIAEERHLTITRSKEERVDAVGFAVQTGVNAI 263
Query: 261 GKSKLVDNSDKFCTHCNREGHDERTCFQIHGFPEWWGDRPRGGRGSGRGGATTGRDTTGR 320
V+N CTHC R H TCF++HG PEW+ ++ G SGRG GR +T R
Sbjct: 264 ASVTRVNNMGP-CTHCGRSNHSADTCFKLHGVPEWYTEK-YGDTSSGRG---RGRSSTPR 318
Query: 321 SGGRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQQILDAL- 379
GRGRG N+ +AN A TS H +SE + I G++ W I + L
Sbjct: 319 --GRGRGHGNSY-KANNAQTS-----------HPSSSASEFSDIPGVSKEAWSAIRNLLK 364
Query: 380 -NISKTKDRLHGK-NDISWIIDTGASHHVTGNFSCLINGKRITNTPVGLPNGKDATAIQE 437
+ + + ++L GK N + ++ID+GASHH+TG L I ++ V LPN K A ++
Sbjct: 365 QDTATSSEKLSGKTNCVDFLIDSGASHHMTGFLDLLTEIYEIPHSVVVLPNAKHTIATKK 424
Query: 438 GSVILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGE 497
G++IL ++L +VLFVP L+C LISV +L+ + +C FT+ +CVIQDRT++ LIG G
Sbjct: 425 GTLILGANMKLTHVLFVPDLSCTLISVARLLRELHCFAIFTDKVCVIQDRTSKMLIGVGT 484
Query: 498 RIDGLYFFRGVPKV--HALMVEGDSAMDLWHKRLGHPSEKVLKFI-PHVSQHSRSKNNRP 554
+G+Y + V A +V+ + LWH RLGHPS KVL + P + ++
Sbjct: 485 ESNGVYHLQRAEVVATSANVVKWKTNKALWHMRLGHPSSKVLSSVLPSLEDFDSCSSDLK 544
Query: 555 --CDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLTIVNDYSRAV 612
CDVC RAKQ R SF S N A F +H D+WG Y+ SSCGA Y+LTIV+D+SRAV
Sbjct: 545 TICDVCVRAKQTRASFSESFNKAEECFSFIHYDVWGPYKHASSCGAHYFLTIVDDHSRAV 604
Query: 613 WVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNNGIVFETSCV 672
W++L+ K+E+ ++ F+A RQF+K++K VRS+NGTEF L+ YF GIV + SCV
Sbjct: 605 WIHLMLAKSEVASLLQQFIAMASRQFNKQVKTVRSNNGTEFMSLKSYFAERGIVHQISCV 664
Query: 673 GTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSSVLNYKTPYE 732
T QQNGRVERKH+HI+NVAR+L FQ LP+ FW E VLTA YLINRTP+ +L+ KTPY+
Sbjct: 665 YTHQQNGRVERKHRHILNVARSLLFQAELPISFWEESVLTAAYLINRTPTPILDGKTPYK 724
Query: 733 KLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLESKEY 792
L+ + P + ++++FG LC+A DKF R RKCIFVGYP+G+KGW++YD+ES+ +
Sbjct: 725 ILYSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQKGWRIYDIESQIF 784
Query: 793 IVSRDVKFYEHEFPF-DVQLDTTHSTP--FIDSEYVTEDIGF-ETYDASFEGGGASMALQ 848
VSRDV F E FPF D + T S+P I S + D F + Y
Sbjct: 785 FVSRDVVFQEDIFPFADKKNKDTFSSPAAVIPSPILPYDDEFLDIYQI------------ 832
Query: 849 DNEQTQLQGGLHGDCNGADVAANEGLSVSGIEGEVEPAHEVDGADVVVMQEDDVEPGEPE 908
DV A L PA ++ +D P P
Sbjct: 833 -----------------GDVPATNPL----------PA---------IIDVNDSPPSSPI 856
Query: 909 VVAEREAIVASEMGRGMRNKVPNIKLKDFVTHTIRKVKSSKSSSAQEDASGT-PYPITYF 967
+ A A + RG+R + N++LKD+ T++ + +S+ D GT YP+ +
Sbjct: 857 ITATPAAASPPPLRRGLRQRQENVRLKDYQTYSAQ----CESTQTLSDNIGTCIYPMANY 912
Query: 968 VSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNETWVMEKLPPG 1027
VS E FS +++F+AA++ P + +A+++ WR+A+ E+ ALED TW + KLP G
Sbjct: 913 VSGEIFSPSNQHFLAAISMVDPPQTYNQAIREKEWRNAVFFEVDALEDQGTWDITKLPQG 972
Query: 1028 KKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVA 1087
KA+GSKWV++IK++S+G++ER KARLV G+HQ EGID+ +TFAPV KM TVR L VA
Sbjct: 973 VKAIGSKWVFRIKYNSNGTVERYKARLVALGNHQKEGIDFTKTFAPVVKMQTVRLLLDVA 1032
Query: 1088 AIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYGLKQAPRCWFA 1147
A K WE+HQMDVHNAFLHGDL+E++YMK PPGFK TDP+LVC+LKKS+YGLKQAPRCWF
Sbjct: 1033 AAKDWELHQMDVHNAFLHGDLKEDIYMKPPPGFKTTDPSLVCKLKKSIYGLKQAPRCWFE 1092
Query: 1148 KLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLG 1204
KL T+L ++GF QS DYSLFT RG ++V+VYVDD++I G + K LG
Sbjct: 1093 KLSTSLLKFGFTQSKKDYSLFTSIRGSKVLHVIVYVDDVVICGKAVRENNTSKLALG 1149
>UniRef100_O81617 F8M12.17 protein [Arabidopsis thaliana]
Length = 1633
Score = 869 bits (2246), Expect = 0.0
Identities = 533/1500 (35%), Positives = 788/1500 (52%), Gaps = 146/1500 (9%)
Query: 29 LGSNDNPGNVITPIQLR-GLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPTTPEK-LEDWK 86
L ++D+ G V+ +L ++ W R+I + + K GF++G I KP + W
Sbjct: 37 LHTSDHAGLVLVSERLNTASDFHSWRRSIWMALNVRNKLGFIDGTIVKPPLDHRDYGAWS 96
Query: 87 AVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQG 146
+ WL+N++ + +L + AE +W ++ RF + R+ ++ L + +QG
Sbjct: 97 RCNDTVSTWLMNSVSKKIGQSLLFIPTAEGIWKNMLSRFKQDDAPRVYDIEQRLSKIEQG 156
Query: 147 KGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLDGA 206
++SAY+ L +W+E YV P C C C CD + ++ FLMGL+ +
Sbjct: 157 S-MDISAYYTELQTLWEEHKNYVDLPVCTCGRCECDAAVKWERLQQRSHVTKFLMGLNES 215
Query: 207 YATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAFKVAPDTRGKSKLV 266
Y R ++L P+ I++A+ V QDER + A + P V
Sbjct: 216 YEQTRRHILMLKPIRTIEEAFNIVTQDERQK--------------AIRPTPK-------V 254
Query: 267 DNSDKF----CTHCNREGHDERTCFQIHGFPEWWGDRPRGGRGSGRGGATTGRDTTGRSG 322
DN D+ CT+C + GH + C++I G+P G AT+ R ++
Sbjct: 255 DNQDQLKLPLCTNCGKVGHTVQKCYKIIGYPP------------GYKAATSYRQPQIQTQ 302
Query: 323 GRGR-----------------GTYNALARANKATTSSRSIGGNSGQSHAPPHSSEA-AGI 364
R + +NA R + +S I +S + H A
Sbjct: 303 PRMQMPQQSQPRMQQPIQHLISQFNAQVRVQEPAATS--IYTSSPTATITEHGLMAQTST 360
Query: 365 SGITPAQWQQI-LDALNISKTKDRLHGKNDI----SWIIDTGASHHVTGNFSCLINGKRI 419
SG P + + N++ L ++ +WIID+GAS HV + + +
Sbjct: 361 SGTIPFPSTSLKYENNNLTFQNHTLSSLQNVLSSDAWIIDSGASSHVCSDLTMFRELIHV 420
Query: 420 TNTPVGLPNGKDATAIQEGSVILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTN 479
+ V LPNG G++ + L L+NVL VP NLISV C ++ T
Sbjct: 421 SGVTVTLPNGTRVAITHTGTICITSTLILHNVLLVPDFKFNLISV--------CCLELTR 472
Query: 480 ALCVIQDRTTRTLIGAGERIDGLYFFRGVPKVHALMVEGDSAMDLWHKRLGHPS----EK 535
L +IG G+ + LY + + ++ HPS +K
Sbjct: 473 GL----------MIGRGKTYNNLYILETQRTSFSPSLPAATSR--------HPSLPALQK 514
Query: 536 VLKFIPHVSQHSRSKNNRPCDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSS 595
++ IP + S + ++ C + P AKQ R ++ N A+S F+L+H D+WG + S
Sbjct: 515 LVSSIPSLKSVSSTASH--CRISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGPFSIESV 572
Query: 596 CGAQYYLTIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNC 655
G +Y+LT+V+D +R WVY++ NK+E+ +F FV + Q++ KIK +RSDN E
Sbjct: 573 DGFRYFLTLVDDCTRTTWVYMMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKEL-A 631
Query: 656 LRDYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACY 715
+ G++ + SC TPQQN VERKHQH++N+AR+L FQ ++P+Q+W +CVLTA Y
Sbjct: 632 FTKFVKEQGMIHQFSCAYTPQQNSVVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAY 691
Query: 716 LINRTPSSVLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGY 775
LINR PS +L+ KTP+E L K+P + +K CLCYA D +KF+ R+R C+F+GY
Sbjct: 692 LINRLPSPLLDNKTPFELLLKKIPDYTLLK--SCLCYASTNVHDRNKFSPRARPCVFLGY 749
Query: 776 PYGKKGWKLYDLESKEYIVSRDVKFYEHEFPFDVQLDTTHSTPFIDSEYVTEDIGFETYD 835
P G KG+K+ DLES ++R+V F+E +FPF S + + +
Sbjct: 750 PSGYKGYKVLDLESHSISITRNVVFHETKFPFKTSKFLKESVDMFPNSILPLPAPLHFVE 809
Query: 836 ASFEGGGASMALQDNEQTQLQGGLHGDCNGADVAANEGLSVSGIEGEVEPAHEVDGADVV 895
SM L D+ L D N A + N S S I + D +
Sbjct: 810 --------SMPLDDD--------LRADDNNASTS-NSASSASSIP-PLPSTVNTQNTDAL 851
Query: 896 VMQEDDVEPGEPEVVAEREAIVASEMGRGMRNKVPNIKLKDFVTHTIRKVKSSKSSSAQE 955
+ + V P+ R A + + N VP + T T + + SSS
Sbjct: 852 DIDTNSVPIARPK----RNAKAPAYLSEYHCNSVPFLSSLSPTTSTSIE---TPSSSIPP 904
Query: 956 DASGTPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALED 1015
TPYP++ +S ++ + +++ A EP F +A+K W A E+ ALE
Sbjct: 905 KKITTPYPMSTAISYDKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQ 964
Query: 1016 NETWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVA 1075
N+TW++E L GK +G KWV+ IK++ DGSIER KARLV G Q EGIDY ETF+PVA
Sbjct: 965 NKTWIVESLTEGKNVVGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVA 1024
Query: 1076 KMVTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFK-----NTDPNLVCR 1130
K +V+ L +AA W + QMDV NAFLHG+L+EE+YM +P G+ + VCR
Sbjct: 1025 KFGSVKLLLGLAAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCR 1084
Query: 1131 LKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAG 1190
L KSLYGLKQA R W+ +L + F+QS +D ++F I VLVYVDDL+IA
Sbjct: 1085 LLKSLYGLKQASRQWYKRLSSVFLGANFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIAS 1144
Query: 1191 NDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGA 1250
ND +A++ K L F +KDLG ++FLGLE+AR+ EGI +CQRKYA ++++ GL G
Sbjct: 1145 NDSSAVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGC 1204
Query: 1251 KPADFPMEQHHKLALVSGKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCE 1310
KP+ PM+ + L G L + YR L+GRL+YL +TRPD+ ++VH LSQF+ P +
Sbjct: 1205 KPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTD 1264
Query: 1311 EHWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSP 1370
H +AA +V+RYLK +PGQ D+DW +C +RRS+TG+ + L S
Sbjct: 1265 IHMQAAHKVLRYLKGNPGQ----------------DADWGTCKDSRRSVTGFCIYLGTSL 1308
Query: 1371 VSWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHI 1430
++WK+KKQ VSRSS E+EYRS+A TCE+ WL+QLL DL V+ + +L+CD+KSALH+
Sbjct: 1309 ITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHL 1368
Query: 1431 AQNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKL 1490
A NPVFHERTKHIE DCH VRD + AG + L+VPT QLADI TK L F LL+++
Sbjct: 1369 ATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLHPGPFHSLLKRI 1428
>UniRef100_Q9LGZ8 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 828 bits (2139), Expect = 0.0
Identities = 475/1110 (42%), Positives = 645/1110 (57%), Gaps = 77/1110 (6%)
Query: 31 SNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPTTPEKLEDWKAVQS 90
++DNPG +I+ + L+ NY EW+ + S QAK+K GF++G IPKPTT L WKA S
Sbjct: 18 ASDNPGALISSVILKEDNYSEWAEELMNSLQAKQKLGFLDGTIPKPTTEPALSSWKAANS 77
Query: 91 MLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQGKGEE 150
M+I W+ +I+P++RST+++ DA+ LW LKQRF NG R LK + CKQ G+
Sbjct: 78 MIIGWIRTSIDPTIRSTVAFVSDAKDLWDSLKQRFSNGNGVRKQLLKDEILACKQD-GQS 136
Query: 151 VSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLDGAYATI 210
V Y+GRL+++W+EL Y TC CE DI K+ D D +H FL+ LD + I
Sbjct: 137 VLVYYGRLTKLWEELQNYKTSRTCTCEAAP-DIAKERED----DKVHQFLLNLDERFRPI 191
Query: 211 RSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAFKV-------APDTRGKS 263
RS + QDPLP ++Q Y RVI +E+ + + F V P S
Sbjct: 192 RSTITVQDPLPALNQVYSRVIHEEQNLNASRIKDDIKTEAVGFTVQATPLPPTPQVAAVS 251
Query: 264 --KLVDNSDKFCTHCNREGHDERTCFQIHGFPEWWGDRPRGGRGSGRGGATTGRDTTGRS 321
+ D S CTH +R+GHD CF +HG+P+WW ++ G GS GR T+GR
Sbjct: 252 APRFRDRSSLTCTHYHRQGHDITECFLVHGYPDWWLEQ-NGSNGSA------GRGTSGR- 303
Query: 322 GGRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQQILDALNI 381
G GRG N R++ ++ SR G + S PP +S + I Q +L A N
Sbjct: 304 GNNGRGNNNRGGRSS--SSGSRGKGRANAASTHPPPTSTPSNADQIN--QLISLLQAQNP 359
Query: 382 SKTKDRLHGKNDISW-IIDTGASHHVTGNFSCLINGKRITNTPVGLPNGKDATAIQEGSV 440
+ + +L GK ++ IIDTGASHH+TG+ + L N + I +PV P+G + A + G++
Sbjct: 360 ATSSQKLSGKTFTTYVIIDTGASHHMTGDITLLTNVEDIIPSPVTKPDGTASRATKRGTL 419
Query: 441 ILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGERID 500
L L +VLFVP C LISV +L+ + C+ FT+ LC +QDR TRTLIGAGE +
Sbjct: 420 ALHNAYVLPDVLFVPDFNCTLISVAKLLKHTGCVAIFTDTLCFLQDRFTRTLIGAGEERE 479
Query: 501 GLYFFRGV--PKVHALMVEGDSAMDLWHKRLGHPSEKVLKFIPH-VSQHSRSKNNRPCDV 557
G+Y+F GV +V+ E SA LWH RLGHPS VL P S S + + CD+
Sbjct: 480 GVYYFTGVLAARVNKGFKESSSAT-LWHHRLGHPSTGVLLSFPEFASSSSDLEIIKSCDI 538
Query: 558 CPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLTIVNDYSRAVWVYLL 617
C RAKQ R+ F S N FEL+HCD+WG YRT +SCG+ Y+LTIV+D+SR+VW +L+
Sbjct: 539 CYRAKQAREVFSPSLNKTTVCFELIHCDVWGPYRTPASCGSVYFLTIVDDFSRSVWTFLM 598
Query: 618 CNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNNGIVFETSCVGTPQQ 677
K+E+ + NF A +RQF K IK V SDNGTEF CL+ +F GI+ +TSCV T QQ
Sbjct: 599 AEKSEVSRLIRNFCAMSERQFCKSIKTVHSDNGTEFMCLKSFFQEQGIIHQTSCVDTRQQ 658
Query: 678 NGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSSVLNYKTPYEKLFGK 737
NGRVERKH+HI+NVAR FQ HLP +F GE +LTA +LINRTP+ +L+ K+PYE LFG
Sbjct: 659 NGRVERKHRHILNVARTCLFQSHLPRKFRGESILTAIHLINRTPTKILHGKSPYEVLFGS 718
Query: 738 VPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRD 797
P + ++ FGCLCYAH + RD DKF+ RSR+C+FVGYPYGKKGW+LYDLE ++ VSRD
Sbjct: 719 RPSYSALRTFGCLCYAHYRARDKDKFSERSRRCVFVGYPYGKKGWRLYDLEKNKFFVSRD 778
Query: 798 VKFYEHEFPFDVQLDTT---------HSTPFIDSEYV--TEDIGFE-TYDASFEGGGASM 845
V F E FP+ ++ ST F D +++ DI T D S ++
Sbjct: 779 VVFQETVFPYGTIESSSIPFSPSMFPPSTIFHDDDWLQPQADISISPTVDLSSPTTIPTL 838
Query: 846 ALQD-----NEQTQLQGGLHGDCNGADVAANEGLSVSGIEGEVEPAHEVDGADVVVMQED 900
T H +N G S S + P+ + +
Sbjct: 839 TTTSPPVIVTTPTSPLSLSHPMVLTPSSNSNPG-SPSSPSSPLPPS---SSPSLSPLSSP 894
Query: 901 DVEPGEPEVVAEREAIVASEMGRGMRNKVPNIKLKDFVTH--TIRKVKSSKSSSAQEDAS 958
+ PG PE+ +G+G R K+P++ LKDFV H T + ++ S+A
Sbjct: 895 EASPGLPEL-----------LGKGHRQKLPSVLLKDFVAHHATAPSLTNNTPSTASSATF 943
Query: 959 GTPY-----------PITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMR 1007
P I +S E+FS HR F+ A+T+ EP ++ +A + W AM
Sbjct: 944 TDPSLSKTVCGKILDSIPISISDEKFSGLHRVFMVAITSDTEPTSYHQASQIKEWCAAMG 1003
Query: 1008 NEIQALEDNETWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDY 1067
EI ALE+N TW + LPPGKKA+GSKWVYK+K++SDG++ER KARLV G+ Q+EG D+
Sbjct: 1004 LEITALEENHTWDITTLPPGKKAIGSKWVYKLKYNSDGTLERHKARLVALGNRQVEGSDF 1063
Query: 1068 DETFAPVAKMVTVRTFLAVAAIKKWEVHQM 1097
ETFAPVAKM TVR LAVAA ++WEVHQM
Sbjct: 1064 TETFAPVAKMTTVRFLLAVAAARQWEVHQM 1093
>UniRef100_Q8L700 Hypothetical protein [Arabidopsis thaliana]
Length = 776
Score = 789 bits (2038), Expect = 0.0
Identities = 411/783 (52%), Positives = 525/783 (66%), Gaps = 45/783 (5%)
Query: 744 MKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYEH 803
++ FGCLCYAH + R+ DKF SRSRKC+F+GYP+GKK W++YDLE+ + SRDV+F+E
Sbjct: 2 LRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHED 61
Query: 804 EFPFDVQLDTTHSTPFIDSEYVTED----IGFETYDASFEGGGASMALQDNEQTQLQGGL 859
+P+ + P V +D I + + + +S Q Q +
Sbjct: 62 IYPYATATQSNVPLPPPTPPMVNDDWFLPISTQVDSTNVDSSSSSSPAQSGSIDQPPRSI 121
Query: 860 HGDCNGADVAANEGLSVSGIEGEVEPAHEVDGADVVVMQEDDVE------------PGEP 907
+ + E + I P+ +D + + D E PG P
Sbjct: 122 DQSPSTSTNPVPE--EIGSIVPSSSPSRSIDRSTSDLSASDTTELLSTGESSTPSSPGLP 179
Query: 908 EVVAEREAIVASEMGRGMRNKVPNIKLKDFVTHTIRKVKSSK----------------SS 951
E+ +G+G R K ++ LKDFVT+T K K++ S
Sbjct: 180 EL-----------LGKGCREKKKSVLLKDFVTNTTSKKKTASHNIHSPSQVLPSGLPTSL 228
Query: 952 SAQEDASGTPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQ 1011
SA + T YP++ F++ +S H F+AA+ EP +FK+A+ W +AM EI
Sbjct: 229 SADSVSGKTLYPLSDFLTNSGYSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEID 288
Query: 1012 ALEDNETWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETF 1071
ALE N TW + LP GKKA+ SKWVYK+K++SDG++ER KARLVV G+HQ EG+D+ ETF
Sbjct: 289 ALEANHTWDITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETF 348
Query: 1072 APVAKMVTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRL 1131
APVAK+ TVRT LAVAA K WEVHQMDVHNAFLHGDLEEEVYM++PPGFK +DP+ VCRL
Sbjct: 349 APVAKLTTVRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRL 408
Query: 1132 KKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGN 1191
+KSLYGLKQAPRCWF+KL TAL+ GF QSY DYSLF+L G+ I+VLVYVDDLI+AGN
Sbjct: 409 RKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGN 468
Query: 1192 DIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAK 1251
++ A+ FK+ L CFHMKDLG LKYFLGLEV+R +G L QRKYAL+I+ ETGLLG K
Sbjct: 469 NLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCK 528
Query: 1252 PADFPMEQHHKLALVSGKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEE 1311
P+ P+ +HKLA ++G +PE YRRL+GR IYL++TRPDL+Y+VHILSQFMQ P
Sbjct: 529 PSAVPIALNHKLASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVA 588
Query: 1312 HWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPV 1371
HWEAALR+VRYLK P QGI LRSDS L + +CDSD+ +CPLTRRSL+ +VV L SP+
Sbjct: 589 HWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPI 648
Query: 1372 SWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIA 1431
SWKTKKQ TVS SSAEAEYR+MA T ELKWLK LL DLGV HS M+L+CDS++A+HIA
Sbjct: 649 SWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHCDSEAAIHIA 708
Query: 1432 QNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLG 1491
NPVFHERTKHIE+DCH VRDAV+ +I ++ T Q+AD+ TK+L + FE LL LG
Sbjct: 709 ANPVFHERTKHIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPTFERLLSTLG 768
Query: 1492 IRD 1494
+ D
Sbjct: 769 VTD 771
>UniRef100_Q9FL75 Retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 724 bits (1868), Expect = 0.0
Identities = 349/531 (65%), Positives = 430/531 (80%)
Query: 968 VSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNETWVMEKLPPG 1027
+SC RF+ H+ F+AAVTAG EP + EA+ D WR+AM EI++L N+T+ + LPPG
Sbjct: 578 MSCNRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPG 637
Query: 1028 KKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVA 1087
K+ALG+KWVYKIK+ SDG+IER KARLVV G+ Q EG+DYDETFAPVAKM TVR FL VA
Sbjct: 638 KRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVA 697
Query: 1088 AIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYGLKQAPRCWFA 1147
A + W VHQMDVHNAFLHGDL+EEVYMK+P GF+ DP+ VCRL KSLYGLKQAPRCWF+
Sbjct: 698 AARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFS 757
Query: 1148 KLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLGVCF 1207
KL +ALK+YGF QS SDYSLF+ + + ++VLVYVDDLII+G+ A+ FK+YL CF
Sbjct: 758 KLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFKSYLESCF 817
Query: 1208 HMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAKPADFPMEQHHKLALVS 1267
HMKDLG+LKYFLG+EV+RN +G YL QRKY L+II E GLLGA+P+ FP+EQ+HKL+L +
Sbjct: 818 HMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLST 877
Query: 1268 GKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAALRVVRYLKKHP 1327
L D YRRL+GRLIYL+VTRP+L+YSVH L+QFMQ P ++HW AA+RVVRYLK +P
Sbjct: 878 SPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNP 937
Query: 1328 GQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAE 1387
GQGILL S S L++ GWCDSD+A+CPLTRRSLTG+ V L +P+SWKTKKQPTVSRSSAE
Sbjct: 938 GQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAE 997
Query: 1388 AEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFHERTKHIEADC 1447
AEYR+MA T EL WLK++L DLGVSH Q M+++ DSKSA+ ++ NPV HERTKH+E DC
Sbjct: 998 AEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDC 1057
Query: 1448 HFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLGIRDLHAP 1498
HF+RDA++ GII +VP+ QLADI TKALG+ + + LRKLGI D+HAP
Sbjct: 1058 HFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGILDVHAP 1108
Score = 468 bits (1204), Expect = e-130
Identities = 215/407 (52%), Positives = 295/407 (71%), Gaps = 1/407 (0%)
Query: 402 ASHHVTGNFSCLINGKRITNTPVGLPNGKDATAIQEGSVILDGGLRLNNVLFVPQLTCNL 461
ASHH+TGN L + + ++ + L +G A+ EG+V L L L +V +V +L +L
Sbjct: 169 ASHHMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESDL 228
Query: 462 ISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGERIDGLYFFRGVPKVHALMVEGDSA 521
ISV Q++D+++C+VQ + VIQDRTTR + G G+R +G + FRG+ A+ +
Sbjct: 229 ISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAP 288
Query: 522 MDLWHKRLGHPSEKVLKFIPH-VSQHSRSKNNRPCDVCPRAKQHRDSFPLSENNAASLFE 580
DLWH+RLGH S+K++ +P + + CD C RAKQ RD+FPLS+N + F+
Sbjct: 289 FDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLSDNRSMDSFQ 348
Query: 581 LVHCDLWGSYRTRSSCGAQYYLTIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQFDK 640
L+HCD+WG YRT S GA+Y+LTIV+DYSR VWVYL+ +K+E + +F+A V+RQFD
Sbjct: 349 LIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQFDT 408
Query: 641 KIKKVRSDNGTEFNCLRDYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARALRFQGH 700
+IK VRSDNGTEF C+R+YF + GI ETSCVGTP QNGRVERKH+HI+N+ARALRFQ +
Sbjct: 409 EIKTVRSDNGTEFLCMREYFLHKGITHETSCVGTPHQNGRVERKHRHILNIARALRFQSY 468
Query: 701 LPMQFWGECVLTACYLINRTPSSVLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDG 760
LP+QFWGEC+L+A YLINRTPS +L K+PYE L+ P + ++++FG LCYAHNQ G
Sbjct: 469 LPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSHLRVFGSLCYAHNQNHKG 528
Query: 761 DKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYEHEFPF 807
DKF +RSR+C+FVGYP+G+KGW+L+DLE +++ VSRDV F E EFP+
Sbjct: 529 DKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 575
Score = 113 bits (282), Expect = 5e-23
Identities = 53/142 (37%), Positives = 94/142 (65%), Gaps = 4/142 (2%)
Query: 29 LGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPT--TPEKLEDWK 86
L + DN G VI+ L+ NY+EW+ +T+ ++++K+GF++G IP+P +P+ LEDW
Sbjct: 23 LTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPD-LEDWL 81
Query: 87 AVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLGECKQG 146
+ ++L++W+ TI+ L + +S+ D A LW +++RF V NG + ++KA L CKQ
Sbjct: 82 TINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFFVSNGPKNQKMKADLATCKQ- 140
Query: 147 KGEEVSAYFGRLSRIWDELVTY 168
+G + Y+G+L++IWD + +Y
Sbjct: 141 EGMTMEGYYGKLNKIWDNINSY 162
>UniRef100_O65452 LTR retrotransposon like protein [Arabidopsis thaliana]
Length = 1109
Score = 723 bits (1867), Expect = 0.0
Identities = 348/531 (65%), Positives = 430/531 (80%)
Query: 968 VSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNETWVMEKLPPG 1027
+SC RF+ H+ F+AAVTAG EP + EA+ D WR+AM EI++L N+T+ + LPPG
Sbjct: 578 MSCNRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPG 637
Query: 1028 KKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVA 1087
K+ALG+KWVYKIK+ SDG+IER KARLVV G+ Q EG+DYDETFAPVAKM TVR FL VA
Sbjct: 638 KRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVA 697
Query: 1088 AIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYGLKQAPRCWFA 1147
A + W VHQMDVHNAFLHGDL+EEVYMK+P GF+ DP+ VCRL KSLYGLKQAPRCWF+
Sbjct: 698 AARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFS 757
Query: 1148 KLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLGVCF 1207
KL +ALK+YGF QS SDYSLF+ + + ++VLVYVDDLII+G+ A+ FK+YL CF
Sbjct: 758 KLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDLIISGSCPDAVAQFKSYLESCF 817
Query: 1208 HMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAKPADFPMEQHHKLALVS 1267
HMKDLG+LKYFLG+EV+RN +G YL QRKY L+II E GLLGA+P+ FP+EQ+HKL+L +
Sbjct: 818 HMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLST 877
Query: 1268 GKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAALRVVRYLKKHP 1327
L D YRRL+GRLIYL+VTRP+L+YSVH L+QFMQ P ++HW AA+RVVRYLK +P
Sbjct: 878 SPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNP 937
Query: 1328 GQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAE 1387
GQGILL S S L++ GWCDSD+A+CPLTRRSLTG+ V L +P+SWKTKKQPT+SRSSAE
Sbjct: 938 GQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAE 997
Query: 1388 AEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFHERTKHIEADC 1447
AEYR+MA T EL WLK++L DLGVSH Q M+++ DSKSA+ ++ NPV HERTKH+E DC
Sbjct: 998 AEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDC 1057
Query: 1448 HFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLGIRDLHAP 1498
HF+RDA++ GII +VP+ QLADI TKALG+ + + LRKLGI D+HAP
Sbjct: 1058 HFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGILDVHAP 1108
Score = 468 bits (1205), Expect = e-130
Identities = 216/407 (53%), Positives = 295/407 (72%), Gaps = 1/407 (0%)
Query: 402 ASHHVTGNFSCLINGKRITNTPVGLPNGKDATAIQEGSVILDGGLRLNNVLFVPQLTCNL 461
ASHH+TGN L + ++ + L +G A+ EG+V L L L +V +V +L +L
Sbjct: 169 ASHHMTGNLELLSGMRSMSPVLIILADGNKRVAVSEGTVRLGSHLILKSVFYVKELESDL 228
Query: 462 ISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGERIDGLYFFRGVPKVHALMVEGDSA 521
ISV Q++D+++C+VQ + VIQDRTTR + G G+R +G + FRG+ A+ +
Sbjct: 229 ISVGQMMDENHCVVQLADHFLVIQDRTTRMVTGIGKRENGSFCFRGMENAAAVHTSVKAP 288
Query: 522 MDLWHKRLGHPSEKVLKFIPH-VSQHSRSKNNRPCDVCPRAKQHRDSFPLSENNAASLFE 580
DLWH+RLGH S+K++ +P + + CD C RAKQ RD+FPL +N + F+
Sbjct: 289 FDLWHRRLGHASDKIVNLLPRELLSSGKEILENVCDTCMRAKQTRDTFPLRDNRSMDSFQ 348
Query: 581 LVHCDLWGSYRTRSSCGAQYYLTIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQFDK 640
L+HCD+WG YRT S GA+Y+LTIV+DYSR VWVYL+ +K+E + +F+A V+RQFD
Sbjct: 349 LIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQFDT 408
Query: 641 KIKKVRSDNGTEFNCLRDYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARALRFQGH 700
+IK VRSDNGTEF C+R+YF + GI ETSCVGTP QNGRVERKH+HI+N+ARALRFQ +
Sbjct: 409 EIKTVRSDNGTEFLCMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSY 468
Query: 701 LPMQFWGECVLTACYLINRTPSSVLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDG 760
LP+QFWGEC+L+A YLINRTPS +L K+PYE L+ PK+ ++++FG LCYAHNQ G
Sbjct: 469 LPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKG 528
Query: 761 DKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYEHEFPF 807
DKFA+RSR+C+FVGYP+G+KGW+L+DLE +++ VSRDV F E EFP+
Sbjct: 529 DKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPY 575
Score = 115 bits (289), Expect = 8e-24
Identities = 55/150 (36%), Positives = 98/150 (64%), Gaps = 4/150 (2%)
Query: 21 KKVDLVFFLGSNDNPGNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPT--T 78
++ L + L + DN G VI+ L+ NY+EW+ +T+ ++++K+GF++G IP+P +
Sbjct: 15 RRTILPYDLTAADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGS 74
Query: 79 PEKLEDWKAVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKA 138
P+ LEDW + ++L++W+ TI+ L + +S+ D A LW +++RF V NG + ++KA
Sbjct: 75 PD-LEDWLTINALLVSWMKMTIDSELLTNISHRDVARDLWEQIRKRFSVSNGPKNQKMKA 133
Query: 139 SLGECKQGKGEEVSAYFGRLSRIWDELVTY 168
L CKQ +G V Y+G+L++IWD + +Y
Sbjct: 134 DLATCKQ-EGMTVEGYYGKLNKIWDNINSY 162
>UniRef100_Q9SJ99 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 668 bits (1724), Expect = 0.0
Identities = 345/620 (55%), Positives = 445/620 (71%), Gaps = 32/620 (5%)
Query: 906 EPEVVAEREAIVASEMGRGMRNKVPNIKLKDFVTH--TIRKVK------SSKSSSAQEDA 957
+P V + + A+ + R +++L+D+V + T+ + SS SS+
Sbjct: 547 QPLFVVDSPFVEATSPRQRKRQIRQSVRLQDYVLYNATVSPINPHALPDSSSQSSSMVQG 606
Query: 958 SGTPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNE 1017
+ + YP++ +VS + FS H+ F+AA+TA EP +FKEAV+ W DAM E+ ALE N+
Sbjct: 607 TSSLYPLSDYVSDDCFSAGHKAFLAAITANDEPKHFKEAVRIKVWNDAMFKEVDALEINK 666
Query: 1018 TWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKM 1077
TW + LPPGK A+GS+WVYK K+++DGSIER KARLVV G+ Q+EG DY+ETFAPV KM
Sbjct: 667 TWDIVDLPPGKVAIGSQWVYKTKYNADGSIERYKARLVVQGNKQVEGEDYNETFAPVVKM 726
Query: 1078 VTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYG 1137
TVRT L + A +WEV+QMDV+NAFLHGDL+EEVYMK+PPGF+++ P+ VCRL+KSLYG
Sbjct: 727 TTVRTLLRLVAANQWEVYQMDVNNAFLHGDLDEEVYMKLPPGFRHSHPDKVCRLRKSLYG 786
Query: 1138 LKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALK 1197
LKQAPRCWF KL AL R+GFVQ + DYS F+ R I++ VLVYVDDL+I GND L+
Sbjct: 787 LKQAPRCWFKKLSDALLRFGFVQGHEDYSFFSYTRNGIELRVLVYVDDLLICGNDGYMLQ 846
Query: 1198 IFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAKPADFPM 1257
FK YLG CF MKDLG LKYFLG+EV+R EGI+L QRKYAL+II ++G LG +PA P+
Sbjct: 847 KFKEYLGRCFSMKDLGKLKYFLGIEVSRGSEGIFLSQRKYALDIITDSGNLGCRPALTPL 906
Query: 1258 EQHHKLALVSGKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAAL 1317
EQ+H LA G L D +PYRRL+GRL+YL TRP+L+YSVH+LSQFMQ P E H AA+
Sbjct: 907 EQNHHLATDDGPLLADAKPYRRLVGRLLYLLHTRPELSYSVHVLSQFMQTPREAHLAAAM 966
Query: 1318 RVVRYLKKHPGQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKK 1377
R+VR+LK PGQGILL +D+EL+L+ +CDSD+ +CP TRRSL+ +VVLL SP+SWKTKK
Sbjct: 967 RIVRFLKGSPGQGILLNADTELQLDVYCDSDFQTCPKTRRSLSAYVVLLGGSPISWKTKK 1026
Query: 1378 QPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFH 1437
Q TVS SSAEAEYR+M++ E+KWL++LL +L NPVFH
Sbjct: 1027 QDTVSHSSAEAEYRAMSVALREIKWLRKLLKELA---------------------NPVFH 1065
Query: 1438 ERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLGIRDLHA 1497
ERTKHIE+DCH VRDAV GII +V T+ QLADIFTKALG++QF +L+ KLGI+DLH
Sbjct: 1066 ERTKHIESDCHSVRDAVRDGIITTHHVRTNEQLADIFTKALGRSQFLYLMSKLGIQDLHT 1125
Query: 1498 PEGGYWDYCDIIVIYFRLMW 1517
P G C + + L+W
Sbjct: 1126 PTNGRHICCQEMEL---LLW 1142
Score = 398 bits (1023), Expect = e-109
Identities = 196/372 (52%), Positives = 253/372 (67%), Gaps = 12/372 (3%)
Query: 486 DRTTRTLIGAGERIDGLYFFRGVP--KVHALMVEGDSAMDLWHKRLGHPSEKVLKFIPHV 543
DR +RTLIG+GE DG+Y+ V K+H V D A LWH+RLGHPS VL +P +
Sbjct: 52 DRFSRTLIGSGEERDGVYYLTDVATAKIHTAKVSSDQA--LWHQRLGHPSFSVLSSLPVL 109
Query: 544 SQHSRSKNNRPCDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYLT 603
+ S S +R CDVC RAKQ R+ FP+S N + F L+HCD+WG YR SSCGA Y+LT
Sbjct: 110 TSSSLSVGSRSCDVCFRAKQTREVFPVSTNKSIECFSLIHCDVWGPYRVPSSCGAVYFLT 169
Query: 604 IVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFNN 663
IV+D+SRAVW YLL K+E+ T+ NF+ + ++QF K +K +RSDNGTEF CL YF +
Sbjct: 170 IVDDFSRAVWTYLLLAKSEVRTVLTNFLVYTEKQFGKSVKVLRSDNGTEFMCLASYFREH 229
Query: 664 GIVFETSCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPSS 723
GIV +TSCVGTPQQNGRVERKH+HI+NVARA+ FQ LP+QFWGE VLTA YLINRTP+S
Sbjct: 230 GIVHQTSCVGTPQQNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLINRTPTS 289
Query: 724 VLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPYGKKGWK 783
+ N +PYE L P ++++++FG CY H RD DKF RSR C+F+GYP+ +KGWK
Sbjct: 290 LHNGLSPYEILHNSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQKGWK 349
Query: 784 LYDLESKEYIVSRDVKFYEHEFPFDVQLDTTHSTPFIDSEYVTED--IGFETYDASFEGG 841
++D+E KE++VSRDV F E FP+ +T H + V ED + T D
Sbjct: 350 VFDMEKKEFLVSRDVVFREDVFPY-AATNTDHVSASPAPLLVDEDWMVSTTTLDR----- 403
Query: 842 GASMALQDNEQT 853
G+S L N+ T
Sbjct: 404 GSSAVLSANKNT 415
>UniRef100_Q9T0C5 Retrotransposon like protein [Arabidopsis thaliana]
Length = 1515
Score = 648 bits (1671), Expect = 0.0
Identities = 449/1471 (30%), Positives = 714/1471 (48%), Gaps = 134/1471 (9%)
Query: 67 GFVEGKIPKPTTP--------------EKLEDWKAVQSMLIAWLLNTIEPSLRSTLSYYD 112
GFV G P+P + ++ W + ++ AW+ ++ + +
Sbjct: 40 GFVTGATPRPASTIIVTKDDIQSEEANQEFLKWTRIDQLVKAWIFGSLSEEALKVVIGLN 99
Query: 113 DAESLWTHLKQRFCVVNGARICQLKASLGECKQGKGEEVSAYFGRLSRIWDELVTYVKKP 172
A+ +W L +RF + R L+ LG C + G+ + AY + I D+L +
Sbjct: 100 SAQEVWLGLARRFNRFSTTRKYDLQKRLGTCSKA-GKTMDAYLSEVKNICDQLDS----- 153
Query: 173 TCKCEGCICDINKQVTDFSAEDYLHHFLMGLDGAY---ATIRSNLLSQDPLPNIDQAYQR 229
I VT+ ++ + L GL Y AT+ + L P P D
Sbjct: 154 ----------IGFPVTE---QEKIFGVLNGLGKEYESIATVIEHSLDVYPGPCFDDVVY- 199
Query: 230 VIQDERLRQGEYSIQQNRDNVMAFKVAPDTRGKSKLVDNSDKFCTHCNREGHDERTCFQI 289
KL DK T+ F
Sbjct: 200 ----------------------------------KLTTFDDKLSTYTANSEVTPHLAF-- 223
Query: 290 HGFPEWWGDRPRGGRGSGRGGATTGRDTTGRSGG-RGRGTYNALARANKATTSSRSIGGN 348
+ D+ RG+ GR G RGRG+Y++ R S S G+
Sbjct: 224 ------YTDKSYSSRGNNNSRG-------GRYGNFRGRGSYSSRGRGFHQQFGSGSNNGS 270
Query: 349 SGQSHAPPHSSEAAGISGI---TPAQWQQILDALNISKTKDRLHGKNDIS---WIIDTGA 402
S G S T + + + L + R+ +N S W+ D+ A
Sbjct: 271 GNGSKPTCQICRKYGHSAFKCYTRFEENYLPEDLPNAFAAMRVSDQNQASSHEWLPDSAA 330
Query: 403 SHHVTGNFSCLINGKRIT-NTPVGLPNGKDATAIQEGSVILD---GGLRLNNVLFVPQLT 458
+ H+T L N + + + V + NG G++ L+ G L L +VL P +T
Sbjct: 331 TAHITNTTDGLQNSQTYSGDDSVIVGNGDFLPITHIGTIPLNISQGTLPLEDVLVCPGIT 390
Query: 459 CNLISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGERIDGLYFFRGVP-KVHALMVE 517
+L+SV++L DD C F + VI+D+ T+ L+ G + GLY + VP + + +
Sbjct: 391 KSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQQLLTQGNKHKGLYVLKDVPFQTYYSTRQ 450
Query: 518 GDSAMDLWHKRLGHPSEKVLKFIPHVSQHSRSK-NNRPCDVCPRAKQHRDSFPLSENNAA 576
S ++WH+RLGHP+++VL+ + +K ++ C+ C K R F SE ++
Sbjct: 451 QSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSNMCEACQMGKVCRLPFVASEFVSS 510
Query: 577 SLFELVHCDLWGSYRTRSSCGAQYYLTIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDR 636
E +HCDLWG S+ G QYY+ +++YSR W Y L K++ ++F+ F V+
Sbjct: 511 RPLERIHCDLWGPAPVTSAQGFQYYVIFIDNYSRFTWFYPLKLKSDFFSVFVLFQQLVEN 570
Query: 637 QFDKKIKKVRSDNGTEFNCLR--DYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARA 694
Q+ KI + D G EF + + + GI SC TPQQNG ER+H+++ + +
Sbjct: 571 QYQHKIAMFQCDGGGEFVSYKFVAHLASCGIKQLISCPHTPQQNGIAERRHRYLTELGLS 630
Query: 695 LRFQGHLPMQFWGECVLTACYLINRTPSSVL-NYKTPYEKLFGKVPKFDNMKIFGCLCYA 753
L F +P + W E T+ +L N PSS L + K+PYE L G P + +++FG CY
Sbjct: 631 LMFHSKVPHKLWVEAFFTSNFLSNLLPSSTLSDNKSPYEMLHGTPPVYTALRVFGSACYP 690
Query: 754 HNQRRDGDKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYEHEFPFD---VQ 810
+ + +KF +S C+F+GY KG++ + + + R V F E +FP+ Q
Sbjct: 691 YLRPYAKNKFDPKSLLCVFLGYNNKYKGYRCLHPPTGKVYICRHVLFDERKFPYSDIYSQ 750
Query: 811 LDTTHSTPFIDSEYVTEDIGFETYDASFEGGGASMALQDNEQTQLQGGLHGDC--NGADV 868
T +P + GF + S E ++ + + C N A+
Sbjct: 751 FQTISGSPL----FTAWQKGFSSTALSRETPSTNVEDIIFPSATVSSSVPTGCAPNIAET 806
Query: 869 AANEGLSVSGIEGEVEPAHEVDGADVVVMQEDDVEPGEPEVVAEREAIVASEMGRGMRNK 928
A + V+ V P + + E+ + + E ++S M
Sbjct: 807 ATAPDVDVAAAHDMVVPPSPITSTSLPTQPEESTS-DQNHYSTDSETAISSAM------T 859
Query: 929 VPNIKLKDFVTHTIRKVKSSKSSSAQEDASGTPYPITYFVSCERFSIRHRNFVAAVTAGK 988
+I + F ++S SS+ A T +P+ ++ + I N A+ + K
Sbjct: 860 PQSINVSLFEDSDFPPLQSVISSTTA--APETSHPM---ITRAKSGITKPNPKYALFSVK 914
Query: 989 ----EPNNFKEAVKDSGWRDAMRNEIQALEDNETWVMEKLPPGKKALGSKWVYKIKHHSD 1044
EP + KEA+KD GW +AM E+ + + +TW + + LG KWV+K K +SD
Sbjct: 915 SNYPEPKSVKEALKDEGWTNAMGEEMGTMHETDTWDLVPPEMVDRLLGCKWVFKTKLNSD 974
Query: 1045 GSIERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVAAIKKWEVHQMDVHNAFL 1104
GS++RLKARLV G+ Q EG+DY ET++PV + TVR+ L VA I KW + Q+DV NAFL
Sbjct: 975 GSLDRLKARLVARGYEQEEGVDYVETYSPVVRSATVRSILHVATINKWSLKQLDVKNAFL 1034
Query: 1105 HGDLEEEVYMKVPPGFKN-TDPNLVCRLKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYS 1163
H +L+E V+M PPGF++ + P+ VC+LKK++Y LKQAPR WF K + L +YGF+ S+S
Sbjct: 1035 HDELKETVFMTQPPGFEDPSRPDYVCKLKKAIYDLKQAPRAWFDKFSSYLLKYGFICSFS 1094
Query: 1164 DYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEV 1223
D SLF +G + +L+YVDD+I+ GN+ L+ L F MKD+G L YFLG++
Sbjct: 1095 DPSLFVYLKGRDVMFLLLYVDDMILTGNNDVLLQQLLNILSTEFRMKDMGALHYFLGIQA 1154
Query: 1224 ARNHEGIYLCQRKYALEIIDETGLLGAKPADFPMEQHHKLALVSG--KPLEDPEPYRRLI 1281
+++G++L Q KY +++ G+ P++ L L+ G KP +P +RRL
Sbjct: 1155 HYHNDGLFLSQEKYTSDLLVNAGMSDCSSMPTPLQ----LDLLQGNNKPFPEPTYFRRLA 1210
Query: 1282 GRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAALRVVRYLKKHPGQGILLRSDSELKL 1341
G+L YL++TRPD+ ++V+ + Q M P + R++ YLK GI L S+++ L
Sbjct: 1211 GKLQYLTLTRPDIQFAVNFVCQKMHAPTMSDFHLLKRILHYLKGTMTMGINLSSNTDSVL 1270
Query: 1342 EGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAEAEYRSMAMTTCELK 1401
+ DSDWA C TRRS G+ L + +SW K+ PTVS+SS EAEYR+++ E+
Sbjct: 1271 RCYSDSDWAGCKDTRRSTGGFCTFLGYNIISWSAKRHPTVSKSSTEAEYRTLSFAASEVS 1330
Query: 1402 WLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFHERTKHIEADCHFVRDAVVAGIICP 1461
W+ LL ++G+ Q ++YCD+ SA++++ NP H R+KH + D ++VR+ V G +
Sbjct: 1331 WIGFLLQEIGLPQQQIPEMYCDNLSAVYLSANPALHSRSKHFQVDYYYVRERVALGALTV 1390
Query: 1462 LYVPTSVQLADIFTKALGKAQFEFLLRKLGI 1492
++P S QLADIFTK+L +A F L KLG+
Sbjct: 1391 KHIPASQQLADIFTKSLPQAPFCDLRFKLGV 1421
>UniRef100_Q851Y3 Putative polyprotein [Oryza sativa]
Length = 1299
Score = 625 bits (1613), Expect = e-177
Identities = 356/872 (40%), Positives = 512/872 (57%), Gaps = 28/872 (3%)
Query: 639 DKKIKKVRSDNGTEF--NCLRDYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARALR 696
+++ K +R+DNG E+ N + + GI+ +TSC TP QNG ERK++H++ AR+L
Sbjct: 443 EEEAKFIRTDNGGEYINNEFSSFLSSEGILHQTSCPDTPPQNGVAERKNRHLLETARSLM 502
Query: 697 FQGHLPMQFWGECVLTACYLINRTPSSVLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQ 756
+ ++P W E V+TA YLINRTPS +L KTP E +FGK K+FGC C+ +
Sbjct: 503 YAMNVPKFLWSEAVMTATYLINRTPSRILGMKTPCEMIFGKNEFVVPPKVFGCTCFVRDH 562
Query: 757 RRDGDKFASRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYEHEFPFDVQLDTTHS 816
R K R+ KCIFVGY G+KG+K + + VS DV F E PF + T S
Sbjct: 563 RPSIGKLDPRAVKCIFVGYSSGQKGYKCWSPSERRTFVSMDVTFRE-SVPFYGE-KTDLS 620
Query: 817 TPFIDSEYVTEDIGFETYDASFEGGGASMALQDNEQTQLQGGLHGDCNGADVAANEGLSV 876
+ FID + T G + + E G Q ++ + G + G
Sbjct: 621 SLFIDLDDSTS--GHDGHQMKDEILGPKGDEQPKKEKLVVGSIPCPMGGPVAQ------- 671
Query: 877 SGIEGEVEPAHEVDGADV--------VVMQEDDVEPGEPEVVAEREAIVASEMGRGMRNK 928
E E HE V V+ Q ++ E +V E+ ++ + +R +
Sbjct: 672 ---EQEWRKPHEEKNLQVYTRRTRCPVIQQVEEDNQVEEDVSREQGSLESGGEEEEVREE 728
Query: 929 VP-NIKLKDFVTHTIRKVKSSKSSSAQEDASGTPYPITYFVSCERFSIRHRNFVAAVTAG 987
I ++ V K AQ D I+ +VS + S ++ F+A++ +
Sbjct: 729 SDLPIAIRKSVRSNAGKPPLRYGFEAQ-DEGDDENNISNYVSYDSLSSTYKAFIASLDSV 787
Query: 988 KEPNNFKEAVKDSGWRDAMRNEIQALEDNETWVMEKLPPGKKALGSKWVYKIKHHSDGSI 1047
+ P +++EA +D W AM +E++ALE N+TW + P GKK + KWVY +K + DG +
Sbjct: 788 QIPKDWREAKQDPRWHQAMLDELEALEKNKTWDLVPFPKGKKIVNCKWVYTVKQNPDGKV 847
Query: 1048 ERLKARLVVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVAAIKKWEVHQMDVHNAFLHGD 1107
ER KARLV G+ Q GIDYDETFAPVAKM TVRT ++ AA W +HQ+DV NAFLH D
Sbjct: 848 ERYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLHQLDVKNAFLHRD 907
Query: 1108 LEEEVYMKVPPGFKNTD-PNLVCRLKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYS 1166
L+EEVYM VPPGF + V RLKKSLYGLKQ+PR WF + A+ + Q D++
Sbjct: 908 LQEEVYMDVPPGFATSQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMCAMDYKQCNGDHT 967
Query: 1167 LFTLHRGEIQINVLVYVDDLIIAGNDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARN 1226
+F H G+ + VYVDD+II GND + K L F +KDLG L+YFLG+E+AR+
Sbjct: 968 VFYHHSGDHITILAVYVDDMIITGNDCLEITRLKRNLSKEFEVKDLGQLRYFLGIEIARS 1027
Query: 1227 HEGIYLCQRKYALEIIDETGLLGAKPADFPMEQHHKLALVSGKPLEDPEPYRRLIGRLIY 1286
GI + QRKY L+++ ETG+LG P P++Q+HKL SG P+ + E Y+RL+GRLIY
Sbjct: 1028 PRGIVISQRKYVLDLLSETGMLGCCPVSTPIDQNHKLCAESGDPV-NRERYQRLVGRLIY 1086
Query: 1287 LSVTRPDLAYSVHILSQFMQKPCEEHWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCD 1346
L TRPD+ Y+V ++S++M P H EA R++RYLK PG+G+ + + LK+EG+CD
Sbjct: 1087 LCHTRPDITYAVSMVSRYMHDPRSSHMEAVYRILRYLKGSPGKGLWFKKNGHLKIEGYCD 1146
Query: 1347 SDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQL 1406
+DWASC RRS +G+ V + + VSW++KKQ VSRS+AEAEYR+MA + EL WL+ L
Sbjct: 1147 ADWASCLDDRRSTSGYCVYVGGNLVSWRSKKQSVVSRSTAEAEYRAMAASLSELLWLRNL 1206
Query: 1407 LGDLGVSHSQGMQLYCDSKSALHIAQNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPT 1466
L +L + + M+L CD+KSA++IA NPV H+RTKH+E D F+++ + G++ +V +
Sbjct: 1207 LVELKILGNTPMKLLCDNKSAINIANNPVQHDRTKHVEIDRFFIKEKLDEGVLELGFVTS 1266
Query: 1467 SVQLADIFTKALGKAQFEFLLRKLGIRDLHAP 1498
Q+AD TK LG + K+G+ D++ P
Sbjct: 1267 GGQVADCLTKGLGVKECNCSCDKMGMIDIYHP 1298
Score = 109 bits (272), Expect = 7e-22
Identities = 115/472 (24%), Positives = 182/472 (38%), Gaps = 106/472 (22%)
Query: 42 IQLRGL-NYDEWSRAIRTSFQAKRKYGFVEGKIPKPTTPEKLE--DWKAVQSMLIAWLLN 98
I+L G+ NY WSR + K G+V G+I +P +E W S+++AWLL
Sbjct: 49 IKLEGVKNYLSWSRRALLILKTKGLEGYVTGEIKEPENISSVEWKTWSTTNSLVVAWLLT 108
Query: 99 TIEPSLRSTLSYYDDAESLWTHLKQRFC-VVNGARICQLKASLGECKQGKGEEVSAYFGR 157
++ P++ +T+ A +W L + N + + + + +QG+ V+ Y
Sbjct: 109 SLIPAIATTVETISSASEMWKTLTNLYSGEGNVMLMVEAQEKISVLRQGE-RSVAEYVAE 167
Query: 158 LSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGLDGAYATIRSNLLSQ 217
L +W +L Y + CI + K + + FL GL+ + R + Q
Sbjct: 168 LKHLWSDLDHY-DPLGLEHPDCIAKMRKWI----ERRRVIEFLKGLNSEFEGRRDAMFHQ 222
Query: 218 DPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAFKVAPDTRGKSKLVDNS--DKFCTH 275
LP++D+A + Q+E ++ + P + + +V S + C +
Sbjct: 223 TTLPSLDEAIAAMAQEELKKK------------VLPSATPSSPSPTYVVAQSKETRECFN 270
Query: 276 CNREGHDERTCFQIHGFPEWWGDRPRGGRG--SGRGGATTGRDTTGRSGGRGRG-TYNAL 332
C GH + + P +P GRG RGGA GR GR G RGRG Y +
Sbjct: 271 CGEMGH----LIRDYRAPR----KPSYGRGRFGDRGGARGGRGYAGR-GNRGRGYEYRSD 321
Query: 333 ARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQQILDALNISKTKDRLHGKN 392
RAN T G + HSS Q ++N S +
Sbjct: 322 HRANVVTLEESCSGSTNVDVANLVHSSSGNS---------NQAFMSINSSHS-------- 364
Query: 393 DISWIIDTGASHHVTGNFSCLINGKRITNTPVGLPNGKDATAIQEGSVILDGGLRLNNVL 452
+WI+D+GAS HVT N
Sbjct: 365 --NWILDSGASRHVTVN------------------------------------------- 379
Query: 453 FVPQLTCNLISVTQLIDDSNCIVQFTNALCVIQDRTTRTLIGAGERIDGLYF 504
L+S++ L+D NC V C+IQ+R T +G G R DGL++
Sbjct: 380 --------LVSISSLVDHMNCRVSLDRENCLIQERETGKKLGIGVRRDGLWY 423
>UniRef100_Q9ZVE4 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1102
Score = 621 bits (1601), Expect = e-176
Identities = 332/599 (55%), Positives = 403/599 (66%), Gaps = 48/599 (8%)
Query: 900 DDVEPGEPEVVAEREAIVASEMGRGMRNKVPNIKLKDFVTHTIRKVKSSKSSSAQEDASG 959
D PG PE+ +G+G R K P + LKD+V H KV SS +S+ +
Sbjct: 551 DSSSPGLPEL-----------LGKGHRPKHPPVYLKDYVAH---KVHSSPHTSSPGLSDS 596
Query: 960 TPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAVKDSGWRDAMRNEIQALEDNETW 1019
P S H F+AA+ E N+FK+ V W DAM+ EI+ALE N TW
Sbjct: 597 NVSPTV--------SANHIAFMAAILDSNEQNHFKDDVLIKEWCDAMQKEIEALEANHTW 648
Query: 1020 VMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVFGHHQIEGIDYDETFAPVAKMVT 1079
+ LP GKKA+ SKWVYK+K +SDG++ER KARLVV G+HQ EGID+ ETFAPVAKM T
Sbjct: 649 DVTDLPHGKKAISSKWVYKLKFNSDGTLERHKARLVVMGNHQKEGIDFKETFAPVAKMTT 708
Query: 1080 VRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVPPGFKNTDPNLVCRLKKSLYGLK 1139
VR LAVAA K W+V QMDVHNAFLHGDLE+E SLYGLK
Sbjct: 709 VRLLLAVAAAKDWDVFQMDVHNAFLHGDLEQE----------------------SLYGLK 746
Query: 1140 QAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQINVLVYVDDLIIAGNDIAALKIF 1199
QAPRCWFAKL TAL++ GF QSY DYSLF+L+R I+ LVYVDD II GN++ A+ F
Sbjct: 747 QAPRCWFAKLSTALRKLGFTQSYEDYSLFSLNRDGTVIHFLVYVDDFIIVGNNLKAIDHF 806
Query: 1200 KAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRKYALEIIDETGLLGAKPADFPMEQ 1259
K +L CFHMKDLG LKYFLGLEV+R +G L Q+KYAL+II+E GLLG KP+ PME
Sbjct: 807 KEHLHKCFHMKDLGKLKYFLGLEVSRGADGFCLSQQKYALDIINEAGLLGYKPSAVPMEL 866
Query: 1260 HHKLALVSGKPLEDPEPYRRLIGRLIYLSVTRPDLAYSVHILSQFMQKPCEEHWEAALRV 1319
HHKL +S ++P YRRL+ R IYL++TRPDL+Y+VHILSQFMQ P E HW A LR+
Sbjct: 867 HHKLGSISSPVFDNPAQYRRLVDRFIYLTITRPDLSYAVHILSQFMQTPLEAHWHATLRL 926
Query: 1320 VRYLKKHPGQGILLRSDSELKLEGWCDSDWASCPLTRRSLTGWVVLLDLSPVSWKTKKQP 1379
VRYLK P QGILLRSD L L +CDSD+ CP TRRSL+ +V+ L +P+SWKTKKQ
Sbjct: 927 VRYLKGSPDQGILLRSDRALSLTAYCDSDYNPCPRTRRSLSAYVLYLGDTPISWKTKKQD 986
Query: 1380 TVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVSHSQGMQLYCDSKSALHIAQNPVFHER 1439
TVS SSAEAEYR+MA T E+KWLK L+ LGV H+Q + L+CDS++A+HIA NPVFHER
Sbjct: 987 TVSSSSAEAEYRAMAYTLKEIKWLKALMTTLGVDHTQPILLFCDSQAAIHIAANPVFHER 1046
Query: 1440 TKHIEADCHFVRDAVVAGIICPLYVPTSVQLADIFTKALGKAQFEFLLRKLGIRDLHAP 1498
TKHIE DCH VRDAV +I ++ T+ D+ TKAL + FE LL LG + P
Sbjct: 1047 TKHIEKDCHQVRDAVTDKVISTPHISTT----DLLTKALPRPTFERLLSTLGTCNYDLP 1101
Score = 318 bits (816), Expect = 6e-85
Identities = 216/595 (36%), Positives = 289/595 (48%), Gaps = 128/595 (21%)
Query: 199 FLMGLD-GAYATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAFKVAP 257
FL LD +A IRS + +DPLP+ ++ Y RVI+ ++ S + + F V
Sbjct: 6 FLFELDLPRFAPIRSKITDEDPLPSHNRVYSRVIRGQQNLDVARSKETTNSEAINFSVKT 65
Query: 258 DTRGKSKLV---DNSDKFCTHCNREGHDERTCFQIHGFPEWWGDRPRGGRGSGRGGATTG 314
+ + V D+ CTHC+R+GHD CF +HGFPEW+ ++ G R S
Sbjct: 66 PSAPQVAAVYAPKPRDRSCTHCHRQGHDVTDCFLVHGFPEWYYEQKGGSRVSSDNREVVS 125
Query: 315 R---------DTTGRSGGRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGIS 365
R + + GRGRG N+ + AP SS G
Sbjct: 126 RLENKPAKREGRSSKGNGRGRGRVNS--------------------ARAPLSSSN--GSD 163
Query: 366 GITPAQWQQILDALNISKTKDRLHGKNDIS-WIIDTGASHHVTGNFSCLINGKRITNTPV 424
IT Q +L A T +RL G ++ IID+GASHH+TG+ S L++ I + V
Sbjct: 164 QIT--QLISLLQAQRPKSTSERLSGNTCLTDVIIDSGASHHMTGDCSILVDVFDIIPSAV 221
Query: 425 GLPNGKDATAIQEGSVILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNALCVI 484
P+GK + A + +++L +L +VLFVP C LISV++L+ +
Sbjct: 222 TKPDGKASCATKCVTLLLSSSYKLQDVLFVPDFDCTLISVSKLLKQTGPF---------- 271
Query: 485 QDRTTRTLIGAGERIDGLYFFRGVPKVHALMVEGDSAMD--LWHKRLGHPSEKVLKFIPH 542
+RTLIGAGE + +Y+F GV A DS LWH+RLGHPS L +P
Sbjct: 272 ----SRTLIGAGEVRERVYYFTGVLVASAHKTSSDSTSSGALWHRRLGHPSTSFLLSLPE 327
Query: 543 VSQHSRSKNNRPCDVCPRAKQHRDSFPLSENNAASLFELVHCDLWGSYRTRSSCGAQYYL 602
Q S+ L ++ CD +C
Sbjct: 328 CHQSSKD----------------------------LGKIDSCD---------TC------ 344
Query: 603 TIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEFNCLRDYFFN 662
SRA K + ++ NF A DRQF K ++ +RSDNGTEF C YF
Sbjct: 345 ------SRA--------KQTLPSLIRNFCAMADRQFRKPVRSIRSDNGTEFMCHTSYFQE 390
Query: 663 NGIVFETSCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLINRTPS 722
+GI+ ETSCV TPQQN RVERKH+HI+NVAR FQG+ P TPS
Sbjct: 391 HGILHETSCVDTPQQNARVERKHRHILNVARTCLFQGNFP-----------------TPS 433
Query: 723 SVLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYPY 777
VL KTPYE LFGK P +D ++ FGCLCYAH + RD DKFASRSRKCIF+GYP+
Sbjct: 434 PVLKGKTPYEVLFGKQPSYDMLRTFGCLCYAHIRPRDKDKFASRSRKCIFIGYPH 488
>UniRef100_Q6F356 Putative polyprotein [Oryza sativa]
Length = 1256
Score = 577 bits (1488), Expect = e-163
Identities = 332/910 (36%), Positives = 491/910 (53%), Gaps = 24/910 (2%)
Query: 585 DLWGSYRTRSSCGAQYYLTIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKK 644
D+WG G +YY++ ++ +SR W+Y L K+E+ F F V+R F++KI
Sbjct: 350 DVWGPAPVAGG-GKKYYVSFIDAFSRFTWIYFLKYKSEVFQKFQEFQCLVERMFNRKIIS 408
Query: 645 VRSDNGTEFNCLRDYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQ 704
+++D G E+ L +F GI SC T QQNG ERKH+HI+ V +L LP++
Sbjct: 409 MQTDWGGEYQKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLK 468
Query: 705 FWGECVLTACYLINRTPSSVLNYKTPYEKLFGKVPKFDNMKIFGCLCYAHNQRRDGDKFA 764
FW E + YLINR P+ VL Y +P E LF + P + ++ FGC C+ + + K
Sbjct: 469 FWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQALRTFGCACWPDLRPYNSHKMH 528
Query: 765 SRSRKCIFVGYPYGKKGWKLYDLESKEYIVSRDVKFYEHEFPFDVQLDTTHSTPF----- 819
RS++C F+GY KG++ D + +SRDV F E FPF +L+ T
Sbjct: 529 FRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVVFDESVFPF-AELNPNAGTNLRKEVN 587
Query: 820 -IDSEYVTE-DIGFETYDASFEGGGASMALQDNEQTQLQGGLHGDCNGADVAANEGLSVS 877
+ ++ + D+ + + A+M +N + L + D AA+ G S +
Sbjct: 588 LLPADMLNPGDVQLNDHVNYYPTAPANMVAAENPVENTEENL---ASTRDDAADSGGSDT 644
Query: 878 GIEGEVEPAHEVDGADVVVMQEDDVEPGEPEVVAEREAIVASEMGRGMRNKVPNIKLKDF 937
G +PA + G +D E + A S + +PN +
Sbjct: 645 GTISNADPADDAAGDMTANPNLNDSSTHESSISASASPASQSSVATAPEATLPNPQ---- 700
Query: 938 VTHTIRKVKSSKSSSAQEDASGTPYPITYFVSCERFSIRHRNFVAAVTAGKEPNNFKEAV 997
+ ++ +SS+ + +AS + + E+ +T EP + +A+
Sbjct: 701 -----QHQQALRSSTPEGEASRPVTHLQKGIRKEKIYTDRTVKYGCLTTTGEPRDLHDAL 755
Query: 998 KDSGWRDAMRNEIQALEDNETWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARLVVF 1057
D+ W+ AM + AL N+TW + G+ + KWVYKIK DGS++R KARLV
Sbjct: 756 HDTNWKHAMDAKFTALLHNKTWHLVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAK 815
Query: 1058 GHHQIEGIDYDETFAPVAKMVTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYMKVP 1117
G Q GIDY++TF+PV K T+R L++A + W + Q+DV NAFLHG LEEEVYMK P
Sbjct: 816 GFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQP 875
Query: 1118 PGFKN-TDPNLVCRLKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHRGEIQ 1176
PG+++ P+ VC+L K+LYGLKQAPR W+AKL L+ GF S +D SLF ++G +
Sbjct: 876 PGYEDKVHPDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLI 935
Query: 1177 INVLVYVDDLIIAGNDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIYLCQRK 1236
I VLVYVDD+I+A + A+ L F +KDLG L YFLG+EV + GI L Q K
Sbjct: 936 IFVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEK 995
Query: 1237 YALEIIDETGLLGAKPADFPMEQHHKLALVSGKPL--EDPEPYRRLIGRLIYLSVTRPDL 1294
Y +++ G+ KP P+ KL L G L D YR ++G L YL++TRPD+
Sbjct: 996 YVTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDI 1055
Query: 1295 AYSVHILSQFMQKPCEEHWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCDSDWASCPL 1354
+ V+ + QF+ P HW A R++RYLK+ G+ + + + G+ D+DWA
Sbjct: 1056 YFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNID 1115
Query: 1355 TRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLGVSH 1414
RRS G+ V L + VSW KKQ TV RSS E+EY+++A T E+ W++ LL +L V
Sbjct: 1116 DRRSTGGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPS 1175
Query: 1415 SQGMQLYCDSKSALHIAQNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLADIF 1474
+L+CD+ A +++ NPVFH RTKHIE D HFVR+ + ++ ++PT Q+AD F
Sbjct: 1176 PPMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERMQRKLLEVEFIPTGDQVADGF 1235
Query: 1475 TKALGKAQFE 1484
TKAL Q E
Sbjct: 1236 TKALSARQLE 1245
Score = 52.4 bits (124), Expect = 1e-04
Identities = 86/413 (20%), Positives = 140/413 (33%), Gaps = 93/413 (22%)
Query: 36 GNVITPIQLRGLNYDEWSRAIRTSFQAKRKYGFVEGKIPKPTTP------EK-------- 81
G + +L NY W + + R ++ G KP+ EK
Sbjct: 14 GGITVTEKLSKGNYLIWKVQVLAVIRGARLDSYLTGATKKPSATIIIKKNEKEVEVSNPA 73
Query: 82 LEDWKAVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNGARICQLKASLG 141
+++W A ++ +LL T+ + S ++ A SLW+ ++ F AR K +L
Sbjct: 74 VDEWIANDQQVLGYLLTTMSRDVLSQVATCSSAASLWSTIEGMFSSATRARSINTKIALT 133
Query: 142 ECKQGKGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLM 201
K+G ++ Y ++ + DEL T K ED + + +
Sbjct: 134 NTKKG-DLGIAEYVSKMRVLADELATSGK------------------PVDEEDLISYIIA 174
Query: 202 GLDGAYATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVMAFKVAPDTRG 261
GLD + I S+L+S+ ++ +AY +++ E+ + N N RG
Sbjct: 175 GLDEDFEPIISSLVSKSEHVSLGEAYSQLLSFEQRMKMRQEHSANLAN----------RG 224
Query: 262 KSKLVDNSDKFCTHCNREGHDERTCFQIHGFPEWWGDRPRGGRGSGRGGATTGRDTTGRS 321
R RG G GR + G
Sbjct: 225 -------------------------------------RGRGNPGRGRNNKQPQQQQRGHG 247
Query: 322 G-GRGRGTYNALARANKATTSSRSIGGNSGQSHAPPHSSEAAGISGITPAQWQQILDALN 380
G RGRG + S++ GGN G + P + ++ D +
Sbjct: 248 GNSRGRG---------RGNNSNQRQGGN-GVDYRPKCQLCYKRGHTVIDCWYRYDEDFVP 297
Query: 381 ISKTKDRLHGKN-DISWIIDTGASHHVTGNFSCL-INGKRITNTPVGLPNGKD 431
K D +W +DTG + HVTG L I K V NG D
Sbjct: 298 DEKYAGTTASYGVDSNWYVDTGTTDHVTGELEKLTIRDKYKGQDQVQTANGAD 350
>UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum]
Length = 1358
Score = 554 bits (1427), Expect = e-156
Identities = 265/507 (52%), Positives = 365/507 (71%), Gaps = 3/507 (0%)
Query: 995 EAVKDSGWRDAMRNEIQALEDNETWVMEKLPPGKKALGSKWVYKIKHHSDGSIERLKARL 1054
EA+ SGWR AM +E+ AL + TW + LP GK +G +WVY +K DG ++RLKARL
Sbjct: 851 EALSHSGWRQAMVDEMSALHKSGTWELVSLPAGKSTVGCRWVYAVKIGPDGQVDRLKARL 910
Query: 1055 VVFGHHQIEGIDYDETFAPVAKMVTVRTFLAVAAIKKWEVHQMDVHNAFLHGDLEEEVYM 1114
V G+ QI G+DY +TFAPVAK+ +VR FL++AA++ W +HQ+D+ NAFLHGDLEEEVYM
Sbjct: 911 VAKGYTQIFGLDYSDTFAPVAKIASVRLFLSMAAVRHWPLHQLDIKNAFLHGDLEEEVYM 970
Query: 1115 KVPPGF--KNTDPNLVCRLKKSLYGLKQAPRCWFAKLVTALKRYGFVQSYSDYSLFTLHR 1172
+ PPGF + +LVCRL++SLYGLKQ+PR WF K T ++ +G +S +D+S+F H
Sbjct: 971 EQPPGFVAQGESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFYRHS 1030
Query: 1173 GEIQ-INVLVYVDDLIIAGNDIAALKIFKAYLGVCFHMKDLGVLKYFLGLEVARNHEGIY 1231
+ I ++VYVDD++I GND + K +L F KDLG LKYFLG+EVA++ GI
Sbjct: 1031 APSRCIYLVVYVDDIVITGNDQDGITDLKQHLFKHFQTKDLGRLKYFLGIEVAQSRSGIV 1090
Query: 1232 LCQRKYALEIIDETGLLGAKPADFPMEQHHKLALVSGKPLEDPEPYRRLIGRLIYLSVTR 1291
+ QRKYAL+I++ETG++G +P D PM+ + KL G+PL +PE YRRL+G+L YL+VTR
Sbjct: 1091 ISQRKYALDILEETGMMGCRPVDTPMDPNVKLLPGQGEPLSNPERYRRLVGKLNYLTVTR 1150
Query: 1292 PDLAYSVHILSQFMQKPCEEHWEAALRVVRYLKKHPGQGILLRSDSELKLEGWCDSDWAS 1351
PD+++ V ++SQFM PC+ HWEA +R++RY+K PG+G+L + G+ D+DWA
Sbjct: 1151 PDISFPVSVVSQFMTSPCDSHWEAVVRILRYIKSAPGKGLLFEDQGHEHIIGYTDADWAG 1210
Query: 1352 CPLTRRSLTGWVVLLDLSPVSWKTKKQPTVSRSSAEAEYRSMAMTTCELKWLKQLLGDLG 1411
P RRS +G+ VL+ + VSWK+KKQ V+RSSAE+EYR+MA TCEL W+KQLLG+L
Sbjct: 1211 SPSDRRSTSGYCVLVGGNLVSWKSKKQNVVARSSAESEYRAMATATCELVWIKQLLGELK 1270
Query: 1412 VSHSQGMQLYCDSKSALHIAQNPVFHERTKHIEADCHFVRDAVVAGIICPLYVPTSVQLA 1471
M+L CD+++ALHIA NPVFHERTKHIE DCHFVR+ +++G I +V ++ QLA
Sbjct: 1271 FGKVDKMELVCDNQAALHIASNPVFHERTKHIEIDCHFVREKILSGDIVTKFVKSNDQLA 1330
Query: 1472 DIFTKALGKAQFEFLLRKLGIRDLHAP 1498
DIFTK+L + ++ KLG DL+AP
Sbjct: 1331 DIFTKSLTCPRINYICNKLGTYDLYAP 1357
Score = 287 bits (735), Expect = 2e-75
Identities = 205/748 (27%), Positives = 357/748 (47%), Gaps = 72/748 (9%)
Query: 85 WKAVQSMLIAWLLNTIEPSLRSTLSYYDDAESLWTHLKQRFCVVNG-ARICQLKASLGEC 143
W+ V + L + L +I+ L + ++W K R N +R + + L
Sbjct: 65 WEKVDAQLCSLLWRSIDFKLMPLFRPFQTCYTVWE--KARALYTNDISRFYDVISRLTNL 122
Query: 144 KQGKGEEVSAYFGRLSRIWDELVTYVKKPTCKCEGCICDINKQVTDFSAEDYLHHFLMGL 203
K+ + + +S Y G++ + +E T + T ++ KQ + +L L GL
Sbjct: 123 KKQESD-MSTYLGQVQAVMEEFDTLMPVTT--------NVEKQ-QEHRQTLFLVLTLAGL 172
Query: 204 DGAYATIRSNLLSQDPLPNIDQAYQRVIQDERLRQGEYSIQQNRDNVM---------AFK 254
+ ++R +L+ +P ID+ + R+++ + D+ + ++
Sbjct: 173 PPDHDSVRDQILASPTVPTIDELFSRLLRLAAPPSHKVVSSPTVDSSILASQTFEKRTYQ 232
Query: 255 VAPDTRGKSKLVDNSDKFCTHCNREGHDERTCFQIHGFPEWWGDRPRGGRGSGRGGATTG 314
+ RG + K C+HC++ GH C+ +H G
Sbjct: 233 SMENRRGGGRFGKPRSK-CSHCHKPGHTRDICYILH-------------------GPPPS 272
Query: 315 RDTTGRSGGRGRGTYNALAR--ANKATTSSRSIGGNSGQSHAPPHSSEAAGISGIT-PAQ 371
D YN R A+K T+ + G Q H ++ + A
Sbjct: 273 YDPIVLK------EYNEFLRNRASKQTSPPVAYGAQPNQPSNNAHIAQTEYDEFLQYRAN 326
Query: 372 WQQILDALNISKTKDRLHGKNDI---------SWIIDTGASHHVTGNFSCLINGKRITNT 422
Q +++++ + G + +W++D+GAS H++GN S L + +
Sbjct: 327 KQTSPQVVSVAQPDVSVAGNSFACVSQSSTLGTWVMDSGASDHISGNKSLLSDIVYSQSL 386
Query: 423 P-VGLPNGKDATAIQEGSVILDGGLRLNNVLFVPQLTCNLISVTQLIDDSNCIVQFTNAL 481
P + L NG G + L++VL+VP NL SV++L +C + F +
Sbjct: 387 PAITLANGIQTKPKGVGKAKPLSSVTLDSVLYVPGSPFNLASVSRLTKALHCSITFFDDF 446
Query: 482 CVIQDRTTRTLIGAGERIDGLYFFRGVPKVHALMVEGDSAMDLWHKRLGHPS-EKVLKFI 540
++QDR+T +IG G GLY+ + A + + DL HKRLGH S K+ K +
Sbjct: 447 FLMQDRSTGQMIGTGHESQGLYYLTSSNSLAACSIT--DSPDLIHKRLGHSSLSKLQKMV 504
Query: 541 PHVSQHSRSKNNRPCDVCPRAKQHRDSFPLS-ENNAASLFELVHCDLWGSYRTRSSCGAQ 599
P +S S + C+ C K R +F S E + S+F LVH D+WG R S+ G +
Sbjct: 505 PSLS----SLSTLDCESCQLGKHTRATFSRSTEGRSESIFSLVHSDIWGPSRVSSTLGFR 560
Query: 600 YYLTIVNDYSRAVWVYLLCNKTEIETMFLNFVAFVDRQFDKKIKKVRSDNGTEF--NCLR 657
Y+++ ++DYS+ WV+L+ +++E+ ++F +F A + QF I+ RSDN E+ + R
Sbjct: 561 YFVSFIDDYSKCTWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFR 620
Query: 658 DYFFNNGIVFETSCVGTPQQNGRVERKHQHIMNVARALRFQGHLPMQFWGECVLTACYLI 717
++ + GI+ +T+C TPQQNG ERK++H++ AR L + ++P++FWG+ VLT+CYLI
Sbjct: 621 EFMTHQGIIHQTTCPYTPQQNGVAERKNRHLIETARTLLLESNVPLRFWGDAVLTSCYLI 680
Query: 718 NRTPSSVLNYKTPYEKLFGKVPKFD-NMKIFGCLCYAHNQRRDGDKFASRSRKCIFVGYP 776
NR PSS + + P+ LF + + ++FG C+ HN DK A R+ KC+F+GY
Sbjct: 681 NRMPSSSIQNQVPHSILFPQSHLYPIPPRVFGSTCFVHNLAPGKDKLAPRALKCVFLGYS 740
Query: 777 YGKKGWKLYDLESKEYIVSRDVKFYEHE 804
+KG++ Y + Y++S DV F+E +
Sbjct: 741 RVQKGYRCYSHDLHRYLMSADVTFFESQ 768
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.320 0.137 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,683,740,628
Number of Sequences: 2790947
Number of extensions: 120064587
Number of successful extensions: 335953
Number of sequences better than 10.0: 1921
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 464
Number of HSP's that attempted gapping in prelim test: 325871
Number of HSP's gapped (non-prelim): 4929
length of query: 1519
length of database: 848,049,833
effective HSP length: 141
effective length of query: 1378
effective length of database: 454,526,306
effective search space: 626337249668
effective search space used: 626337249668
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)
Medicago: description of AC137510.5