BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136841.8 + phase: 0 /pseudo
(119 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q5Z810 HAT dimerisation domain-containing protein-like... 68 4e-11
UniRef100_Q9LDS0 Transposase-like protein [Arabidopsis thaliana] 58 6e-08
UniRef100_Q9LRP0 Emb|CAB39405.1 [Arabidopsis thaliana] 55 3e-07
UniRef100_Q9LHU1 Similar to Arabidopsis thaliana chromosome 1 [O... 51 5e-06
UniRef100_Q75G98 Hypothetical protein OSJNBa0042F15.17 [Oryza sa... 50 9e-06
UniRef100_Q9LDB0 Transposase-like protein [Arabidopsis thaliana] 50 2e-05
UniRef100_Q6RZV0 Transposase-like protein [Musa acuminata] 49 3e-05
UniRef100_Q9LDK4 Transposase-like protein [Arabidopsis thaliana] 49 3e-05
UniRef100_Q852A8 Hypothetical protein OSJNBb0081B07.17 [Oryza sa... 47 8e-05
UniRef100_Q8S2E8 P0022F10.3 protein [Oryza sativa] 46 2e-04
UniRef100_Q9LIE1 Transposase-like protein [Arabidopsis thaliana] 45 3e-04
UniRef100_Q8L717 Hypothetical protein At4g15020 [Arabidopsis tha... 45 3e-04
UniRef100_Q9SQN5 Hypothetical protein F19K16.28 [Arabidopsis tha... 43 0.002
UniRef100_O81190 Putative transposase [Arabidopsis thaliana] 40 0.009
UniRef100_Q94LV8 Hypothetical protein OSJNBa0082M15.8 [Oryza sat... 40 0.012
UniRef100_Q5VNQ7 HAT dimerisation domain-containing protein-like... 37 0.10
UniRef100_UPI0000221509 UPI0000221509 UniRef100 entry 31 5.7
UniRef100_UPI000042C1AB UPI000042C1AB UniRef100 entry 31 7.5
>UniRef100_Q5Z810 HAT dimerisation domain-containing protein-like [Oryza sativa]
Length = 657
Score = 68.2 bits (165), Expect = 4e-11
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH P+HAAGY LNP+ + F D E K G + C+TR+ + + K+ IQ+D + + +
Sbjct: 477 LHTPVHAAGYILNPRIFYTERFSYDTEIKSGTNACVTRLAKNHYDPKKVAIQMDRYRRKS 536
Query: 65 N--DMGYSVAAGNEVPSV-WWSPFGKGLPELQKF 95
D ++ E+P V WWS G PELQ F
Sbjct: 537 APFDSDSAIQQTMEIPQVRWWSAHGTDTPELQTF 570
>UniRef100_Q9LDS0 Transposase-like protein [Arabidopsis thaliana]
Length = 544
Score = 57.8 bits (138), Expect = 6e-08
Identities = 35/93 (37%), Positives = 46/93 (48%), Gaps = 5/93 (5%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLHAAGYFLNP S F DIE GL + MV D + KI Q+D + +
Sbjct: 384 LHNPLHAAGYFLNPTAFYSTNFHLDIEVVTGLISSLIHMVEDCHVQFKISTQIDMY-RLG 442
Query: 65 NDMGYSVAAGNEV----PSVWWSPFGKGLPELQ 93
D + +++ P+ WW+ PELQ
Sbjct: 443 KDCFNEASQADQITGISPAEWWAHKASQYPELQ 475
>UniRef100_Q9LRP0 Emb|CAB39405.1 [Arabidopsis thaliana]
Length = 883
Score = 55.5 bits (132), Expect = 3e-07
Identities = 30/92 (32%), Positives = 41/92 (43%), Gaps = 3/92 (3%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWAN 65
H PL+ A YF NP + F E G+++CI R+ D R +Q+ D+
Sbjct: 646 HHPLYVAAYFFNPAYKYRPDFMAQSEVVRGVNECIVRLEPDNTRRITALMQIPDYTCAKA 705
Query: 66 DMGYSVAAGNEV---PSVWWSPFGKGLPELQK 94
D G +A G PS WW G ELQ+
Sbjct: 706 DFGTDIAIGTRTELDPSAWWQQHGISCLELQR 737
>UniRef100_Q9LHU1 Similar to Arabidopsis thaliana chromosome 1 [Oryza sativa]
Length = 521
Score = 51.2 bits (121), Expect = 5e-06
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLH+A FLNP + + K + + +++ P++R I ++L F K
Sbjct: 311 LHSPLHSAAAFLNPSIQYNPEVKFFTSIKEEFYHVLDKVLTVPDQRQGITVELHAFRKAQ 370
Query: 65 NDMGYSVAA---GNEVPSVWWSPFGKGLPELQ 93
G ++A N P +WW +G P LQ
Sbjct: 371 GMFGSNIAKEARNNTSPGMWWEQYGDSAPSLQ 402
>UniRef100_Q75G98 Hypothetical protein OSJNBa0042F15.17 [Oryza sativa]
Length = 1005
Score = 50.4 bits (119), Expect = 9e-06
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 11/104 (10%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKG----GLHDCITRMVADPEERAKIEIQLDDF 60
+ PLH AGY+LNP ++ + + +IE G G+ CI +++ D + + KI +L+ +
Sbjct: 742 IKAPLHLAGYYLNPYYYFPN--KQEIESDGSFRAGVISCIDKLIDDEDIQDKIIEELNLY 799
Query: 61 DKWANDMGYSVAA-----GNEVPSVWWSPFGKGLPELQKFVSCI 99
G+ +A N P+ WW G P L+K + I
Sbjct: 800 QDQHGSFGHEIAVRQRKNKNFNPAKWWLNHGTSTPNLRKLAARI 843
>UniRef100_Q9LDB0 Transposase-like protein [Arabidopsis thaliana]
Length = 572
Score = 49.7 bits (117), Expect = 2e-05
Identities = 34/91 (37%), Positives = 42/91 (45%), Gaps = 3/91 (3%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWAN 65
H PLHAAGYFLNP + S F GL + +V +P + KI QLD +
Sbjct: 424 HNPLHAAGYFLNPMAYYSDDFHTYQHVYTGLAFSLVHLVKEPHLQVKIGTQLDVYRYGRG 483
Query: 66 DMGYSVAAG--NEV-PSVWWSPFGKGLPELQ 93
+ AG N V P WW+ PELQ
Sbjct: 484 CFMKASQAGQLNGVSPVNWWTQKANQYPELQ 514
>UniRef100_Q6RZV0 Transposase-like protein [Musa acuminata]
Length = 670
Score = 48.5 bits (114), Expect = 3e-05
Identities = 30/94 (31%), Positives = 43/94 (44%), Gaps = 7/94 (7%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDD--FDKW 63
H LHAA FLNP F+ D+ + G H + +M PEE +IE+ D + K
Sbjct: 481 HSHLHAAAAFLNPSIFYDPSFKFDVNMRNGFHAAMWKMF--PEENDRIELIKDQPVYIKA 538
Query: 64 ANDMGYSVAAGNEV---PSVWWSPFGKGLPELQK 94
+G A P WW+ +G +P LQ+
Sbjct: 539 QGALGSKFAIMGRTLNSPGDWWATYGYEIPVLQR 572
>UniRef100_Q9LDK4 Transposase-like protein [Arabidopsis thaliana]
Length = 605
Score = 48.5 bits (114), Expect = 3e-05
Identities = 33/95 (34%), Positives = 44/95 (45%), Gaps = 7/95 (7%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLHAAGY+LNP S F D E GL + + E + KI QLD + +
Sbjct: 458 LHNPLHAAGYYLNPTSFYSTDFHLDPEVSSGLTHSLVHVA--KEGQIKIASQLDRY-RLG 514
Query: 65 NDMGYSVAAGNEV----PSVWWSPFGKGLPELQKF 95
D + +++ P WW+ PELQ F
Sbjct: 515 KDCFNEASQPDQISGISPIDWWTEKASQHPELQSF 549
>UniRef100_Q852A8 Hypothetical protein OSJNBb0081B07.17 [Oryza sativa]
Length = 779
Score = 47.4 bits (111), Expect = 8e-05
Identities = 29/91 (31%), Positives = 45/91 (48%), Gaps = 4/91 (4%)
Query: 8 PLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDF-DKWAND 66
PLH AG+FLNP F E G+ DC+ R+V+D + + KI+ +L+ + + A D
Sbjct: 552 PLHLAGFFLNPLFFDGVRGGTSSEIFSGMLDCVERLVSDVKIQDKIQKELNVYRSEAAGD 611
Query: 67 MGYSVAAGNE---VPSVWWSPFGKGLPELQK 94
+A P+ WW +G P L +
Sbjct: 612 FRRQMAIRARHTLPPAEWWYTYGGACPNLTR 642
>UniRef100_Q8S2E8 P0022F10.3 protein [Oryza sativa]
Length = 965
Score = 46.2 bits (108), Expect = 2e-04
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Query: 5 LHGPLHAAGYFLNPQFH---SSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFD 61
L PLH AGY+LNP ++ + D + G+ CI ++V D + + KI +L+ +
Sbjct: 697 LKTPLHLAGYYLNPYYYYYPNKQEIESDGSFRAGVISCIDKLVDDEDIQDKIIEELNLYQ 756
Query: 62 KWANDMGYSVAA-----GNEVPSVWWSPFGKGLPELQKFVSCI 99
G+ +A N P+ WW G L+K + I
Sbjct: 757 DQHGSFGHEIAVRQRKNKNFNPAKWWLNHGTSTLNLRKLAARI 799
>UniRef100_Q9LIE1 Transposase-like protein [Arabidopsis thaliana]
Length = 761
Score = 45.4 bits (106), Expect = 3e-04
Identities = 30/101 (29%), Positives = 50/101 (48%), Gaps = 17/101 (16%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLH----DCITRMVADPEERAKIEIQLDDF 60
L PL+AAG++LNP+F + D E + +H DCI ++V D + +I + D
Sbjct: 526 LQQPLYAAGFYLNPKFF----YSIDEEMRSEIHLAVVDCIEKLVPDVNIQ---DIVIKDI 578
Query: 61 DKWANDMGY------SVAAGNEVPSVWWSPFGKGLPELQKF 95
+ + N +G A +P+ WWS +G+ L +F
Sbjct: 579 NSYKNAVGIFGRNLAIRARDTMLPAEWWSTYGESCLNLSRF 619
>UniRef100_Q8L717 Hypothetical protein At4g15020 [Arabidopsis thaliana]
Length = 768
Score = 45.4 bits (106), Expect = 3e-04
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 6 HGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWAN 65
H PL AAG+FLNP+ + E + DCI R+V D + + KI +L +
Sbjct: 533 HIPLLAAGFFLNPKLFYNTNEEMRSELILSVLDCIERLVPDDKIQDKIIKELTSYKTAGG 592
Query: 66 DMGYSV---AAGNEVPSVWWSPFGKGLPELQKF 95
G ++ A +P+ WWS +G+ L +F
Sbjct: 593 VFGRNLAIRARDTMLPAEWWSTYGESCLNLSRF 625
>UniRef100_Q9SQN5 Hypothetical protein F19K16.28 [Arabidopsis thaliana]
Length = 518
Score = 42.7 bits (99), Expect = 0.002
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH PLHAA FLNP + + K + +++ + R I Q+ F +
Sbjct: 309 LHSPLHAAAAFLNPSIQYNPEIKFLTSLKEDFFKVLEKLLPTSDLRRDITNQIFTFTRAK 368
Query: 65 NDMGYSVA--AGNEV-PSVWWSPFGKGLPELQK 94
G ++A A + V P +WW FG P LQ+
Sbjct: 369 GMFGCNLAMEARDSVSPGLWWEQFGDSAPVLQR 401
>UniRef100_O81190 Putative transposase [Arabidopsis thaliana]
Length = 729
Score = 40.4 bits (93), Expect = 0.009
Identities = 27/95 (28%), Positives = 44/95 (45%), Gaps = 4/95 (4%)
Query: 3 RTLHGPLHAAGYFLNPQF-HSSHGFRDDIEGKGGLHDCITRMVADPEER--AKIEIQLDD 59
R L LHAA Y+LNP F + F + E GL + + D + + ++ + +
Sbjct: 503 RMLRHDLHAAAYYLNPAFMYDQPTFCEKPEVMSGLMNLFEKQKNDSKTKLFQELRVYRER 562
Query: 60 FDKWANDMGYSVAAGNEVPSVWWSPFGKGLPELQK 94
++ DM + + ++ P WW FG P LQK
Sbjct: 563 EGSFSLDMALTCSKTSQ-PDEWWRYFGHDAPNLQK 596
>UniRef100_Q94LV8 Hypothetical protein OSJNBa0082M15.8 [Oryza sativa]
Length = 645
Score = 40.0 bits (92), Expect = 0.012
Identities = 23/72 (31%), Positives = 39/72 (53%), Gaps = 6/72 (8%)
Query: 5 LHGPLHAAGYFLNPQFHSSHGFRDDIEGKG----GLHDCITRMVADPEERAKIEIQLDDF 60
L PLH AGY+LNP ++ + + +IE G G+ CI ++V D + + KI +L+ +
Sbjct: 438 LKTPLHLAGYYLNPYYYYPN--KQEIESDGSFRAGVISCIDKLVDDEDIQDKIIEELNLY 495
Query: 61 DKWANDMGYSVA 72
G+ +A
Sbjct: 496 QDQHGSFGHEIA 507
>UniRef100_Q5VNQ7 HAT dimerisation domain-containing protein-like [Oryza sativa]
Length = 622
Score = 37.0 bits (84), Expect = 0.10
Identities = 21/68 (30%), Positives = 37/68 (53%), Gaps = 6/68 (8%)
Query: 9 LHAAGYFLNPQFHSSHGFRDDIEGKG----GLHDCITRMVADPEERAKIEIQLDDFDKWA 64
LH AGY+LNP ++ + + +IE G G+ CI ++V D + + KI +L+ +
Sbjct: 540 LHLAGYYLNPYYYYPN--KQEIESDGSFRAGVISCIDKLVDDEDIQDKIIEELNLYQDQH 597
Query: 65 NDMGYSVA 72
G+ +A
Sbjct: 598 GSFGHEIA 605
>UniRef100_UPI0000221509 UPI0000221509 UniRef100 entry
Length = 764
Score = 31.2 bits (69), Expect = 5.7
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 15 FLNPQFHSSHGFRDDIEGKGGLHDCITRMVADPEERAKIEIQLDDFDKWANDMGYSVAAG 74
+L+P+F FR DI+ D +++ E KIE Q + K+ + A
Sbjct: 360 WLDPRF----AFRRDIQPVEKWDDVTQKILEGSSEGVKIEFQ-QEIQKYRKLLKSERPAP 414
Query: 75 NEVPSVWWSPFGKGLPEL 92
+E P +WW + LP L
Sbjct: 415 SESPFIWWVLHQERLPNL 432
>UniRef100_UPI000042C1AB UPI000042C1AB UniRef100 entry
Length = 591
Score = 30.8 bits (68), Expect = 7.5
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 40 ITRMVADPEERAKIEIQLDDFDKWA--NDMG 68
+ R+VADPE+ K+ +++ +DKWA DMG
Sbjct: 68 LMRLVADPEQGHKLAVRVLAWDKWARPRDMG 98
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.333 0.149 0.525
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 225,943,111
Number of Sequences: 2790947
Number of extensions: 9101169
Number of successful extensions: 21814
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 21796
Number of HSP's gapped (non-prelim): 18
length of query: 119
length of database: 848,049,833
effective HSP length: 95
effective length of query: 24
effective length of database: 582,909,868
effective search space: 13989836832
effective search space used: 13989836832
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC136841.8