BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136840.7 - phase: 0 /pseudo
(638 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_O82276 Putative non-LTR retroelement reverse transcrip... 354 5e-96
UniRef100_O23410 STRONG homology to reverse transcriptase [Arabi... 331 5e-89
UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein [Oryza sativa] 299 1e-79
UniRef100_Q7XGD3 Putative retroelement [Oryza sativa] 297 7e-79
UniRef100_Q8S5K1 Putative retroelement [Oryza sativa] 297 7e-79
UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis tha... 296 1e-78
UniRef100_Q9SZ87 RNA-directed DNA polymerase-like protein [Arabi... 295 2e-78
UniRef100_Q9SN65 Hypothetical protein F25I24.40 [Arabidopsis tha... 291 4e-77
UniRef100_O81630 F8M12.22 protein [Arabidopsis thaliana] 291 4e-77
UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcrip... 291 5e-77
UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcrip... 291 5e-77
UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcrip... 288 3e-76
UniRef100_Q6I5L7 Hypothetical protein OSJNBb0088F07.2 [Oryza sat... 281 4e-74
UniRef100_Q7X970 BZIP-like protein [Oryza sativa] 281 4e-74
UniRef100_Q9ZQM0 Putative non-LTR retroelement reverse transcrip... 278 4e-73
UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa] 277 8e-73
UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [A... 275 4e-72
UniRef100_Q9FW98 Putative non-LTR retroelement reverse transcrip... 271 6e-71
UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcrip... 265 4e-69
UniRef100_O22148 Putative non-LTR retroelement reverse transcrip... 264 5e-69
>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 354 bits (908), Expect = 5e-96
Identities = 176/400 (44%), Positives = 253/400 (63%)
Query: 235 ALNKKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISD 294
A K +V +A+ S +KAPGPDG+ +F++Q VG V F T S +D
Sbjct: 291 AFTKAEVVSAVKSMGRFKAPGPDGYQPVFYQQCWETVGPSVTRFVLEFFETGVLPASTND 350
Query: 295 TLIALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRST 354
L+ LI KV P + FRP+SLCN+++KIITK++V RL+ +++ +IGP Q+SF+PGR +
Sbjct: 351 ALLVLIAKVAKPERIQQFRPVSLCNVLFKIITKMMVTRLKNVISKLIGPAQASFIPGRLS 410
Query: 355 TDNAIVLQEVIHYMRISKKKKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIM 414
DN +++QE +H MR K +KG++ K+DLEKA+D V WDFL+ L G + IM
Sbjct: 411 IDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSRIM 470
Query: 415 HCVTSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPI 474
VT S S+LWNG R F P GLRQGDPLSPYLF+LC+E+L I +V + W+PI
Sbjct: 471 AGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGKREWKPI 530
Query: 475 HVSNPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGV 534
VS G KLSH+ FADD++LF +A+ Q+R IR + +RF + SG K++L KS+ F+S V
Sbjct: 531 AVSCGGSKLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNV 590
Query: 535 TQDKINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKP 594
+++ ++ SGI CT L KYLG PI++ R K F +++++ RLA W+ + L+
Sbjct: 591 SREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLA 650
Query: 595 GRLALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
GR+ L VLSSI + M LP S D +D+ +R F+W
Sbjct: 651 GRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLW 690
>UniRef100_O23410 STRONG homology to reverse transcriptase [Arabidopsis thaliana]
Length = 929
Score = 331 bits (848), Expect = 5e-89
Identities = 162/397 (40%), Positives = 245/397 (60%), Gaps = 17/397 (4%)
Query: 238 KKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLI 297
+ +V A+ S +KAPGPDG+ +F++Q VG+ V F + S +D L+
Sbjct: 246 RDEVVVAVRSMGRFKAPGPDGYQPVFYQQCWETVGESVSKFVMEFFESGVLPKSTNDVLL 305
Query: 298 ALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDN 357
L+ KV P FRP+SLCN+++KIITK++V RL+ +++ +IGP Q+SF+PGR + DN
Sbjct: 306 VLLAKVAKPERITQFRPVSLCNVLFKIITKMMVIRLKNVISKLIGPAQASFIPGRLSFDN 365
Query: 358 AIVLQEVIHYMRISKKKKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCV 417
+V+QE +H MR K +KG++ K+DLEKA+D + WDFL L G + IK IM CV
Sbjct: 366 IVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIRWDFLAETLEAAGLSEGWIKRIMECV 425
Query: 418 TSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVS 477
S+LWNG + F P GLRQGDP+SPYLF+LC+E+L I AV +G W+ I +S
Sbjct: 426 AGPEMSLLWNGEKTDSFTPERGLRQGDPISPYLFVLCIERLCHQIETAVGRGDWKSISIS 485
Query: 478 NPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQD 537
GPK+SH+ FADD++LF +A+ Q K++L KS+ F+S+ V++D
Sbjct: 486 QGGPKVSHVCFADDLILFAEASVAQ-----------------KVSLEKSKIFFSNNVSRD 528
Query: 538 KINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRL 597
+T+ +GI T L KYLG P+++ R K F +++++ RL+ W+++ L+ GR+
Sbjct: 529 LEGLITAETGIGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRI 588
Query: 598 ALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
L VL SI + M LP S+ + +D+V+RNF+W
Sbjct: 589 TLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRNFLW 625
>UniRef100_Q7XLZ5 OSJNBa0086O06.14 protein [Oryza sativa]
Length = 1205
Score = 299 bits (766), Expect = 1e-79
Identities = 156/397 (39%), Positives = 232/397 (58%), Gaps = 1/397 (0%)
Query: 239 KKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIA 298
++++ AL P KAPGPDGF FF++ ++ DV F T + ++DT+I
Sbjct: 419 EEISDALFQIGPLKAPGPDGFPARFFQRNWGVLKRDVIEGVREFFETGEWKEGMNDTVIV 478
Query: 299 LIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNA 358
+IPK + P+ KDFRP+SLCN+IYK++ K LV+RLRP+L II QS+F+PGR TDNA
Sbjct: 479 MIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQSAFVPGRMITDNA 538
Query: 359 IVLQEVIHYM-RISKKKKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCV 417
+V E H + + +++ + + A K+DL KA+D V+W FL L GF + K IM CV
Sbjct: 539 LVAFECFHSIHKCTRESQDFCALKLDLSKAYDRVDWGFLDGALQKLGFGNIWRKWIMSCV 598
Query: 418 TSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVS 477
TS +S+ NGN L PF PT GLR+GDPL+PYLF+ + LS+ + + +P+ V
Sbjct: 599 TSVRYSVRLNGNMLEPFYPTRGLREGDPLNPYLFLFIADGLSNILQRRRDERQIQPLKVC 658
Query: 478 NPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQD 537
P +SHLLFADD LLF KA Q I++ D + + +G IN + +S+ Q+
Sbjct: 659 RSAPGVSHLLFADDSLLFFKAEVIQATRIKEALDLYERCTGQLINPKECSLLFSALCPQE 718
Query: 538 KINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRL 597
+ + + ++ + T DK LG P GR K F I ++ +KRL W + L+ G+
Sbjct: 719 RQDGIKAVLQVERTCFDDKCLGLPTPDGRMKAEQFQPIKERFEKRLTDWSERFLSLAGKE 778
Query: 598 ALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
AL V ++ TY M + +P+ C+ +Q+ RNF W
Sbjct: 779 ALIKSVAQALPTYTMGVFKMPERFCEEYEQLVRNFWW 815
>UniRef100_Q7XGD3 Putative retroelement [Oryza sativa]
Length = 1694
Score = 297 bits (760), Expect = 7e-79
Identities = 155/402 (38%), Positives = 235/402 (57%), Gaps = 8/402 (1%)
Query: 237 NKKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTL 296
+++++ AL P KAPGPDGF F+++ I+ DD+ F +++T
Sbjct: 1043 SEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETA 1102
Query: 297 IALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTD 356
I LIPK + P KDFRPISLCN++YKI++K LV+RLRPIL++++ QS+F+PGR TD
Sbjct: 1103 IVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITD 1162
Query: 357 NAIVLQEVIHYMRISKK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMH 415
NA++ E H+++ +K + Y A+K+DL KA+D V+W+FL + GF +K IM
Sbjct: 1163 NALIAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVDWEFLEQAMVKLGFAHCWVKWIMA 1222
Query: 416 CVTSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIH 475
C+T +++ NG L F P+ GLRQGDPLSP+LF+ + LS + V QG+ PIH
Sbjct: 1223 CITLVRYAVKLNGTLLNTFAPSRGLRQGDPLSPFLFLFVADGLSFLLEEKVDQGAMNPIH 1282
Query: 476 VSNPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFY---SS 532
+ P + HLLFADD LF KA + Q ++++ + ++ +G IN K + S
Sbjct: 1283 ICRHAPAVLHLLFADDTPLFFKAANDQAVVMKEVLETYASCTGQLINPSKCSIMFGQSSP 1342
Query: 533 GVTQDKINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLN 592
Q++I IS + DKYLGFP +GR K F + +++ KR+ W K L+
Sbjct: 1343 TAVQNQIKQTLQIS----NSFEDKYLGFPTPEGRMTKGKFQSLQERLWKRIMLWGEKFLS 1398
Query: 593 KPGRLALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
G+ L VL ++ Y M + LP+SVC+ + ++ RNF W
Sbjct: 1399 TGGKEILIKAVLQAMPVYVMGLFKLPESVCEELTKLVRNFWW 1440
>UniRef100_Q8S5K1 Putative retroelement [Oryza sativa]
Length = 1888
Score = 297 bits (760), Expect = 7e-79
Identities = 155/402 (38%), Positives = 235/402 (57%), Gaps = 8/402 (1%)
Query: 237 NKKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTL 296
+++++ AL P KAPGPDGF F+++ I+ DD+ F +++T
Sbjct: 1000 SEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETA 1059
Query: 297 IALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTD 356
I LIPK + P KDFRPISLCN++YKI++K LV+RLRPIL++++ QS+F+PGR TD
Sbjct: 1060 IVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSAFVPGRLITD 1119
Query: 357 NAIVLQEVIHYMRISKK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMH 415
NA++ E H+++ +K + Y A+K+DL KA+D V+W+FL + GF +K IM
Sbjct: 1120 NALIAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVDWEFLEQAMVKLGFAHCWVKWIMA 1179
Query: 416 CVTSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIH 475
C+T +++ NG L F P+ GLRQGDPLSP+LF+ + LS + V QG+ PIH
Sbjct: 1180 CITLVRYAVKLNGTLLNTFAPSRGLRQGDPLSPFLFLFVADGLSFLLEEKVDQGAMNPIH 1239
Query: 476 VSNPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFY---SS 532
+ P + HLLFADD LF KA + Q ++++ + ++ +G IN K + S
Sbjct: 1240 ICRHAPAVLHLLFADDTPLFFKAANDQAVVMKEVLETYASCTGQLINPSKCSIMFGQSSP 1299
Query: 533 GVTQDKINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLN 592
Q++I IS + DKYLGFP +GR K F + +++ KR+ W K L+
Sbjct: 1300 TAVQNQIKQTLQIS----NSFEDKYLGFPTPEGRMTKGKFQSLQERLWKRIMLWGEKFLS 1355
Query: 593 KPGRLALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
G+ L VL ++ Y M + LP+SVC+ + ++ RNF W
Sbjct: 1356 TGGKEILIKAVLQAMPVYVMGLFKLPESVCEELTKLVRNFWW 1397
>UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis thaliana]
Length = 851
Score = 296 bits (758), Expect = 1e-78
Identities = 160/387 (41%), Positives = 227/387 (58%), Gaps = 7/387 (1%)
Query: 252 KAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIALIPKVDPPLTYKD 311
KAPGPDG F+KQ IVG+DV F +SH S++ T I +IPK+ P T D
Sbjct: 65 KAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSD 124
Query: 312 FRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAIVLQEVIHYMRIS 371
+RPI+LCN++YK+I+K +V+RL+ LN+I+ Q++F+PGR DN ++ E++H +++
Sbjct: 125 YRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVR 184
Query: 372 KK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVTSSSFSILWNGNR 430
K+ K Y+A K D+ KA+D V WDFL + + FGF D I IM V S +S+L NG+
Sbjct: 185 KRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAVKSVHYSVLINGSP 244
Query: 431 LPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSNPGPKLSHLLFAD 490
PT G+RQGDPLSPYLFILC + LS I G + + N P ++HL FAD
Sbjct: 245 HGYISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIRGVRIGNGAPAITHLQFAD 304
Query: 491 DVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSS---GVTQDKINTLTSISG 547
D L F +AN + ++D+FD + +SG KIN+ KS + S G TQ ++ TL +I
Sbjct: 305 DSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPN 364
Query: 548 IRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLALASFVLSSI 607
KYLG P GR KK F +IID++++R ASW K L+ G+ L V ++
Sbjct: 365 ---QGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAM 421
Query: 608 STYYMQINWLPQSVCDNIDQVTRNFIW 634
Y M LPQ + I+ + NF W
Sbjct: 422 PVYAMSCFKLPQGIVSEIESLLMNFWW 448
>UniRef100_Q9SZ87 RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 295 bits (756), Expect = 2e-78
Identities = 159/396 (40%), Positives = 226/396 (56%), Gaps = 1/396 (0%)
Query: 240 KVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIAL 299
++ AL S KAPGPDGF FF Y I+ DV S F+ S P +++T + L
Sbjct: 373 EIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTL 432
Query: 300 IPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAI 359
IPK+ P D+RPI+LCN+ YKI+ K+L RL+P L+ +I +QS+F+PGR+ DN +
Sbjct: 433 IPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVL 492
Query: 360 VLQEVIHYMRISKKKKGY-VAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVT 418
+ E++H++R+S KK +A K D+ KA+D + W+FL+ L GF D I+ +M CV
Sbjct: 493 ITHEILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVC 552
Query: 419 SSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSN 478
+ S+S L NG+ P+ GLRQGDPLSPYLFILC E LS A ++G I V+
Sbjct: 553 TVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVAR 612
Query: 479 PGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDK 538
P+++HLLFADD + F K N T + ++ ++ SG INL KS +SS QD
Sbjct: 613 GSPQVNHLLFADDTMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAITFSSKTPQDI 672
Query: 539 INTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLA 598
+ I + KYLG P GR K+ F I+D++++R SW + L+ G+
Sbjct: 673 KRRVKLSLRIDNEGGIGKYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAGKQI 732
Query: 599 LASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
L VLSS+ +Y M LP S+C I V F W
Sbjct: 733 LLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTRFWW 768
>UniRef100_Q9SN65 Hypothetical protein F25I24.40 [Arabidopsis thaliana]
Length = 1294
Score = 291 bits (745), Expect = 4e-77
Identities = 157/384 (40%), Positives = 226/384 (57%), Gaps = 1/384 (0%)
Query: 252 KAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIALIPKVDPPLTYKD 311
KAPGPDG F+K IVG DV F TS+ SI+ T I +IPK+ P T D
Sbjct: 806 KAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSD 865
Query: 312 FRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAIVLQEVIHYMRIS 371
+RPI+LCN++YKII+K LV RL+ L+ I+ Q++F+PGR DN ++ E++H ++
Sbjct: 866 YRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTR 925
Query: 372 KK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVTSSSFSILWNGNR 430
K+ + Y+A K D+ KA+D V W+FL + + FGF +T IK IM V S ++S+L NG
Sbjct: 926 KRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNGIP 985
Query: 431 LPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSNPGPKLSHLLFAD 490
+P G+RQGDPLSPYLFILC + L+ I N V +G I + N P ++HL FAD
Sbjct: 986 HGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFAD 1045
Query: 491 DVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDKINTLTSISGIRC 550
D L F ++N + ++D+FD + +SG KIN+ KS + S V N L +I GI+
Sbjct: 1046 DSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQS 1105
Query: 551 TTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLALASFVLSSISTY 610
KYLG P GR K+ F +II++++KR +SW K L+ G+ + V S+ Y
Sbjct: 1106 HGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVY 1165
Query: 611 YMQINWLPQSVCDNIDQVTRNFIW 634
M LP ++ I+ + NF W
Sbjct: 1166 AMSCFKLPLNIVSEIEALLMNFWW 1189
>UniRef100_O81630 F8M12.22 protein [Arabidopsis thaliana]
Length = 1662
Score = 291 bits (745), Expect = 4e-77
Identities = 157/384 (40%), Positives = 226/384 (57%), Gaps = 1/384 (0%)
Query: 252 KAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIALIPKVDPPLTYKD 311
KAPGPDG F+K IVG DV F TS+ SI+ T I +IPK+ P T D
Sbjct: 826 KAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPETLSD 885
Query: 312 FRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAIVLQEVIHYMRIS 371
+RPI+LCN++YKII+K LV RL+ L+ I+ Q++F+PGR DN ++ E++H ++
Sbjct: 886 YRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTR 945
Query: 372 KK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVTSSSFSILWNGNR 430
K+ + Y+A K D+ KA+D V W+FL + + FGF +T IK IM V S ++S+L NG
Sbjct: 946 KRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNGIP 1005
Query: 431 LPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSNPGPKLSHLLFAD 490
+P G+RQGDPLSPYLFILC + L+ I N V +G I + N P ++HL FAD
Sbjct: 1006 HGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFAD 1065
Query: 491 DVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDKINTLTSISGIRC 550
D L F ++N + ++D+FD + +SG KIN+ KS + S V N L +I GI+
Sbjct: 1066 DSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQS 1125
Query: 551 TTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLALASFVLSSISTY 610
KYLG P GR K+ F +II++++KR +SW K L+ G+ + V S+ Y
Sbjct: 1126 HGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVY 1185
Query: 611 YMQINWLPQSVCDNIDQVTRNFIW 634
M LP ++ I+ + NF W
Sbjct: 1186 AMSCFKLPLNIVSEIEALLMNFWW 1209
>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 291 bits (744), Expect = 5e-77
Identities = 157/384 (40%), Positives = 222/384 (56%), Gaps = 1/384 (0%)
Query: 252 KAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIALIPKVDPPLTYKD 311
KAPGPDG F+K IVG DV F TS PSI+ T I +IPK+ P T D
Sbjct: 826 KAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSD 885
Query: 312 FRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAIVLQEVIHYMRIS 371
+RPI+LCN++YK+I+K LV+RL+ LN+I+ Q++F+PGR DN ++ EV+H +++
Sbjct: 886 YRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVR 945
Query: 372 KK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVTSSSFSILWNGNR 430
K+ K Y+A K D+ KA+D V WDFL + + FGF + I IM V S +S+L NG+
Sbjct: 946 KRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSP 1005
Query: 431 LPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSNPGPKLSHLLFAD 490
PT G+RQGDPLSPYLFILC + LS IN G + + N P ++HL FAD
Sbjct: 1006 HGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFAD 1065
Query: 491 DVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDKINTLTSISGIRC 550
D L F +AN + ++D+FD + +SG KIN+ KS + S V + L I I
Sbjct: 1066 DSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPN 1125
Query: 551 TTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLALASFVLSSISTY 610
KYLG P GR KK F +IID+++KR ++W + L+ G+ + V ++ Y
Sbjct: 1126 QGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVY 1185
Query: 611 YMQINWLPQSVCDNIDQVTRNFIW 634
M LP+ + I+ + NF W
Sbjct: 1186 AMSCFKLPKGIVSEIESLLMNFWW 1209
>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 291 bits (744), Expect = 5e-77
Identities = 157/384 (40%), Positives = 222/384 (56%), Gaps = 1/384 (0%)
Query: 252 KAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIALIPKVDPPLTYKD 311
KAPGPDG F+K IVG DV F TS PSI+ T I +IPK+ P T D
Sbjct: 600 KAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSD 659
Query: 312 FRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAIVLQEVIHYMRIS 371
+RPI+LCN++YK+I+K LV+RL+ LN+I+ Q++F+PGR DN ++ EV+H +++
Sbjct: 660 YRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVR 719
Query: 372 KK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVTSSSFSILWNGNR 430
K+ K Y+A K D+ KA+D V WDFL + + FGF + I IM V S +S+L NG+
Sbjct: 720 KRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSP 779
Query: 431 LPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSNPGPKLSHLLFAD 490
PT G+RQGDPLSPYLFILC + LS IN G + + N P ++HL FAD
Sbjct: 780 HGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFAD 839
Query: 491 DVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDKINTLTSISGIRC 550
D L F +AN + ++D+FD + +SG KIN+ KS + S V + L I I
Sbjct: 840 DSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPN 899
Query: 551 TTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLALASFVLSSISTY 610
KYLG P GR KK F +IID+++KR ++W + L+ G+ + V ++ Y
Sbjct: 900 QGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVY 959
Query: 611 YMQINWLPQSVCDNIDQVTRNFIW 634
M LP+ + I+ + NF W
Sbjct: 960 AMSCFKLPKGIVSEIESLLMNFWW 983
>UniRef100_Q9SJ38 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 288 bits (738), Expect = 3e-76
Identities = 159/399 (39%), Positives = 224/399 (55%), Gaps = 1/399 (0%)
Query: 237 NKKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTL 296
N ++V A+ S KAPGPDGF F+ Y HI+ DV F + +F +++T
Sbjct: 324 NDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETH 383
Query: 297 IALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTD 356
I LIPK P D+RPI+LCNI YKI+ K++ R++ IL +I QS+F+PGR +D
Sbjct: 384 IRLIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISD 443
Query: 357 NAIVLQEVIHYMRISKKKKGY-VAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMH 415
N ++ EV+H++R S KK +A K D+ KA+D V WDFL+ L FGF I ++
Sbjct: 444 NVLITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLE 503
Query: 416 CVTSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIH 475
CVTS S+S L NG PT GLRQGDPLSP LFILC E LS A + +
Sbjct: 504 CVTSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVR 563
Query: 476 VSNPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVT 535
VS GP+++HLLFADD + F+K++ + ++ R+ K SG IN HKS +SS
Sbjct: 564 VSINGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTP 623
Query: 536 QDKINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPG 595
+ + I IR KYLG P GR K+ F IIDK++++ SW ++ L++ G
Sbjct: 624 RSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAG 683
Query: 596 RLALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
+ + VL+S+ Y M LP ++C I + F W
Sbjct: 684 KQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWW 722
>UniRef100_Q6I5L7 Hypothetical protein OSJNBb0088F07.2 [Oryza sativa]
Length = 1264
Score = 281 bits (719), Expect = 4e-74
Identities = 153/398 (38%), Positives = 218/398 (54%), Gaps = 1/398 (0%)
Query: 238 KKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLI 297
+++V AL KAPG DG IF+K++ + GD V + + +DT++
Sbjct: 778 REEVWVALKDMGDLKAPGADGIPAIFYKKFLSLAGDKVKDEVLAVLNGGDMPQGWNDTVV 837
Query: 298 ALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDN 357
LIPK P T KD RPISLCN+ YK+I+KV+V+RL+ +L II P QS+F+P R T N
Sbjct: 838 VLIPKTKQPDTLKDLRPISLCNVAYKLISKVIVNRLKVVLLEIISPSQSAFVPRRLITYN 897
Query: 358 AIVLQEVIHYMRISKK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHC 416
++ E+ HY+ KK K G A K+D+ KA+D V WDFLR + GF D + L+M C
Sbjct: 898 VLLAYELTHYLNQRKKGKNGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQWVNLVMKC 957
Query: 417 VTSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHV 476
VTS ++ I NG P GLRQGDPLSPYLFI+C E LS+ + A G E I V
Sbjct: 958 VTSVTYRIKINGEHSDQIYPQRGLRQGDPLSPYLFIICAEGLSALLQKAQADGKIEGIKV 1017
Query: 477 SNPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQ 536
P+++HL FADD L+ +A + +R + + + SG IN KS +S Q
Sbjct: 1018 CRDTPRINHLFFADDSLVLMRAGQNDAQELRRVLNIYEVASGQVINKDKSSVLFSPNTLQ 1077
Query: 537 DKINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGR 596
+ S I ++YLG P+ G+ ++ F +I K+ R+ WQ KLL+K G+
Sbjct: 1078 SDRMEVRSALCINQEAKNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKLLSKAGK 1137
Query: 597 LALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
L V +I TY M L + +CD I+ + + W
Sbjct: 1138 EILVKAVAQAIPTYAMSCFDLTKGLCDEINSMISKWWW 1175
>UniRef100_Q7X970 BZIP-like protein [Oryza sativa]
Length = 2367
Score = 281 bits (719), Expect = 4e-74
Identities = 149/396 (37%), Positives = 221/396 (55%), Gaps = 1/396 (0%)
Query: 240 KVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIAL 299
+++ A+ P K+PGPDGF F+++ + D+ F T ++DT I L
Sbjct: 1166 EISQAIFQIGPLKSPGPDGFPARFYQRNWGTIKADIIGAVRRFFQTGLMPEGVNDTAIVL 1225
Query: 300 IPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAI 359
IPK + P+ +DFRPISLCN++YK+++K LV+RLRPIL++++ QS+F+ GR TDNA+
Sbjct: 1226 IPKKEQPVDLRDFRPISLCNVVYKVVSKCLVNRLRPILDDLVSVEQSAFVQGRMITDNAL 1285
Query: 360 VLQEVIHYMRISKKKK-GYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVT 418
+ E H M+ +KK A+K+DL KA+D V+W FL + GF + IM CVT
Sbjct: 1286 LAFECFHAMQKNKKANHAACAYKLDLSKAYDRVDWRFLEMAMNKLGFARRWVNWIMKCVT 1345
Query: 419 SSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSN 478
S + + +NG L F PT GLRQGDPL P+LF+ + LS + V Q S P V
Sbjct: 1346 SVRYMVKFNGTLLQSFAPTRGLRQGDPLLPFLFLFVADGLSLLLKEKVAQNSLTPFKVCR 1405
Query: 479 PGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDK 538
P +SHLLFADD LLF KA+ + ++++ ++ +G IN K T
Sbjct: 1406 AAPGISHLLFADDTLLFFKAHQREAEVVKEVLSSYAMGTGQLINPAKCSILMGGASTPAV 1465
Query: 539 INTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLA 598
++ I + D+YLGFP +GR K F + K+ KR+ W L+ G+
Sbjct: 1466 SEAISEILQVERDRFEDRYLGFPTPEGRMHKGRFQSLQAKIWKRVIQWGENHLSTGGKEV 1525
Query: 599 LASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
L V+ +I Y M I LP+SV D++ ++T+NF W
Sbjct: 1526 LIKAVIQAIPVYVMGIFKLPESVIDDLTKLTKNFWW 1561
>UniRef100_Q9ZQM0 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1044
Score = 278 bits (711), Expect = 4e-73
Identities = 153/403 (37%), Positives = 229/403 (55%), Gaps = 3/403 (0%)
Query: 237 NKKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTL 296
N +++ +A S KAPGPDGF FF+ VG ++ S F +S P+I+ T
Sbjct: 255 NPEEIKSACFSIHADKAPGPDGFSASFFQSNWMTVGPNIVLEIQSFFSSSTLQPTINKTH 314
Query: 297 IALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTD 356
I LIPK+ D+RPI+LC + YKII+K+L RL+PIL II QS+F+P R++ D
Sbjct: 315 ITLIPKIQSLKRMVDYRPIALCTVFYKIISKLLSRRLQPILQEIISENQSAFVPKRASND 374
Query: 357 NAIVLQEVIHYMR-ISKKKKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMH 415
N ++ E +HY++ + +K+ ++A K ++ KA+D + WDF++ + + GF T I I+
Sbjct: 375 NVLITHEALHYLKSLGAEKRCFMAVKTNMSKAYDRIEWDFIKLVMQEMGFHQTWISWILQ 434
Query: 416 CVTSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIH 475
C+T+ S+S L NG+ P GLRQGDPLSP+LFI+C E LS A GS +
Sbjct: 435 CITTVSYSFLLNGSAQGAVTPERGLRQGDPLSPFLFIICSEVLSGLCRKAQLDGSLLGLR 494
Query: 476 VSNPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVT 535
VS P+++HLLFADD + F +++ + + ++ + SG IN KS A S T
Sbjct: 495 VSKGNPRVNHLLFADDTIFFCRSDLKSCKTFLCILKKYEEASGQMINKSKS-AITFSRKT 553
Query: 536 QDKINT-LTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKP 594
D I T I GI+ L KYLG P + GR K+ F I+D++++R SW ++ L+
Sbjct: 554 PDHIKTEAQQILGIQLVGGLGKYLGLPKMFGRKKRDLFNQIVDRIRQRSLSWSSRFLSTA 613
Query: 595 GRLALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIWRDS 637
G+ + VL+S+ TY M L S+C I +F W S
Sbjct: 614 GKTTMLKSVLASMPTYTMSCFKLLVSLCKRIQSALTHFWWDSS 656
>UniRef100_Q75M12 Hypothetical protein P0676G05.2 [Oryza sativa]
Length = 1936
Score = 277 bits (708), Expect = 8e-73
Identities = 149/402 (37%), Positives = 227/402 (56%), Gaps = 9/402 (2%)
Query: 238 KKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLI 297
++++ A+ P K+P PDGF F+++ + D+ + F + ++DT I
Sbjct: 1070 EEEIAQAIFQIGPLKSPRPDGFPARFYQRNWGTLKSDIILAVRNFFQSGLMPKGVNDTAI 1129
Query: 298 ALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDN 357
LIPK D P+ KD+RPISLCN++YK+++K LV+RLRPIL++++ QS+F+ GR TDN
Sbjct: 1130 VLIPKKDQPIDLKDYRPISLCNVVYKVVSKCLVNRLRPILDDLVSKEQSAFIQGRMITDN 1189
Query: 358 AIVLQEVIHYMRISKKKKGYV-AFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHC 416
A++ E H ++ +KK A+K+DL KA+D V+W FL L GF + IM C
Sbjct: 1190 ALLAFECFHSIQKNKKANSAACAYKLDLSKAYDRVDWRFLELALNKLGFAHRWVSWIMLC 1249
Query: 417 VTSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHV 476
VT+ +S+ +NG L F PT GLRQG+PLSP+LF+ + LS + V Q S P+ +
Sbjct: 1250 VTTVRYSVKFNGTLLRSFAPTRGLRQGEPLSPFLFLFVADGLSLLLKEKVAQNSLTPLKI 1309
Query: 477 SNPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYS----S 532
P +S+LLFADD LLF KA + ++++ +++ +G IN K + S
Sbjct: 1310 CRQAPGISYLLFADDTLLFFKAEKKEAEVVKEVLTNYAQGTGQLINPAKCSILFGEASPS 1369
Query: 533 GVTQDKINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLN 592
V++D NTL + D+YLGFP +GR K F + K+ KR+ W L+
Sbjct: 1370 SVSEDIRNTLQ----VERDNFEDRYLGFPTPEGRMHKGRFQSLQAKIAKRVIQWGENFLS 1425
Query: 593 KPGRLALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
G+ L V+ +I Y M + P SV D + ++TRNF W
Sbjct: 1426 SGGKEILIKAVIQAIPVYVMGLFKFPDSVYDELTKMTRNFWW 1467
>UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 275 bits (702), Expect = 4e-72
Identities = 150/396 (37%), Positives = 214/396 (53%), Gaps = 1/396 (0%)
Query: 240 KVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIAL 299
+V AAL P KAPGPDG +FF++ I+ D+ +L S FD ++ T I L
Sbjct: 216 EVRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICL 275
Query: 300 IPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAI 359
IPK + P + RPISLCN+ YK+I+K+L RL+ +L N+I QS+F+ GR +DN +
Sbjct: 276 IPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNIL 335
Query: 360 VLQEVIHYMRISKK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVT 418
+ QE+ H +R + K ++A K D+ KA+D V W+F+ + L GF + I IM C+T
Sbjct: 336 IAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCIT 395
Query: 419 SSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSN 478
+ + +L NG P GLRQGDPLSPYLFILC E L + I A +Q I V+
Sbjct: 396 TVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVAT 455
Query: 479 PGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDK 538
P P +SHLLFADD L F KAN Q I ++ ++ SG +IN KS + V
Sbjct: 456 PSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSI 515
Query: 539 INTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLA 598
+ I GI + YLG P G K F F+ D++Q R+ W K L+K G+
Sbjct: 516 KADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEV 575
Query: 599 LASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
+ V +++ Y M LP+++ + F W
Sbjct: 576 MIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWW 611
>UniRef100_Q9FW98 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
Length = 1382
Score = 271 bits (692), Expect = 6e-71
Identities = 140/396 (35%), Positives = 215/396 (53%)
Query: 239 KKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIA 298
+++ AL KAPGPDGF +F++ + I+ + + N L + D+++
Sbjct: 447 EEIKTALFQMGSTKAPGPDGFPALFYQTHWGILEEHICNAVRGFLLGEEIPEGLCDSVVV 506
Query: 299 LIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNA 358
LIPKV+ FRPISLCN++YKI +KVL +RL+P L +I+ +QS+F+PGR TD+A
Sbjct: 507 LIPKVNNASHLSKFRPISLCNVLYKIASKVLANRLKPFLPDIVSEFQSAFVPGRLITDSA 566
Query: 359 IVLQEVIHYMRISKKKKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVT 418
+V E +H +R K + A KID+ KA+D V W +L CL GF I +M CV+
Sbjct: 567 LVAYECLHTIRKQHNKNPFFALKIDMMKAYDRVEWAYLSGCLSKLGFSQDWINTVMRCVS 626
Query: 419 SSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSN 478
S +++ NG P P+ G+RQGDP+SPYLF+LC E LS ++ G + I
Sbjct: 627 SVRYAVKINGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHKKEVAGELQGIKNGR 686
Query: 479 PGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDK 538
GP +SHLLFADD + F KA+S ++ +++ + SG KINLHKS F+
Sbjct: 687 HGPPISHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQKINLHKSSIFFGKRCPDAV 746
Query: 539 INTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLA 598
++ S + D YLG P G + F F+ +++ KR+ W ++ L++ G
Sbjct: 747 KISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTDRPLSRAGMET 806
Query: 599 LASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
+ V +I Y M +P S+C+ + + W
Sbjct: 807 MLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWW 842
>UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1344
Score = 265 bits (676), Expect = 4e-69
Identities = 149/396 (37%), Positives = 212/396 (52%), Gaps = 1/396 (0%)
Query: 240 KVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDTLIAL 299
+V A+ S APGPDGF +FF+Q+ +V + F T + T I L
Sbjct: 410 EVYNAVFSINKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICL 469
Query: 300 IPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTTDNAI 359
IPK+ P D RPISLC+++YKII+K+L RL+ L I+ QS+F+P R +DN +
Sbjct: 470 IPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNIL 529
Query: 360 VLQEVIHYMRISKK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIMHCVT 418
V E+IH +R + + K ++AFK D+ KA+D V W FL + + GF + I IM+CVT
Sbjct: 530 VAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCVT 589
Query: 419 SSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPIHVSN 478
S S+S+L NG PT G+RQGDPLSP LF+LC E L +N A Q G I +
Sbjct: 590 SVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQD 649
Query: 479 PGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGVTQDK 538
++HLLFADD LL KA + + ++ + SG INL+KS + V
Sbjct: 650 KKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDIQI 709
Query: 539 INTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKPGRLA 598
+ + S SGI KYLG P K+ F FI +K+Q RL W K L++ G+
Sbjct: 710 KDWIKSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEV 769
Query: 599 LASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIW 634
L + ++ Y M LP+++C + V +F W
Sbjct: 770 LLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWW 805
>UniRef100_O22148 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 264 bits (675), Expect = 5e-69
Identities = 135/404 (33%), Positives = 223/404 (54%), Gaps = 1/404 (0%)
Query: 236 LNKKKVTAALHSTKPYKAPGPDGFHCIFFKQYSHIVGDDVFNLATSTFLTSHFDPSISDT 295
+ K++V A S P+K PGPDG + ++Q+ +GD + + + F + + ++ T
Sbjct: 428 ITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKT 487
Query: 296 LIALIPKVDPPLTYKDFRPISLCNIIYKIITKVLVHRLRPILNNIIGPYQSSFLPGRSTT 355
I LIPK+ DFRPISLCN+IYK+I K++ +RL+ IL ++I Q++F+ GR +
Sbjct: 488 NICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLIS 547
Query: 356 DNAIVLQEVIHYMRISKK-KKGYVAFKIDLEKAFDNVNWDFLRSCLCDFGFPDTTIKLIM 414
DN ++ E++H + + K + ++A K D+ KA+D V W FL + GF D I+LIM
Sbjct: 548 DNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIM 607
Query: 415 HCVTSSSFSILWNGNRLPPFEPTHGLRQGDPLSPYLFILCMEKLSSAINNAVQQGSWEPI 474
CV S + +L NG P+ GLRQGDPLSPYLF++C E L + +A Q+ +
Sbjct: 608 ECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGL 667
Query: 475 HVSNPGPKLSHLLFADDVLLFTKANSTQLRFIRDLFDRFSKFSGLKINLHKSRAFYSSGV 534
V+ P +SHLLFADD + + K N L I + + +S SG ++N KS ++ +
Sbjct: 668 KVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHI 727
Query: 535 TQDKINTLTSISGIRCTTSLDKYLGFPIIKGRPKKSDFLFIIDKMQKRLASWQNKLLNKP 594
++++ + GI YLG P K + ++ D++ K++ WQ+ L+
Sbjct: 728 SEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGWQSNFLSPG 787
Query: 595 GRLALASFVLSSISTYYMQINWLPQSVCDNIDQVTRNFIWRDSR 638
G+ L V ++ TY M +P+++C I+ V F W++ +
Sbjct: 788 GKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKK 831
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.350 0.156 0.550
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 984,809,989
Number of Sequences: 2790947
Number of extensions: 39136326
Number of successful extensions: 161748
Number of sequences better than 10.0: 1178
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 456
Number of HSP's that attempted gapping in prelim test: 158970
Number of HSP's gapped (non-prelim): 1445
length of query: 638
length of database: 848,049,833
effective HSP length: 134
effective length of query: 504
effective length of database: 474,062,935
effective search space: 238927719240
effective search space used: 238927719240
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.9 bits)
S2: 78 (34.7 bits)
Medicago: description of AC136840.7