BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136472.17 - phase: 0
(124 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6ESZ9 Putative serine decarboxylase [Oryza sativa] 181 4e-45
UniRef100_Q9MA74 Histidine decarboxylase [Arabidopsis thaliana] 166 9e-41
UniRef100_Q9SXL2 Serine decarboxylase [Brassica napus] 162 2e-39
UniRef100_Q8RV06 Putative histidine decarboxylase [Oryza sativa] 114 4e-25
UniRef100_Q7X8D4 OSJNBa0070D17.5 protein [Oryza sativa] 113 9e-25
UniRef100_P54772 Histidine decarboxylase [Lycopersicon esculentum] 105 3e-22
UniRef100_Q7NIG4 Histidine decarboxylase [Gloeobacter violaceus] 53 1e-06
UniRef100_Q6W4S7 Histidine decarboxylase [Vibrio anguillarum] 53 2e-06
UniRef100_O41080 A598L protein [Paramecium bursaria chlorella vi... 52 2e-06
UniRef100_Q76HJ4 Probable acinetobactin biosynthesis protein [Ac... 43 0.002
UniRef100_P95477 Histidine decarboxylase [Pseudomonas fluorescens] 42 0.002
UniRef100_P05034 Histidine decarboxylase [Morganella morganii] 42 0.002
UniRef100_P28578 Histidine decarboxylase [Klebsiella planticola] 42 0.003
UniRef100_P28577 Histidine decarboxylase [Enterobacter aerogenes] 42 0.003
UniRef100_Q98A07 Histidine decarboxylase [Rhizobium loti] 40 0.009
UniRef100_Q846V2 Putative pyridoxal 5' phosphate-dependent histi... 38 0.060
UniRef100_Q64ZP5 Arylsulfatase regulator [Bacteroides fragilis] 33 1.1
UniRef100_Q64DQ8 Group II decarboxylase [uncultured archaeon GZf... 33 1.1
UniRef100_Q8KCG8 Methionyl-tRNA formyltransferase [Chlorobium te... 33 1.9
UniRef100_UPI00003ACBC5 UPI00003ACBC5 UniRef100 entry 32 2.5
>UniRef100_Q6ESZ9 Putative serine decarboxylase [Oryza sativa]
Length = 482
Score = 181 bits (458), Expect = 4e-45
Identities = 84/109 (77%), Positives = 97/109 (88%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
F+KEVQKCLRNAHY KDRL EAGIGAMLNELSSTVVFERP DEEF+R+WQLAC+GNIAHV
Sbjct: 371 FQKEVQKCLRNAHYLKDRLKEAGIGAMLNELSSTVVFERPKDEEFVRRWQLACEGNIAHV 430
Query: 68 VVMPNVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCLAYV 116
VVMP+VTI+KLD FLNEL +KRATW++ G+ QP C+A DVGE +CL +
Sbjct: 431 VVMPSVTIDKLDYFLNELTEKRATWYQDGSCQPPCLAKDVGEENCLCSI 479
>UniRef100_Q9MA74 Histidine decarboxylase [Arabidopsis thaliana]
Length = 482
Score = 166 bits (421), Expect = 9e-41
Identities = 79/106 (74%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
F+KEVQKCLRNAHY KDRL EAGI AMLNELSSTVVFERP DEEF+R+WQLAC+G+IAHV
Sbjct: 373 FQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPKDEEFVRRWQLACQGDIAHV 432
Query: 68 VVMPNVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
VVMP+VTIEKLD+FL +LV+ R W+E G+ QP C+AS+VG N+C+
Sbjct: 433 VVMPSVTIEKLDNFLKDLVKHRLIWYEDGS-QPPCLASEVGTNNCI 477
>UniRef100_Q9SXL2 Serine decarboxylase [Brassica napus]
Length = 490
Score = 162 bits (410), Expect = 2e-39
Identities = 76/106 (71%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
F+KEVQKCLRNAHY KDRL EAGI AMLNELSSTVVFERP +EEF+R+WQLAC+G+IAHV
Sbjct: 381 FQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPKEEEFVRRWQLACQGDIAHV 440
Query: 68 VVMPNVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
VVMP+VT+EKLD FL +LV+ R W+E G+ QP C+ DVG N+C+
Sbjct: 441 VVMPSVTVEKLDHFLKDLVEHRLVWYEDGS-QPPCLVKDVGINNCI 485
>UniRef100_Q8RV06 Putative histidine decarboxylase [Oryza sativa]
Length = 467
Score = 114 bits (286), Expect = 4e-25
Identities = 53/103 (51%), Positives = 70/103 (67%)
Query: 10 KEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVV 69
KEV C+ NA Y + L + GI A N LS+ VVFERP DE + +WQLAC+GN+AH+VV
Sbjct: 351 KEVHICMGNARYLEVLLKQVGISASCNTLSNIVVFERPKDERIVCRWQLACEGNLAHIVV 410
Query: 70 MPNVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSC 112
MPNVT EKL F+ EL +KR W++ F C+A D+G+ +C
Sbjct: 411 MPNVTFEKLTVFVEELAEKRKDWYQDKGFDIPCLAVDIGKENC 453
>UniRef100_Q7X8D4 OSJNBa0070D17.5 protein [Oryza sativa]
Length = 446
Score = 113 bits (283), Expect = 9e-25
Identities = 55/104 (52%), Positives = 70/104 (66%), Gaps = 5/104 (4%)
Query: 10 KEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVV 69
K V+ CL+NA Y RL E G+ LN LS TVVFERP+DE F+RKWQLAC+G IAHVVV
Sbjct: 336 KTVENCLKNAQYLALRLREMGVSVFLNALSITVVFERPNDETFVRKWQLACQGKIAHVVV 395
Query: 70 MPNVTIEKLDDFLNELVQKRATWFEYGTFQPYCIASDVGENSCL 113
MPNV++E+++ FL E + R Q C+A DV + +CL
Sbjct: 396 MPNVSLERINMFLEEFTKSR-----IALHQDKCVAGDVSQENCL 434
>UniRef100_P54772 Histidine decarboxylase [Lycopersicon esculentum]
Length = 413
Score = 105 bits (261), Expect = 3e-22
Identities = 49/97 (50%), Positives = 65/97 (66%), Gaps = 1/97 (1%)
Query: 15 CLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVT 74
C+ NA Y KDRL+EAGI MLN+ S TVVFERP D +FIR+W L C +AHVV+MP +T
Sbjct: 307 CIENARYLKDRLLEAGISVMLNDFSITVVFERPCDHKFIRRWNLCCLRGMAHVVIMPGIT 366
Query: 75 IEKLDDFLNELVQKR-ATWFEYGTFQPYCIASDVGEN 110
E +D F +L+Q+R W++ P C+A D+ N
Sbjct: 367 RETIDSFFKDLMQERNYKWYQDVKALPPCLADDLALN 403
>UniRef100_Q7NIG4 Histidine decarboxylase [Gloeobacter violaceus]
Length = 382
Score = 53.1 bits (126), Expect = 1e-06
Identities = 30/79 (37%), Positives = 46/79 (57%), Gaps = 1/79 (1%)
Query: 7 SFEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAH 66
+F E + + A + +L + G+ A+LN LSSTVVF RP + I K+QLA + + AH
Sbjct: 300 TFHLEAEAIVDKARFLHQKLSDQGLPALLNPLSSTVVFPRP-PQPVIAKYQLAVQVDQAH 358
Query: 67 VVVMPNVTIEKLDDFLNEL 85
V+M + E L++F L
Sbjct: 359 AVIMQQHSYELLEEFAGVL 377
>UniRef100_Q6W4S7 Histidine decarboxylase [Vibrio anguillarum]
Length = 400
Score = 52.8 bits (125), Expect = 2e-06
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
++ +V +CL A Y R E GI A N+ S+TVVF P E RK LA G++AH+
Sbjct: 306 WQGKVNQCLNMAEYTVQRFQEVGINAWRNKNSNTVVFPCP-SEPVWRKHSLANSGSVAHI 364
Query: 68 VVMPNVT-IEKLDDFLNELV 86
+ MP++ +KLD + +++
Sbjct: 365 ITMPHLDGPDKLDPLIEDVI 384
>UniRef100_O41080 A598L protein [Paramecium bursaria chlorella virus 1]
Length = 363
Score = 52.4 bits (124), Expect = 2e-06
Identities = 31/79 (39%), Positives = 46/79 (57%), Gaps = 3/79 (3%)
Query: 9 EKEVQKCLRNAHYFKDRLIEAGIGAM--LNELSSTVVFERPHDEEFIRKWQLACKGNIAH 66
EKEV+ CL Y +RL EA M N+ S VVF++P DE I KW LA +H
Sbjct: 279 EKEVEDCLERTEYLFERLREAVPECMPWKNDRSVIVVFKKPSDE-IIFKWSLATVKGRSH 337
Query: 67 VVVMPNVTIEKLDDFLNEL 85
+V+ +VT + +D F++++
Sbjct: 338 AIVLNHVTTDIIDAFVHDM 356
>UniRef100_Q76HJ4 Probable acinetobactin biosynthesis protein [Acinetobacter
baumannii]
Length = 383
Score = 42.7 bits (99), Expect = 0.002
Identities = 25/59 (42%), Positives = 32/59 (53%), Gaps = 1/59 (1%)
Query: 10 KEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVV 68
+ +Q CL+ A Y DR GI A N S TVVF P E +K LA GN+AH++
Sbjct: 294 QRIQHCLKMAQYAVDRFQVVGIPAWRNPNSITVVFPCP-SEHIWKKHYLATSGNMAHLI 351
>UniRef100_P95477 Histidine decarboxylase [Pseudomonas fluorescens]
Length = 405
Score = 42.4 bits (98), Expect = 0.002
Identities = 31/89 (34%), Positives = 45/89 (49%), Gaps = 5/89 (5%)
Query: 2 AMLPYSFEK---EVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQL 58
A+ YS+ + ++ L A Y DR +GI A NE S TVVF P E K+ L
Sbjct: 284 ALRSYSWAEWRHRIKHSLDTAQYAVDRFQASGIDAWRNENSITVVFPCP-SERIATKYCL 342
Query: 59 ACKGNIAHVVVMP-NVTIEKLDDFLNELV 86
A GN AH++ P + +D ++E+V
Sbjct: 343 ATSGNSAHLITTPHHHDCSMIDALIDEVV 371
>UniRef100_P05034 Histidine decarboxylase [Morganella morganii]
Length = 377
Score = 42.4 bits (98), Expect = 0.002
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
+++ + + L A Y DR+ +AGI A N+ S TVVF P E R+ LA G++AH+
Sbjct: 291 WKRRITRSLDMAQYAVDRMQKAGINAWRNKNSITVVFPCP-SERVWREHCLATSGDVAHL 349
Query: 68 VV----MPNVTIEKLDD 80
+ + V I+KL D
Sbjct: 350 ITTAHHLDTVQIDKLID 366
>UniRef100_P28578 Histidine decarboxylase [Klebsiella planticola]
Length = 377
Score = 42.0 bits (97), Expect = 0.003
Identities = 26/80 (32%), Positives = 44/80 (54%), Gaps = 2/80 (2%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
+ + +++ L A Y DR AGI A N+ S TVVF P E +K LA G+IAH+
Sbjct: 291 WRRRIERSLNMAQYAVDRFQSAGIDAWRNKNSITVVFPCP-SEAVWKKHCLATSGDIAHL 349
Query: 68 VVMP-NVTIEKLDDFLNELV 86
+ ++ K+D +++++
Sbjct: 350 IATAHHLDSSKIDALIDDVI 369
>UniRef100_P28577 Histidine decarboxylase [Enterobacter aerogenes]
Length = 377
Score = 42.0 bits (97), Expect = 0.003
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
+ + + L A Y DR AGI A+ ++ S TVVF +P E +K LA GN+AH+
Sbjct: 291 WHRRIGHSLNMAKYAVDRFKAAGIDALCHKNSITVVFPKP-SEWVWKKHCLATSGNVAHL 349
Query: 68 VV----MPNVTIEKL-DDFLNELVQKRA 90
+ + + I+ L DD + +L Q+ A
Sbjct: 350 ITTAHHLDSSRIDALIDDVIADLAQRAA 377
>UniRef100_Q98A07 Histidine decarboxylase [Rhizobium loti]
Length = 369
Score = 40.4 bits (93), Expect = 0.009
Identities = 24/73 (32%), Positives = 39/73 (52%), Gaps = 2/73 (2%)
Query: 13 QKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPN 72
Q+C R A Y D L G+ A N + TVV P ++ KWQ+A + +++H+VV P
Sbjct: 294 QQCERLAAYTADELNVRGVSAWRNPNALTVVLP-PVEDSIKTKWQIATQ-DVSHLVVTPG 351
Query: 73 VTIEKLDDFLNEL 85
T ++ D + +
Sbjct: 352 TTKQQADALIETI 364
>UniRef100_Q846V2 Putative pyridoxal 5' phosphate-dependent histidine decarboxylase
[Photobacterium phosphoreum]
Length = 380
Score = 37.7 bits (86), Expect = 0.060
Identities = 25/81 (30%), Positives = 43/81 (52%), Gaps = 2/81 (2%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRKWQLACKGNIAHV 67
F++ + + L A + RL AGI A N+ S TVVF P E +K LA G AH+
Sbjct: 292 FKRRINRSLDLAQHAVQRLQSAGINAWCNKNSITVVFPCP-SEAVWKKHCLATSGGQAHL 350
Query: 68 VVMP-NVTIEKLDDFLNELVQ 87
+ ++ K+D ++++++
Sbjct: 351 ITTAHHLDASKVDALIDDVIK 371
>UniRef100_Q64ZP5 Arylsulfatase regulator [Bacteroides fragilis]
Length = 459
Score = 33.5 bits (75), Expect = 1.1
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 74 TIEKLDDFLNELVQKRATWFEYGTFQPYC--IASDVGENS 111
TI +LD+ L K+ W+ Y TF PYC + D+ ENS
Sbjct: 255 TISRLDELF--LFFKQKGWYRYRTFAPYCALLRKDIEENS 292
>UniRef100_Q64DQ8 Group II decarboxylase [uncultured archaeon GZfos17F1]
Length = 374
Score = 33.5 bits (75), Expect = 1.1
Identities = 20/86 (23%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 8 FEKEVQKCLRNAHYFKDRLIEAGIGAMLNELSSTVVFERPHDEEFIRK------WQLACK 61
+E+ VQ+C+ + R E+GI +++ +++ +V + P D + +R W ++
Sbjct: 280 YERIVQRCMELTYELVARASESGIEPLIDPVTNVLVLDVP-DADSVRSALKKRGWDVSIT 338
Query: 62 GN--IAHVVVMPNVTIEKLDDFLNEL 85
+ +V+MP+++ E L+ F ++L
Sbjct: 339 RDPRALRLVIMPHISSENLNLFADDL 364
>UniRef100_Q8KCG8 Methionyl-tRNA formyltransferase [Chlorobium tepidum]
Length = 314
Score = 32.7 bits (73), Expect = 1.9
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 18 NAHYFKDRLIEAGIGAM---LNELSSTVVFERPHDEEFIRKWQLACKGNIAHVVVMPNVT 74
NA RL E G G + L ++ V DE F K A K N + + N
Sbjct: 164 NAFELLKRLSEIGAGTVERTLTMIADGAVMPEKQDERFATK---APKLNRENTRIDWNQP 220
Query: 75 IEKLDDFLNELVQKRATWFEYG 96
+++L DF+ L K A W +G
Sbjct: 221 VQRLHDFIRGLALKPAAWTTFG 242
>UniRef100_UPI00003ACBC5 UPI00003ACBC5 UniRef100 entry
Length = 459
Score = 32.3 bits (72), Expect = 2.5
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 7 SFEKEVQKCLRNAHYFKDRLIEA-----GIGAMLNELSSTVVFERPHDEEFIRKWQLACK 61
+++ ++ CL+N F D A G GA+L +L V ++RPH F + C
Sbjct: 4 NYQALLEMCLKNKQLFTDESFPADISSIGTGAILKKLPRNVQWKRPHASLFSQPHVSVCL 63
Query: 62 G 62
G
Sbjct: 64 G 64
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.324 0.138 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 206,310,972
Number of Sequences: 2790947
Number of extensions: 7307407
Number of successful extensions: 20898
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 20871
Number of HSP's gapped (non-prelim): 29
length of query: 124
length of database: 848,049,833
effective HSP length: 100
effective length of query: 24
effective length of database: 568,955,133
effective search space: 13654923192
effective search space used: 13654923192
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 67 (30.4 bits)
Medicago: description of AC136472.17