BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC136286.5 + phase: 1 /partial
         (107 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q9M9S3 F14L17.18 protein [Arabidopsis thaliana]              90  1e-17
UniRef100_Q9LL85 DNA-binding protein p24 [Solanum tuberosum]           82  3e-15
UniRef100_Q66GR6 At2g02740 [Arabidopsis thaliana]                      82  3e-15
UniRef100_Q5VP52 Putative DNA-binding protein p24 [Oryza sativa]       73  2e-12
UniRef100_Q8VYF7 Hypothetical protein At1g71260 [Arabidopsis tha...    67  1e-10
UniRef100_Q6ET43 Putative Chain C, Structure Of The Plant Transc...    59  3e-08
UniRef100_UPI00002AFFFB UPI00002AFFFB UniRef100 entry                  46  2e-04
UniRef100_O64508 Hypothetical protein At2g02740 [Arabidopsis tha...    33  2.1
UniRef100_UPI000032B784 UPI000032B784 UniRef100 entry                  32  4.6

>UniRef100_Q9M9S3 F14L17.18 protein [Arabidopsis thaliana]
          Length = 263

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 40/63 (63%), Positives = 49/63 (77%)

Query: 3   LPARVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNR 62
           LPAR +V  S+YKGKA L V P  P+F + DSG FK+SK+G +LLQF PSAG RQYDW++
Sbjct: 77  LPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSK 136

Query: 63  KQV 65
           KQV
Sbjct: 137 KQV 139


>UniRef100_Q9LL85 DNA-binding protein p24 [Solanum tuberosum]
          Length = 274

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 37/65 (56%), Positives = 48/65 (72%)

Query: 1   GELPARVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDW 60
           G    +V V  S+YKGKA L V P  P+F+  DSG FK+S+EG+++LQF P+AG RQYDW
Sbjct: 86  GASTPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDW 145

Query: 61  NRKQV 65
           +RKQV
Sbjct: 146 SRKQV 150


>UniRef100_Q66GR6 At2g02740 [Arabidopsis thaliana]
          Length = 268

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 35/60 (58%), Positives = 46/60 (76%)

Query: 6   RVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNRKQV 65
           R +V  S+YKGKA L + P  P+F + +SG FK++KEG +LLQF P+AG RQYDW+RKQV
Sbjct: 84  RFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQV 143


>UniRef100_Q5VP52 Putative DNA-binding protein p24 [Oryza sativa]
          Length = 272

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 35/73 (47%), Positives = 46/73 (62%), Gaps = 2/73 (2%)

Query: 1   GELPARVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDW 60
           G+   RV  + S+YKGKA + + P  P+F   DSG +K+ KEG +LLQF P+   RQYDW
Sbjct: 86  GQQNGRVFSTYSIYKGKAAMSLDPRPPQFVPLDSGAYKVVKEGFVLLQFAPAVATRQYDW 145

Query: 61  NRKQVSYCSFIIW 73
            RKQV   S  +W
Sbjct: 146 TRKQV--FSLSVW 156


>UniRef100_Q8VYF7 Hypothetical protein At1g71260 [Arabidopsis thaliana]
          Length = 238

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 28/59 (47%), Positives = 40/59 (67%)

Query: 6   RVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNRKQ 64
           R+    S++KGKA L V PVLP FT  DSG  +I + G +++ F+P+ G R+YDW +KQ
Sbjct: 53  RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQ 111


>UniRef100_Q6ET43 Putative Chain C, Structure Of The Plant Transcriptional Regulator
           Pbf-2 [Oryza sativa]
          Length = 228

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 25/60 (41%), Positives = 42/60 (69%)

Query: 6   RVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNRKQV 65
           R   S +V+KGKA L + P+LP F+  +SG  +++K G ++L F P+ G R+YD+++KQ+
Sbjct: 45  RKFASYTVFKGKAALSMQPILPSFSKLESGGSRVNKNGSVMLTFFPAVGQRKYDYSKKQL 104


>UniRef100_UPI00002AFFFB UPI00002AFFFB UniRef100 entry
          Length = 175

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 22/60 (36%), Positives = 33/60 (54%)

Query: 5   ARVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNRKQ 64
           +RV+   +VYK KA      + P F     G+    ++G +LL+  P+ G RQYDW +KQ
Sbjct: 115 SRVYCDYAVYKSKAAAKFQVIKPTFEVKPDGSRAKKRDGGVLLEMAPAVGPRQYDWAQKQ 174


>UniRef100_O64508 Hypothetical protein At2g02740 [Arabidopsis thaliana]
          Length = 192

 Score = 32.7 bits (73), Expect = 2.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)

Query: 6   RVHVSRSVYKGKAVLVVSPVLPKFTSSDSGTFKIS 40
           R +V  S+YKGKA L + P  P+F + +    KI+
Sbjct: 84  RFYVGHSIYKGKAALTIEPRAPEFVALEIVMMKIN 118


>UniRef100_UPI000032B784 UPI000032B784 UniRef100 entry
          Length = 234

 Score = 31.6 bits (70), Expect = 4.6
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 5/83 (6%)

Query: 24  PVLPKFTSSDSGTFKISKEGLMLLQFVPSAGFRQYDWNRKQVSYCSFIIWCWQHIRYLYS 83
           P++  FT ++  TF+ SK G++L+ F    GF     N  +V    F I     IR ++S
Sbjct: 42  PLIAIFTETE--TFENSKYGIILINFFDYVGFHNISDNLVEVIIVGFFILFL--IRTIFS 97

Query: 84  LEF-RFYRCCQALHIISKRSFFW 105
           + F +F     A  II+ +S F+
Sbjct: 98  ILFIQFQNLISAKLIINIQSKFY 120


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.331    0.142    0.478 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,914,684
Number of Sequences: 2790947
Number of extensions: 6084121
Number of successful extensions: 12786
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12778
Number of HSP's gapped (non-prelim): 9
length of query: 107
length of database: 848,049,833
effective HSP length: 83
effective length of query: 24
effective length of database: 616,401,232
effective search space: 14793629568
effective search space used: 14793629568
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 68 (30.8 bits)