BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135565.5 + phase: 0 /pseudo
(93 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q5W673 Putative helicase [Oryza sativa] 97 7e-20
UniRef100_Q65XV4 Hypothetical protein P0016H04.14 [Oryza sativa] 97 7e-20
UniRef100_Q9LX60 Hypothetical protein F4M19_60 [Arabidopsis thal... 87 1e-16
UniRef100_Q9LTU4 Helicase-like protein [Arabidopsis thaliana] 86 2e-16
UniRef100_Q9C925 Hypothetical protein F14G24.23 [Arabidopsis tha... 86 3e-16
UniRef100_Q9C7W5 Hypothetical protein F15H21.18 [Arabidopsis tha... 85 4e-16
UniRef100_Q6AUR0 Hypothetical protein OSJNBa0077L08.8 [Oryza sat... 85 4e-16
UniRef100_Q8LRG5 Putative helicase [Oryza sativa] 85 4e-16
UniRef100_Q9LIU0 Similar to Arabidopsis thaliana chromosome II B... 85 5e-16
UniRef100_Q9ZQR0 Putative helicase [Arabidopsis thaliana] 84 1e-15
UniRef100_Q8RV60 Hypothetical protein At2g05640 [Arabidopsis tha... 83 2e-15
UniRef100_Q9SH75 Putative helicase [Arabidopsis thaliana] 83 2e-15
UniRef100_Q94LS7 Putative helicase [Oryza sativa] 82 4e-15
UniRef100_Q9LW42 Helicase-like protein [Arabidopsis thaliana] 81 5e-15
UniRef100_Q7XDN7 Hypothetical protein [Oryza sativa] 81 5e-15
UniRef100_Q94LS3 Putative helicase [Oryza sativa] 81 5e-15
UniRef100_Q9SI21 Putative helicase [Arabidopsis thaliana] 81 7e-15
UniRef100_Q9M184 Hypothetical protein T5C2_50 [Arabidopsis thali... 79 2e-14
UniRef100_Q7XW15 OSJNBb0013O03.3 protein [Oryza sativa] 79 2e-14
UniRef100_Q9M3G2 Hypothetical protein T14K23_50 [Arabidopsis tha... 79 4e-14
>UniRef100_Q5W673 Putative helicase [Oryza sativa]
Length = 1634
Score = 97.4 bits (241), Expect = 7e-20
Identities = 44/92 (47%), Positives = 65/92 (69%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M NR CF ALD++LR+++ S+ +DN TKPFGG VL GDFRQ+LPVVR R QIV+++
Sbjct: 1267 MANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRRTQIVNAS 1326
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQEE 92
+ S +W+ + +LT NM LS + + D+++
Sbjct: 1327 IKRSYLWQHFHIFKLTRNMRLSCISRDEDEQK 1358
>UniRef100_Q65XV4 Hypothetical protein P0016H04.14 [Oryza sativa]
Length = 1525
Score = 97.4 bits (241), Expect = 7e-20
Identities = 44/92 (47%), Positives = 65/92 (69%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M NR CF ALD++LR+++ S+ +DN TKPFGG VL GDFRQ+LPVVR R QIV+++
Sbjct: 1158 MANRICFEALDRSLRDILRSKGEDNSTKPFGGMTVVLGGDFRQILPVVRKGRRTQIVNAS 1217
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQEE 92
+ S +W+ + +LT NM LS + + D+++
Sbjct: 1218 IKRSYLWQHFHIFKLTRNMRLSCISRDEDEQK 1249
>UniRef100_Q9LX60 Hypothetical protein F4M19_60 [Arabidopsis thaliana]
Length = 1752
Score = 87.0 bits (214), Expect = 1e-16
Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM++FCF +LDK+ +++ NKDNK FGGKV V GDFRQVLPV+ A R +IV S+
Sbjct: 1383 MMSKFCFESLDKSFYDILN--NKDNKV--FGGKVVVFGGDFRQVLPVINGAGRVEIVMSS 1438
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQ 90
+NAS +W C+VL+LT NM L + ++++
Sbjct: 1439 LNASYLWDHCKVLKLTKNMRLLSGGLSSEE 1468
>UniRef100_Q9LTU4 Helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 85.9 bits (211), Expect = 2e-16
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 4/90 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM++FCF ALDK+ +++ + DNK FGGKV V GDFRQVLPV+ A R +IV S+
Sbjct: 1060 MMSKFCFEALDKSFSDII--KRVDNKV--FGGKVMVFGGDFRQVLPVINGAGRAEIVMSS 1115
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQ 90
+NAS +W C+VLRLT NM L + + D+
Sbjct: 1116 LNASYLWDHCKVLRLTKNMRLLNNDLSVDE 1145
>UniRef100_Q9C925 Hypothetical protein F14G24.23 [Arabidopsis thaliana]
Length = 996
Score = 85.5 bits (210), Expect = 3e-16
Identities = 42/81 (51%), Positives = 57/81 (69%), Gaps = 4/81 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM++ CF +LD+TLR++M + KPFGGK V GDFRQVLPV+ A R++IV +A
Sbjct: 655 MMSKHCFESLDRTLRDIMNNPGD----KPFGGKGIVFGGDFRQVLPVINGAGREEIVFAA 710
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+N+S +W C+VL LT NM L
Sbjct: 711 LNSSYIWEHCKVLELTKNMRL 731
>UniRef100_Q9C7W5 Hypothetical protein F15H21.18 [Arabidopsis thaliana]
Length = 753
Score = 85.1 bits (209), Expect = 4e-16
Identities = 42/81 (51%), Positives = 57/81 (69%), Gaps = 4/81 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM++ CF +LD+TLR++M + KPFGGKV V GDFRQVL V+ A R++IV +A
Sbjct: 633 MMSKHCFESLDRTLRDIMNNPGD----KPFGGKVIVFGGDFRQVLSVINGAGREEIVFAA 688
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+N+S +W C+VL LT NM L
Sbjct: 689 LNSSYIWEHCKVLELTKNMRL 709
>UniRef100_Q6AUR0 Hypothetical protein OSJNBa0077L08.8 [Oryza sativa]
Length = 807
Score = 85.1 bits (209), Expect = 4e-16
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 3 NRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSAVN 62
+++CF +LD+TLR+++ N ++ K FGG VL GDFRQ LPV++ AT+QQI+ S +
Sbjct: 429 HKYCFESLDRTLRDILSETNPNSLDKQFGGITVVLGGDFRQTLPVIQNATKQQILRSCIV 488
Query: 63 ASKVWRRCEVLRLTMNMGLSTANNNA-DQEEV 93
S +W +C ++ LT NM L++A+ +A D+EE+
Sbjct: 489 NSYLWNKCILIELTENMRLTSASISAQDREEL 520
>UniRef100_Q8LRG5 Putative helicase [Oryza sativa]
Length = 1453
Score = 85.1 bits (209), Expect = 4e-16
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M +R CF ALD+TLR+++ N N PFGGK VL GDFRQ+LPV++ TR IV ++
Sbjct: 1066 MTHRRCFEALDRTLRDLLSEHNPSNSVLPFGGKFVVLGGDFRQILPVIKKGTRNSIVDAS 1125
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+ S +W+ +L+LT+NM L
Sbjct: 1126 ITNSPLWQHVVLLKLTVNMRL 1146
>UniRef100_Q9LIU0 Similar to Arabidopsis thaliana chromosome II BAC T13P21 genomic
sequence [Oryza sativa]
Length = 1278
Score = 84.7 bits (208), Expect = 5e-16
Identities = 41/92 (44%), Positives = 58/92 (62%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M +R CF ALD+TLR+++ N PFGGKV VL GDFRQ+LPVVR +R I+ ++
Sbjct: 874 MTHRRCFEALDRTLRDLLSEHAPSNGLVPFGGKVVVLGGDFRQILPVVRKGSRASIIDAS 933
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQEE 92
+ S +W +L+LT+NM L N Q++
Sbjct: 934 ITNSPLWSHAVLLKLTVNMRLLQCNLGEQQQQ 965
>UniRef100_Q9ZQR0 Putative helicase [Arabidopsis thaliana]
Length = 1265
Score = 83.6 bits (205), Expect = 1e-15
Identities = 47/91 (51%), Positives = 62/91 (67%), Gaps = 5/91 (5%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM+RFCF ALDK+ +++ +N DN FGGKV V GDFRQV PV+ A R +IV S+
Sbjct: 913 MMSRFCFEALDKSFSDII--KNTDNTV--FGGKVVVFGGDFRQVFPVINGAGRAEIVMSS 968
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQE 91
+NAS +W C+VL+LT N L ANN ++ E
Sbjct: 969 LNASYLWDNCKVLKLTKNTRL-LANNLSETE 998
>UniRef100_Q8RV60 Hypothetical protein At2g05640 [Arabidopsis thaliana]
Length = 1308
Score = 82.8 bits (203), Expect = 2e-15
Identities = 37/89 (41%), Positives = 60/89 (66%), Gaps = 4/89 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M++R C+ ALD+TL++++ ++N KPFGGK GDFRQ+LPV+ +R+QI+ ++
Sbjct: 938 MLHRHCYEALDRTLKDIVQADNH----KPFGGKTITFGGDFRQILPVITKGSREQIIHAS 993
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNAD 89
+ +S++W C+VL LT NM L+ D
Sbjct: 994 LTSSRLWNSCKVLTLTKNMRLTADPTEKD 1022
>UniRef100_Q9SH75 Putative helicase [Arabidopsis thaliana]
Length = 1241
Score = 82.8 bits (203), Expect = 2e-15
Identities = 44/81 (54%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM+R+CF +LD++L +V+G N D K PFGGKV V GDFRQVL V+ A R +IV +A
Sbjct: 958 MMSRYCFESLDRSLNDVIG--NVDGK--PFGGKVVVFGGDFRQVLHVIHGAGRAEIVLAA 1013
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+N+S +W C VL LT NM L
Sbjct: 1014 LNSSYLWEHCNVLTLTKNMSL 1034
>UniRef100_Q94LS7 Putative helicase [Oryza sativa]
Length = 1573
Score = 81.6 bits (200), Expect = 4e-15
Identities = 42/92 (45%), Positives = 59/92 (63%), Gaps = 2/92 (2%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M NR CF ALDK+LR+V N+++ KPFGG VL GDFRQ+LP+V R+ V+++
Sbjct: 1205 MANRNCFEALDKSLRDVQRFRNENSYQKPFGGMTVVLGGDFRQILPIVPKGRREHTVNAS 1264
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQEE 92
+ S +W+ EV LT NM L++ + DQ E
Sbjct: 1265 IKFSYLWQHFEVFNLTKNMRLNSVSK--DQAE 1294
>UniRef100_Q9LW42 Helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 81.3 bits (199), Expect = 5e-15
Identities = 36/81 (44%), Positives = 59/81 (72%), Gaps = 4/81 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM+++CF +LDK+L++++ + + PFGGK+ + GDFRQ+LPV+ A R+ IV S+
Sbjct: 1304 MMSKYCFESLDKSLKDILSTP----EDMPFGGKLIIFGGDFRQILPVILAAGRELIVKSS 1359
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+N+S +W+ C+V +LT NM L
Sbjct: 1360 LNSSHLWQYCKVFKLTKNMRL 1380
>UniRef100_Q7XDN7 Hypothetical protein [Oryza sativa]
Length = 1477
Score = 81.3 bits (199), Expect = 5e-15
Identities = 39/92 (42%), Positives = 57/92 (61%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M NR CF ALDK+LR+V N+++ KPFGG VL GDFRQ+LP+V R+ V++
Sbjct: 1109 MANRNCFEALDKSLRDVQRCRNENSCQKPFGGMTVVLGGDFRQILPIVPKGRREHTVNAT 1168
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQEE 92
+ S +W+ EV LT NM L+ + + + +
Sbjct: 1169 IKCSYLWQHFEVFNLTKNMRLNYVSKDQTEHQ 1200
>UniRef100_Q94LS3 Putative helicase [Oryza sativa]
Length = 1501
Score = 81.3 bits (199), Expect = 5e-15
Identities = 39/92 (42%), Positives = 57/92 (61%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M NR CF ALDK+LR+V N+++ KPFGG VL GDFRQ+LP+V R+ V++
Sbjct: 1133 MANRNCFEALDKSLRDVQRCRNENSCQKPFGGMTVVLGGDFRQILPIVPKGRREHTVNAT 1192
Query: 61 VNASKVWRRCEVLRLTMNMGLSTANNNADQEE 92
+ S +W+ EV LT NM L+ + + + +
Sbjct: 1193 IKCSYLWQHFEVFNLTKNMRLNYVSKDQTEHQ 1224
>UniRef100_Q9SI21 Putative helicase [Arabidopsis thaliana]
Length = 1219
Score = 80.9 bits (198), Expect = 7e-15
Identities = 44/81 (54%), Positives = 56/81 (68%), Gaps = 4/81 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM+R CF +LD++L ++ G N DNK PFGGKV V GDFRQVLPV+ A IV +A
Sbjct: 858 MMSRHCFESLDRSLSDICG--NCDNK--PFGGKVVVFGGDFRQVLPVIPGADTADIVMAA 913
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+N+S +W C+VL LT NM L
Sbjct: 914 LNSSYLWSHCKVLTLTKNMCL 934
>UniRef100_Q9M184 Hypothetical protein T5C2_50 [Arabidopsis thaliana]
Length = 830
Score = 79.3 bits (194), Expect = 2e-14
Identities = 39/81 (48%), Positives = 56/81 (68%), Gaps = 4/81 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM++ CF +LD+TL++++ + KP GGKV V GDFRQVLPV+ A R++IV +A
Sbjct: 287 MMSKHCFESLDRTLKDIVNNPGD----KPLGGKVIVFGGDFRQVLPVINGAGREEIVFAA 342
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+N+S +W +VL LT NM L
Sbjct: 343 LNSSYIWEHSKVLELTKNMRL 363
>UniRef100_Q7XW15 OSJNBb0013O03.3 protein [Oryza sativa]
Length = 2052
Score = 79.3 bits (194), Expect = 2e-14
Identities = 37/81 (45%), Positives = 54/81 (65%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
M +R CF ALD+TLR+++ + N PFGGKV VL GDFRQ+LPV++ +R I ++
Sbjct: 1043 MTHRLCFEALDRTLRDLLSEHDPANAIVPFGGKVIVLGGDFRQILPVIQKGSRASIDDAS 1102
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+ S +WR ++L L +NM L
Sbjct: 1103 ITNSPLWRHVKLLSLKINMRL 1123
>UniRef100_Q9M3G2 Hypothetical protein T14K23_50 [Arabidopsis thaliana]
Length = 244
Score = 78.6 bits (192), Expect = 4e-14
Identities = 40/81 (49%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 1 MMNRFCFVALDKTLRNVMGSENKDNKTKPFGGKVFVLVGDFRQVLPVVRVATRQQIVSSA 60
MM++ CF +LD+TLR+ M + + KPFGGKV V GDFRQVL V+ A R++IV +A
Sbjct: 1 MMSKHCFESLDRTLRDFMNNL----EDKPFGGKVIVFGGDFRQVLLVINGAGREEIVFAA 56
Query: 61 VNASKVWRRCEVLRLTMNMGL 81
+N+S +W C+V LT M L
Sbjct: 57 LNSSYIWEHCKVFELTKKMKL 77
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.322 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,822,013
Number of Sequences: 2790947
Number of extensions: 4310034
Number of successful extensions: 8058
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 7949
Number of HSP's gapped (non-prelim): 115
length of query: 93
length of database: 848,049,833
effective HSP length: 69
effective length of query: 24
effective length of database: 655,474,490
effective search space: 15731387760
effective search space used: 15731387760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC135565.5