BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135416.15 - phase: 0 /pseudo
         (662 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q7XRT2 OSJNBa0042F21.11 protein [Oryza sativa]              326  1e-87
UniRef100_Q7G6J5 Putative polyprotein [Oryza sativa]                  266  2e-69
UniRef100_Q9SHM3 F7F22.17 [Arabidopsis thaliana]                      265  4e-69
UniRef100_Q9SHM5 F7F22.15 [Arabidopsis thaliana]                      263  2e-68
UniRef100_Q9FZN9 Retroelement pol polyprotein-like [Arabidopsis ...   258  4e-67
UniRef100_Q7FZN4 T17A2.3 protein [Arabidopsis thaliana]               248  4e-64
UniRef100_Q7Y1N4 Putative retrotransposon gag protein [Oryza sat...   232  2e-59
UniRef100_Q7XLB2 OSJNBa0011K22.17 protein [Oryza sativa]              226  2e-57
UniRef100_Q6F2G0 Hypothetical protein OSJNBa0083K01.26 [Oryza sa...   222  3e-56
UniRef100_Q7F9Z3 OSJNBa0079C19.24 protein [Oryza sativa]              188  4e-46
UniRef100_Q7XLB4 OSJNBa0011K22.15 protein [Oryza sativa]              156  2e-36
UniRef100_Q9LH13 Similarity to Athila retroelement ORF1 protein ...   155  4e-36
UniRef100_Q9C8Q7 Athila ORF 1, putative; 43045-40843 [Arabidopsi...   152  2e-35
UniRef100_Q8LM79 Hypothetical protein OSJNAa0082N11.11 [Oryza sa...   151  7e-35
UniRef100_Q8S6J2 Hypothetical protein OSJNBa0019N10.34 [Oryza sa...   151  7e-35
UniRef100_Q6UUB7 Hypothetical protein [Oryza sativa]                  150  9e-35
UniRef100_O22104 Vicia faba mRNA expressed from retrotransposon-...   148  4e-34
UniRef100_Q8S618 Hypothetical protein OSJNBb0048O22.17 [Oryza sa...   148  6e-34
UniRef100_Q7XF80 Hypothetical protein [Oryza sativa]                  146  2e-33
UniRef100_Q9MA70 F2J6.11 protein [Arabidopsis thaliana]               145  3e-33

>UniRef100_Q7XRT2 OSJNBa0042F21.11 protein [Oryza sativa]
          Length = 920

 Score =  326 bits (836), Expect = 1e-87
 Identities = 223/629 (35%), Positives = 326/629 (51%), Gaps = 58/629 (9%)

Query: 38  EAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRFNQ 97
           +AVRL LFPFSL  RA+ WF++    +I +WD    +FL++FFP  KT  LR +I+RF Q
Sbjct: 298 DAVRLRLFPFSLLRRAKQWFYA-NCAAINTWDKCSTSFLSKFFPIGKTNALRGRISRFQQ 356

Query: 98  KDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKNHT 157
              E + EAWER +E +  CPHHG++ WLI+  FYNGL+  ++  +DAAA GA  +K   
Sbjct: 357 TRDESIPEAWERLQEYVAACPHHGMDDWLILQNFYNGLTLMSRDHLDAAAGGAFFSKTVQ 416

Query: 158 EAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQ---KFEKL 214
            A  LIE M  N   W+ ER  T      ++ G++ V E   LAAK++ L +     EK 
Sbjct: 417 GAVELIEKMVSNT-GWSKERLQT------RQRGMHTVKETELLAAKLDLLMKCLDDHEKR 469

Query: 215 NVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRPNQKFYKNPQGS 274
               V    +   CE+CG +GH G DC        E+  Y   N   RP        QG 
Sbjct: 470 PQGTVKALDSHVTCEVCGGTGHSGNDC----LETHEEAMYMGKNNEYRP--------QGG 517

Query: 275 YGQVAP----PGYTNNQRVAKKSSLEILLENCIANQNKNLQELKNQTGFLNGSLSKLTTK 330
            G   P    PG  NN   + + SL  L    +  Q K    L+ +    +  L  +  K
Sbjct: 518 EGWNQPRPYYPGGNNNGNFSNQPSLMDL----VFAQAKTTDALRKKLAANDKILENINVK 573

Query: 331 VDSIAT-------HTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAHVNAIFLGGSK 383
           +D  A+         KM++TQ++Q+A  V  +    G  PGQP+++ + +V AI   G K
Sbjct: 574 LDGFASAFQNQLSFNKMIETQLAQLASLVPANES--GRIPGQPDSSIE-NVKAITTRGGK 630

Query: 384 LEE-----TVAKAKSVKGESVKCLGKKGVIESEKLLDKDKALT-----PLRLTKLNLVTQ 433
                     A    +  E+         I+ +K + ++   T     P +  K ++  Q
Sbjct: 631 STRDPPYPNPAGTNGMSKETPSTDSDDKEIQPDKTVPQEYCDTRLLPFPQQSRKPSVDKQ 690

Query: 434 FTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRE-NSAIIKK 492
           F  F+ ++QKI I +P  +A+ ++P YA++LK+I + K+ +   E   LT   ++ I+ K
Sbjct: 691 FACFVEVIQKIHINVPLLDAM-QVPTYARYLKDILNNKRPLPTTEVVKLTEHCSNLILHK 749

Query: 493 PPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETTLKLAD 552
            P K +DPG   I C IG++  +QALCDLGASVS++P  +F +L    L  T   L+LAD
Sbjct: 750 LPEKKKDPGCPTITCSIGAQQFDQALCDLGASVSVMPKDVFDKLNFTVLAPTPMRLQLAD 809

Query: 553 RSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQNGRI 612
            S   PVG  ED+P KI    IP DF+VLD+D   E P+ILGRPFL+TAGA +DV  G I
Sbjct: 810 SSVHYPVGIAEDVPAKIRDFFIPVDFVVLDMDTGKETPLILGRPFLSTAGANIDVGTGSI 869

Query: 613 IFQVSDELIGFELENYMKGPALYSCNVIK 641
            F  + +   FE +     P +  C +++
Sbjct: 870 RFHTNGKEEKFEFQ-----PRMEQCTMVR 893


>UniRef100_Q7G6J5 Putative polyprotein [Oryza sativa]
          Length = 689

 Score =  266 bits (679), Expect = 2e-69
 Identities = 197/612 (32%), Positives = 289/612 (47%), Gaps = 78/612 (12%)

Query: 38  EAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRFNQ 97
           + V+L LFPFSL  RA+ WF++    ++ +WD    AFL++FFP                
Sbjct: 75  DVVKLRLFPFSLLGRAKQWFYANRT-AVNTWDKCSTAFLSKFFP---------------- 117

Query: 98  KDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKNHT 157
                  EAWER +E +  CPH G++ WLI+  FYNGL+  ++  +DAAA GA  +K   
Sbjct: 118 ------MEAWERLQEYVAACPHLGMDDWLILQNFYNGLTPMSRDHLDAAARGAFFSKTVQ 171

Query: 158 EAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQKF---EKL 214
            A  LIE M  N   W+ ER  T      ++ G++ V E   LAAK++ L ++    EK 
Sbjct: 172 GAVELIEKMVSN-MGWSEERLQT------RQRGMHTVKETELLAAKLDLLMKRLDDHEKG 224

Query: 215 NVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRPNQKFYKNPQGS 274
               V    +   CE+CG +GH G DC        E+  Y   N G  P        QG 
Sbjct: 225 PQRTVKALDSHVMCEVCGNTGHSGNDC----LETCEEAMYMGNNNGYCP--------QGG 272

Query: 275 YGQVAPPGY----TNNQRVAKKSSLEILLENCIANQNKNLQELKNQTGFLNGSLSKLTTK 330
            G   P  Y     NN     + SL+ L    +  Q K    L  +    N  L+ L   
Sbjct: 273 QGWNQPRPYYQGGNNNSNFPNQPSLKDL----VFAQAKTTDALSKKLA-ANDKLASLVP- 326

Query: 331 VDSIATHTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAHVNAIFLGGSKLEETVAK 390
               A  T  +  Q     + V   +   G     P        N I  G    +     
Sbjct: 327 ----ANETGRIPGQPDPSIENVKAITMRRGKSTRDPPYPNPVGTNEISKGAPSNDSA--- 379

Query: 391 AKSVKGESVKCLGKKGVIESEKLLDKDKALTPLRLTKLNLVTQFTKFLNILQKICIKIPF 450
            K V+ E+            ++  D      P R+ K ++  QF +F+ ++QKI I +P 
Sbjct: 380 DKEVQPENTV---------PQEYCDTRLLSFPQRMRKPSVDEQFARFVEVIQKIHINVPL 430

Query: 451 AEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRE-NSAIIKKPPTKLRDPGSFAIPCMI 509
            +A+ ++P YA++LK+I + K+ +   E   LT + ++ I+ K P K +DPG   I C I
Sbjct: 431 LDAM-QVPTYARYLKDILNNKRPLPTTEVVKLTEQCSNLILHKLPEKKKDPGCPTITCSI 489

Query: 510 GSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETTLKLADRSDIQPVGNVEDIPVKI 569
           G++  +Q  C+LGASVS++   +F +L    L  T   L+LAD S   P G  ED+PVKI
Sbjct: 490 GAQQFDQVSCNLGASVSVVLKDVFDKLNFTVLAPTPMRLQLADSSVRYPAGIAEDVPVKI 549

Query: 570 EGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQNGRIIFQVSDELIGFELENYM 629
               IP DF+VLD+D   E P+ILGRPFL+TAGA +DV  G I F ++ +   FE +   
Sbjct: 550 RDFFIPVDFVVLDMDTGKETPLILGRPFLSTAGANIDVGTGSIRFHINGKKEKFEFQ--- 606

Query: 630 KGPALYSCNVIK 641
             P    C++++
Sbjct: 607 --PRTEQCSMVR 616


>UniRef100_Q9SHM3 F7F22.17 [Arabidopsis thaliana]
          Length = 1799

 Score =  265 bits (676), Expect = 4e-69
 Identities = 217/708 (30%), Positives = 337/708 (46%), Gaps = 129/708 (18%)

Query: 36  NQEAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRF 95
           +++  +L LFPFSL D+A  W  +L   SIT+WDD ++ FL++FF  ++TA+LR++I+ F
Sbjct: 65  SEDGFKLRLFPFSLGDKAHIWEKNLPHDSITTWDDCKKVFLSKFFSNARTARLRNEISGF 124

Query: 96  NQKDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKN 155
           +QK GE   EAWERFK     CPHHG  K  ++ T Y G+    +M +D A+ G   NK+
Sbjct: 125 SQKTGESFCEAWERFKGYTNQCPHHGFTKASLLSTLYRGVLPRIRMLLDTASNGNFQNKD 184

Query: 156 HTEAYSLIEDMAQN--HYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQKFEK 213
             E + L+E++AQ+  +Y    +R V   T    +    E+   N    ++     K   
Sbjct: 185 VEEGWELVENLAQSDGNYNEDCDRTVRG-TADSDDKHRKEIKALNDKLDRILLSQHKHVH 243

Query: 214 LNVN----AVTPSSASPPCEICGISGHIG--------------VDCQLGSAANIEQLNY- 254
             V+     V     +   E+  I+ + G              +  +  + AN +   Y 
Sbjct: 244 FLVDDEQYEVQDGEGNQLEEVSYINNNQGGYKGYNYFKTNNPNLSYRSTNVANPQDQVYP 303

Query: 255 -----------AQFNQGTRPNQKFYKNPQGSYGQVAPPGYTNNQR-------VAKKSSLE 296
                        +NQG  P Q+F    QG+Y Q  PPG+   Q           K  L+
Sbjct: 304 PQQQQSQNKPFVPYNQGFVPKQQF----QGNY-QQQPPGFAPPQHQGPAAPDADMKQMLQ 358

Query: 297 ILLE---NCIANQNKNLQELKNQTGFLNGSLSKLTTKVDSIATHTKMLKTQISQVAQQVA 353
            LL    +C     K + EL N+   L+ S + L  K++++ T  + L+   +  +    
Sbjct: 359 QLLHGQASCSMEMAKKISELHNK---LDCSYNDLNVKMETLDTKVRYLEGHSTSSSATKQ 415

Query: 354 TSSQTPGVFPGQPETNPKAHVNAIFLGGSKLEETVAKAKSVKGESVKCLGKKGVIESEKL 413
           TS       PG+   NPK + +AI L   K   T  + K+V  +S    G+      +  
Sbjct: 416 TSQ-----LPGKAVQNPKEYAHAITLRSGKALPTREEPKTVTEDSEDQDGE------DLS 464

Query: 414 LDKDKALTPLRLT---KLNLVTQ---------FTK------------------FLNILQK 443
           L+KD+A  PL L+    L+L  Q         FT+                   +   +K
Sbjct: 465 LEKDQADKPLDLSLEQPLDLSLQQSLDPPLDSFTRPTTRPVIPAASPTAPKPVAVKNKEK 524

Query: 444 ICIKIPFAEAL------------SRMPLYAKFLKEIFSKKKAID--------HNETK--- 480
           + +  P+   L                ++AK +KE+  +   +D        H   K   
Sbjct: 525 VFVPPPYKSQLPFPGRHKKALADKYRAMFAKNIKEVELRIPLVDALALIPDSHKFLKDLI 584

Query: 481 -----------ALTRENSAIIKKP--PTKLRDPGSFAIPCMIGSETLNQALCDLGASVSL 527
                       L+ E SAII+K   P KL DPGSF +PC +G    N+ LCDLGASVSL
Sbjct: 585 VERIQEVQGMVVLSHECSAIIQKKIIPKKLSDPGSFTLPCSLGPLAFNRCLCDLGASVSL 644

Query: 528 LPLPLF*RLGLGELKLTETTLKLADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDN 587
           +PL +  RLG  + K    +L LADRS   P G +E++P++I  ++IPTDF+VL++DE+ 
Sbjct: 645 MPLSVAKRLGFTQYKSCNISLILADRSVRIPHGLLENLPIRIGAVEIPTDFVVLEMDEEP 704

Query: 588 ECPIILGRPFLATAGAIVDVQNGRIIFQV-SDELIGFELENYMKGPAL 634
           + P+ILGRPFLATAGA++DV+ G+I   +  D  + F++++ MK P +
Sbjct: 705 KDPLILGRPFLATAGAMIDVKKGKIDLNLGKDFRMTFDVKDAMKKPTI 752


>UniRef100_Q9SHM5 F7F22.15 [Arabidopsis thaliana]
          Length = 1862

 Score =  263 bits (671), Expect = 2e-68
 Identities = 200/634 (31%), Positives = 315/634 (49%), Gaps = 108/634 (17%)

Query: 36  NQEAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRF 95
           +++  +L LFPFSL D+A  W  +L   SIT+WDD ++AFL++FF  ++TA+LR++I+ F
Sbjct: 200 SEDGFKLRLFPFSLGDKAHIWEKNLPHDSITTWDDCKKAFLSKFFSNARTARLRNEISGF 259

Query: 96  NQKDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKN 155
           +QK GE   EAWERFK     C HHG  K  ++ T Y G+    +M +D A+ G   NK+
Sbjct: 260 SQKTGESFCEAWERFKGYTNQCSHHGFTKASLLSTLYRGVLPRIRMLLDTASNGNFQNKD 319

Query: 156 HTEAYSLIEDMAQNH--YQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQKFEK 213
             E + L+E++AQ++  Y    +R V     S  +              +++AL  K ++
Sbjct: 320 VEEGWELVENLAQSNGNYNENCDRTVRGTADSDDKH-----------RKEIKALNDKLDR 368

Query: 214 LNVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRPNQKFYKNPQG 273
           + +        S    +  +      + Q G    +E+++Y   NQG     K Y N + 
Sbjct: 369 ILL--------SQHKHVHFLVDDEQYEVQDGEGNQLEEVSYINNNQG---GYKGYNNFK- 416

Query: 274 SYGQVAPPGYTNNQRVAKKSSLEILLENCIANQNKNLQELKNQTGFLNGSLSKLTTKVDS 333
                     TNN  ++ +S+        +AN    +   + Q      S +K     + 
Sbjct: 417 ----------TNNPNLSYRSTN-------VANPQDQVYPPQQQQ-----SQNKPFVPYNQ 454

Query: 334 IATHTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAHVNAIFLGGSKLEETVAKAKS 393
               T  L                     PG+   NPK + +AI L   K   T  + K+
Sbjct: 455 ATKQTSQL---------------------PGKAVQNPKEYAHAITLHSGKALPTREEPKT 493

Query: 394 VKGESVKCLGKKGVIESEKLLDKDKALTPLRLT---KLNLVTQ---------FTK----- 436
           V  +S    G+      +  L KD+A  PL L+    L+L  Q         FT+     
Sbjct: 494 VTEDSEDQDGE------DLSLKKDQADKPLDLSLEQPLDLSLQQSLDPPLDSFTRPTTRP 547

Query: 437 -------------FLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALT 483
                         +   +K+ ++IP  +AL+ +P   KFLK++  ++   +      L+
Sbjct: 548 VIPAASPTAPKPVAVKNKEKVELRIPLVDALALIPDSHKFLKDLIVERIQ-EVQGMVVLS 606

Query: 484 RENSAIIKKP--PTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGEL 541
            E SAII+K   P KL DPGSF +PC +G    N+ LCDLGASVSL+PL +  RLG  + 
Sbjct: 607 HECSAIIQKKIIPKKLSDPGSFTLPCSLGPLAFNRCLCDLGASVSLMPLSVAKRLGFTQY 666

Query: 542 KLTETTLKLADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATA 601
           K    +L LADRS   P G +E++P++I  ++IPTDF+VL++DE+ + P+ILGRPFLATA
Sbjct: 667 KSCNISLILADRSVRIPHGLLENLPIRIGAVEIPTDFVVLEMDEEPKDPLILGRPFLATA 726

Query: 602 GAIVDVQNGRIIFQV-SDELIGFELENYMKGPAL 634
           GA++DV+ G+I   +  D  + F++++ MK P +
Sbjct: 727 GAMIDVKKGKIDLNLGKDFRMTFDVKDAMKKPTI 760


>UniRef100_Q9FZN9 Retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1864

 Score =  258 bits (659), Expect = 4e-67
 Identities = 203/684 (29%), Positives = 329/684 (47%), Gaps = 97/684 (14%)

Query: 36  NQEAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRF 95
           +++  +L LFPFSL D+A  W  SL  GSITSW+D ++AFLA+FF  S+TA+LR+ I+ F
Sbjct: 114 SEDGFKLRLFPFSLGDKAHQWEKSLLQGSITSWNDCKKAFLAKFFSNSRTARLRNDISGF 173

Query: 96  NQKDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKN 155
            Q + E   EAWERFK     CPHHG  K  ++ T Y G+    +M +D A+ G  +NK+
Sbjct: 174 TQTNNETFCEAWERFKGYQTQCPHHGFSKASLLSTLYRGVLPKIRMLLDTASNGNFLNKD 233

Query: 156 HTEAYSLIEDMAQN--HYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQKF-- 211
             + + L+E++AQ+  +Y    +R+V   + S  E    E+   N    K+  + QK   
Sbjct: 234 VEDGWELVENLAQSDGNYNEDYDRSVRTSSDSD-EKHRREMKAMNDKLDKLLLVQQKHIH 292

Query: 212 -----EKLNVNAVTPSSASPPCEICGISG-----------HIGVDCQLGSAANIEQLNYA 255
                E   V       +     +    G           H  +  +  + AN +   Y 
Sbjct: 293 FLGDDETFQVQDGETMQSEEVSYVQNQGGYNKGFNNFKQNHPNLSYRSTNVANPQDQVYP 352

Query: 256 Q-----------FNQGTR--PNQKFYKNPQGSYG-QVAPPGYTNNQR----VAKKSSLEI 297
                       +NQG    P Q++    QG+Y  Q+ PPG+T  Q+        S L+ 
Sbjct: 353 SQQQNQPRPFVPYNQGQGYVPKQQY----QGNYQPQLPPPGFTQQQQQPASTTPDSDLKN 408

Query: 298 LLENCIANQNKNLQELKNQTGFLNG----SLSKLTTKVDSIATHTKMLKTQISQVAQQVA 353
           +L+  +  Q     +L  +   ++     S + +  KV+++ +  + ++ Q    A    
Sbjct: 409 MLQQILQGQATGAMDLSKRMAEIHNKVDCSYNDINIKVEALTSKIRYIEGQTGSTAAPKF 468

Query: 354 TSSQTPGVFPGQPETNPKAHVNAIFLGGSKLEETVAKAKSVKGESVKCLGK---KGVIES 410
           T      +      +N + + +AI L   K   T         +SV   G+   +    +
Sbjct: 469 TGPSRKSM------SNSEEYAHAITLRSGKELPTKESPNQNTEDSVDQDGEDFCQNGNSA 522

Query: 411 EKLLDKDKALTPLRL----------------TKLNLVT-----------------QFTKF 437
           EK +++     P RL                TK N+                      K+
Sbjct: 523 EKAIEEPILDQPTRLLAPAASPLVEKPAATKTKDNVFVPPPYKPPLPFPGRFKKVMIQKY 582

Query: 438 LNILQK----ICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRENSAIIKKP 493
             +L+K    + + +P  + L+ +P   K++K++ +++   +      L+ E SAII++ 
Sbjct: 583 KALLEKQLKNLEVTMPLVDCLALIPDSNKYVKDMITERIK-EVQGMVVLSHECSAIIQQK 641

Query: 494 --PTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETTLKLA 551
             P KL DPGSF +PC +G    N+ LCDLGASVSL+PL +  +LG  + K    +L LA
Sbjct: 642 IIPKKLGDPGSFTLPCALGPLAFNKCLCDLGASVSLMPLSVAKKLGFNKYKPCNISLILA 701

Query: 552 DRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQNGR 611
           DRS   P G +ED+PV I  +++PTDF+VL++DE+ + P+ILGRPFL T GAI+DV+ G+
Sbjct: 702 DRSVRIPHGLLEDLPVMIGMVEVPTDFVVLEMDEEPKDPLILGRPFLVTVGAIIDVKKGK 761

Query: 612 IIFQVSDEL-IGFELENYMKGPAL 634
           I   +  +L + F++ N MK P +
Sbjct: 762 IDLNLGRDLKMTFDITNTMKKPTI 785


>UniRef100_Q7FZN4 T17A2.3 protein [Arabidopsis thaliana]
          Length = 1428

 Score =  248 bits (633), Expect = 4e-64
 Identities = 184/624 (29%), Positives = 302/624 (47%), Gaps = 66/624 (10%)

Query: 36  NQEAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRF 95
           +++  +L LFPFSL D+A  W  +L   SIT+WDD ++AFL++FF  ++TA+LR++I  F
Sbjct: 82  SEDGFKLRLFPFSLGDKAHIWEKNLSHDSITTWDDYKKAFLSKFFSNARTARLRNEIYGF 141

Query: 96  NQKDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKN 155
           +QK GE   EAWERFK     CPHH   K  ++ T Y G+    +M +D A+ G   NK+
Sbjct: 142 SQKTGESFCEAWERFKGYTNQCPHHSFTKASLLSTLYRGVLPRIRMLLDTASNGNFQNKD 201

Query: 156 HTEAYSLIEDMAQN--HYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQKFEK 213
             E + L+E++AQ+  +Y    +R V   T    +    E+   N    ++    QK   
Sbjct: 202 VEEGWELVENLAQSDGNYNEDCDRTVRG-TADSDDKHRKEIKALNDKLDRILLSQQKHVH 260

Query: 214 LNVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRPNQKFYKNPQG 273
             V+           ++    G+   +  L      +   +  +NQG  P Q+F    QG
Sbjct: 261 FLVD-------DEQYQVQDGEGNQLEEVYLPQQKQGQNKPFVLYNQGFVPKQQF----QG 309

Query: 274 SYGQVAPPGYTNNQ---RVAKKSSLEILLENCIANQNKNLQELKNQTGFLNGSL----SK 326
           +Y    PPG+   Q     A  + ++ +++  +  Q  +  E+  +   L+  L    + 
Sbjct: 310 NYQPPPPPGFVTQQNQCHAAPDAKMKQMVKQLLQGQASSSMEIAKKLSELHHKLDCSYND 369

Query: 327 LTTKVDSIATHTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPK--------------- 371
           L  KV+++ T  + L+       Q  +T S      PG+   NPK               
Sbjct: 370 LNAKVEALNTKVRYLE------GQSASTFSPKVTRLPGKSIQNPKEYATAHAITICHDRE 423

Query: 372 ---AHVNAIFLGGSKLEETVAKAKSVKGESVKCLGKKGVIESEKLLDKDKAL-------- 420
               HV  +    + ++E  A  + V+   V+     G     +   ++KA         
Sbjct: 424 LPTRHVLDLITRDNDVQEGEASTQ-VEASVVEFNHSAGSRHLTQSTSEEKAAIIERMVKR 482

Query: 421 ---TPLRLTKLNLVTQ---FTKFLNI----LQKICIKIPFAEALSRMPLYAKFLKEIFSK 470
              TPL L  L    +     ++ ++    L +I   +P  E L+ +    K ++ +  +
Sbjct: 483 FKPTPLPLRALPWTFRKAWMERYKSVAAKQLDEIEAVMPLMEVLNLILDPHKVVRNLILE 542

Query: 471 --KKAIDHNETKALTRENSAIIKKPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLL 528
             K   D ++    T   +A  +    KL DPGSF +PC IG    +  LCDLGASV+L+
Sbjct: 543 RIKMYHDSDDESDATPSRAADKRIVQEKLEDPGSFTLPCSIGEFAFSDCLCDLGASVNLM 602

Query: 529 PLPLF*RLGLGELKLTETTLKLADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNE 588
           PL +  RL   + K  + TL LADRS  +  G ++D+PV I G+++PTDF+VLD++ +++
Sbjct: 603 PLSMARRLEFIQYKPCDLTLILADRSSRKHFGMLKDLPVMINGVEVPTDFVVLDMEVEHK 662

Query: 589 CPIILGRPFLATAGAIVDVQNGRI 612
            P+ILGRPFLA+ GA++DV+ G+I
Sbjct: 663 DPLILGRPFLASVGAVIDVKEGKI 686


>UniRef100_Q7Y1N4 Putative retrotransposon gag protein [Oryza sativa]
          Length = 697

 Score =  232 bits (592), Expect = 2e-59
 Identities = 186/615 (30%), Positives = 289/615 (46%), Gaps = 101/615 (16%)

Query: 40  VRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRFNQKD 99
           VRL LFPFSL  R + WF++    +  +WD    AFL++FFP  KT  LR +I+ F Q  
Sbjct: 77  VRLRLFPFSLLRRVKQWFYA-NCAAANTWDKCSMAFLSKFFPMGKTNALRGRISSFQQTM 135

Query: 100 GEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKNHTEA 159
            E + EAWER +E +  CPHHG++ WLI+  FYNGL+  ++  +DAAA GA  +K    A
Sbjct: 136 DESIPEAWERLQEYVAACPHHGMDDWLILQNFYNGLTPMSRDHLDAAAGGAFFSKTVQGA 195

Query: 160 YSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQKF---EKLNV 216
              IE M  N   W+ ER  T      ++ G++ V E   L AK++ L ++    EK+  
Sbjct: 196 VEFIEKMVSN-MGWSEERLQT------RQRGMHTVKETELLPAKLDLLMKRLDDHEKMPQ 248

Query: 217 NAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRPNQKFYKNPQGSYG 276
             V    +   CE+CG +GH G +C        E+  Y   N G R             G
Sbjct: 249 GTVKALDSHVTCEVCGDTGHPGNNC----PETREEAMYMGNNNGYR-----------RQG 293

Query: 277 QVAPPGYTNNQRVAKKSSLEILLENCIANQNKNLQELKNQTGFLNGSLSKLTTKVDSIAT 336
            +          ++KK +     +  + N+N  L       GF +   ++L         
Sbjct: 294 DLVFAQAKTTDSLSKKLAAN---DKIVENRNVKLD------GFASAFQNQL--------C 336

Query: 337 HTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAHVNAIFLGGSKLEETVAKAKSVKG 396
             KM++TQ++Q+A  V  +    G  PGQP+++ + +V AI   G K           + 
Sbjct: 337 FNKMMETQLAQLASLVPANE--TGRIPGQPDSSIE-NVKAITTRGGKSTRDPPYPNPTRT 393

Query: 397 ESV-KCLGKKGVIESEKLLDK-------DKALTPL--RLTKLNLVTQFTKFLNILQKICI 446
             + K     G+ + E   +K       D  L P   R+ K ++  QF +F+ ++QKI I
Sbjct: 394 NGLSKEAPSNGLADKEVQPEKTMPQEYCDIRLLPFPQRMRKPSVDEQFARFVEVIQKIHI 453

Query: 447 KIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRENSAIIKKPPTKLRDPGSFAIP 506
            +P  +A+ ++P YA+ LK+I + K+ +   E   LT      +++P T          P
Sbjct: 454 NMPLLDAM-QVPTYARCLKDILNNKRPLPTTEVVKLT----GTMQQPDT----------P 498

Query: 507 CMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETTLKLADRSDIQPVGNVEDIP 566
              G E  + A           P P+        L+L +++++   R         +D+P
Sbjct: 499 QAPGEEERSGA-----------PTPM-------RLQLVDSSIRYTARI-------AKDVP 533

Query: 567 VKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQNGRIIFQVSDELIGFELE 626
           VKI    IP DF+VLD+D   E P ILGRPFL+TAGA +DV  G I F ++ +   FE +
Sbjct: 534 VKIRYFFIPVDFVVLDMDTGKETPFILGRPFLSTAGANIDVGTGSIYFHINGKEEKFEFQ 593

Query: 627 NYMKGPALYSCNVIK 641
                P    C++++
Sbjct: 594 -----PRTEQCSMVR 603


>UniRef100_Q7XLB2 OSJNBa0011K22.17 protein [Oryza sativa]
          Length = 551

 Score =  226 bits (575), Expect = 2e-57
 Identities = 171/550 (31%), Positives = 259/550 (47%), Gaps = 96/550 (17%)

Query: 84  KTAKLRDQITRFNQKDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSV 143
           KT  LR +I+ F Q   E + EAWER +E +  CPHHG++ WLI+  FYNGL+  +   +
Sbjct: 3   KTNALRGRISSFQQTRDESIPEAWERLQEYMAACPHHGMDDWLILQNFYNGLTPMSHDHL 62

Query: 144 DAAACGALMNKNHTEAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAK 203
           DAAA GA  +K    A  LIE M     +  ++         KK  G  +V + +H+   
Sbjct: 63  DAAARGAFFSKTVQGAVDLIEKMLDLLMKRLDDH-------DKKPQGTVKVLD-SHVT-- 112

Query: 204 VEALTQKFEKLNVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRP 263
                                   CE+CG +GH G DC      +  +  Y   N G  P
Sbjct: 113 ------------------------CEVCGNTGHSGNDC-----LDTREAMYMGNNNGYCP 143

Query: 264 NQKFYKNPQGSYGQVAPPGYTNNQRVAKKSSLEIL---LENCIANQNKNLQELKNQTGFL 320
                   Q   G   P  Y + +  A +  L  +   L++ +  Q K +  L  +    
Sbjct: 144 --------QRGQGWNQPCPYVDRKHEAWEICLTPVQPSLKDLVFAQAKTIDALSKKLATN 195

Query: 321 NGSLSKLTTKVDSIAT-------HTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAH 373
           +  L  +  K+D  A+         KML+TQ++Q A  V  +                  
Sbjct: 196 DKILENINVKLDGFASAFQNQLRFNKMLETQLAQFASLVPANET---------------- 239

Query: 374 VNAIFLGGSKLEETVAKAKSVKGESVKCLGKKGVIESEKLLDKDKALTPL-----RLTKL 428
                 G + + + V  + S   E          ++ EK++ ++   T L     R  K 
Sbjct: 240 ------GTNGIAKEVPSSDSADKE----------VQLEKIVPQEYCDTWLLSFHQRSRKP 283

Query: 429 NLVTQFTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRE-NS 487
           ++  QF +F  ++QKI I +P  +A+ ++P YA++LK++ + K+ +   E   LT + +S
Sbjct: 284 SVDEQFARFAEVIQKIHINVPLLDAM-QVPTYARYLKDMLNNKRLLPTMEVVKLTEQCSS 342

Query: 488 AIIKKPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETT 547
            I+ K P K +DPG   I C IG++  +QA CDLGAS+S++P  +  +L    L  T   
Sbjct: 343 VILHKLPEKKKDPGCPTITCSIGAQQFDQAFCDLGASISVMPKDVPDKLNFTVLTPTLMC 402

Query: 548 LKLADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDV 607
           L+LAD S   P G  ED+PVKI    IP DF+VLD+D   E P+ILGRPFL+TAGA +DV
Sbjct: 403 LQLADLSVHYPTGIAEDVPVKIRDFFIPVDFVVLDMDMGKETPLILGRPFLSTAGANIDV 462

Query: 608 QNGRIIFQVS 617
             G I F ++
Sbjct: 463 GMGSIRFDIN 472


>UniRef100_Q6F2G0 Hypothetical protein OSJNBa0083K01.26 [Oryza sativa]
          Length = 585

 Score =  222 bits (565), Expect = 3e-56
 Identities = 174/572 (30%), Positives = 263/572 (45%), Gaps = 92/572 (16%)

Query: 84  KTAKLRDQITRFNQKDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSV 143
           KT  L  +I+ F Q   E + EAWE  +E +  CPHHG++ WLI+  FYN L+  ++  +
Sbjct: 3   KTDALCGRISSFQQTRDESIPEAWELLQEYVAACPHHGMDDWLILQNFYNRLTPMSRDHL 62

Query: 144 DAAACGALMNKNHTEAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAK 203
           DAAA GA  +K       LIE M  N   W+ ER  T      ++ G++ V E   LAAK
Sbjct: 63  DAAAGGAFFSKTVQGTVELIEKMVSN-MGWSKERLQT------RQRGMHTVKETELLAAK 115

Query: 204 VEALTQKF---EKLNVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQG 260
           ++ L ++    EK     V    +   CE+CG + H G DC        E +     N G
Sbjct: 116 LDLLMKRLDNHEKRPQGTVKALDSHVTCEVCGGTDHSGNDCP---ETREEAMYMGNNNNG 172

Query: 261 TRPNQKFYKNPQGSYGQVAPPGYTNNQRVAKKSSLEILLENCIANQNKNLQELKNQTGFL 320
            RP        QG  G   P  Y                     N N+            
Sbjct: 173 YRP--------QGVQGWNQPRSYYQG-----------------GNNNE------------ 195

Query: 321 NGSLSKLTTKVDSIATHTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAHVNAIFLG 380
                                 TQ++Q+A  V  +    G  PGQP ++ + +V AI   
Sbjct: 196 ----------------------TQLAQLAYLVPANET--GRIPGQPYSSIE-NVKAITTR 230

Query: 381 GSKLEE-----TVAKAKSVKGESVKCLGKKGVIESEKLLDKDKALT-----PLRLTKLNL 430
           G K          A    +  E+         I+ EK + ++   T     P    K ++
Sbjct: 231 GGKSTRDPPYPNPAGTNGMSKETPSNDSADKEIQPEKTVPQEYCDTRLLPFPQWSRKTSV 290

Query: 431 VTQFTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRE-NSAI 489
              F +F+ ++Q+I I +   +A+ ++P+YA++LK+I + K+ +   E   LT   ++ I
Sbjct: 291 DELFARFVEVIQRIHINVLLLDAM-QVPIYARYLKDILNNKRPLPTTEVVKLTEHCSNVI 349

Query: 490 IKKPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETTLK 549
           + K P K +      I C IG++  +QALCDLGASVS++P  +F RL    L  T   L+
Sbjct: 350 LHKLPEKKKYSECPTITCSIGAQQFDQALCDLGASVSVMPKDVFDRLNFTVLAPTPMRLQ 409

Query: 550 LADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQN 609
           +AD S     G  ED+P+KI    IP DF+VLD+D   E P+ILGRPFL+TAGA +DV+ 
Sbjct: 410 MADSSVRYQAGIAEDVPIKIWDFFIPVDFVVLDMDTRKETPLILGRPFLSTAGANIDVET 469

Query: 610 GRIIFQVSDELIGFELENYMKGPALYSCNVIK 641
             I F ++++   FE +     P    C++++
Sbjct: 470 SSICFHINEKEEKFEFQ-----PRTEQCSMVR 496


>UniRef100_Q7F9Z3 OSJNBa0079C19.24 protein [Oryza sativa]
          Length = 461

 Score =  188 bits (478), Expect = 4e-46
 Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 45/492 (9%)

Query: 74  AFLARFFPPSKTAKLRDQITRFNQKDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYN 133
           AFL++FFP  KT  LR +I+ F Q   E + EAWER        PHHG++  LI+  FYN
Sbjct: 2   AFLSKFFPMGKTNALRGRISNFQQTRDESIPEAWER--------PHHGMDNSLILQNFYN 53

Query: 134 GLSYTTKMSVDAAACGALMNKNHTEAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYE 193
           GL+  +   +DAAA GA  +K    A  LIE M  N   W+ ER  T      ++ GI+ 
Sbjct: 54  GLTTMSHDHLDAAAGGAFFSKTVRGAIDLIEKMVSN-MGWSKERLQT------RQQGIHT 106

Query: 194 VSEYNHLAAKVEALTQKFEKLN---VNAVTPSSASPPCEICGISGHIGVDCQLGSAANIE 250
           V E   LAAK++ L ++ +  +    + V        CE+CG +GH G DC        E
Sbjct: 107 VKETELLAAKLDLLMKRLDDHDNRPQDTVKALDLHVTCEVCGGTGHSGNDCP----ETHE 162

Query: 251 QLNYAQFNQGTRPNQKFYKNPQGSYGQVAPPGYTNNQRVAKKSSLEILLENCIANQNKNL 310
           +  Y   N     N ++   PQG  G   P  Y   +      S +  L++ I  Q K  
Sbjct: 163 EAMYMGKN-----NNEY--RPQGGQGWNQPRPYYQGENNNSNFSNQPSLKDLIFVQAKTT 215

Query: 311 QELKNQTGFLNGSLSKLTTKVDSIATH-------TKMLKTQISQVAQQVATSSQTPGVFP 363
             L  +    +  L  +  ++D   +         KM++TQ++Q+A  V  +        
Sbjct: 216 DALSKKLAANDKILENINVQLDGFTSSFQNQLIFNKMIETQLAQLASLVPANEIGRIPRR 275

Query: 364 GQPETNPKAHVNAIFLGGSKLEETVAKAKSVKGESVKCLGKKGVIESEKLLDKDKALTPL 423
           G   T  + + N     G   E   + + + + +  K +        ++  D      P 
Sbjct: 276 GGKSTRDRPYPNPAGTNGVAREAPSSDSANKEVQPEKAV-------PQEYYDTRLLSFPQ 328

Query: 424 RLTKLNLVTQFTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALT 483
           R  K ++  QF +F+ ++QKI I +   +A+ ++P YA++LK+I + K+ +   E   LT
Sbjct: 329 RSRKPSVDEQFARFVEVIQKIHINVSLFDAM-QVPTYARYLKDILNNKRPLPTTEVIELT 387

Query: 484 RE-NSAIIKKPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELK 542
            + ++ I+ K   K + PG   I C IG++  NQAL DLG SVS++P+ +F +L    L 
Sbjct: 388 EQCSNVILHKLSEKRKHPGCPTITCSIGAQQFNQALRDLGVSVSVIPMDVFDKLNFTVLA 447

Query: 543 LTETTLKLADRS 554
            T   L+LAD S
Sbjct: 448 PTPMRLQLADSS 459


>UniRef100_Q7XLB4 OSJNBa0011K22.15 protein [Oryza sativa]
          Length = 406

 Score =  156 bits (395), Expect = 2e-36
 Identities = 117/356 (32%), Positives = 170/356 (46%), Gaps = 32/356 (8%)

Query: 38  EAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRFNQ 97
           +AVRL LF FSL  RA+ WF++    +I +WD    AFL++FFP  KT  LR +I+ F Q
Sbjct: 35  DAVRLRLFLFSLLGRAKQWFYANRA-AINTWDKCSTAFLSKFFPMGKTNALRGRISSFQQ 93

Query: 98  KDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKNHT 157
              E + EAWER +E +  CP HG++ WLI+  FYNGL+  ++  +D AA GA  +K   
Sbjct: 94  TRDESIPEAWERLQEYVAACPLHGMDDWLILLNFYNGLTLMSRDHLDTAAGGAFFSKTVQ 153

Query: 158 EAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQKF---EKL 214
            A  LIE M  N   W+ ER  T       + G++ V E   LAAK++ L ++    EK 
Sbjct: 154 GAVDLIEKMVSN-MGWSEERLQT------HQQGMHIVKETELLAAKLDLLIKRLDDHEKQ 206

Query: 215 NVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRPNQKFYKNPQGS 274
               V        CE+C  + H G DC        E +     N G RP      N    
Sbjct: 207 PQGTVKALDYHITCEVCSNTSHSGNDC---PETREEAMYMGNNNNGYRPQGGQRWNQPRP 263

Query: 275 YGQVAPPGYTNNQRVAKKSSLEILLENCIANQNKNLQELKNQTGFLNGSLSKLTTKVDSI 334
           Y Q    G  NN   + +SSL+ L    +  Q K    L  +    +  L  +  K+D  
Sbjct: 264 YYQ----GGNNNGNFSNQSSLKDL----VFAQAKTTDALSKKLAANDNILENINVKLDGF 315

Query: 335 A-------THTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAHVNAIFLGGSK 383
           A       +  KM++T ++Q+A  V  +     +  GQP+++ + +V  I   G K
Sbjct: 316 ASTFQNQLSFNKMIETHLAQLASLVPANESRRVL--GQPDSSVE-NVRVIITRGGK 368


>UniRef100_Q9LH13 Similarity to Athila retroelement ORF1 protein [Arabidopsis
           thaliana]
          Length = 583

 Score =  155 bits (392), Expect = 4e-36
 Identities = 125/513 (24%), Positives = 245/513 (47%), Gaps = 37/513 (7%)

Query: 141 MSVDAAACGALMNKNHTEAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYEVSEYNHL 200
           M++D A+ G  M K  TEA  LIE++A ++    +   V     ++   G  E  ++  L
Sbjct: 1   MALDTASNGEFMTKTETEATKLIENLAGSN----SNHNVDYDRSNRGGGG--ESKQFAEL 54

Query: 201 AAKVEALTQKFEKLNVNAVTPSSASPPCEICGISGHIGVDCQLG---SAANIEQLNYAQF 257
           +AKVE L ++ +K +VN    SS     +     G   +  ++     + N+E      +
Sbjct: 55  SAKVEQLMRRDQK-SVNFCEDSSKGMVHQEFSGDGSEDLQAEINFVNGSTNVENPQDQVY 113

Query: 258 -NQGTRPNQKF----YKNPQGSYGQVAPPGYTNNQRVAKKSSLEILLENCIANQNKNLQE 312
             Q     QKF    ++N     GQ  PP  T +      + ++++++  + +Q KN  +
Sbjct: 114 PTQAGSQGQKFQPYGFQNKGNYQGQFQPPAGTGHASSFGDNEMKLMMQQVLEDQKKNAAD 173

Query: 313 LKNQTGFLNGSLSKLTTKVDSIATHTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKA 372
           +  +   ++   + L  K  ++++H K L+ Q+SQ+   V+ S +  G   G+ +   K 
Sbjct: 174 INVK---VDSMYNDLNGKFATLSSHVKTLENQVSQI---VSASMRPDGTHSGKVKPKGKE 227

Query: 373 HVNAIFLGGSKLEETVAKAKSVKGESVKCLGKKGVIESEKLLDKD------KALTPLRLT 426
              AI +     E  VAK        V+ L +  ++E ++ L  +      K   P R  
Sbjct: 228 QCYAIMIQEELREIVVAKQVETNVVVVETLVEDKIVEDDEPLSVEPPPYVPKLPFPGRER 287

Query: 427 KLNLVTQFTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTR-- 484
           ++    ++ +F  I++++ +++PF + +  +P Y  +LK I S K++I+    K +++  
Sbjct: 288 QIQRQKEYARFDEIMKQLYVRLPFLQLVLHVPSYRSYLKYILSNKRSIEEG-VKLISKGE 346

Query: 485 ENSAIIKKPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLT 544
           E++ +++    +     +  +  + G E +N          ++ P  +  +LG+   K +
Sbjct: 347 EHAQLVESQRQQKEAQLTNVVEMLAGKEMVNTCS-------AIPPATIPKKLGITNFKPS 399

Query: 545 ETTLKLADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAI 604
             +L LADRS   P+G  E++  ++    IPT+F+VL++D++   P+ LGRPFL T  AI
Sbjct: 400 RISLILADRSVQFPMGLAENVHARVGNFYIPTNFVVLELDKEPHDPLNLGRPFLNTVEAI 459

Query: 605 VDVQNGRIIFQVSDELIGFELENYMKGPALYSC 637
           +DV+   I  Q+ D  + F+++   K P +  C
Sbjct: 460 IDVRRSTINLQIGDYALEFDIKGTRKNPTIEDC 492


>UniRef100_Q9C8Q7 Athila ORF 1, putative; 43045-40843 [Arabidopsis thaliana]
          Length = 530

 Score =  152 bits (385), Expect = 2e-35
 Identities = 79/190 (41%), Positives = 128/190 (66%), Gaps = 4/190 (2%)

Query: 448 IPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRENSAIIKKP--PTKLRDPGSFAI 505
           +P  + L+ +P   K++K++ +++   +      L+ E SAII++     KL DPGSF +
Sbjct: 121 MPLVDCLALIPNEHKYVKDLITERIK-EVQGMVVLSHECSAIIQQKIVQEKLEDPGSFTL 179

Query: 506 PCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETTLKLADRSDIQPVGNVEDI 565
           PC I   T + +LCDLGASVS++PL +  +LG  + K  + TL LADR+  +P G +ED+
Sbjct: 180 PCSIRQLTFSNSLCDLGASVSIMPLSMARKLGFVQYKPCDLTLILADRTSRRPFGLLEDV 239

Query: 566 PVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQNGRIIFQVSDEL-IGFE 624
           PV I G+++P DF+VL++DE+++ P+ILGRPFLA+AGA++DV+ G+I   + ++  + FE
Sbjct: 240 PVMINGVEVPIDFVVLEMDEESKDPLILGRPFLASAGAVIDVKQGKINLNLGEDFKMKFE 299

Query: 625 LENYMKGPAL 634
           + N MK P +
Sbjct: 300 IRNTMKKPTI 309


>UniRef100_Q8LM79 Hypothetical protein OSJNAa0082N11.11 [Oryza sativa]
          Length = 322

 Score =  151 bits (381), Expect = 7e-35
 Identities = 105/306 (34%), Positives = 164/306 (53%), Gaps = 21/306 (6%)

Query: 321 NGSLSKLTTKVDSIATHTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAHVNAIFLG 380
           N  L    +   +  +  KM++TQ++Q+A  V  +       PGQP+++ + ++ AI   
Sbjct: 27  NVKLDGFASAFQNQLSFNKMIETQLAQLASLVPANESER--IPGQPDSSIE-NIKAITTR 83

Query: 381 GSKLEETVAKAKSVKGESVKCLGKKGVIESEKLLDKDKALTPLRLTKLNLVTQFTKFLNI 440
           G           S +  S     K+  I+ EK + ++   T      +    QF + + +
Sbjct: 84  GG------TNGMSKETPSTDLADKE--IQPEKTVPQEYCDT----RGVGNRQQFARSVEV 131

Query: 441 LQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRENSAIIKKPPTKLRDP 500
           +QKI I +P  +A+ ++P YA++LK+I + K+ +   E       ++ I+ K P K +DP
Sbjct: 132 IQKIHINVPLLDAM-QVPTYARYLKDILNNKRPLPTTE-----HCSNVILHKLPEKKKDP 185

Query: 501 GSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETTLKLADRSDIQPVG 560
               I C IG++  +QALCDLGASVS++P  +F +L    L  T   L+LAD S   PVG
Sbjct: 186 RCPTITCSIGAQQFDQALCDLGASVSVMPKDVFDKLNFTVLAPTPMRLQLADSSVHCPVG 245

Query: 561 NVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQNGRIIFQVSDEL 620
             ED+PVKI    IP DF+VLD+D   E  +ILG PFL+TAGA +DV  G I F ++ + 
Sbjct: 246 IEEDVPVKIWDFFIPVDFVVLDMDTGKETSLILGHPFLSTAGANIDVGMGSIRFHINGKE 305

Query: 621 IGFELE 626
             FE +
Sbjct: 306 EKFEFQ 311


>UniRef100_Q8S6J2 Hypothetical protein OSJNBa0019N10.34 [Oryza sativa]
          Length = 237

 Score =  151 bits (381), Expect = 7e-35
 Identities = 88/199 (44%), Positives = 120/199 (60%), Gaps = 2/199 (1%)

Query: 422 PLRLTKLNLVTQFTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKA 481
           P R  K ++  QF  F+ ++QKI I +P  +A+ ++P YA +LK+I + K+ +   E   
Sbjct: 36  PQRSRKPSVDEQFAHFVEVIQKIHIDVPLLDAM-QVPTYACYLKDILNNKRPLPTTEVVK 94

Query: 482 LTRE-NSAIIKKPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGE 540
           LT + ++ I+ K P K +DPG   I C IG++  +QALCDLGASVS++P  +F +L    
Sbjct: 95  LTLQCSNVILHKLPEKKKDPGCPTITCSIGAQQFDQALCDLGASVSVMPKYVFDKLNFTV 154

Query: 541 LKLTETTLKLADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLAT 600
           L  T   L+LAD S   P G  ED+PVKI    I  DF+VLD+D   E  IILGRPFL T
Sbjct: 155 LAPTPMRLQLADSSVRYPAGIAEDVPVKIRDFFILVDFVVLDMDTGKEMSIILGRPFLGT 214

Query: 601 AGAIVDVQNGRIIFQVSDE 619
           AGA + V  G I FQ   E
Sbjct: 215 AGANIHVGTGSIRFQYQRE 233


>UniRef100_Q6UUB7 Hypothetical protein [Oryza sativa]
          Length = 450

 Score =  150 bits (380), Expect = 9e-35
 Identities = 133/431 (30%), Positives = 209/431 (47%), Gaps = 64/431 (14%)

Query: 131 FYNGLSYTTKMSVDAAACGALMNKNHTEAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAG 190
           FYNGL+  ++  +DAAA GA  +K    A  L+E M  N   W+ E+  T       + G
Sbjct: 74  FYNGLTPMSRDHLDAAAGGAFFSKMVQGAVDLVEKMVSN-MGWSEEQLQTC------QRG 126

Query: 191 IYEVSEYNHLAAKVEALTQKF---EKLNVNAVTPSSASPPCEICGISGHIGVDCQLGSAA 247
           ++ V E   LAAK++ L ++    EK     V    +   CE+C  +GH G DC      
Sbjct: 127 MHTVKETELLAAKLDLLMKRLDNHEKRPQGTVKALDSHVTCEVCSSTGHSGNDCP----- 181

Query: 248 NIEQLNYAQFNQGTRPNQKFYKNPQGSYG--QVAP--PGYTNNQRVAKKSSLEILLENCI 303
             E    A +      N  +Y+ PQG  G  Q+ P   G  NN   + + SL+ L    +
Sbjct: 182 --ETREEAMY----MGNNNWYR-PQGGQGWSQLRPYYQGGNNNGNFSNQPSLKDL----V 230

Query: 304 ANQNKNLQELKNQTGFLNGSLSKLTTKVDSIATHTKMLKTQ-ISQVAQQVATSSQTPGVF 362
            +Q K    L  +                 +AT+ K+L+   ++Q+A  V  +    G  
Sbjct: 231 FSQAKTTDALSKK-----------------LATNDKILENNNLAQLASLVPVNET--GRI 271

Query: 363 PGQPETNPKAHVNAIFLGGSKLEETVAKAKSVKGESVKCLGKKGVIESEKLLDKDKALTP 422
           PGQP+++ + +V AI + G+   ++  K    +         K V   ++  D    L P
Sbjct: 272 PGQPDSSIE-NVKAITMRGASSSDSADKEDQPE---------KTV--PQEYCDTWLLLFP 319

Query: 423 LRLTKLNLVTQFTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKAL 482
            R+ K  +  QF +F+ ++QKI I +P  +A+ +MP YA++LK I + K+ +   E   L
Sbjct: 320 QRMRKPLVDEQFARFVEVIQKIHINVPLLDAM-QMPTYARYLKGILNNKRPLPTTEVVKL 378

Query: 483 TRE-NSAIIKKPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGEL 541
           T + ++ I+ K P K +DPG   I C IG++  +QALCDLGASVS++P  +F +L    L
Sbjct: 379 TEQWSNVILHKLPEKKKDPGCPTITCSIGAQQFDQALCDLGASVSVMPKNVFDKLNFTML 438

Query: 542 KLTETTLKLAD 552
             T   L+LAD
Sbjct: 439 APTPMHLQLAD 449


>UniRef100_O22104 Vicia faba mRNA expressed from retrotransposon-like gene [Vicia
           faba]
          Length = 238

 Score =  148 bits (374), Expect = 4e-34
 Identities = 82/199 (41%), Positives = 121/199 (60%), Gaps = 3/199 (1%)

Query: 434 FTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRENSAIIK-- 491
           F  FL + +K+ + I   EAL +MP YAKF+K+I SKK+ ID  +    T   S+I++  
Sbjct: 14  FEIFLEMFKKLELNILVLEALEKMPTYAKFMKDIISKKRTID-TDPIIHTETCSSILQGM 72

Query: 492 KPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGELKLTETTLKLA 551
           K P K +D G    PC IG  +  +   +LGASVSLLP  ++ +LG+  ++ T  TL+ A
Sbjct: 73  KIPVKKKDRGFVTTPCTIGDRSFKKYFINLGASVSLLPFYIYKKLGISNVQNTRMTLRFA 132

Query: 552 DRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQNGR 611
           D S   P G VED+ VKI+    P DF+VL++ ED E  +ILGRPFL T   ++D++ G 
Sbjct: 133 DHSVKIPYGIVEDVLVKIDKFVFPVDFVVLEMPEDEEITLILGRPFLETRRCLIDIEEGT 192

Query: 612 IIFQVSDELIGFELENYMK 630
           +  +V DE +  +++N MK
Sbjct: 193 VTLKVYDEELKIDVQNTMK 211


>UniRef100_Q8S618 Hypothetical protein OSJNBb0048O22.17 [Oryza sativa]
          Length = 412

 Score =  148 bits (373), Expect = 6e-34
 Identities = 100/279 (35%), Positives = 141/279 (49%), Gaps = 27/279 (9%)

Query: 38  EAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRFNQ 97
           +A++L LFPFSL  +A+ WF++     I +WD    AF ++FFP  KT  LR +I+ F Q
Sbjct: 75  DAIKLRLFPFSLIGKAKRWFYANRA-MINTWDKCSTAFPSKFFPMGKTNALRGRISSFQQ 133

Query: 98  KDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKNHT 157
              E + EAWER +E + +CPHHG++ WLI+  FYNGL+  ++  +DAAA GA  +K   
Sbjct: 134 TRDESIPEAWERLQEYVAVCPHHGMDDWLILQNFYNGLTLMSRDHLDAAAGGAFFSKTVR 193

Query: 158 EAYSLIEDMAQNHYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQKF---EKL 214
            A  LIE M  N   W+ ER  T       + G++ V E   LAAK++ L ++    +K 
Sbjct: 194 GAIDLIEKMVSN-MGWSEERLQT------HQQGMHTVKETEMLAAKLDLLMKRLDDHDKR 246

Query: 215 NVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRPN---QKFYKN- 270
               V    +   CE+CG +GH G D         E +     N G RP    QK + N 
Sbjct: 247 PQGTVKALDSHVTCEVCGSTGHSGNDF---LETREEAMYMGSNNNGYRPQGVIQKIHINV 303

Query: 271 PQGSYGQVAPPGYT-------NNQRVAKKSSLEILLENC 302
           P     QV  P Y        NN+R      ++ L E C
Sbjct: 304 PLLDAMQV--PTYARYLKDILNNKRPLPTMEVDKLTEQC 340



 Score = 36.6 bits (83), Expect = 2.4
 Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 1/48 (2%)

Query: 440 ILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKALTRENS 487
           ++QKI I +P  +A+ ++P YA++LK+I + K+ +   E   LT + S
Sbjct: 295 VIQKIHINVPLLDAM-QVPTYARYLKDILNNKRPLPTMEVDKLTEQCS 341


>UniRef100_Q7XF80 Hypothetical protein [Oryza sativa]
          Length = 725

 Score =  146 bits (369), Expect = 2e-33
 Identities = 88/211 (41%), Positives = 128/211 (59%), Gaps = 4/211 (1%)

Query: 422 PLRLTKLNLVTQFTKFLNILQKICIKIPFAEALSRMPLYAKFLKEIFSKKKAIDHNETKA 481
           P R  K ++  QF  F+ ++QKI I +P  +A+ ++P YA +LK+I + K+ +   E   
Sbjct: 67  PQRSRKPSVDEQFAHFVEVIQKIHIDVPLLDAM-QVPTYACYLKDILNNKRPLPTTEVVK 125

Query: 482 LTRE-NSAIIKKPPTKLRDPGSFAIPCMIGSETLNQALCDLGASVSLLPLPLF*RLGLGE 540
           LT + ++ I+ K P K +DPG   I C IG++  +QALCDLGASVS++P  +F +L    
Sbjct: 126 LTLQCSNVILHKLPEKKKDPGCPTITCSIGAQQFDQALCDLGASVSVMPKYVFDKLNFTV 185

Query: 541 LKLTETTLKLADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLAT 600
           L  T   L+LAD S   P G  ED+PVKI    I  DF+VLD+D   E  IILGRPFL T
Sbjct: 186 LAPTPMRLQLADSSVRYPAGIAEDVPVKIRDFFILVDFVVLDMDTGKEMSIILGRPFLGT 245

Query: 601 AGA-IVDVQNGRIIFQVSDELIGFELENYMK 630
           AGA I ++Q   +    +D L+ F + N+++
Sbjct: 246 AGANIHNIQEVEVEPPKTDSLVKF-MHNFLE 275


>UniRef100_Q9MA70 F2J6.11 protein [Arabidopsis thaliana]
          Length = 823

 Score =  145 bits (367), Expect = 3e-33
 Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 42/360 (11%)

Query: 36  NQEAVRLHLFPFSLRDRARAWFHSLEVGSITSWDDMRRAFLARFFPPSKTAKLRDQITRF 95
           ++++ +L LFPFSL D+A  W  +L V S+ + DD ++AFLA+FF  S+TA+LR++I+ F
Sbjct: 118 SEDSFKLRLFPFSLGDKAHLWEKTLPVDSVDTLDDCKKAFLAKFFSNSRTARLRNEISGF 177

Query: 96  NQKDGEYLYEAWERFKEMLRLCPHHGLEKWLIVHTFYNGLSYTTKMSVDAAACGALMNKN 155
           NQK+ E   EAWERFK     CPHHG +K  ++ T Y G     +M +D  + G  +NK+
Sbjct: 178 NQKNSESFAEAWERFKGYSTQCPHHGFKKASLLSTLYRGALPKIRMLLDTTSNGNFLNKD 237

Query: 156 HTEAYSLIEDMAQN------HYQWTNERAVTAPTPSKKEAGIYEVSEYNHLAAKVEALTQ 209
             E + L+E++AQ+      +Y  TN  +  +    K+   +  +   N      E  T 
Sbjct: 238 VAEGWELVENLAQSDGNYNENYDRTNRGSSDSEDRHKRRTKLLMIRLTNWCLLNREMSTT 297

Query: 210 KFEKLNVNAVTPSSASPPCEICGISGHIGVDCQLGSAANIEQLNYAQFNQGTRPNQKFYK 269
             +K   N+                G I +  +  + AN +   Y   NQ   P  K + 
Sbjct: 298 LQKKSLHNSK--------------KGRILLLRRSNNVANPQDQVYPPQNQ--PPQAKPFI 341

Query: 270 NPQGSYGQ---VAPPGYTN--NQRVAKKSSLEILLE-------NCIANQNKNLQELKNQT 317
                Y Q     PPG+T    Q  A+ S ++ LL        +C    +K L EL   T
Sbjct: 342 PYNQGYNQKQNFGPPGFTQQPQQTSAQDSEMKTLLHQLVQGQASCSMTMDKKLAEL---T 398

Query: 318 GFLNGSLSKLTTKVDSIATHTKMLKTQISQVAQQVATSSQTPGVFPGQPETNPKAHVNAI 377
             ++ S + L  K+D++ T  K ++  I+       ++ + PG  P     NPK + +AI
Sbjct: 399 TRIDCSYNDLNIKIDALNTRVKTMEGHIAS-----TSAPKHPGQLPRNSVQNPKEYAHAI 453



 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 1/87 (1%)

Query: 549 KLADRSDIQPVGNVEDIPVKIEGIDIPTDFMVLDIDEDNECPIILGRPFLATAGAIVDVQ 608
           KLADRS   P G +ED+PVKI  I+IPTDF+VL++DE+ + P+ILGRPFLATAGA++DVQ
Sbjct: 580 KLADRSVRVPHGMLEDLPVKIGSIEIPTDFVVLEMDEEPKDPLILGRPFLATAGALIDVQ 639

Query: 609 NGRIIFQVSDEL-IGFELENYMKGPAL 634
            G+I   +   L + F++   MK P +
Sbjct: 640 MGKIDLNLGKNLHMSFDIAKKMKKPTI 666


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,075,698,075
Number of Sequences: 2790947
Number of extensions: 44418749
Number of successful extensions: 122128
Number of sequences better than 10.0: 692
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 226
Number of HSP's that attempted gapping in prelim test: 121273
Number of HSP's gapped (non-prelim): 920
length of query: 662
length of database: 848,049,833
effective HSP length: 134
effective length of query: 528
effective length of database: 474,062,935
effective search space: 250305229680
effective search space used: 250305229680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)