BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC135396.1 - phase: 0 /pseudo
         (1436 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8W153 Polyprotein [Oryza sativa]                          1098  0.0
UniRef100_Q84M55 Putative polyprotein [Oryza sativa]                  817  0.0
UniRef100_Q851Y3 Putative polyprotein [Oryza sativa]                  815  0.0
UniRef100_Q9FIC5 Retroelement pol polyprotein-like [Arabidopsis ...   805  0.0
UniRef100_Q7X6S0 OSJNBb0011N17.2 protein [Oryza sativa]               772  0.0
UniRef100_Q6ATL7 Putative polyprotein [Oryza sativa]                  732  0.0
UniRef100_Q7XKG6 OSJNBb0065J09.3 protein [Oryza sativa]               721  0.0
UniRef100_Q9SXQ4 Polyprotein [Arabidopsis thaliana]                   700  0.0
UniRef100_Q94KV0 Polyprotein [Arabidopsis thaliana]                   696  0.0
UniRef100_Q9ZT94 Putative polyprotein of LTR transposon [Arabido...   693  0.0
UniRef100_O49145 Polyprotein [Arabidopsis arenosa]                    679  0.0
UniRef100_Q9SXQ2 Polyprotein [Arabidopsis thaliana]                   676  0.0
UniRef100_Q9ZQK0 Putative retroelement pol polyprotein [Arabidop...   676  0.0
UniRef100_Q8RZ67 Putative rice retrotransposon retrofit gag/pol ...   666  0.0
UniRef100_O24438 Retrofit [Oryza longistaminata]                      662  0.0
UniRef100_Q9SXQ5 Polyprotein [Arabidopsis thaliana]                   652  0.0
UniRef100_Q8LNV0 Putative copia-like polyprotein [Oryza sativa]       639  0.0
UniRef100_Q6F356 Putative polyprotein [Oryza sativa]                  612  e-173
UniRef100_Q04358 Potato DNA for copia-like transposable element ...   600  e-169
UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum]          580  e-164

>UniRef100_Q8W153 Polyprotein [Oryza sativa]
          Length = 1472

 Score = 1098 bits (2839), Expect = 0.0
 Identities = 607/1447 (41%), Positives = 873/1447 (59%), Gaps = 66/1447 (4%)

Query: 4    IRLNGA-NYFRWSQSVQLYIRGRGKIGYITGDKKQPDKVGA-DYDTWDAENSMVMTWLVN 61
            I+L G  NY  WS+   L ++ +G  GY+TG+ K+P+   + ++ TW   NS+V+ WL+ 
Sbjct: 49   IKLEGVKNYLSWSRRALLILKTKGLEGYVTGEVKEPENTSSVEWKTWSTTNSLVVAWLLT 108

Query: 62   SLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVTKYFGCL 121
            SL   I       ++A ++W+ ++++YS  GN   + E   ++  +RQ E SV +Y   L
Sbjct: 109  SLIPAIATTVETISSASEMWKTLTKLYSGEGNVMLMVEAQEKISALRQGERSVAEYVAEL 168

Query: 122  KRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILGRNPIPPI 181
            K +W DLD ++    +  +     +K V+  RV +FL GLN EF+  R  +  +  +P +
Sbjct: 169  KSLWSDLDHYDPLGLEHSDCIAKMKKWVERRRVIEFLKGLNPEFEGRRDAMFHQTTLPTL 228

Query: 182  GEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDKTHLVCDYC 241
             E  A + +EE +++V+      +  P       A+ Q           G +T   C  C
Sbjct: 229  DEAIAAMAQEELKKKVLPSAAPCSPSP-----TYAIVQ-----------GKETR-ECFNC 271

Query: 242  GRNRHTQETCFK----LHGRPNN-SKAGKFGDRPMPTTSNAASSPFTKEQMDHLLKLLKF 296
            G   H    C       +GR     + G  G R     SN       +         L+ 
Sbjct: 272  GEMGHLMRDCHAPRKPTYGRGRGVDRGGTRGGRGYAGRSNRGRGYGYRGDYKANAVTLEE 331

Query: 297  NSSPNTP--IGTVAQTGKDSWA---LSVQNHSNPWIIDSGASEHMTNCSHLFSSYFPSSG 351
             SS  TP  +   A +   S+    +S+    + WI+DSGAS H+T  S  F+SY P S 
Sbjct: 332  GSSGTTPDNVANFAHSTSGSFNQAFMSMNTSHSSWILDSGASRHVTGMSGEFTSYKPYSF 391

Query: 352  SEK--VKIADGSYSSIAGKGNIKISEQITLQSVLHVPKFACNLLSVHKLSEDSNCSVLFC 409
            + K  ++ ADG+   + G+G ++ +  ITL SVL+V  F  NL+S+  L ++ +C V   
Sbjct: 392  AHKETIQTADGTSCQVKGEGIVQCTPSITLSSVLYVHSFPVNLISISSLVDNMDCRVSLD 451

Query: 410  RSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSSRTSPPLVSNKIMLWHKRLG 469
            R  C+ Q++ +GK +G     +GL+Y D            + TS  +   +++L H RLG
Sbjct: 452  RENCLIQERRTGKKLGIGIRRDGLWYLDRRGTNEDVCALMASTSKEVT--EVLLLHCRLG 509

Query: 470  HPSFSYLKHLFP-EFSKEISSSQFHCDACHLAKDHRVSFNSRGYSASKPFYLIHSDVWGP 528
            H SF  +  +FP EFSK +      CDAC   K  R S+ SRG  +  PF LIHSDVW  
Sbjct: 510  HISFEIMSKMFPVEFSK-VDKHMLICDACEYGKHTRTSYVSRGLRSILPFMLIHSDVW-T 567

Query: 529  SKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGILRSDN 588
            S + ++S  K+FVTFID ++R+ W+YLM  K EV + FQ+F+  IKN F+  +  +R+DN
Sbjct: 568  SPVVSMSGMKYFVTFIDCYSRMTWLYLMRHKDEVLKCFQNFYAYIKNHFNARVQFIRTDN 627

Query: 589  GTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPKYLWG 648
            G EY N     FL   GI+HQ++C DTP QNG+AERKNRHLLE+ R++M++MNVPK+LW 
Sbjct: 628  GGEYMNSEFGHFLSLEGILHQTSCPDTPPQNGVAERKNRHLLEIARSLMYTMNVPKFLWS 687

Query: 649  NALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPNIFRSK 708
             A++TA +LINR PSR+L  +TP +++   F  +  +  +P +VFGC C+V        K
Sbjct: 688  EAVMTAAYLINRTPSRILGMKTPYEMI---FGKNEFV--VPPRVFGCTCFVRDHRPSIGK 742

Query: 709  LDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQPFFRENSLQGESQSSNEE 768
            LDP+A KC+F+GY+S++KGYKC++P  ++ F SMDV F E  PF+             E+
Sbjct: 743  LDPRAVKCIFIGYSSSQKGYKCWSPSERRTFVSMDVTFRESVPFY------------GEK 790

Query: 769  DNFWEILPVLDDIVTNDHLDAKITEPRNPNLELLEHMVFETGGEEGETLIKNPELRVYVR 828
             +   +   LDD+   DH   K  E     L+  E    +    E    I +P      R
Sbjct: 791  TDISSLFVDLDDLTRGDHDQQK--EGEILGLKENEQSKGKIVVGEIPCAIGDPVQEQEWR 848

Query: 829  KKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSSSGN---SSHSSNDLPDLSFPDINLPI 885
            K   ++  N  V+   ++  +  +   D+  S    +   SS S  +  ++   + NLPI
Sbjct: 849  KPHEEE--NLQVYTRRMRLPTTQQVEVDDQVSDDLTHVQVSSESGGEQIEIREEESNLPI 906

Query: 886  AVRKNIPDLNIPIAERKR----TRTCTKHPMSNYLSYDKLSHSHKAYVSRISNLFVPRTI 941
            A+RK +        +R        +  ++ ++NY+SY  LS +++A+V+ +++  +P+  
Sbjct: 907  AIRKGMRSNAGKPPQRYGFEIGDESGDENDIANYVSYTSLSSTYRAFVASLNSAIIPKDW 966

Query: 942  QEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVFTVKCKADGSVERYKAR 1001
            +EA  DP W  A+ +E+ AL KN TW +   P  KK V CKWV+ VK   DG VERYKAR
Sbjct: 967  KEAKQDPRWHQAMLDELEALEKNKTWDLVSYPNGKKVVNCKWVYAVKQNPDGKVERYKAR 1026

Query: 1002 LVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLNGELHEEVY 1061
            LVAKG++QT+GIDY ETFAPVAK++++R ++S AVNF+W LHQ DVKNAFL+G+L EEVY
Sbjct: 1027 LVAKGYSQTYGIDYDETFAPVAKMSTVRTIISCAVNFDWPLHQLDVKNAFLHGDLQEEVY 1086

Query: 1062 MRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQADHTMFFKHS 1121
            M +PPGF     +GKV RLKKSLYGLKQSPRAWF+RF   +   G+ Q   DHT+F+ HS
Sbjct: 1087 MEIPPGFATLQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMCAMGYKQCNGDHTVFYHHS 1146

Query: 1122 REGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEFARSKEGIF 1181
             +  I IL VYVDD+I+TG+D  EI+ LK+ L  EF++KDLG+LKYFLG+E ARS  GI 
Sbjct: 1147 GD-HITILAVYVDDMIITGNDCSEITRLKQNLSKEFEVKDLGQLKYFLGIEIARSPRGIV 1205

Query: 1182 LNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEIIDRERYQRLAGRLIYLSHTR 1241
            L+QRKY LDLL++TGM GC+ A TP+D N KL + + + + ++ERYQRL GRLIYL HTR
Sbjct: 1206 LSQRKYALDLLSDTGMLGCRPASTPVDQNHKLCAESGNPV-NKERYQRLVGRLIYLCHTR 1264

Query: 1242 PDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQVEAYTDADWAG 1301
            PDI +AVS++S++MH P   H +AV+RILRYLKG+PGKGL F+  GH++VE Y DA WA 
Sbjct: 1265 PDITYAVSMVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLEVEGYCDAHWAS 1324

Query: 1302 NINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEVLWIKKFMQELK 1361
              +DRRSTSGYC FVGGNLV+WRSKKQ VV+RS+AEAE+R+++    E+LW++  + EL 
Sbjct: 1325 CPDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYRAMSVSLSELLWLRNLLSELM 1384

Query: 1362 IAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEICMSYIPTKSQVA 1421
            +   TPMK++CDNK+AISIA+NPV HDRTKHVE+D+ FIKEK+D G + + ++ +  QVA
Sbjct: 1385 LPVDTPMKLWCDNKSAISIANNPVQHDRTKHVELDRFFIKEKLDEGVLELEFVMSGGQVA 1444

Query: 1422 DVLTKSL 1428
            D  TK L
Sbjct: 1445 DCFTKGL 1451


>UniRef100_Q84M55 Putative polyprotein [Oryza sativa]
          Length = 1393

 Score =  817 bits (2110), Expect = 0.0
 Identities = 430/878 (48%), Positives = 585/878 (65%), Gaps = 75/878 (8%)

Query: 605  GIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPKYLWGNALLTACHLINRMPSR 664
            GIIHQ+TC  TP QNG+AERKNRHLLEV R++MF MNVPKYLW  A++TA +LINRMPSR
Sbjct: 516  GIIHQTTCPGTPPQNGVAERKNRHLLEVARSLMFQMNVPKYLWSEAVMTAAYLINRMPSR 575

Query: 665  VLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPNIFRSKLDPKAEKCVFLGYASN 724
            +L  ++P ++L       +    +P KVFGC+C+V        KLDP A KCVF+GYAS+
Sbjct: 576  ILGMKSPAELL-----LGKREFKVPPKVFGCVCFVRDHRPSVGKLDPHAVKCVFVGYASS 630

Query: 725  KKGYKCFNPVTKKFFESMDVHFVEDQPFFRE-----------------NSLQGESQ---- 763
            +KGYKC++P+ ++ F SMDV F E +P+++                  +S +GE +    
Sbjct: 631  QKGYKCWDPIGRRLFVSMDVTFREFEPYYKSKGDLDQFLEEFSTVMEVDSREGERERGDI 690

Query: 764  -SSNEEDNFWEILPVLDDIVTNDHLDAKITE----PRNPNLELLEHMVFETGGEEGETLI 818
               N  D   E + V+  I  +    +K+ E     ++ + E++ H   E  GEEGE ++
Sbjct: 691  HEKNVGDKNGEAV-VIGSIPCSIDDASKVVEVIEDTQDEDREMVPH---EEDGEEGEVVV 746

Query: 819  -------------KNPELRVYVRKKFHKDGTNPI-VFPAEVQSDSPSEGPTDNPSSSSSG 864
                         K  ++ VY R++F   G     +  ++++     + P    S S S 
Sbjct: 747  GTIPCPMEGAERVKQKDVLVYQRRRFDSQGEKRKGLVQSQIEELPHPKCPVPESSQSLSP 806

Query: 865  NSSHSSNDLPDLSFPDINLPIAVRKNIPDLNIPIAERKRTRTCT--------------KH 910
             +S +S +    + P +            + +P+ +R+ TR+                 H
Sbjct: 807  PASLASLETIGNTSPTLE----------HVELPLVQRRETRSNAGRPPIRLGFEHLSFMH 856

Query: 911  PMSNYLSYDKLSHSHKAYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTWCIT 970
             ++NY++Y  +S ++K +++ +  + +P+  + A  DP WK A+KEE+NAL KN TW + 
Sbjct: 857  DIANYITYSHVSPAYKTFIASLQTMPIPKDWKCAKQDPKWKDAMKEELNALVKNKTWELV 916

Query: 971  DLPYDKKAVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRI 1030
             LP +K+AVGCKWVFTVK   +G V+RYKARLVAKG++QT+GIDY ETFAPVAK+ ++R 
Sbjct: 917  KLPPEKRAVGCKWVFTVKQTPEGKVDRYKARLVAKGYSQTYGIDYDETFAPVAKMGTVRA 976

Query: 1031 LLSLAVNFNWTLHQYDVKNAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQS 1090
            L+S AVNF W LHQ DVKNAFL+G+LHEEVYM +PPGF +    GKVC+LKKSLYGLKQS
Sbjct: 977  LVSCAVNFGWPLHQLDVKNAFLHGDLHEEVYMEIPPGFGNSQTVGKVCKLKKSLYGLKQS 1036

Query: 1091 PRAWFERFGSVVKGHGFTQSQADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLK 1150
            PRAWF+RF   V   G++Q   DHT+F+KH R   I IL VYVDDI++TGDD+ EI  LK
Sbjct: 1037 PRAWFDRFRHAVCDMGYSQCNGDHTVFYKH-RGTHITILAVYVDDIVITGDDVEEIRCLK 1095

Query: 1151 RRLEAEFDIKDLGKLKYFLGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPN 1210
             RL   F++KDLG L+YFLG+E ARS +GI L+QRKY+LDLLT+TGM GC+A+ TP+D N
Sbjct: 1096 ERLGKAFEVKDLGPLRYFLGIEIARSSKGIVLSQRKYVLDLLTDTGMLGCRASTTPIDRN 1155

Query: 1211 VKLKSVAEDEIIDRERYQRLAGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRIL 1270
             +L + + D + D+E YQRL GRLIYL HTRPDI++AVSV+S++MH P   H + V +IL
Sbjct: 1156 HQLCAQSGDPV-DKEAYQRLVGRLIYLCHTRPDISYAVSVVSRYMHDPRTGHLDVVHKIL 1214

Query: 1271 RYLKGTPGKGLMFRNRGHIQVEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNV 1330
            RYLKGTPGKGL FR  GH+ VE Y DADWA +++DRRSTSGYC FVGGNLV+WRSKKQ V
Sbjct: 1215 RYLKGTPGKGLWFRKNGHLNVEGYCDADWASSMDDRRSTSGYCVFVGGNLVSWRSKKQAV 1274

Query: 1331 VARSSAEAEFRSVAHGFCEVLWIKKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRT 1390
            VARS+AEAE+R++A    E+LW++  + EL++     + ++CDNK+AISIA+NPV HDRT
Sbjct: 1275 VARSTAEAEYRAMALSLSEMLWMRSLLTELRVLRSDTVMLHCDNKSAISIANNPVQHDRT 1334

Query: 1391 KHVEVDKHFIKEKIDSGEICMSYIPTKSQVADVLTKSL 1428
            KHVE+D+ FIKEKIDSG + + YI +  Q+AD LTK L
Sbjct: 1335 KHVEIDRFFIKEKIDSGVLRLEYIKSCEQLADCLTKGL 1372



 Score =  162 bits (411), Expect = 5e-38
 Identities = 133/479 (27%), Positives = 212/479 (43%), Gaps = 63/479 (13%)

Query: 4   IRLNGA-NYFRWSQSVQLYIRGRGKIGYITGDKKQP-DKVGADYDTWDAENSMVMTWLVN 61
           +RL G+ NY  W +  QL +R +G   ++    ++P DK    + TW+  NS V++WL+ 
Sbjct: 54  LRLEGSKNYLSWCRRAQLMLRAKGVDHFLLESCEEPSDKESQAWRTWNTTNSTVVSWLMT 113

Query: 62  SLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVTKYFGCL 121
           S+   IG        A  +W+ +S MYS  GN   + E   ++  ++Q   +V +Y   L
Sbjct: 114 SVAPSIGRMIEAIQNAAVVWKTLSNMYSGEGNVMMMVEAQNKVENLKQEGRTVQEYASEL 173

Query: 122 KRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILGRNPIPPI 181
           +++W DLD ++  + K  +D     K +   RV  FL GLN EF++ R  +  +  +P +
Sbjct: 174 QQLWADLDHYDPLQLKHEDDIVIGNKWLQRRRVIHFLKGLNKEFEDRRAAMFHQATLPTM 233

Query: 182 GEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVP--------QVNHKSFRNPRG--- 230
            E  + + +EE R ++M G        P+  + +A          QV H S+  P     
Sbjct: 234 EEAISAMVQEEMRLRLMRGTN------PIRSAYIAADNRECYNCGQVGHVSYNCPTSRNI 287

Query: 231 GDKTHLVCDYCGRN---RHTQETCFKLHGRPNNSKAGKFGDR------PMPTTSNAASSP 281
           G +  +   + G     R  +       G     + G+ G R      P           
Sbjct: 288 GGRGSIRGGHGGTRGGFRGDRGVFGGNRGGRGGDRGGRVGGRGRGRGVPQANAVKEDGKA 347

Query: 282 FT--KEQMDHL--LKLLKFNSSPNTP-----IGTVAQTGKDSWA---LSVQNHSNPWIID 329
            T   EQ+      +  K N S NT          AQ G+ + A    S   H   WIID
Sbjct: 348 VTLIGEQVTQWEEWQKNKTNESSNTTTHFGNFANYAQVGEGTQAQALASTYRHPIDWIID 407

Query: 330 SGASEHMTNCSHLFSSYFPSSGSEKVKIADGSYSSIAGKGNIKISEQITLQSVLHVPKFA 389
           SGAS+H+T   + F+SY P   SE ++IADG+   I                  HV    
Sbjct: 408 SGASKHVTGLHNTFTSYTPYIHSETIQIADGTSKPI------------------HV---- 445

Query: 390 CNLLSVHKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFG 448
            NLLS+    +   C V+F  ++C+FQ++ +G+ IGT    +GL+Y +   LG  A+ G
Sbjct: 446 -NLLSISSAIDQLKCIVVFDENSCLFQEKGTGRRIGTGVRRDGLWYINHEELGLAAVVG 503


>UniRef100_Q851Y3 Putative polyprotein [Oryza sativa]
          Length = 1299

 Score =  815 bits (2105), Expect = 0.0
 Identities = 433/909 (47%), Positives = 591/909 (64%), Gaps = 71/909 (7%)

Query: 539  WFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGILRSDNGTEYFNKYLS 598
            W++   +    VC + LM   SE E +F                 +R+DNG EY N   S
Sbjct: 422  WYLDRKETSEDVC-LALMAPTSEEEAKF-----------------IRTDNGGEYINNEFS 463

Query: 599  TFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPKYLWGNALLTACHLI 658
            +FL + GI+HQ++C DTP QNG+AERKNRHLLE  R++M++MNVPK+LW  A++TA +LI
Sbjct: 464  SFLSSEGILHQTSCPDTPPQNGVAERKNRHLLETARSLMYAMNVPKFLWSEAVMTATYLI 523

Query: 659  NRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPNIFRSKLDPKAEKCVF 718
            NR PSR+L  +TP +++   F  +  +  +P KVFGC C+V        KLDP+A KC+F
Sbjct: 524  NRTPSRILGMKTPCEMI---FGKNEFV--VPPKVFGCTCFVRDHRPSIGKLDPRAVKCIF 578

Query: 719  LGYASNKKGYKCFNPVTKKFFESMDVHFVEDQPFFRENSLQGESQSSNEEDNFWEILPVL 778
            +GY+S +KGYKC++P  ++ F SMDV F E  PF+             E+ +   +   L
Sbjct: 579  VGYSSGQKGYKCWSPSERRTFVSMDVTFRESVPFY------------GEKTDLSSLFIDL 626

Query: 779  DDIVTND---HLDAKITEPRNPNLELLEHMVFET-----GG-----EEGETLIKNPELRV 825
            DD  +      +  +I  P+       E +V  +     GG     +E     +   L+V
Sbjct: 627  DDSTSGHDGHQMKDEILGPKGDEQPKKEKLVVGSIPCPMGGPVAQEQEWRKPHEEKNLQV 686

Query: 826  YVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSSSGNSSHSSNDLPDLSFPDINLPI 885
            Y R+        P++   E + +   E  +    S  SG       +  DL       PI
Sbjct: 687  YTRRT-----RCPVIQQVE-EDNQVEEDVSREQGSLESGGEEEEVREESDL-------PI 733

Query: 886  AVRKNI------PDLNIPIAERKRTRTCTKHPMSNYLSYDKLSHSHKAYVSRISNLFVPR 939
            A+RK++      P L      +       ++ +SNY+SYD LS ++KA+++ + ++ +P+
Sbjct: 734  AIRKSVRSNAGKPPLRYGFEAQDEGDD--ENNISNYVSYDSLSSTYKAFIASLDSVQIPK 791

Query: 940  TIQEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVFTVKCKADGSVERYK 999
              +EA  DP W  A+ +E+ AL KN TW +   P  KK V CKWV+TVK   DG VERYK
Sbjct: 792  DWREAKQDPRWHQAMLDELEALEKNKTWDLVPFPKGKKIVNCKWVYTVKQNPDGKVERYK 851

Query: 1000 ARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLNGELHEE 1059
            ARLVAKG++QT+GIDY ETFAPVAK++++R L+S A NF+W LHQ DVKNAFL+ +L EE
Sbjct: 852  ARLVAKGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLHQLDVKNAFLHRDLQEE 911

Query: 1060 VYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQADHTMFFK 1119
            VYM +PPGF     +GKV RLKKSLYGLKQSPRAWF+RF   +    + Q   DHT+F+ 
Sbjct: 912  VYMDVPPGFATSQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMCAMDYKQCNGDHTVFYH 971

Query: 1120 HSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEFARSKEG 1179
            HS +  I IL VYVDD+I+TG+D  EI+ LKR L  EF++KDLG+L+YFLG+E ARS  G
Sbjct: 972  HSGD-HITILAVYVDDMIITGNDCLEITRLKRNLSKEFEVKDLGQLRYFLGIEIARSPRG 1030

Query: 1180 IFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEIIDRERYQRLAGRLIYLSH 1239
            I ++QRKY+LDLL+ETGM GC    TP+D N KL + + D + +RERYQRL GRLIYL H
Sbjct: 1031 IVISQRKYVLDLLSETGMLGCCPVSTPIDQNHKLCAESGDPV-NRERYQRLVGRLIYLCH 1089

Query: 1240 TRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQVEAYTDADW 1299
            TRPDI +AVS++S++MH P  +H EAV+RILRYLKG+PGKGL F+  GH+++E Y DADW
Sbjct: 1090 TRPDITYAVSMVSRYMHDPRSSHMEAVYRILRYLKGSPGKGLWFKKNGHLKIEGYCDADW 1149

Query: 1300 AGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEVLWIKKFMQE 1359
            A  ++DRRSTSGYC +VGGNLV+WRSKKQ+VV+RS+AEAE+R++A    E+LW++  + E
Sbjct: 1150 ASCLDDRRSTSGYCVYVGGNLVSWRSKKQSVVSRSTAEAEYRAMAASLSELLWLRNLLVE 1209

Query: 1360 LKIAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEICMSYIPTKSQ 1419
            LKI G TPMK+ CDNK+AI+IA+NPV HDRTKHVE+D+ FIKEK+D G + + ++ +  Q
Sbjct: 1210 LKILGNTPMKLLCDNKSAINIANNPVQHDRTKHVEIDRFFIKEKLDEGVLELGFVTSGGQ 1269

Query: 1420 VADVLTKSL 1428
            VAD LTK L
Sbjct: 1270 VADCLTKGL 1278



 Score =  150 bits (379), Expect = 3e-34
 Identities = 111/448 (24%), Positives = 196/448 (42%), Gaps = 85/448 (18%)

Query: 4   IRLNGA-NYFRWSQSVQLYIRGRGKIGYITGDKKQPDKVGA-DYDTWDAENSMVMTWLVN 61
           I+L G  NY  WS+   L ++ +G  GY+TG+ K+P+ + + ++ TW   NS+V+ WL+ 
Sbjct: 49  IKLEGVKNYLSWSRRALLILKTKGLEGYVTGEIKEPENISSVEWKTWSTTNSLVVAWLLT 108

Query: 62  SLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVTKYFGCL 121
           SL   I       ++A ++W+ ++ +YS  GN   + E   ++  +RQ E SV +Y   L
Sbjct: 109 SLIPAIATTVETISSASEMWKTLTNLYSGEGNVMLMVEAQEKISVLRQGERSVAEYVAEL 168

Query: 122 KRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILGRNPIPPI 181
           K +W DLD ++    + P+     +K ++  RV +FL GLN EF+  R  +  +  +P +
Sbjct: 169 KHLWSDLDHYDPLGLEHPDCIAKMRKWIERRRVIEFLKGLNSEFEGRRDAMFHQTTLPSL 228

Query: 182 GEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDKTHLVCDYC 241
            E  A + +EE +++V+     A    P     +A  +   + F     G+  HL+ DY 
Sbjct: 229 DEAIAAMAQEELKKKVL---PSATPSSPSPTYVVAQSKETRECF---NCGEMGHLIRDYR 282

Query: 242 GRNRHTQETCFKLHGRPNNSKAGKFGDRPMPTTSNAASSPFTK-----EQMDHLLKLLKF 296
              + +       +GR      G+FGDR         +    +      + DH   ++  
Sbjct: 283 APRKPS-------YGR------GRFGDRGGARGGRGYAGRGNRGRGYEYRSDHRANVVTL 329

Query: 297 ----NSSPNTPIGTV--AQTGKDSWA-LSVQNHSNPWIIDSGASEHMTNCSHLFSSYFPS 349
               + S N  +  +  + +G  + A +S+ +  + WI+DSGAS H+T            
Sbjct: 330 EESCSGSTNVDVANLVHSSSGNSNQAFMSINSSHSNWILDSGASRHVT------------ 377

Query: 350 SGSEKVKIADGSYSSIAGKGNIKISEQITLQSVLHVPKFACNLLSVHKLSEDSNCSVLFC 409
                                                    NL+S+  L +  NC V   
Sbjct: 378 ----------------------------------------VNLVSISSLVDHMNCRVSLD 397

Query: 410 RSTCVFQDQNSGKTIGTAREINGLYYFD 437
           R  C+ Q++ +GK +G     +GL+Y D
Sbjct: 398 RENCLIQERETGKKLGIGVRRDGLWYLD 425


>UniRef100_Q9FIC5 Retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score =  805 bits (2080), Expect = 0.0
 Identities = 502/1483 (33%), Positives = 780/1483 (51%), Gaps = 144/1483 (9%)

Query: 6    LNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPDKVGADYDTWDAENSMVMTWLVNSLTE 65
            L G NY  W+ +++L ++ R K G+  G   QPD+   D+D W A N++V++W+  ++ E
Sbjct: 41   LRGPNYDEWATNLRLALKARKKFGFADGTIPQPDETNPDFDDWIANNALVVSWMKLTIHE 100

Query: 66   EIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVTKYFGCLKRIW 125
             +  +      + D+W ++ + +  + N  +I  L  +L   RQ    +  Y+G L ++W
Sbjct: 101  SLATSMSHLDDSHDMWTHIQKRFG-VKNGQRIQRLKTELATCRQKGTPIETYYGKLSQLW 159

Query: 126  QDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVE-FDEVRGRILGRNPIPPIGEV 184
            + L      +++  +  +  +K  +  ++ +FL GL+   +  V+  +L R P+P + E 
Sbjct: 160  RSLA-----DYQQAKTMEEVRKEREEDKLHQFLMGLDESMYGAVKSALLSRVPLPSLEEA 214

Query: 185  FAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDKTHLVCDYCGRN 244
            +  + ++E  + +               S L   + + K  RN     +        GR 
Sbjct: 215  YNTLTQDEESKSL---------------SRLHDERNDEKMRRNATSSSRNQSAS--MGRG 257

Query: 245  RHT-QETCFK---LHGRPNNSK-AGKFGDRPMPTTSNAASSPFTK--------------E 285
                  T FK     GR  ++      G+     TS+ + S  T+              +
Sbjct: 258  SSVVPATSFKGKQSFGRGASANHVANIGESTTAATSSMSGSQLTEADRVGISGLNDEQWK 317

Query: 286  QMDHLLKLLKFNSSPNTPIGTVAQTGKDSWALSVQNHSNPWIIDSGASEHMTNCSHLFSS 345
            Q+  +LK   FNS+ NT               S +     WIIDSGA+ HMT        
Sbjct: 318  QLRQMLKERNFNST-NTK--------------SSKFFLESWIIDSGATNHMTGTLEFLRD 362

Query: 346  YFPSSGSEKVKIADGSYSSIAGKGNIKISEQITLQSVLHVPKFACNLLSVHKLSEDSNCS 405
                     +K+ DG  ++    G + +   + LQ V  V    C+L+SV +L+   +C 
Sbjct: 363  VCDMPPI-MIKLPDGRLTTSTKHGRVYLGSSLDLQEVFFVDGLHCHLISVSQLTRAKSCV 421

Query: 406  VLFCRSTCVFQDQNSGKTIGTAREINGLYYF--DETPLGNTAMFGSSRTSPPLVSNKIML 463
                   C+ QD+ +   IG  ++ NGLY+F   ET    T M  SS+           L
Sbjct: 422  FQITDKVCIIQDRITLTLIGAGKQQNGLYFFRGTETVASMTRMDSSSQ-----------L 470

Query: 464  WHKRLGHPSFSYLKHLFPEFSKEISSSQFHCDACHLAKDHRVSFNSRGYSASKPFYLIHS 523
            WH RLGHPS   LK L    S   +     C+ C  AK  R  F       S PF ++H 
Sbjct: 471  WHCRLGHPSSKVLKLLSFSDSTGHAFDSKTCEICIKAKQTRDPFPLSNNKTSSPFEMVHC 530

Query: 524  DVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGI 583
            D+WGP +  ++    +F+T +D++TR  W+YL+  K       ++F ++++ QF T I  
Sbjct: 531  DLWGPYRTTSICGSNYFLTLVDNYTRAVWLYLLPSKQTAPMHLKNFISLVERQFSTKIKT 590

Query: 584  LRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVP 643
            +RSDNGTE+    LS+F V +GIIH+++C  TPQQNG  ERK+RH+L V RA+ F   +P
Sbjct: 591  IRSDNGTEFV--CLSSFFVDHGIIHETSCVGTPQQNGRVERKHRHILNVARALRFQARLP 648

Query: 644  KYLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPN 703
               W    LTA +LINR P+ +LQ +TP ++L N  P    I     +VFGC+CYV+   
Sbjct: 649  IEFWSYCALTAAYLINRTPTPLLQGKTPFELLYNRPPPVNHI-----RVFGCICYVHNQK 703

Query: 704  IFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQ-PF---FRENSLQ 759
                K + ++ K +FLGY   KKG++ +N  T     S DV F E + PF     +++  
Sbjct: 704  HGGDKFESRSNKSIFLGYPFAKKGWRVYNFETGVISVSRDVVFRETEFPFPASVFDSTPD 763

Query: 760  GESQSSNEEDNFWEILPVLDDIVTNDHLDAKITEPRNPNLELLEHMVFETGGEEGETLIK 819
             +   SN + +F+  LP          L A         LEL +            T + 
Sbjct: 764  SQLSPSNADQSFF--LP--------SELQAPTPVSITTTLELTQ--------SSSSTNLN 805

Query: 820  NPELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSSSGNSSHSSNDLPDLSFP 879
            +   R+            P    + V   S +E      ++ SS   S +S  LP LS  
Sbjct: 806  DDNFRI------------PSDESSSVNEMSDNEDLNSPTTNESSPFLSPASPSLP-LSPA 852

Query: 880  DINLPI---AVRKNIPDLNIPIAE--------RKRTR-----------------TCTKHP 911
             ++LP+   A   ++P +  P  E        RK+T+                 + T +P
Sbjct: 853  SLSLPLSPAAPSPSLPKIAEPEPEPELLGKGKRKKTQPVRLADYATTLLHQPHPSVTPYP 912

Query: 912  MSNYLSYDKLSHSHKAYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTWCITD 971
            + NY+S  + S +++AYV  IS    P++ +EA+ D NW+ AV +E+ +L    TW + D
Sbjct: 913  LDNYVSSSQFSAAYQAYVFAISLGIEPKSYKEAILDENWRCAVSDEIVSLENLGTWTVED 972

Query: 972  LPYDKKAVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRIL 1031
            LP  KKA+GCKWVF +K K+DG++ER+KARLV  G  QT GIDY ETFAPVAK+ ++R  
Sbjct: 973  LPPGKKALGCKWVFRLKYKSDGTLERHKARLVVLGNKQTEGIDYSETFAPVAKMVTVRAF 1032

Query: 1032 LSLAVNFNWTLHQYDVKNAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSP 1091
            L    + +W +HQ DV NAFL+G+L EEVY++ PPGF     R KVCRL+K+LYGLKQ+P
Sbjct: 1033 LQQVASLDWEVHQMDVHNAFLHGDLDEEVYIKFPPGFGSDDNR-KVCRLRKALYGLKQAP 1091

Query: 1092 RAWFERFGSVVKGHGFTQSQADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKR 1151
            R WF +  + +  +GF Q  +D+++ F   R G    ++VYVDD+I+TG  +  I+  K 
Sbjct: 1092 RCWFAKLTTALNDYGFIQDISDYSL-FTMERNGIRLHILVYVDDLIITGSSLDVITKFKG 1150

Query: 1152 RLEAEFDIKDLGKLKYFLGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNV 1211
             L + F +KDLG L+YFLG+E ARS  GI+L QRKY +D++TETG+ G   A  P++ N 
Sbjct: 1151 YLSSCFYMKDLGILRYFLGIEVARSPAGIYLCQRKYAIDIITETGLLGVWPASHPLEQNH 1210

Query: 1212 KLKSVAEDEIIDRERYQRLAGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILR 1271
            KL     D I D  RY+RL GRLIYL  TRP++++A+ ++SQFM  P   H EA  R++R
Sbjct: 1211 KLALAFGDTISDPSRYRRLVGRLIYLGTTRPELSYAIHMLSQFMSDPKADHMEAALRVVR 1270

Query: 1272 YLKGTPGKGLMFRNRGHIQVEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVV 1331
            YLK +PG+G++ R+   + +  + D+ +      +RS +G+   +GG+ ++W++KK +VV
Sbjct: 1271 YLKSSPGQGILLRSNTPLVLTGWCDSGFDSCPITQRSLTGWFIQLGGSPISWKTKKHDVV 1330

Query: 1332 ARSSAEAEFRSVAHGFCEVLWIKKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTK 1391
            +RSSAEAE+R++A    E+LW++  +  L I+   P+ +Y D+ +AIS+A NPV H RTK
Sbjct: 1331 SRSSAEAEYRAMADTVSELLWLRALLPALGISCNEPIMLYSDSLSAISLAANPVYHARTK 1390

Query: 1392 HVEVDKHFIKEKIDSGEICMSYIPTKSQVADVLTKSLPKRQFD 1434
            HV  D HF++++I  G I   ++ T SQ+AD++TK+L +R+FD
Sbjct: 1391 HVGRDVHFVRDEIIRGTIATKHVSTTSQLADIMTKALGRREFD 1433


>UniRef100_Q7X6S0 OSJNBb0011N17.2 protein [Oryza sativa]
          Length = 1262

 Score =  772 bits (1993), Expect = 0.0
 Identities = 400/818 (48%), Positives = 552/818 (66%), Gaps = 30/818 (3%)

Query: 618  QNGIAERKNRHLLEVTRAIMFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQN 677
            +NG+AERKNRHLLE+ R++M++MNVPK+LW  A++TA +LINR PSR+L  +TP +++  
Sbjct: 447  ENGVAERKNRHLLEIARSLMYTMNVPKFLWSEAVMTAAYLINRTPSRILGMKTPYEMI-- 504

Query: 678  NFPTSRIITNIPLKVFGCLCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKK 737
             F  +  +  +P +VFGC C+V        KLDP+A KC+F+GY+S++KGYKC++P  ++
Sbjct: 505  -FGKNEFV--VPPRVFGCTCFVRDHRPSIGKLDPRAVKCIFIGYSSSQKGYKCWSPSERR 561

Query: 738  FFESMDVHFVEDQPFFRENSLQGESQSSNEEDNFWEILPVLDDIVTNDHLDAKITEPRNP 797
             F SMDV F E  PF+             E+ +   +   LDD+   DH   K  E    
Sbjct: 562  TFVSMDVTFRESVPFY------------GEKTDISSLFVDLDDLTRGDHDQQK--EGEIL 607

Query: 798  NLELLEHMVFETGGEEGETLIKNPELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDN 857
             L+  E    +    E    I +P      RK   ++  N  V+   ++  +  +   D+
Sbjct: 608  GLKENEQSKGKIVVGEIPCAIGDPVQEQEWRKPHEEE--NLQVYTRRMRLPTTQQVEVDD 665

Query: 858  PSSSSSGN---SSHSSNDLPDLSFPDINLPIAVRKNIPDLNIPIAERKR----TRTCTKH 910
              S    +   SS S  +  ++   + NLPIA+RK +        +R        +  ++
Sbjct: 666  QVSDDLTHVQVSSESGGEQIEIREEESNLPIAIRKGMRSNAGKPPQRYGFEIGDESGDEN 725

Query: 911  PMSNYLSYDKLSHSHKAYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTWCIT 970
             ++NY+SY  LS ++KA+V+ +++  +P+  +EA  DP W  A+ +E+ AL KN TW + 
Sbjct: 726  DIANYVSYTSLSSTYKAFVASLNSAIIPKDWKEAKQDPRWHQAMLDELEALEKNKTWDLV 785

Query: 971  DLPYDKKAVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRI 1030
              P  KK V CKWV+ VK   DG VERYKARLVAKG++QT+GIDY ETFAPVAK++++R 
Sbjct: 786  SYPNGKKVVNCKWVYAVKQNPDGKVERYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRT 845

Query: 1031 LLSLAVNFNWTLHQYDVKNAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQS 1090
            ++S AVNF+W LHQ DVKNAFL+G+L EEVYM +PPGF     +GKV RLKKSLYGLKQS
Sbjct: 846  IISCAVNFDWPLHQLDVKNAFLHGDLQEEVYMEIPPGFATLQTKGKVLRLKKSLYGLKQS 905

Query: 1091 PRAWFERFGSVVKGHGFTQSQADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLK 1150
            PRAWF+RF   +   G+ Q   DHT+F+ HS +  I IL VYVDD+I+TG+D  EI+ LK
Sbjct: 906  PRAWFDRFRRAMCAMGYKQCNGDHTVFYHHSGD-HITILAVYVDDMIITGNDCSEITRLK 964

Query: 1151 RRLEAEFDIKDLGKLKYFLGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPN 1210
            + L  EF++KDLG+LKYFLG+E ARS  GI L+QRKY LDLL++TGM GC+ A TP+D N
Sbjct: 965  QNLSKEFEVKDLGQLKYFLGIEIARSPRGIVLSQRKYALDLLSDTGMLGCRPASTPVDQN 1024

Query: 1211 VKLKSVAEDEIIDRERYQRLAGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRIL 1270
             KL + + + + ++ERYQRL GRLIYL HTRPDI +AVS++S++MH P   H +AV+RIL
Sbjct: 1025 HKLCAESGNPV-NKERYQRLVGRLIYLCHTRPDITYAVSMVSRYMHDPRSGHMDAVYRIL 1083

Query: 1271 RYLKGTPGKGLMFRNRGHIQVEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNV 1330
            RYLKG+PGKGL F+  GH++VE Y DADWA   +DRRSTSGYC FVGGNLV+WRSKKQ V
Sbjct: 1084 RYLKGSPGKGLWFKKNGHLEVEGYCDADWASCPDDRRSTSGYCVFVGGNLVSWRSKKQPV 1143

Query: 1331 VARSSAEAEFRSVAHGFCEVLWIKKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRT 1390
            V+RS+AEAE+R+++    E+LW++  + EL +   TPMK++CDNK+AISIA+NPV HDRT
Sbjct: 1144 VSRSTAEAEYRAMSVSLSELLWLRNLLSELMLPVDTPMKLWCDNKSAISIANNPVQHDRT 1203

Query: 1391 KHVEVDKHFIKEKIDSGEICMSYIPTKSQVADVLTKSL 1428
            KHVE+D+ FIKEK+D G + + ++ +  QVAD  TK L
Sbjct: 1204 KHVELDRFFIKEKLDEGVLELEFVMSGGQVADCFTKGL 1241



 Score =  148 bits (373), Expect = 1e-33
 Identities = 105/371 (28%), Positives = 173/371 (46%), Gaps = 30/371 (8%)

Query: 4   IRLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPDKVGA-DYDTWDAENSMVMTWLVNS 62
           I+L   NY  WS+   L ++ +G  GY+TG+ K+P+   + ++ TW   NS+V+ WL+ S
Sbjct: 49  IKLGVKNYLSWSRRALLILKTKGLEGYVTGEVKEPENTSSVEWKTWSTTNSLVVAWLLTS 108

Query: 63  LTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVTKYFGCLK 122
           L   I       ++A ++W+ ++++YS  GN   + E   ++  +RQ E SV +Y   LK
Sbjct: 109 LIPAIATTVETISSASEMWKTLTKLYSGEGNVMLMVEAQEKISALRQGERSVAEYVAELK 168

Query: 123 RIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILGRNPIPPIG 182
            +W DLD ++    +  +     +K V+  RV +FL GLN EF+  R  +  +  +P + 
Sbjct: 169 SLWSDLDHYDPLGLEHSDCIAKMKKWVERRRVIEFLKGLNPEFEGRRDAMFHQTTLPTLD 228

Query: 183 EVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDKTHLVCDYCG 242
           E  A + +EE +++V+      +  P       A+ Q           G +T   C  CG
Sbjct: 229 EAIAAMAQEELKKKVL-----PSAAPCSPSPTYAIVQ-----------GKETR-ECFNCG 271

Query: 243 RNRHTQETCF----KLHGRPNN-SKAGKFGDRPMPTTSNAASSPFTKEQMDHLLKLLKFN 297
              H    C       +GR     + G  G R     SN       +         L+  
Sbjct: 272 EMGHLMRDCHAPRKPTYGRGRGVDRGGTRGGRGYAGRSNRGRGYGYRGDYKANAVTLEEG 331

Query: 298 SSPNTP--IGTVAQTGKDSW---ALSVQNHSNPWIIDSGASEHMTNCSHLFSSYFPSSGS 352
           SS  TP  +   A +   S+    +S+    + WI+DSGAS H+T  S  F+SY P S +
Sbjct: 332 SSGTTPDNVANFAHSTSGSFNQAFMSMNTSHSSWILDSGASRHVTGMSGEFTSYKPYSFA 391

Query: 353 EK--VKIADGS 361
            K  ++ ADG+
Sbjct: 392 HKETIQTADGT 402


>UniRef100_Q6ATL7 Putative polyprotein [Oryza sativa]
          Length = 1437

 Score =  732 bits (1889), Expect = 0.0
 Identities = 479/1474 (32%), Positives = 756/1474 (50%), Gaps = 116/1474 (7%)

Query: 5    RLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPDKV-------------GADYDTWDAE 51
            +L  +N+  W   +   IRG    G++TGD + P  +               +Y+ W A 
Sbjct: 21   KLGKSNHAVWKAQILATIRGARLEGHLTGDDQPPAPILRRKEGEKEVVVSNPEYEEWVAT 80

Query: 52   NSMVMTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAE 111
            +  V+ +L++S+T+++        TA   W  +  M+  +  +++     L L  +++ +
Sbjct: 81   DQQVLAYLLSSMTKDLLVQVATCRTAASAWSMIQGMFGSM-TRARTINTRLSLSTLQKGD 139

Query: 112  DSVTKYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFL-AGLNVEFDEVRG 170
             ++T Y G ++ +  DL                  K VD   +  ++ AGL+ EF+ V  
Sbjct: 140  MNITTYVGKMRALADDLMAVG--------------KPVDDDELIGYIFAGLDDEFEPVIS 185

Query: 171  RILGRNPIPPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRG 230
             I+GR     IGE +A++   E R    L  +++     V  ++ +  Q      R+  G
Sbjct: 186  TIVGRPDPVTIGETYAQLISFEQR----LAHRRSGDQSSVNSASRSRGQPQRGGSRS--G 239

Query: 231  GDKTHLVCDYCGRNRHTQETCFKLHGRPNN-SKAGKFGDRPMPTTSNAASSPFTKEQMDH 289
            GD         GR            G P+N +  G+    P    +N       + +   
Sbjct: 240  GDSNR------GR------------GAPSNGANRGRGRGNPSGGRANVGGGTDNRPKCQL 281

Query: 290  LLKL----------LKFNSSPNTPI-GTVAQTGKDSWALSVQNHSNPWIIDSGASEHMTN 338
              K              N  P+    GT    G D+           W +D+GA++H+T 
Sbjct: 282  CYKRGHTVCDCWYRYDENFVPDERFAGTAVSYGVDT----------NWYLDTGATDHVTG 331

Query: 339  CSHLFSSYFPSSGSEKVKIADGSYSSIAGKGNIKI---SEQITLQSVLHVPKFACNLLSV 395
                 +      G+++V  A G+   I+  GN  +   S  + L+ VL+VPK   NL+S 
Sbjct: 332  ELDKLTVRDKYHGNDQVHTASGAGMEISHIGNSVVKTPSRNLHLKDVLYVPKANKNLVSA 391

Query: 396  HKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSSRTSPP 455
            +KL+ D+   +   R     +D    +T+   R   GLY        +  +      + P
Sbjct: 392  YKLTSDNLAFIELYRKFFFIKDLAMRRTLLRGRCHKGLYALPSPSSHHHQVKQVYGVTKP 451

Query: 456  LVSNKIMLWHKRLGHPSFSYLKHLFPEFSK---EISSSQFHCDACHLAKDHRVSFNSRGY 512
                    WH RLGHPS++ ++ +    +    ++S     CDAC  AK H++SF     
Sbjct: 452  SFER----WHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDACQKAKSHQLSFPKSTS 507

Query: 513  SASKPFYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNM 572
             +  P  L+ SDVWGP+  +++   K++V+FIDD+++  W+YL++ KSEV  +F +F ++
Sbjct: 508  ESKYPLELVFSDVWGPAP-QSVGNNKYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSL 566

Query: 573  IKNQFHTTIGILRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEV 632
            ++  F+  I  +++D G EY  + L +F    GI H  +C  T QQNG AERK+RH++EV
Sbjct: 567  VERLFNRKIVAMQTDWGGEY--QKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEV 624

Query: 633  TRAIMFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKV 692
              A++   ++P   WG A L+A +LINR PSRVL   +P++ L  + P         L+V
Sbjct: 625  GLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERLLGHKPDYNA-----LRV 679

Query: 693  FGCLCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQ-P 751
            FGC C+  +    + KL  ++  C FLGY++  KG+KC +P T + + S DV F E Q P
Sbjct: 680  FGCACWPNLRPYNKHKLQFRSTTCTFLGYSTLHKGFKCLDPSTGRVYISRDVVFDETQFP 739

Query: 752  FFRENSLQGESQSSNEEDNFWEILPVLDDIVTN--DHLDAKITEPRNPNLELLEHMVFET 809
            F + +   G    +        ++P L   +      + + I  P N N+         T
Sbjct: 740  FTKLHPNVGAKLRAEIA-----LVPELAASLPRGLQQISSVINTPENANVSNENMQQDST 794

Query: 810  GGEEGETLIKNPELRVYVRKKFHKDGTNPIVFPAEV--QSDSPSEGPTDNP-SSSSSGNS 866
               E ET        V         G+ PI  PA    +SDS +  P   P +S+   ++
Sbjct: 795  YDNEPETETDGAPDTVSANAPAESSGSPPINEPASPFGESDSATASPASAPVNSAPHPDA 854

Query: 867  SHSSNDLPDLSFPDINLP-IAVRKNIPDLNIPIAERKRTRTCTKHPMSNYLSYDKLSHSH 925
            + S +  P  S      P +A+    P   +   E +R RT     + + +  +K+    
Sbjct: 855  AASGSSAPRGSTSQGGTPSVAIDDPHPATTVTGQEAQRPRT----RLQSGIRKEKVYTDG 910

Query: 926  KAYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVF 985
                  +++   P  +Q+AL + NWK A+  E  AL KNNTW +      +  + CKWV+
Sbjct: 911  TVKWGMLTSTGEPENLQDALQNNNWKCAMDAEYMALIKNNTWHLVPPQQGRNVIDCKWVY 970

Query: 986  TVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQY 1045
             +K K DGS++RYKARLVAKGF Q +GIDY++TF+PV K  +IRI+LS+AV+  W L Q 
Sbjct: 971  KIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWCLRQL 1030

Query: 1046 DVKNAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGH 1105
            DV+NAFL+G L EEVYM+ PPG+E+      VC+L K+LYGLKQ+PRAW+ R    +   
Sbjct: 1031 DVQNAFLHGVLEEEVYMKQPPGYENPSTPDYVCKLDKALYGLKQAPRAWYSRLSGKLHDL 1090

Query: 1106 GFTQSQADHTMFFKHSREGKIAI-LIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGK 1164
            GF  S+AD ++FF +  +G + I L++YVDDII+       +S L + L+ EF +KDLG 
Sbjct: 1091 GFKGSKADTSLFFYN--KGSLTIFLLIYVDDIIVVSSRKEAVSALLQDLQKEFALKDLGD 1148

Query: 1165 LKYFLGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEII-- 1222
            L YFLG+E  +   GI ++Q KY  DLL    M+ CK+  TP+  + KL +  +  I+  
Sbjct: 1149 LHYFLGIEVTKIPGGILMSQEKYASDLLKRVNMSDCKSVATPLSASEKLIA-GKGTILGP 1207

Query: 1223 -DRERYQRLAGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGL 1281
             D  +Y+ + G L YL+ TR DIAF+V+ + QF+H P   H+ AV RILRY+K   G GL
Sbjct: 1208 NDATQYRSIVGALQYLTLTRLDIAFSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGL 1267

Query: 1282 MFRNRGHIQVEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFR 1341
                   + V  Y+DADWAG ++DRRST G+  ++G NLV+W +KKQ  V+RSS EAE++
Sbjct: 1268 RICKSSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYK 1327

Query: 1342 SVAHGFCEVLWIKKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIK 1401
            ++A+   E++W++  +QEL I  P   +++CDN  A  ++ NPV H RTKH+EVD HF++
Sbjct: 1328 ALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFVR 1387

Query: 1402 EKIDSGEICMSYIPTKSQVADVLTKSLPKRQFDD 1435
            E++    + + Y+ T  QVAD  TK+LP +Q ++
Sbjct: 1388 ERVARKLLQVDYVSTNDQVADGFTKALPVKQLEN 1421


>UniRef100_Q7XKG6 OSJNBb0065J09.3 protein [Oryza sativa]
          Length = 1015

 Score =  721 bits (1861), Expect = 0.0
 Identities = 411/960 (42%), Positives = 566/960 (58%), Gaps = 115/960 (11%)

Query: 391  NLLSVHKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSS 450
            NL+S+  L +  +C V   R  C+ +++ +G+ +G     NGL+Y D +   N A+  + 
Sbjct: 54   NLVSISSLVDHMDCWVTLDRENCLIEERRTGRKLGIGIRQNGLWYLDRSGT-NKALCSAL 112

Query: 451  RTSPPLVSNKIMLWHKRLGHPSFSYLKHLFPEFSKEISSSQFHCDACHLAKDHRVSFNSR 510
                     +++L H RLGH  F  ++ ++P+   ++  S+  CDAC   K  R ++ SR
Sbjct: 113  AVGTSEEEARLILQHCRLGHMCFETMRKIYPDEMSKVDRSKLVCDACEYGKHTRATYISR 172

Query: 511  GYSASKPFYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFF 570
            G  +  PF LIHSDVW  S I ++S  K+FVTFID ++R+ W+YLM+ K+EV + F+DF+
Sbjct: 173  GLRSISPFMLIHSDVW-TSPIVSVSGMKYFVTFIDCYSRMTWIYLMKHKNEVLKCFKDFY 231

Query: 571  NMIKNQFHTTIGILRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLL 630
              ++NQF+T + I+R+DNG EY N    +FL   GI+HQ++C DTP QNG+A +KNRH+L
Sbjct: 232  AFVRNQFNTCVKIIRTDNGKEYVNNEFGSFLSIEGILHQTSCPDTPPQNGVAXKKNRHIL 291

Query: 631  EVTRAIMFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPL 690
            EV R++M++MNVPK+LW  A++TA +LINR PSR+L  + P ++                
Sbjct: 292  EVARSLMYTMNVPKFLWSEAVMTATYLINRTPSRILGMKAPYEM---------------- 335

Query: 691  KVFGCLCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQ 750
             VFGC  ++  P  +R    P  E+        N + Y      T++   S++   VE Q
Sbjct: 336  -VFGCNEFIVPPKNWRK---PHEEE--------NLQVY------TRRKPRSLETQQVEQQ 377

Query: 751  PFFRENSLQGESQSSNEEDNFWEILPVLDDIVTNDHLDAKITEPRNPNLELLEHMVFETG 810
            P   + +   E               V+D+I  ND    + ++P   N         ETG
Sbjct: 378  PLTIDRNEMVEQHQQP---------LVIDEI--NDQSSYQ-SDPIQENT--------ETG 417

Query: 811  GEEGETLIKNPELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSSSGNSSHSS 870
            GEE E   +   L +  RK        P +     + +  +     N  S SS + ++ +
Sbjct: 418  GEESEISGEESNLPIANRKGIRSTAGKPPIRYGFEEVEEENGNDIANYVSYSSLSPAYRA 477

Query: 871  NDLPDLSFPDINLPIAVRKNIPDLNIPIAERKRTRTCTKHPMSNYLSYDKLSHSHKAYVS 930
                  SF  I +P                 K  R     P             H+A + 
Sbjct: 478  F---IASFQSIVIP-----------------KDWREAKNDP-----------KWHEAMME 506

Query: 931  RISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVFTVKCK 990
             +S L   +T         W+L                    P  KK V CKWV  VK  
Sbjct: 507  EMSALEKNKT---------WEL-----------------VPFPTGKKVVSCKWVNAVKQD 540

Query: 991  ADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNA 1050
              G VERYKARLVAKG++QT+GIDY ETFAPVAK++++R L+S A NF+W L+Q DVKNA
Sbjct: 541  PFGKVERYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLYQLDVKNA 600

Query: 1051 FLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQS 1110
            FL+G+L EEVYM +PPGF     +GKV RLKKSLYGLKQSPRAWF+RF   + G G+ Q 
Sbjct: 601  FLHGDLQEEVYMEIPPGFSTSQTKGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGMGYKQC 660

Query: 1111 QADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLG 1170
              DHT+F++H R  KIAIL VYVDDII+TGDD  EI+ LK  +  EF++KDLG+LKYFLG
Sbjct: 661  NGDHTLFYRH-RGKKIAILAVYVDDIIITGDDTQEIAQLKENISKEFEVKDLGQLKYFLG 719

Query: 1171 MEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEIIDRERYQRL 1230
            +E ARS  GI L+QRKY+LDLL +TGM GC+ A TP++ N KL +   D  +++ERYQRL
Sbjct: 720  IEIARSPRGIVLSQRKYVLDLLCDTGMLGCRPASTPIEQNHKLCAELGDP-VNKERYQRL 778

Query: 1231 AGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQ 1290
             GRLIYL HTRPDI +AVSV+S++MH P   H +AV+RILRYLKG+PGKGL F+  GH+ 
Sbjct: 779  VGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDAVYRILRYLKGSPGKGLWFKKNGHLG 838

Query: 1291 VEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEV 1350
            VE Y DADWA +++DRRSTSGYC FVGGNLV+WRSKKQ VV+RS+AEAE+R+++   C +
Sbjct: 839  VEGYCDADWASSLDDRRSTSGYCVFVGGNLVSWRSKKQPVVSRSTAEAEYRAMSGCICRI 898


>UniRef100_Q9SXQ4 Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  700 bits (1806), Expect = 0.0
 Identities = 464/1479 (31%), Positives = 738/1479 (49%), Gaps = 96/1479 (6%)

Query: 5    RLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPD---------KVGADYDTWDAENSMV 55
            +L   NY  WS+ V     G    G++ G    P          +V  DY  W  ++ ++
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLI 84

Query: 56   MTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVT 115
             + ++ +++  +        TA  +WE + ++Y++  +   + +L  QL +  +   ++ 
Sbjct: 85   YSAILGAISMSVQPAVSRATTAAQIWETLRKIYAN-PSYGHVTQLRTQLKQWTKGAKTID 143

Query: 116  KYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILGR 175
             Y       +  L L  +              M    +V + L  L  ++  V  +I  +
Sbjct: 144  DYMQGFITRFDQLALLGK-------------PMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 176  NPIPPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDKTH 235
            +  P + E+   +  +ES+   +L    A V P +  + +     N    +N RG ++ +
Sbjct: 191  DTPPSLTEIHERLINQESK---LLALNSAEVVP-ITANVVTHRNTNTNRNQNNRGDNRNY 246

Query: 236  LVCDYCGRNRHTQETCFKLHGRPNNSKAGKFGDRPMPTTSNAASSPFTKEQMDHLLKLLK 295
                    N + +   ++    P++S +     +P P                   +L +
Sbjct: 247  -------NNNNNRSNSWQ----PSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQ 295

Query: 296  FNSSPNTPIGTVAQTG---KDSWALSVQNHSNPWIIDSGASEHMTNCSHLFSSYFPSSGS 352
            F S+ N    T   T    + + A++   ++N W++DSGA+ H+T+  +  S + P +G 
Sbjct: 296  FQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGG 355

Query: 353  EKVKIADGSYSSIAGKGNIKI---SEQITLQSVLHVPKFACNLLSVHKLSEDSNCSVLFC 409
            + V IADGS   I   G+  +   S  + L  VL+VP    NL+SV++L   +  SV F 
Sbjct: 356  DDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNINKNLISVYRLCNTNRVSVEFF 415

Query: 410  RSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSSRTSPPLVSNKIMLWHKRLG 469
             ++   +D N+G  +   +  + LY +        +MF S     P        WH RLG
Sbjct: 416  PASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFAS-----PCSKATHSSWHSRLG 470

Query: 470  HPSFSYLKHLFPEFSKEI---SSSQFHCDACHLAKDHRVSFNSRGYSASKPFYLIHSDVW 526
            HPS + L  +    S  +   S     C  C + K H+V F++   ++SKP   I+SDVW
Sbjct: 471  HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530

Query: 527  GPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGILRS 586
              S I ++   +++V F+D  TR  W+Y +++KS+V+  F  F ++++N+F T IG L S
Sbjct: 531  S-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYS 589

Query: 587  DNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPKYL 646
            DNG E+    L  +L  +GI H ++   TP+ NG++ERK+RH++E+   ++   +VPK  
Sbjct: 590  DNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTY 647

Query: 647  WGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPNIFR 706
            W  A   A +LINR+P+ +LQ ++P Q L    P         LKVFGC CY ++    R
Sbjct: 648  WPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYE-----KLKVFGCACYPWLRPYNR 702

Query: 707  SKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQ-PFFRENS--LQGESQ 763
             KL+ K+++C F+GY+  +  Y C +  T + + S  V F E   PF   N      + Q
Sbjct: 703  HKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQ 762

Query: 764  SSNEEDNF--WEILPVLDDIVT-----NDHLDAKITEPRNPNLELLEHMVFETGGEEGET 816
             S+   N+     LP    ++        HLD   T PR P+L         +      +
Sbjct: 763  RSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLD---TSPRPPSLPSPLCTTQVSSSNLPSS 819

Query: 817  LIKNPELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSS-SGNSSHSSNDLPD 875
             I +P          +  G  P   P + Q+ + +    +NP+ +S S NS + ++ LP 
Sbjct: 820  SISSPSSSEPTAPSHN--GPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQ 877

Query: 876  --LSFPDI----------NLPIAVRKNIPDLNI-----PIAERKRTRTCTKHPMSNYLSY 918
              +S P I          N P +   + P L       PI +         H M+     
Sbjct: 878  SPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKD 937

Query: 919  DKLSHSHK-AYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTW-CITDLPYDK 976
                 + K +Y + ++    PRT  +A+ D  W+ A+  ++NA   N+TW  +   P   
Sbjct: 938  GIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSKINAQIGNHTWDLVPPPPPSV 997

Query: 977  KAVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAV 1036
              VGC+W+FT K  +DGS+ RYKARLVAKG+ Q  G+DY ETF+PV K  SIRI+L +AV
Sbjct: 998  TIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1057

Query: 1037 NFNWTLHQYDVKNAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFE 1096
            + +W + Q DV NAFL G L +EVYM  PPGF DK     VCRL+K++YGLKQ+PRAW+ 
Sbjct: 1058 DRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYV 1117

Query: 1097 RFGSVVKGHGFTQSQADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAE 1156
               + +   GF  S +D T  F   R   I  ++VYVDDI++TG+D   +      L   
Sbjct: 1118 ELRTYLLTVGFVNSISD-TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQR 1176

Query: 1157 FDIKDLGKLKYFLGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSV 1216
            F +K+   L YFLG+E  R  +G+ L+QR+Y LDLL  T M   K   TPM  + KL   
Sbjct: 1177 FSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1236

Query: 1217 AEDEIIDRERYQRLAGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGT 1276
            +  ++ D   Y+ + G L YL+ TRPD+++AV+ +SQ+MH P   ++ A+ R+LRYL GT
Sbjct: 1237 SGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDNWNALKRVLRYLAGT 1296

Query: 1277 PGKGLMFRNRGHIQVEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSA 1336
            P  G+  +    + + AY+DADWAG+ +D  ST+GY  ++G + ++W SKKQ  V RSS 
Sbjct: 1297 PDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1356

Query: 1337 EAEFRSVAHGFCEVLWIKKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVD 1396
            EAE+RSVA+   E+ WI   + EL I    P  +YCDN  A  +  NPV H R KH+ +D
Sbjct: 1357 EAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALD 1416

Query: 1397 KHFIKEKIDSGEICMSYIPTKSQVADVLTKSLPKRQFDD 1435
             HFI+ ++ SG + + ++ T  Q+AD LTK L +  F +
Sbjct: 1417 YHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQN 1455


>UniRef100_Q94KV0 Polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  696 bits (1797), Expect = 0.0
 Identities = 458/1463 (31%), Positives = 723/1463 (49%), Gaps = 128/1463 (8%)

Query: 3    TIRLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQP-------------DKVGADYDTWD 49
            T++LN +NY  W    +  +     IG++ G    P             D     Y++W 
Sbjct: 18   TLKLNDSNYLLWKTQFESLLSCHKLIGFVNGGITPPPRTLNVVTGDTSVDVANPQYESWF 77

Query: 50   AENSMVMTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQ 109
              + ++ +WL  +L+EE+        T++D+W ++++ ++   + ++ + L   L  + +
Sbjct: 78   CTDQLIRSWLFGTLSEEVLGYVHNLQTSRDIWISLAENFNK-SSVAREFTLRRTLQLLSK 136

Query: 110  AEDSVTKYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVS-RVFKFLAGLNVEFDEV 168
             + +++ Y      +   L                  K VD S ++F FL GL  E+D +
Sbjct: 137  KDKTLSAYCREFIAVCDALSSIG--------------KPVDESMKIFGFLNGLGREYDPI 182

Query: 169  RGRI---LGRNPIPPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSF 225
               I   L +   P   +V +EV+  + + Q              E S  A P   H +F
Sbjct: 183  TTVIQSSLSKISPPTFRDVISEVKGFDVKLQ------------SYEESVTANP---HMAF 227

Query: 226  RNPRGGDKTHLVCDYCGRNRHTQETCF-KLHGRPNNSKAGKFGDRPMPTTSNAASSPFTK 284
               R    +    +Y   NR      + +  GR   S  G+   +    ++N    P  +
Sbjct: 228  NTQR----SEYTDNYTSGNRGKGRGGYGQNRGRSGYSTRGRGFSQHQTNSNNTGERPVCQ 283

Query: 285  EQMDHLLKLLKFNSSPNTPIGTVAQTGKDSWALSVQNHSNP-WIIDSGASEHMTNCSHLF 343
                     LK  +  +    +V  T +   +L V + S   W+ DS A+ H+T+ ++  
Sbjct: 284  ICGRTGHTALKCYNRFDHNYQSV-DTAQAFSSLRVSDSSGKEWVPDSAATAHVTSSTNNL 342

Query: 344  SSYFPSSGSEKVKIADGSYSSIAGKGNIKISEQ---ITLQSVLHVPKFACNLLSVHKLSE 400
             +  P +GS+ V + DG+Y  I   G+  IS     + L  VL  P    +LLSV KL +
Sbjct: 343  QAASPYNGSDTVLVGDGAYLPITHVGSTTISSDSGTLPLNEVLVCPDIQKSLLSVSKLCD 402

Query: 401  DSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSSRTSPPLVSNK 460
            D  C V F  +     D N+ K +      NGLY  +         F S+R      S +
Sbjct: 403  DYPCGVYFDANKVCIIDINTQKVVSKGPRSNGLYVLENQEF---VAFYSNRQCA--ASEE 457

Query: 461  IMLWHKRLGHPSFSYLKHLFPEFSKEISSSQFH----CDACHLAKDHRVSFNSRGYSASK 516
            I  WH RLGH +   L+ L  + SKEIS ++      C+ C + K  ++ F S       
Sbjct: 458  I--WHHRLGHSNSRILQQL--KSSKEISFNKSRMSPVCEPCQMGKSSKLQFFSSNSRELD 513

Query: 517  PFYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQ 576
                IH D+WGPS + +    K++V F+DD++R  W Y ++ KS+    F  F N+++NQ
Sbjct: 514  LLGRIHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQ 573

Query: 577  FHTTIGILRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAI 636
            F+T I + +SD G E+ +  +   L   GI H+ +C  TPQQNGIAERK+RH +E+  ++
Sbjct: 574  FNTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQNGIAERKHRHFVELGLSM 633

Query: 637  MFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCL 696
            MF  + P   W  A  TA  L N +PS  L   +P++ L    P   +     L+VFG  
Sbjct: 634  MFHSHTPLQFWVEAFFTASFLSNMLPSPSLGNVSPLEALLKQKPNYAM-----LRVFGTA 688

Query: 697  CYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQ-PFFRE 755
            CY  +  +   K +P++ +CVFLGY S  KGY+C  P T + + S  V F E+  PF ++
Sbjct: 689  CYPCLRPLGEHKFEPRSLQCVFLGYNSQYKGYRCLYPPTGRVYISRHVIFDEETFPFKQK 748

Query: 756  NSLQGESQSSNEEDNFWEILPVLDDIVTNDHLDAKITEPRNPNLELLEHMVFETGGEEGE 815
                     S+    +   +P  D  +     + KI                       E
Sbjct: 749  YQFLVPQYESSLLSAWQSSIPQADQSLIPQAEEGKI-----------------------E 785

Query: 816  TLIKNPELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSSSGNSSHSSNDLPD 875
            +L K P ++   +       T P +    V ++   E   +   + S    +H+ ND   
Sbjct: 786  SLAKPPSIQ---KNTIQDTTTQPAILTEGVLNEEEEEDSFEETETESLNEETHTQND--- 839

Query: 876  LSFPDINLPIAVRKNIPDLNIPIAERKRTRTCTKHPMSNYLSYDKLSHSHKAYVSRISNL 935
                             +  + + E  +      HPM+   S   +  S+  Y    S  
Sbjct: 840  -----------------EAEVTVEEEVQQEPENTHPMTT-RSKAGIHKSNTRYALLTSKF 881

Query: 936  FV--PRTIQEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVFTVKCKADG 993
             V  P++I EAL  P W  AV +EM  ++  +TW +     D   +GC+WVF  K K DG
Sbjct: 882  SVEEPKSIDEALNHPGWNNAVNDEMRTIHMLHTWSLVQPTEDMNILGCRWVFKTKLKPDG 941

Query: 994  SVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLN 1053
            SV++ KARLVAKGF Q  G+DY ETF+PV +  +IR++L +A    W + Q DV NAFL+
Sbjct: 942  SVDKLKARLVAKGFHQEEGLDYLETFSPVVRTATIRLVLDVATAKGWNIKQLDVSNAFLH 1001

Query: 1054 GELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQAD 1113
            GEL E VYM  PPGF D+     VCRL K+LYGLKQ+PRAWF+   + +   GF+ S++D
Sbjct: 1002 GELKEPVYMLQPPGFVDQEKPSYVCRLTKALYGLKQAPRAWFDTISNYLLDFGFSCSKSD 1061

Query: 1114 HTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEF 1173
             ++F  H + GK  +L++YVDDI++TG D   + +L   L   F +KDLG   YFLG+E 
Sbjct: 1062 PSLFTYH-KNGKTLVLLLYVDDILLTGSDHNLLQELLMSLNKRFSMKDLGAPSYFLGVEI 1120

Query: 1174 ARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEIIDRERYQRLAGR 1233
              S EG+FL+Q  Y  D+L +  M+ C +  TP+  ++  +++  D   +   ++ LAG+
Sbjct: 1121 ESSPEGLFLHQTAYAKDILHQAAMSNCNSMPTPLPQHI--ENLNSDLFPEPTYFRSLAGK 1178

Query: 1234 LIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQVEA 1293
            L YL+ TRPDI FAV+ I Q MH+P  A F  + RILRY+KGT   GL  +   ++ + A
Sbjct: 1179 LQYLTITRPDIQFAVNFICQRMHSPTTADFGLLKRILRYVKGTIHLGLHIKKNQNLSLVA 1238

Query: 1294 YTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEVLWI 1353
            Y+D+DWAG    RRST+G+CT +G NL++W +K+Q  V++SS EAE+R++     E+ W+
Sbjct: 1239 YSDSDWAGCKETRRSTTGFCTLLGCNLISWSAKRQETVSKSSTEAEYRALTAVAQELTWL 1298

Query: 1354 KKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEICMSY 1413
               ++++ +    P  V CDN +A+ ++ NP LH+R+KH + D H+I+E++  G +   +
Sbjct: 1299 SFLLRDIGVTQTHPTLVKCDNLSAVYLSANPALHNRSKHFDTDYHYIREQVALGLVETKH 1358

Query: 1414 IPTKSQVADVLTKSLPKRQFDDM 1436
            I    Q+AD+ TK LP+R F D+
Sbjct: 1359 ISATLQLADIFTKPLPRRAFIDL 1381


>UniRef100_Q9ZT94 Putative polyprotein of LTR transposon [Arabidopsis thaliana]
          Length = 1456

 Score =  693 bits (1789), Expect = 0.0
 Identities = 460/1478 (31%), Positives = 727/1478 (49%), Gaps = 113/1478 (7%)

Query: 5    RLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPD---------KVGADYDTWDAENSMV 55
            +L   NY  WS+ V     G    G++ G    P          +V  DY  W  ++ ++
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLI 84

Query: 56   MTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSD--LGNQSQIYELTLQLGEIRQAEDS 113
             + ++ +++  +        TA  +WE + ++Y++   G+ +Q+  +T            
Sbjct: 85   YSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITR----------- 133

Query: 114  VTKYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRIL 173
                F  L  + + +D   + E                    + L  L  ++  V  +I 
Sbjct: 134  ----FDQLALLGKPMDHDEQVE--------------------RVLENLPDDYKPVIDQIA 169

Query: 174  GRNPIPPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDK 233
             ++  P + E+   +   ES+   +L    A V P +  + +     N    +N RG ++
Sbjct: 170  AKDTPPSLTEIHERLINRESK---LLALNSAEVVP-ITANVVTHRNTNTNRNQNNRGDNR 225

Query: 234  THLVCDYCGRNRHTQETCFKLHGRPNNSKAGKFGDRPMPTTSNAASSPFTKEQMDHLLKL 293
             +        N + +   ++    P++S +     +P P                   +L
Sbjct: 226  NY-------NNNNNRSNSWQ----PSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQL 274

Query: 294  LKFNSSPNTPIGTVAQTG---KDSWALSVQNHSNPWIIDSGASEHMTNCSHLFSSYFPSS 350
             +F S+ N    T   T    + + A++   ++N W++DSGA+ H+T+  +  S + P +
Sbjct: 275  HQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYT 334

Query: 351  GSEKVKIADGSYSSIAGKGNIKI---SEQITLQSVLHVPKFACNLLSVHKLSEDSNCSVL 407
            G + V IADGS   I   G+  +   S  + L  VL+VP    NL+SV++L   +  SV 
Sbjct: 335  GGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVE 394

Query: 408  FCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSSRTSPPLVSNKIMLWHKR 467
            F  ++   +D N+G  +   +  + LY +        +MF S     P        WH R
Sbjct: 395  FFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFAS-----PCSKATHSSWHSR 449

Query: 468  LGHPSFSYLKHLFPEFSKEI---SSSQFHCDACHLAKDHRVSFNSRGYSASKPFYLIHSD 524
            LGHPS + L  +    S  +   S     C  C + K H+V F++   ++SKP   I+SD
Sbjct: 450  LGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSD 509

Query: 525  VWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGIL 584
            VW  S I ++   +++V F+D  TR  W+Y +++KS+V+  F  F ++++N+F T IG L
Sbjct: 510  VWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTL 568

Query: 585  RSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPK 644
             SDNG E+    L  +L  +GI H ++   TP+ NG++ERK+RH++E+   ++   +VPK
Sbjct: 569  YSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPK 626

Query: 645  YLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPNI 704
              W  A   A +LINR+P+ +LQ ++P Q L    P         LKVFGC CY ++   
Sbjct: 627  TYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYE-----KLKVFGCACYPWLRPY 681

Query: 705  FRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQ-PFFRENS--LQGE 761
             R KL+ K+++C F+GY+  +  Y C +  T + + S  V F E   PF   N      +
Sbjct: 682  NRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQ 741

Query: 762  SQSSNEEDNF--WEILPVLDDIVT-----NDHLDAKITEPRNPN---------LELLEHM 805
             Q S+   N+     LP    ++        HLD     P +P+           L    
Sbjct: 742  EQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSS 801

Query: 806  VFETGGEEGETLIKN-PELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSSSG 864
            +      E      N P+      +  + +  +PI+      S SP+    ++P   S  
Sbjct: 802  ISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPI 861

Query: 865  NSSHSSNDLPDLSFPDINLPIAVRKNIPDLNI-----PIAERKRTRTCTKHPMSNYLSYD 919
            +S H     P  S  + N P +   + P L       PI +         H M+      
Sbjct: 862  SSPHIPT--PSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDG 919

Query: 920  KLSHSHK-AYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTW-CITDLPYDKK 977
                + K +Y + ++    PRT  +A+ D  W+ A+  E+NA   N+TW  +   P    
Sbjct: 920  IRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVT 979

Query: 978  AVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVN 1037
             VGC+W+FT K  +DGS+ RYKARLVAKG+ Q  G+DY ETF+PV K  SIRI+L +AV+
Sbjct: 980  IVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVD 1039

Query: 1038 FNWTLHQYDVKNAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFER 1097
             +W + Q DV NAFL G L +EVYM  PPGF DK     VCRL+K++YGLKQ+PRAW+  
Sbjct: 1040 RSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVE 1099

Query: 1098 FGSVVKGHGFTQSQADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEF 1157
              + +   GF  S +D T  F   R   I  ++VYVDDI++TG+D   +      L   F
Sbjct: 1100 LRTYLLTVGFVNSISD-TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRF 1158

Query: 1158 DIKDLGKLKYFLGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVA 1217
             +K+   L YFLG+E  R  +G+ L+QR+Y LDLL  T M   K   TPM  + KL   +
Sbjct: 1159 SVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHS 1218

Query: 1218 EDEIIDRERYQRLAGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTP 1277
              ++ D   Y+ + G L YL+ TRPD+++AV+ +SQ+MH P   H+ A+ R+LRYL GTP
Sbjct: 1219 GTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTP 1278

Query: 1278 GKGLMFRNRGHIQVEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAE 1337
              G+  +    + + AY+DADWAG+ +D  ST+GY  ++G + ++W SKKQ  V RSS E
Sbjct: 1279 DHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTE 1338

Query: 1338 AEFRSVAHGFCEVLWIKKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDK 1397
            AE+RSVA+   E+ WI   + EL I    P  +YCDN  A  +  NPV H R KH+ +D 
Sbjct: 1339 AEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDY 1398

Query: 1398 HFIKEKIDSGEICMSYIPTKSQVADVLTKSLPKRQFDD 1435
            HFI+ ++ SG + + ++ T  Q+AD LTK L +  F +
Sbjct: 1399 HFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQN 1436


>UniRef100_O49145 Polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score =  679 bits (1752), Expect = 0.0
 Identities = 454/1414 (32%), Positives = 711/1414 (50%), Gaps = 81/1414 (5%)

Query: 5    RLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPDKVGA----------DYDTWDAENSM 54
            RL  +N+  WS+ V   + G    GY+ G    P               DY  W  ++ +
Sbjct: 31   RLTDSNFVMWSRQVHALLDGYDLAGYVDGSVPIPPPTRTTDDGVVTTNNDYTLWKRQDKL 90

Query: 55   VMTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSV 114
            V + L+ +++  +        T+ ++WE +S  +++  + + + +L  QL +  +   SV
Sbjct: 91   VYSALLGAISLSVQPLLSKANTSAEVWETLSSTFAN-PSWAHVQQLRQQLKQWTKGTKSV 149

Query: 115  TKYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILG 174
              YF      +  L L      K+PE     ++ +++      L GL  ++  V  +I  
Sbjct: 150  VTYFQGFTTRFDHLALLG----KAPER----EEQIEL-----ILGGLPEDYKTVVDQIES 196

Query: 175  RNPIPPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDKT 234
            R   P + EV  ++   E +   +  K +A    P+  +A     VN++   N       
Sbjct: 197  RENPPALTEVLEKLINHEVK---LAAKAEATSSVPITANA-----VNYRGNNNNNNSRSN 248

Query: 235  HLVCDYCGRNRHTQETCFKLHGRPNNSKAGKFGDRPMPTTSNAASSPFTKEQMDHLLKLL 294
                   GRN     T ++ +    N +  ++  RP        S      +    L+  
Sbjct: 249  -------GRNNSRGNTSWQNNQSTTNRQ--QYTPRPYQGKCQICSVHGHSARRCPQLQQH 299

Query: 295  --KFNSSPNTPIGTVAQTGKDSWALSVQNHSNPWIIDSGASEHMTNCSHLFSSYFPSSGS 352
               + S+ ++         + +   +   +S  W++DSGA+ H+T+  +  + + P +G 
Sbjct: 300  AGSYASNQSSSSSYAPWQPRANMVSATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGG 359

Query: 353  EKVKIADGSYSSIAGKGNIKI---SEQITLQSVLHVPKFACNLLSVHKLSEDSNCSVLFC 409
            E+V IADGS   I+  G+  +   +  + L+ VL+VP    NL+SV+++   +  SV F 
Sbjct: 360  EEVTIADGSGLPISHSGSALLPTPTRSLDLKDVLYVPDIQKNLISVYRMCNTNGVSVEFF 419

Query: 410  RSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSSRTSPPLVSNKIMLWHKRLG 469
             +    +D ++G  +   +  N LY +       T+MF S      L S     WH RLG
Sbjct: 420  PAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPS-----WHARLG 474

Query: 470  HPSFSYLKHLFPEFSKEISSS---QFHCDACHLAKDHRVSFNSRGYSASKPFYLIHSDVW 526
            HPS   LK L  +FS  IS S   Q  C  C + K H++ F S   ++S P   +++DVW
Sbjct: 475  HPSLPILKTLISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW 534

Query: 527  GPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGILRS 586
              S I ++   K+++  +D +TR  W+Y + +KS+V + F  F  +++N+F + IG L S
Sbjct: 535  -TSPITSIDNYKYYLVIVDHYTRYTWLYPLRQKSQVRETFITFTALVENKFKSKIGTLYS 593

Query: 587  DNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPKYL 646
            DNG E+    L +FL ++GI H +T   TP+ NGI+ERK+RH++E    ++ + ++ K  
Sbjct: 594  DNGGEFIA--LRSFLASHGISHMTTPPHTPELNGISERKHRHIVETGLTLLSTASMSKEY 651

Query: 647  WGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPNIFR 706
            W  A  TA +LINRM + VL  E+P   L    P       + L+VFGCLC+ ++     
Sbjct: 652  WSYAFTTAVYLINRMLTPVLGNESPYMKLFGQPP-----NYLKLRVFGCLCFPWLRPYTA 706

Query: 707  SKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVED-QPFFREN-SLQGESQS 764
             KLD ++  CV LGY+ ++  Y C +  T + + S  V F E   PF   + S+   S  
Sbjct: 707  HKLDNRSMPCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESIFPFSTTSPSVTPPSDP 766

Query: 765  SNEEDNFWEILPVLDDIVT-----NDHLDAKITEPRNPNLELLEHMVFETGGEEGETL-I 818
               +D     +P+L   +T     +    A    P  P + L     F+       T  I
Sbjct: 767  PLSQDTRPISVPILARPLTTAPPSSPSCSAPHRSPSQPGI-LSPSAPFQPSPPSSPTSPI 825

Query: 819  KNPELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSSSGNSSHSSNDLPDLSF 878
             +P L        H   T P      V     SE  T   S+S   NS H+ +    ++ 
Sbjct: 826  TSPSLSEESHVG-HNQETGPTGSSPPVSPQPQSEQSTSPRSTSPQPNSPHTQHSPRSITP 884

Query: 879  PDINLPIAVRKNIPDLNIPIAERKRTRTCTKHPMSNYLSYDKLSHSHKAYVSRISNLFVP 938
                 P       P+   PI    RTR+       N +       ++ A         +P
Sbjct: 885  ALTPSPSPSPPPNPNPPPPIQHTMRTRS------KNNIVKPNPKFANLATKPTPLKPIIP 938

Query: 939  RTIQEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVFTVKCKADGSVERY 998
            +T+ EAL DPNW+ A+ +E+NA  +N T+ +     ++  +GCKWVFT+K   +G ++RY
Sbjct: 939  KTVAEALLDPNWRQAMCDEINAQTRNGTFDLVPPAPNQNVIGCKWVFTLKYLPNGVLDRY 998

Query: 999  KARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLNGELHE 1058
            KARLVAKGF Q +G D++ETF+PV K  ++R +L +AV+  W++ Q DV NAFL G L +
Sbjct: 999  KARLVAKGFHQQYGHDFKETFSPVIKSTTVRSVLHVAVSKGWSIRQIDVNNAFLQGTLSD 1058

Query: 1059 EVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQADHTMF- 1117
            EVY+  PPGF DK     VCRL K+LYGLKQ+PRAW++   S +   GF  S AD ++F 
Sbjct: 1059 EVYVMQPPGFVDKDNPHHVCRLHKALYGLKQAPRAWYQELRSYLLTQGFVNSIADTSLFT 1118

Query: 1118 FKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEFARSK 1177
             +H R   I  ++VYVDD+++TG D   I+     L A F +KDLG++ YFLG+E  R+ 
Sbjct: 1119 LRHKR--TILYVLVYVDDMLITGSDTNIITRFIANLAARFSLKDLGEMSYFLGIEATRTS 1176

Query: 1178 EGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEIIDRERYQRLAGRLIYL 1237
            +G+ L Q++Y+LDLL +T M       TPM P  KL   +   +     Y+ + G L YL
Sbjct: 1177 KGLHLMQKRYVLDLLEKTNMLAAHPVLTPMSPTPKLSLTSGTPLDKPSEYRAVLGSLQYL 1236

Query: 1238 SHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQVEAYTDA 1297
            S TRPDIA+AV+ +SQ+MH P   H++A  RILRYL GTP  G+  R    +++ AY+DA
Sbjct: 1237 SFTRPDIAYAVNRLSQYMHCPTDLHWQAAKRILRYLAGTPSHGIFIRADTPLKLHAYSDA 1296

Query: 1298 DWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEVLWIKKFM 1357
            DWAG+ ++  ST+ Y  ++G   ++W SKKQN VARSS EAE+R+VA+   E+ W+   +
Sbjct: 1297 DWAGDTDNYNSTNAYILYLGSTPISWSSKKQNGVARSSTEAEYRAVANATSEIRWVCSLL 1356

Query: 1358 QELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTK 1391
             EL I   +P  VYCDN  A  ++ NPV   R K
Sbjct: 1357 TELGITLSSPPVVYCDNVGATYLSANPVFDSRMK 1390


>UniRef100_Q9SXQ2 Polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  676 bits (1744), Expect = 0.0
 Identities = 435/1319 (32%), Positives = 673/1319 (50%), Gaps = 67/1319 (5%)

Query: 153  RVFKFLAGLNVEFDEVRGRILGRNPIPPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEG 212
            +V + L  L  ++  V  +I  ++  P + E+   +   ES+   +L    A V P +  
Sbjct: 23   QVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESK---LLALNSAEVVP-ITA 78

Query: 213  SALAVPQVNHKSFRNPRGGDKTHLVCDYCGRNRHTQETCFKLHGRPNNSKAGKFGDRPMP 272
            + +     N    +N RG ++ +        N + +   ++    P++S +     +P P
Sbjct: 79   NVVTHRNTNTNRNQNNRGDNRNY-------NNNNNRSNSWQ----PSSSGSRSDNRQPKP 127

Query: 273  TTSNAASSPFTKEQMDHLLKLLKFNSSPNTPIGTVAQTG---KDSWALSVQNHSNPWIID 329
                               +L +F S+ N    T   T    + + A++   ++N W++D
Sbjct: 128  YLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLD 187

Query: 330  SGASEHMTNCSHLFSSYFPSSGSEKVKIADGSYSSIAGKGNIKI---SEQITLQSVLHVP 386
            SGA+ H+T+  +  S + P +G + V IADGS   I   G+  +   S  + L  VL+VP
Sbjct: 188  SGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVP 247

Query: 387  KFACNLLSVHKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAM 446
                NL+SV++L   +  SV F  ++   +D N+G  +   +  + LY +        +M
Sbjct: 248  NIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSM 307

Query: 447  FGSSRTSPPLVSNKIMLWHKRLGHPSFSYLKHLFPEFSKEI---SSSQFHCDACHLAKDH 503
            F S     P        WH RLGHPS + L  +    S  +   S     C  C + K H
Sbjct: 308  FAS-----PCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSH 362

Query: 504  RVSFNSRGYSASKPFYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVE 563
            +V F++   ++SKP   I+SDVW  S I ++   +++V F+D  TR  W+Y +++KS+V+
Sbjct: 363  KVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVK 421

Query: 564  QRFQDFFNMIKNQFHTTIGILRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAE 623
              F  F ++++N+F T IG L SDNG E+    L  +L  +GI H ++   TP+ NG++E
Sbjct: 422  DTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSE 479

Query: 624  RKNRHLLEVTRAIMFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSR 683
            RK+RH++E+   ++   +VPK  W  A   A +LINR+P+ +LQ ++P Q L    P   
Sbjct: 480  RKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYE 539

Query: 684  IITNIPLKVFGCLCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMD 743
                  LKVFGC CY ++    R KL+ K+++C F+GY+  +  Y C +  T + + S  
Sbjct: 540  -----KLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRH 594

Query: 744  VHFVEDQ-PFFRENS--LQGESQSSNEEDNF--WEILPVLDDIVT-----NDHLDAKITE 793
            V F E   PF   N      + Q S+   N+     LP    ++        HLD     
Sbjct: 595  VQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRP 654

Query: 794  PRNPN---------LELLEHMVFETGGEEGETLIKN-PELRVYVRKKFHKDGTNPIVFPA 843
            P +P+           L    +      E      N P+      +  + +  +PI+   
Sbjct: 655  PSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNP 714

Query: 844  EVQSDSPSEGPTDNPSSSSSGNSSHSSNDLPDLSFPDINLPIAVRKNIPDLNI-----PI 898
               S SP+    ++P   S  +S H     P  S  + N P +   + P L       PI
Sbjct: 715  NPNSPSPNSPNQNSPLPQSPISSPHIPT--PSTSISEPNSPSSSSTSTPPLPPVLPAPPI 772

Query: 899  AERKRTRTCTKHPMSNYLSYDKLSHSHK-AYVSRISNLFVPRTIQEALGDPNWKLAVKEE 957
             +         H M+          + K +Y + ++    PRT  +A+ D  W+ A+  E
Sbjct: 773  IQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSE 832

Query: 958  MNALNKNNTW-CITDLPYDKKAVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDYQ 1016
            +NA   N+TW  +   P     VGC+W+FT K  +DGS+ RYKARLVAKG+ Q  G+DY 
Sbjct: 833  INAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYA 892

Query: 1017 ETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLNGELHEEVYMRLPPGFEDKLGRGK 1076
            ETF+PV K  SIRI+L +AV+ +W + Q DV NAFL G L +EVYM  PPGF DK     
Sbjct: 893  ETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDY 952

Query: 1077 VCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQADHTMFFKHSREGKIAILIVYVDDI 1136
            VCRL+K++YGLKQ+PRAW+    + +   GF  S +D T  F   R   I  ++VYVDDI
Sbjct: 953  VCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD-TSLFVLQRGRSIIYMLVYVDDI 1011

Query: 1137 IMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEFARSKEGIFLNQRKYILDLLTETG 1196
            ++TG+D   +      L   F +K+   L YFLG+E  R  +G+ L+QR+Y LDLL  T 
Sbjct: 1012 LITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTN 1071

Query: 1197 MTGCKAAETPMDPNVKLKSVAEDEIIDRERYQRLAGRLIYLSHTRPDIAFAVSVISQFMH 1256
            M   K   TPM  + KL   +  ++ D   Y+ + G L YL+ TRPD+++AV+ +SQ+MH
Sbjct: 1072 MLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMH 1131

Query: 1257 APGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQVEAYTDADWAGNINDRRSTSGYCTFV 1316
             P   H+ A+ R+LRYL GTP  G+  +    + + AY+DADWAG+ +D  ST+GY  ++
Sbjct: 1132 MPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYL 1191

Query: 1317 GGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEVLWIKKFMQELKIAGPTPMKVYCDNKA 1376
            G + ++W SKKQ  V RSS EAE+RSVA+   E+ WI   + EL I    P  +YCDN  
Sbjct: 1192 GHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVG 1251

Query: 1377 AISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEICMSYIPTKSQVADVLTKSLPKRQFDD 1435
            A  +  NPV H R KH+ +D HFI+ ++ SG + + ++ T  Q+AD LTK L +  F +
Sbjct: 1252 ATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQN 1310


>UniRef100_Q9ZQK0 Putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1664

 Score =  676 bits (1743), Expect = 0.0
 Identities = 432/1265 (34%), Positives = 658/1265 (51%), Gaps = 127/1265 (10%)

Query: 4    IRLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPDK--------VGADYDTWDAENSMV 55
            + L G NY  W+++ +  +  RG   +I   +   +         V    + W  E+  V
Sbjct: 11   VTLKGVNYLLWARTTKTTLCSRGLWAHILTSEAPSEATIREGMEIVHVGEEKWFQEDQSV 70

Query: 56   MTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVT 115
            +  L NSL   +   Y    TAK+LWE +  ++ +  N S+++E+   + ++ Q +   T
Sbjct: 71   LALLQNSLEASLLEAYSYCETAKELWETLFNVFGNQSNLSRVFEVKKAINDLSQGDMEFT 130

Query: 116  KYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILGR 175
            ++FG  + +W +L++       +  D K   +  +  +VF  L  L+  ++++   +L  
Sbjct: 131  QHFGKFRSLWAELEMLRP----NTLDPKVLIERREQDKVFGLLLTLSSTYNDLIKHLLRA 186

Query: 176  NPIPPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDKTH 235
            + +P + EV +++++E++ R                         N+K   N     K  
Sbjct: 187  DKLPNLEEVCSQIQKEQANRG------------------------NYKYDNN-----KKA 217

Query: 236  LVCDYCGRNRHTQETCFKLHG---------RPNNSKAGKFGDRPMPTTSN---------- 276
            L C++C R+ HT+E C+ LH          R N      FG +    TSN          
Sbjct: 218  LWCEHCKRSGHTKEKCWTLHPHLRPGRREPRANQVTGENFGTQEQSGTSNQHLGGNGAAM 277

Query: 277  -AASSPFTKEQMDHLLKLLKFNSSPNTPIGTVAQTGKDSWALSVQNHSNPWIIDSGASEH 335
             A+S    +  +  L+K LK +S            GK   ALS      P IIDSGAS H
Sbjct: 278  AASSDLVRRSDLKALIKALKESS------------GKSYHALS---SLKPLIIDSGASHH 322

Query: 336  MTNCSHLFSSYFPSSGSEKVKIADGSYSSIAGKGNIKISEQITLQSVLHVPKFACNLLSV 395
            M + S L S+  P+ G+  V IA+G    + G G++ + ++ +     ++P F  NLLSV
Sbjct: 323  MISDSKLISNIEPALGN--VVIANGDRIPVKGVGDLDLFDKSS--KAFYMPTFTSNLLSV 378

Query: 396  HKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSSRTSPP 455
             K + D NC  +F  +   FQD  + + +G     +GLY  ++T     ++  SS  S  
Sbjct: 379  KKATTDLNCYAIFGPNEVHFQDIETSRVLGQGVTKDGLYVLEDT---KPSVPLSSHFSSI 435

Query: 456  LVSNKIMLWHKRLGHPSFSYLKHLFPEFSKEISSSQFHCDACHLAKDHRVSFNSRGYSAS 515
            L +     WH RLGHP    LK L P      S     C+AC L K  +  F        
Sbjct: 436  LGNANSESWHARLGHPHSRALKLLLPS----TSFKNDECEACILGKHCKSVFPKSSTIYE 491

Query: 516  KPFYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKN 575
            K F LIHSDVW  S   +    K+FVTFID+ ++  W  L+  K  V + F +F   + N
Sbjct: 492  KCFDLIHSDVW-TSPCLSRENHKYFVTFIDEKSKFTWFTLLPSKDRVLEAFTNFQTYVTN 550

Query: 576  QFHTTIGILRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRA 635
             +   I ILRSDN  EY +      L  +GIIHQ++C  TPQQNG+AERKNRHL+EV R 
Sbjct: 551  HYDAKIKILRSDNRGEYTSHAFKQHLNKHGIIHQTSCPYTPQQNGVAERKNRHLMEVRRV 610

Query: 636  IMFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGC 695
            +MF  NVPK+ W + +++AC+LIN+ P+++L   +P +VL    P         L+VFGC
Sbjct: 611  MMFHTNVPKHFWIDGVVSACYLINQTPTKILLDSSPFEVLNKVKPFIN-----HLRVFGC 665

Query: 696  LCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQPFFRE 755
            +C+V I    R+KL PK+ K +F+GY+ N+KGYKC+   T+K   S DV F+E + ++ +
Sbjct: 666  VCFVLISGEQRNKLQPKSTKGMFIGYSINQKGYKCYVLETRKVLISRDVKFLESKSYYDK 725

Query: 756  NSLQG-ESQSSNEEDNFWEILPVLDDI-VTNDHLDAKITEPRNPNLELL---EHMVFETG 810
             + +  +  + +  D    +  +L+ + V+N       T PR  N E +   E+M  E  
Sbjct: 726  KNWEDIQDLTDSPSDRATNLRIILERLGVSNIQTQ---TTPRTSNPETITQPENMEEEEE 782

Query: 811  GEEGETLIKNPELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTD--NPSSSSSGNSSH 868
             EE E   +  E                ++   E +S    E  T   N  +  + N   
Sbjct: 783  EEEEEEEKQGKE--------------QELITLEETESSKVQEKDTSLLNDDNGHTNNQEE 828

Query: 869  SSNDLPDLSFPDINLPIAVRKNIPDLNIPIAERKRTRTCTKHPMSNYLSYDKLSHSHKAY 928
             SN   +   P  +      +++ D  +    +       +HP+    +   L   H+ +
Sbjct: 829  DSNSREEPRIPRRS------EHLKDKRVYYNNQVYFDNVVEHPIQVVCTLAHLPEEHQVF 882

Query: 929  VSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVFTVK 988
              ++   ++P+T +EA+    W+ A+  E  A+  N+TW   +LP  KK V  KWVF +K
Sbjct: 883  FGKVDQHWIPQTYEEAITHQVWRDAIAAEKQAMENNHTWDEDELPRGKKVVTSKWVFAIK 942

Query: 989  CKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVK 1048
             K+DG +ERYKARLVA+GFTQT+G DY +TFAPVAK++++R++LSL  N  W L Q DVK
Sbjct: 943  YKSDGEIERYKARLVARGFTQTYGEDYLDTFAPVAKLHTVRVVLSLTTNLEWDLWQMDVK 1002

Query: 1049 NAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFT 1108
            NAFL GEL E+VYM+ PPG ED     KV +LKK++YGLKQSPRAW+ +  + + G GF 
Sbjct: 1003 NAFLQGELEEKVYMKPPPGLEDINAPNKVFKLKKAIYGLKQSPRAWYHKLSTTLMGRGFK 1062

Query: 1109 QSQADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYF 1168
            +S+AD+T+F   S++G I +++VYVDDII++G+D   I D K  L++ FDIKDLG+LKYF
Sbjct: 1063 RSEADNTLFTLPSQKG-IVVILVYVDDIIISGNDKVGIQDTKTFLKSVFDIKDLGELKYF 1121

Query: 1169 LGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDE---IIDRE 1225
            LG+E  RSKEG+FL+QRKY LDLL + G  G K A+TP++ + K K   E +     D  
Sbjct: 1122 LGIEVCRSKEGLFLSQRKYTLDLLAQVGKLGVKPAKTPLEDDYKAKRKGEHDNKPFEDAT 1181

Query: 1226 RYQRL 1230
            RY+RL
Sbjct: 1182 RYRRL 1186



 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 31/62 (50%), Positives = 43/62 (69%)

Query: 1365 PTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEICMSYIPTKSQVADVL 1424
            P P+ ++CDN+AAI IA N V H+RTKH+EVD H ++E++  G I   Y   + Q+ADV 
Sbjct: 1194 PNPIPMHCDNQAAIHIASNSVFHERTKHIEVDCHKVREQVQLGVILPHYTEGEEQLADVF 1253

Query: 1425 TK 1426
            TK
Sbjct: 1254 TK 1255


>UniRef100_Q8RZ67 Putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa]
          Length = 1448

 Score =  666 bits (1718), Expect = 0.0
 Identities = 403/1142 (35%), Positives = 634/1142 (55%), Gaps = 60/1142 (5%)

Query: 326  WIIDSGASEHMTNCSHLFSSYFPSSGSEKVKIADGSYSSIAGKGNIKI---SEQITLQSV 382
            W ID+GA++H+T      ++    +G E++  A G+   I+  G+  +   S  I L +V
Sbjct: 325  WYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNV 384

Query: 383  LHVPKFACNLLSVHKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLG 442
            L+VP+   NL+S  +L+ D++  +         +DQ +   +   +  +GLY   ++   
Sbjct: 385  LYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPKS--- 441

Query: 443  NTAMFGSSRTSPPLVSNKIML--WHKRLGHPSFSYLKHLFPEFSKEISS---SQFHCDAC 497
                FG S     L + K+ L  WH RLGHPS   +K +    +   S    +Q  C+AC
Sbjct: 442  ----FGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNAC 497

Query: 498  HLAKDHRVSFNSRGYSASKPFYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLME 557
              AK H++ +      +  P  L+ SDVWGP+  +++ R K++V+FIDD ++  W+YL++
Sbjct: 498  QEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLK 556

Query: 558  KKSEVEQRFQDFFNMIKNQFHTTIGILRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQ 617
             KSEV ++F++F  +++  F   I  +++D G EY  + L++F    GI H  +C  T Q
Sbjct: 557  YKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEY--QKLNSFFAQIGIDHHVSCPHTHQ 614

Query: 618  QNGIAERKNRHLLEVTRAIMFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQN 677
            QNG AERK++H++EV  +++   ++P   W  A + A +LINR+PS+ +Q  TP++ L N
Sbjct: 615  QNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLFN 674

Query: 678  NFPTSRIITNIPLKVFGCLCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKK 737
              P         L+VF C C+ ++      KL  ++++CVFLG++++ KG+K  +  + +
Sbjct: 675  QKPDYS-----SLRVFSCTCWPHLHPYNTHKLQFRSKQCVFLGFSTHHKGFKFLDVSSGR 729

Query: 738  FFESMDVHFVEDQ-PFFRENSLQGESQSSNEEDNFWEILPVLDDIVTN--------DHLD 788
             + S DV F E+  PF   +S  G    S       EIL +L   +TN         H+ 
Sbjct: 730  VYISRDVVFDENVFPFSTLHSNAGARLRS-------EIL-LLPSPLTNYNTVSAGGTHIV 781

Query: 789  AKITEPRNPNLELLEHMVFETGGEEGETLIKNPELRVYVRKKFHKD------GTNPIVF- 841
            A +     P+  L+ +    T GE      +  E    +    H +       + P++  
Sbjct: 782  APVANTPLPSDNLISNAADVTSGENSAAHEQEMENEQEIENVMHGNDVHGDAASGPVLDQ 841

Query: 842  PAEVQSDSPSEGPTDNPSSSSSGNSSHSSNDLPDLSFPDINLPIAVRKNI----PDLNIP 897
            P    S +P +G   N S + SG +S +  D   L     N   A  +      PD+   
Sbjct: 842  PTADSSTAPDQGA--NTSDAVSGAASDAGGDTATLGAGAANGAAAGGEESQPVPPDVTGT 899

Query: 898  IAERKRTRTCTKHPMSNYLSYDKLSHSHKAYVSRISNLFVPRTIQEALGDPNWKLAVKEE 957
            +A      +     + + +  +K+  +        S+   P+  +EALGD NW+ A++ E
Sbjct: 900  VAATVAPASRPHTRLRSGIRKEKVYTNGTVKYGCFSSTGEPQNDKEALGDKNWRDAMETE 959

Query: 958  MNALNKNNTWCITDLPYDK--KAVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDY 1015
             NAL KN+TW +  +PY+K    +GCKWV+ VK KADG+++RYK RL+AKGF Q +GIDY
Sbjct: 960  YNALIKNDTWHL--VPYEKGQNIIGCKWVYKVKRKADGTLDRYKTRLIAKGFKQRYGIDY 1017

Query: 1016 QETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLNGELHEEVYMRLPPGFEDKLGRG 1075
            ++TF+PV K  +IRI+LS+AV+  W+L Q DV+N FL+G L EEVYM+ PPGFE      
Sbjct: 1018 EDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNDFLHGFLEEEVYMQQPPGFESSSKPD 1077

Query: 1076 KVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQADHTMFFKHSREGKIAILIVYVDD 1135
             VC+L K+LYGLKQ+PRAW+ R    +   GF  S+AD ++FF  ++ G I  ++VYVDD
Sbjct: 1078 YVCKLNKALYGLKQAPRAWYSRLSKKLTELGFEASKADTSLFFL-NKGGIIMFVLVYVDD 1136

Query: 1136 IIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEFARSKEGIFLNQRKYILDLLTET 1195
            II+        + L + L  EF +KDLG L YFLG+E  +   G+ L Q KY  D+L   
Sbjct: 1137 IIVASSTEKATTALLKDLNKEFTLKDLGDLHYFLGIEVTKVSNGVILTQEKYANDMLKRV 1196

Query: 1196 GMTGCKAAETPMDPNVKLKSVAEDEI--IDRERYQRLAGRLIYLSHTRPDIAFAVSVISQ 1253
             M+ CK   TP+  + KL       +   D  +Y+ + G L YL+ TRPDIA++V+ + Q
Sbjct: 1197 NMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQ 1256

Query: 1254 FMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQVEAYTDADWAGNINDRRSTSGYC 1313
            F+HAP  +H+ AV RILRYL      GL         V  Y+DAD AG+I+DR+ST G+ 
Sbjct: 1257 FLHAPTTSHWIAVKRILRYLNQCTSLGLHVHKSASTLVHGYSDADGAGSIDDRKSTGGFA 1316

Query: 1314 TFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEVLWIKKFMQELKIAGPTPMKVYCD 1373
             F+G NLV+W ++KQ  V+RSS EAE+++VA+   E++W++  ++EL I  P   K++CD
Sbjct: 1317 VFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTVLKELGIESPKAAKIWCD 1376

Query: 1374 NKAAISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEICMSYIPTKSQVADVLTKSLPKRQF 1433
            N  A  ++ NPV H +TKH+ VD HF++E++    + + ++P+  QVAD  TK+L  R  
Sbjct: 1377 NLGAKYLSANPVFHAKTKHIHVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKALSARLL 1436

Query: 1434 DD 1435
            ++
Sbjct: 1437 EN 1438



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 37/197 (18%), Positives = 85/197 (42%), Gaps = 27/197 (13%)

Query: 5   RLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPD-------------KVGADYDTWDAE 51
           +L  AN+  W   V   + G   +GY+ GD K P+             K    ++ W+A 
Sbjct: 24  KLGKANHALWKAQVSAAVHGARLLGYLNGDIKAPNAEISVTIDGKTTTKPNPAFEDWEAN 83

Query: 52  NSMVMTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAE 111
           + +V+ +L++SL+ ++        TA + W N+  +YS  G +++     L L   ++  
Sbjct: 84  DQLVLGYLLSSLSRDVLIQVATCKTAAEAWRNIEALYS-TGTRARAVNTRLALTNTKKGT 142

Query: 112 DSVTKYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGR 171
             + +Y   ++ +  ++                 + + +   V   +AGLN +F  +   
Sbjct: 143 MKIAEYVAKMRALCDEM-------------AAGGRPLDEEGLVQYIIAGLNEDFSPIVSN 189

Query: 172 ILGRNPIPPIGEVFAEV 188
           +  ++    +GE+++++
Sbjct: 190 LCNKSDPITVGELYSQL 206


>UniRef100_O24438 Retrofit [Oryza longistaminata]
          Length = 1445

 Score =  662 bits (1709), Expect = 0.0
 Identities = 407/1142 (35%), Positives = 633/1142 (54%), Gaps = 73/1142 (6%)

Query: 326  WIIDSGASEHMTNCSHLFSSYFPSSGSEKVKIADGSYSSIAGKGNIKI---SEQITLQSV 382
            W ID+GA++H+T      ++    +G E++  A G+   I+  G+  +   S  I L +V
Sbjct: 321  WYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNV 380

Query: 383  LHVPKFACNLLSVHKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLG 442
            L+VP+   NL+S  +L+ D++  +         +DQ +   +   +  +GLY   +    
Sbjct: 381  LYVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPK---- 436

Query: 443  NTAMFGSSRTSPPLVSNKIML--WHKRLGHPSFSYLKHLFPEFSKEISS---SQFHCDAC 497
                FG S     L + K+ L  WH RLGHPS   +K +    +   S    +Q  C+AC
Sbjct: 437  ---FFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNAC 493

Query: 498  HLAKDHRVSFNSRGYSASKPFYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLME 557
              AK H++ +      +  P  L+ SDVWGP+  +++ R K++V+FIDD ++  W+YL++
Sbjct: 494  QEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLK 552

Query: 558  KKSEVEQRFQDFFNMIKNQFHTTIGILRSD-NGTEYFNKYLSTFLVTNGIIHQSTCRDTP 616
             KSEV ++F++F  +++  F   I  +++D  G  Y  + L++F    G+I         
Sbjct: 553  YKSEVFEKFKEFQALVERMFDRKIIAMQTDWRGGRY--QKLNSFFAQIGLIIMCHVLTLI 610

Query: 617  QQNGIAERKNRHLLEVTRAIMFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQ 676
            +QNG AERK+RH++EV  +++   ++P   W  A + A +LINR+PS+ +Q  TP++ L 
Sbjct: 611  RQNGSAERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLF 670

Query: 677  NNFPTSRIITNIPLKVFGCLCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTK 736
            N  P         L+VFGC C+ ++      KL  ++++CVFLG++++ KG+KC +  + 
Sbjct: 671  NQKPDYS-----SLRVFGCACWPHLRPYNTHKLQFRSKQCVFLGFSTHHKGFKCLDVSSG 725

Query: 737  KFFESMDVHFVEDQ-PFFRENSLQGESQSSNEEDNFWEILPVLDDIVTN--------DHL 787
            + + S DV F E+  PF   +S  G    S       EIL +L   +TN         H+
Sbjct: 726  RVYISRDVVFDENVFPFSTLHSNAGARLRS-------EIL-LLPSPLTNYNTASAGGTHV 777

Query: 788  DAKITEPRNPNLELLEHMVFETGGEEGETLIKNPELRVYVRKKFHKD------GTNPIVF 841
             A +     P+  L+ +    T GE      +  E    +    H +       + P++ 
Sbjct: 778  VAPVANTPLPSDNLISNAADVTSGENSAAHEQEMENEQEIENVMHGNDVHGDAASGPVLD 837

Query: 842  -PAEVQSDSPSEGPTDNPSSSSSGNSSHSSNDLPDLSFPDINLPIAVRKNI----PDLN- 895
             P    S +P +G   + S + SG +S +  D   L     N   A  +      PD+  
Sbjct: 838  QPTADSSTAPDQGA--DTSDAVSGAASDAGGDTATLGAGAANSAAAGGEESQPVQPDVTG 895

Query: 896  -----IPIAERKRTRTCTKHPMSNYLSYDKLSHSHKAYVSRISNLFVPRTIQEALGDPNW 950
                 +  A R  TR      + + +  +K+           S+   P+  +EALGD NW
Sbjct: 896  TVLATVAPASRPHTR------LRSGIRKEKVYTDGTVKYGCFSSTGEPQNDKEALGDKNW 949

Query: 951  KLAVKEEMNALNKNNTWCITDLPYDK--KAVGCKWVFTVKCKADGSVERYKARLVAKGFT 1008
            + A++ E NAL KN+TW +  +PY+K    +GCKWV+ +K KADG+++RYKARLVAKGF 
Sbjct: 950  RDAMETEYNALIKNDTWHL--VPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFK 1007

Query: 1009 QTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLNGELHEEVYMRLPPGF 1068
            Q +GIDY++TF+PV K  +IRI+LS+AV+  W+L Q DV+NAFL+G L EEVYM+ PPGF
Sbjct: 1008 QRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGF 1067

Query: 1069 EDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQADHTMFFKHSREGKIAI 1128
            E       VC+L K+LYGLKQ+PRAW+ R    +   GF  S+AD ++FF  ++ G +  
Sbjct: 1068 ESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFL-NKGGILMF 1126

Query: 1129 LIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEFARSKEGIFLNQRKYI 1188
            ++VYVDDII+        + L + L  EF +KDLG L YFLG+E  +   G+ L Q KY 
Sbjct: 1127 VLVYVDDIIVASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYA 1186

Query: 1189 LDLLTETGMTGCKAAETPMDPNVKLKSVAEDEI--IDRERYQRLAGRLIYLSHTRPDIAF 1246
             DLL    M+ CK   TP+  + KL       +   D  +Y+ + G L YL+ TRPDIA+
Sbjct: 1187 NDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAY 1246

Query: 1247 AVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQVEAYTDADWAGNINDR 1306
            +V+ + QF+HAP  +H+ AV RILRYL      GL         V  Y+DADWAG+I+DR
Sbjct: 1247 SVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDR 1306

Query: 1307 RSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEVLWIKKFMQELKIAGPT 1366
            +ST G+  F+G NLV+W ++KQ  V+RSS EAE+++VA+   E++W++  ++EL I  P 
Sbjct: 1307 KSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPK 1366

Query: 1367 PMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEICMSYIPTKSQVADVLTK 1426
              K++CDN  A  ++ NPV H RTKH+EVD HF++E++    + + ++P+  QVAD  TK
Sbjct: 1367 AAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTK 1426

Query: 1427 SL 1428
            +L
Sbjct: 1427 AL 1428



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 40/197 (20%), Positives = 85/197 (42%), Gaps = 27/197 (13%)

Query: 5   RLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPD-------------KVGADYDTWDAE 51
           +L  AN+  W   V   +RG   +GY+ GD K PD             K    ++ W+A 
Sbjct: 24  KLGKANHALWKAQVSAAVRGARLLGYLNGDIKAPDAELSVTIDGKTTTKPNPAFEDWEAN 83

Query: 52  NSMVMTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAE 111
           + +V+ +L++SL+ ++        TA + W ++  +YS  G +++     L L   ++  
Sbjct: 84  DQLVLGYLLSSLSRDVLIQVATCKTAAEAWRSIEALYS-TGTRARAVNTRLALTNTKKGT 142

Query: 112 DSVTKYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGR 171
             + +Y   ++ +  ++           ED   Y            +AGLN +F  +   
Sbjct: 143 MKIAEYVAKMRALGDEMAAGGHP--LDEEDLVQY-----------IIAGLNEDFSPIVSN 189

Query: 172 ILGRNPIPPIGEVFAEV 188
           +  ++    +GE+++++
Sbjct: 190 LCNKSDPITVGELYSQL 206


>UniRef100_Q9SXQ5 Polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  652 bits (1682), Expect = 0.0
 Identities = 446/1444 (30%), Positives = 711/1444 (48%), Gaps = 98/1444 (6%)

Query: 5    RLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPD---------KVGADYDTWDAENSMV 55
            +L   NY  WS+ V     G    G++ G    P          +V  DY  W  ++ ++
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLI 84

Query: 56   MTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVT 115
             + ++ +++  +        TA  +WE + ++Y++  +   + +L  QL +  +   ++ 
Sbjct: 85   YSAILGAISMSVQPAVSRATTAAQIWETLRKIYAN-PSYGHVTQLRTQLKQWTKGAKTID 143

Query: 116  KYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILGR 175
             Y       +  L L  +              M    +V + L  L  ++  V  +I  +
Sbjct: 144  DYMQGFITRFDQLALLGK-------------PMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 176  NPIPPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALAVPQVNHKSFRNPRGGDKTH 235
            +  P + E+   +  +ES+   +L    A V P +  + +     N    +N RG ++ +
Sbjct: 191  DTPPSLTEIHERLINQESK---LLALNSAEVVP-ITANVVTHRNTNTNRNQNNRGDNRNY 246

Query: 236  LVCDYCGRNRHTQETCFKLHGRPNNSKAGKFGDRPMPTTSNAASSPFTKEQMDHLLKLLK 295
                    N + +   ++    P++S +     +P P                   +L +
Sbjct: 247  -------NNNNNRSNSWQ----PSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQ 295

Query: 296  FNSSPNTPIGTVAQTG---KDSWALSVQNHSNPWIIDSGASEHMTNCSHLFSSYFPSSGS 352
            F S+ N    T   T    + + A++   ++N W++DSGA+ H+T+  +  S + P +G 
Sbjct: 296  FQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGG 355

Query: 353  EKVKIADGSYSSIAGKGNIKI---SEQITLQSVLHVPKFACNLLSVHKLSEDSNCSVLFC 409
            + V IADGS   I   G+  +   S  + L  VL+VP    NL+SV++L   +  SV F 
Sbjct: 356  DDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFF 415

Query: 410  RSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAMFGSSRTSPPLVSNKIMLWHKRLG 469
             ++   +D N+G  +   +  + LY +        +MF S  +     S     WH RLG
Sbjct: 416  PASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHCS-----WHSRLG 470

Query: 470  HPSFSYLKHLFPEFSKEI---SSSQFHCDACHLAKDHRVSFNSRGYSASKPFYLIHSDVW 526
            HPS + L  +    S  +   S     C  C + K H+V F++   ++SKP   I+SDVW
Sbjct: 471  HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530

Query: 527  GPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGILRS 586
              S I ++   +++V F+D  TR  W+Y +++KS+V+  F  F ++++N+F T IG L S
Sbjct: 531  S-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYS 589

Query: 587  DNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPKYL 646
            DNG E+    L  +L  +GI H ++   TP+ NG++ERK+RH++E+   ++   +VPK  
Sbjct: 590  DNGGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTY 647

Query: 647  WGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPNIFR 706
            W  A   A +LINR+P+ +LQ ++P Q L    P         LKVFGC CY ++    R
Sbjct: 648  WLYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYE-----KLKVFGCACYPWLRPYNR 702

Query: 707  SKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQ-PFFRENSLQGESQSS 765
             KL+ K+++C F+GY+  +  Y C +  T + + S  V F E   PF   N     SQ  
Sbjct: 703  HKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQ 762

Query: 766  NEED-NFWE---ILPVLDDIVT-----NDHLDAKITEPRNPNLELLEHMVFETGGEEGET 816
              +  + W     LP    ++        HLD   T PR P+          +      +
Sbjct: 763  RSDSASNWPSHTTLPTTPLVLPAPPCLGPHLD---TSPRPPSSPSPLCTTQVSSSNLPSS 819

Query: 817  LIKNPELRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSSSS-SGNSSHSSNDLPD 875
             I +P         ++  G  P   P + Q+ + +    +NP+ +S S NS + ++ LP 
Sbjct: 820  SISSPSSSEPTAPSYN--GPQPTTQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQ 877

Query: 876  --LSFPDI----------NLPIAVRKNIPDLNI-----PIAERKRTRTCTKHPMSNYLSY 918
              +S P I          N P +   + P L       PI +         H M+     
Sbjct: 878  SPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKD 937

Query: 919  DKLSHSHK-AYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTW-CITDLPYDK 976
                 + K +Y + ++    PRT  +A+ D  W+ A+  E+NA   N+TW  +   P   
Sbjct: 938  GIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSV 997

Query: 977  KAVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAV 1036
              VGC+W+FT K  +DGS+ RYKARLVAKG+ Q  G+DY ETF+PV K  SIRI+L +AV
Sbjct: 998  TIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAV 1057

Query: 1037 NFNWTLHQYDVKNAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFE 1096
            + +W + Q DV NAFL G L +E+YM  PPGF DK      CRLKK++YGLKQ+PRAW+ 
Sbjct: 1058 DRSWPIRQLDVNNAFLQGTLTDELYMSQPPGFVDKNRPDYFCRLKKAIYGLKQAPRAWYV 1117

Query: 1097 RFGSVVKGHGFTQSQADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAE 1156
               + +   GF  S +D T  F   R   I  ++VYVDDI++TG+D   +      L   
Sbjct: 1118 ELQTYLLTVGFVNSISD-TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQR 1176

Query: 1157 FDIKDLGKLKYFLGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSV 1216
            F +K+   L YFLG+E  R  +G+ L+QR+Y LDLL  T M   K   TPM  + KL   
Sbjct: 1177 FSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1236

Query: 1217 AEDEIIDRERYQRLAGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGT 1276
            +  ++ D   Y+ + G L YL+ TRPD+++AV+ +SQ+MH P   H+ A+ R+LRYL GT
Sbjct: 1237 SGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGT 1296

Query: 1277 PGKGLMFRNRGHIQVEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSA 1336
            P  G+  +    + + AY+DADWAG+ +D  ST+GY  ++G + ++W SKKQ  V RSS 
Sbjct: 1297 PDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1356

Query: 1337 EAEFRSVAHGFCEVLWIKKFMQELKIAGPTPMKVYCDNKAA-ISIAHNPV-LHDRTKHVE 1394
            EAE+RSVA+   E+ WI   + EL I    P  +YCD   + +S+  + V   D T  V 
Sbjct: 1357 EAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDKCGSNLSMCQSGVSFSDETYRVG 1416

Query: 1395 VDKH 1398
            +  H
Sbjct: 1417 LSLH 1420


>UniRef100_Q8LNV0 Putative copia-like polyprotein [Oryza sativa]
          Length = 894

 Score =  639 bits (1647), Expect = 0.0
 Identities = 323/627 (51%), Positives = 438/627 (69%), Gaps = 24/627 (3%)

Query: 823  LRVYVRKKFHKDGTNPIVFPAEVQSDSPSEGPTDNPSS---------SSSGNSSHSSNDL 873
            L+VY R+K     T  +      Q +SP +G     SS         S   ++   S+D 
Sbjct: 258  LQVYTRRK-----TRSLEAQTMGQHESPMDGMEQQQSSIVAEVGDKPSDQCDTIQISSDT 312

Query: 874  PDLSFP----DINLPIAVRKNIPDLNIPIAER----KRTRTCTKHPMSNYLSYDKLSHSH 925
                F     + NLPIA+RK +        +R     +     ++ ++NY+SY  L  ++
Sbjct: 313  EGEEFETGGEETNLPIAIRKGVRSNAGKPPQRYGFEAQGVNDDENNIANYVSYASLLSTY 372

Query: 926  KAYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVF 985
            KA+V+ ++++ +P   +EA  DP W  A+ EE+ AL KN TW +   P  KK V CKWV+
Sbjct: 373  KAFVTSLNSVEIPNDWREAKQDPRWHQAMLEELEALEKNKTWDLVPFPKGKKVVNCKWVY 432

Query: 986  TVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQY 1045
            TVK   D +VERYKARLVAKG++QT+GIDY ETFAPVAK++++R L+S A NF+W LHQ 
Sbjct: 433  TVKQNPDENVERYKARLVAKGYSQTYGIDYDETFAPVAKMSTVRTLISCAANFDWPLHQL 492

Query: 1046 DVKNAFLNGELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGH 1105
            DVKNAFL+G+L EEVYM +PPGF      GKV RLKKSLYGLKQSPRAWF+RF   + G 
Sbjct: 493  DVKNAFLHGDLQEEVYMEIPPGFATSQTEGKVLRLKKSLYGLKQSPRAWFDRFRRAMCGM 552

Query: 1106 GFTQSQADHTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKL 1165
            G+ Q   DHT+F++H+R G   IL+VYVDD+I+TGDD  EIS LK+ L  EF++KDLG+L
Sbjct: 553  GYKQCNGDHTVFYRHNR-GLKTILVVYVDDMIITGDDCLEISRLKQNLSKEFEVKDLGQL 611

Query: 1166 KYFLGMEFARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEIIDRE 1225
            KYFLG+E ARS  GI L+QRKY+LDLL++TGM GC+ A T ++ N KL + + D + ++E
Sbjct: 612  KYFLGIEIARSPRGIVLSQRKYVLDLLSDTGMLGCRPASTLIEQNHKLCAESGDPV-NKE 670

Query: 1226 RYQRLAGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRN 1285
            RYQRL GRLIYL HTRPDI +AVSV+S++MH P   H + V+RILRYLK +PGKG+ F+ 
Sbjct: 671  RYQRLVGRLIYLCHTRPDITYAVSVVSRYMHDPRSGHMDVVYRILRYLKASPGKGIWFKK 730

Query: 1286 RGHIQVEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAH 1345
             GH+ +E Y DADW   ++DRRSTSGYC F+GGNLV+WRSKK++VV+RS+AEAE+RS++ 
Sbjct: 731  NGHLDMEGYCDADWGSCLDDRRSTSGYCVFIGGNLVSWRSKKESVVSRSTAEAEYRSMSM 790

Query: 1346 GFCEVLWIKKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIKEKID 1405
               E+LW+K  + ELK++  T MK++CDNK+AI+IA+NPV HDRTKHVE+D+ FIKE++D
Sbjct: 791  SLSELLWLKNLLAELKLSTSTSMKLWCDNKSAINIANNPVQHDRTKHVEIDRFFIKERMD 850

Query: 1406 SGEICMSYIPTKSQVADVLTKSLPKRQ 1432
             G + + ++ +  QV D LTK+L  R+
Sbjct: 851  EGTLNLGFVNSGEQVVDSLTKALGARE 877



 Score =  172 bits (436), Expect = 7e-41
 Identities = 83/177 (46%), Positives = 117/177 (65%), Gaps = 1/177 (0%)

Query: 476 LKHLFPEFSKEISSSQFHCDACHLAKDHRVSFNSRGYSASKPFYLIHSDVWGPSKIKTLS 535
           +  +FP+   ++  S+  CDAC   K  R ++ SRG  +  PF L+HSDVW  S I ++S
Sbjct: 1   MSKVFPDEMSKVDKSKLMCDACEYGKHTRTTYISRGLQSILPFVLVHSDVW-TSPIASVS 59

Query: 536 RKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGILRSDNGTEYFNK 595
             K+FVTFID H+R+ W+YLM  KSEV + F++F+  ++NQ +T + ++RSDNG EY N 
Sbjct: 60  GAKYFVTFIDCHSRMTWIYLMRHKSEVLKCFKNFYAWVRNQLNTCVKVIRSDNGGEYVND 119

Query: 596 YLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPKYLWGNALL 652
              +FL   GI+HQ++C DTP QNG+AERKNRH+LEVT      +NV  +L G  LL
Sbjct: 120 EFRSFLSAEGIVHQTSCADTPPQNGVAERKNRHILEVTLLGKRDINVGVHLSGELLL 176


>UniRef100_Q6F356 Putative polyprotein [Oryza sativa]
          Length = 1256

 Score =  612 bits (1577), Expect = e-173
 Identities = 350/925 (37%), Positives = 531/925 (56%), Gaps = 39/925 (4%)

Query: 523  SDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIG 582
            +DVWGP+ +     KK++V+FID  +R  W+Y ++ KSEV Q+FQ+F  +++  F+  I 
Sbjct: 349  ADVWGPAPVAG-GGKKYYVSFIDAFSRFTWIYFLKYKSEVFQKFQEFQCLVERMFNRKII 407

Query: 583  ILRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERKNRHLLEVTRAIMFSMNV 642
             +++D G EY  + L+TF    GI H  +C  T QQNG AERK+RH++EV  +++   ++
Sbjct: 408  SMQTDWGGEY--QKLNTFFNKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASL 465

Query: 643  PKYLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIP 702
            P   W  A  +  +LINRMP++VL Y +P++ L    P  +      L+ FGC C+  + 
Sbjct: 466  PLKFWDEAYQSGVYLINRMPTKVLGYSSPLECLFKQTPDYQA-----LRTFGCACWPDLR 520

Query: 703  NIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVHFVEDQPFFRENSLQGES 762
                 K+  ++++C FLGY+   KG++C +  T + + S DV F E    F E +    +
Sbjct: 521  PYNSHKMHFRSKRCTFLGYSPLHKGFRCLDSSTGRIYISRDVVFDESVFPFAELNPNAGT 580

Query: 763  QSSNEEDNFWEILPVLDDIVTNDHLDAKITEPRNPNLELLEHMVFETGGEEGETLIKNPE 822
                E +     +    D+  NDH++   T P N        MV        E  ++N E
Sbjct: 581  NLRKEVNLLPADMLNPGDVQLNDHVNYYPTAPAN--------MV------AAENPVENTE 626

Query: 823  LRVYVRKKFHKD------GTNPIVFPAEVQSDSPSEGPTDNPSSSSSGNSSHSSNDLPDL 876
              +   +    D      GT     PA+  +   +  P  N SS+   + S S++     
Sbjct: 627  ENLASTRDDAADSGGSDTGTISNADPADDAAGDMTANPNLNDSSTHESSISASASPASQS 686

Query: 877  SF---PDINLPIAVRKNIPDLNIPIAERKRTRTCTKHPMSNYLSYDKLSHSHKAYVSRIS 933
            S    P+  LP   +++   L     E + +R  T   +   +  +K+          ++
Sbjct: 687  SVATAPEATLPNP-QQHQQALRSSTPEGEASRPVTH--LQKGIRKEKIYTDRTVKYGCLT 743

Query: 934  NLFVPRTIQEALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVFTVKCKADG 993
                PR + +AL D NWK A+  +  AL  N TW +      +  +  KWV+ +K K DG
Sbjct: 744  TTGEPRDLHDALHDTNWKHAMDAKFTALLHNKTWHLVPPQKGRNIIDYKWVYKIKRKQDG 803

Query: 994  SVERYKARLVAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLN 1053
            S++RYKARLVAKGF Q +GIDY++TF+PV K  +IRI+LS+AV+  WTL Q DV+NAFL+
Sbjct: 804  SLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWTLRQLDVQNAFLH 863

Query: 1054 GELHEEVYMRLPPGFEDKLGRGKVCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQAD 1113
            G L EEVYM+ PPG+EDK+    VC+L K+LYGLKQ+PRAW+ +    ++  GF  S+AD
Sbjct: 864  GILEEEVYMKQPPGYEDKVHPDYVCKLDKALYGLKQAPRAWYAKLSQKLQHLGFQGSKAD 923

Query: 1114 HTMFFKHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEF 1173
             ++FF +++ G I  ++VYVDDII+       +  L + L+ +F +KDLG L YFLG+E 
Sbjct: 924  TSLFF-YNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDLQKDFALKDLGDLHYFLGIEV 982

Query: 1174 ARSKEGIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEII---DRERYQRL 1230
             ++  GI L Q KY+ DLL   GMT CK   TP+  + KL ++ E +++   D   Y+ +
Sbjct: 983  NKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKL-TLHEGDLLGPNDASNYRSV 1041

Query: 1231 AGRLIYLSHTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQ 1290
             G L YL+ TRPDI F V+ + QF+HAP   H+ A+ RILRYLK     GL       + 
Sbjct: 1042 VGALQYLTLTRPDIYFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSKSML 1101

Query: 1291 VEAYTDADWAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEV 1350
            V  Y+DADWAGNI+DRRST G+  F+G NLV+W +KKQ  V RSS E+E++++A+   E+
Sbjct: 1102 VSGYSDADWAGNIDDRRSTGGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEI 1161

Query: 1351 LWIKKFMQELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEIC 1410
            +WI+  ++EL +  P   +++CDN  A  ++ NPV H RTKH+EVD HF++E++    + 
Sbjct: 1162 MWIQTLLEELSVPSPPMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFVRERMQRKLLE 1221

Query: 1411 MSYIPTKSQVADVLTKSLPKRQFDD 1435
            + +IPT  QVAD  TK+L  RQ ++
Sbjct: 1222 VEFIPTGDQVADGFTKALSARQLEN 1246



 Score = 49.7 bits (117), Expect = 7e-04
 Identities = 38/209 (18%), Positives = 87/209 (41%), Gaps = 29/209 (13%)

Query: 3   TIRLNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPDKV-------------GADYDTWD 49
           T +L+  NY  W   V   IRG     Y+TG  K+P                    D W 
Sbjct: 19  TEKLSKGNYLIWKVQVLAVIRGARLDSYLTGATKKPSATIIIKKNEKEVEVSNPAVDEWI 78

Query: 50  AENSMVMTWLVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQ 109
           A +  V+ +L+ +++ ++ +     ++A  LW  +  M+S    +++     + L   ++
Sbjct: 79  ANDQQVLGYLLTTMSRDVLSQVATCSSAASLWSTIEGMFSS-ATRARSINTKIALTNTKK 137

Query: 110 AEDSVTKYFGCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKF-LAGLNVEFDEV 168
            +  + +Y   ++ +  +L                  K VD   +  + +AGL+ +F+ +
Sbjct: 138 GDLGIAEYVSKMRVLADELATSG--------------KPVDEEDLISYIIAGLDEDFEPI 183

Query: 169 RGRILGRNPIPPIGEVFAEVRREESRRQV 197
              ++ ++    +GE ++++   E R ++
Sbjct: 184 ISSLVSKSEHVSLGEAYSQLLSFEQRMKM 212


>UniRef100_Q04358 Potato DNA for copia-like transposable element [Solanum tuberosum]
          Length = 675

 Score =  600 bits (1547), Expect = e-169
 Identities = 314/677 (46%), Positives = 437/677 (64%), Gaps = 19/677 (2%)

Query: 371  IKISEQITLQSVLHVPKFACNLLSVHKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREI 430
            + +S  + L   LHVPK +CNL+S  KL+   NC V+F    C FQ++ SGK IG+ARE 
Sbjct: 13   LNLSPSLVLHDTLHVPKLSCNLVSFRKLTRSLNCRVIFYSDLCEFQEKVSGKMIGSARES 72

Query: 431  NGLYYFDETPLGNTAMFGSSRTSPPLVSNKIMLWHKRLGHPSFSYLKHLFPEFSKEISSS 490
             GLY+ D     N+        +   V NK+MLWH  LGHPSF YL+HL P+  +  + S
Sbjct: 73   GGLYFLDNG--NNSLQLNPIFLNSTFVLNKVMLWHYGLGHPSFYYLRHLLPQLFRNKNPS 130

Query: 491  QFHCDACHLAKDH-RVSFNSRGYSASKPFYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTR 549
             F C+ C +AK H   SF S+ Y ASKPF +IHSDVWGPS+I T+  K+WFVTFIDDHTR
Sbjct: 131  LFQCEFCEMAKHHVDTSFPSQRYQASKPFTMIHSDVWGPSRISTMFGKRWFVTFIDDHTR 190

Query: 550  VCWVYLMEKKSEVEQRFQDFFNMIKNQFHTTIGILRSDNGTEYFNKYLSTFLVTNGIIHQ 609
            + WV+L++ KSEV+  F+ F  M++ QF+  I I RSDNG E+FN+ L +F    G++HQ
Sbjct: 191  LSWVFLLKGKSEVKNVFETFHVMVETQFNEKIKIFRSDNGREFFNEQLGSFFRKTGVVHQ 250

Query: 610  STCRDTPQQNGIAERKNRHLLEVTRAIMFSMNVPKYLWGNALLTACHLINRMPSRVLQYE 669
            S+C DTPQQNGIAERKNRHLLE TRA+MF+  VP++LWG ALLTA +LINRMPSR L+++
Sbjct: 251  SSCPDTPQQNGIAERKNRHLLEATRALMFTSKVPQHLWGEALLTATYLINRMPSRPLEFK 310

Query: 670  TPVQVLQNNFPTSRIITNIPLKVFGCLCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYK 729
            TP +V + +FP+SR+ T++PL+VFGC  +V++ N  RSKL+P+A+KC+F+GYA ++KGYK
Sbjct: 311  TPFKVFRESFPSSRLTTDLPLRVFGCTTFVHVHN--RSKLEPRAKKCIFVGYAPSQKGYK 368

Query: 730  CFNPVTKKFFESMDVHFVEDQPFFRENSLQGESQSSNEEDNFWEILPVLDDIVTNDHLDA 789
            C++P  +K   +MD+ F E Q +F  + LQGE      ED+F+ IL  LD       +  
Sbjct: 369  CYDPHARKIIVTMDLTFFESQLYFTTH-LQGEYHLG--EDSFFVILRKLDIKQMRSLILQ 425

Query: 790  KITEPRNPNLELLEHMVFETGGEEGETLIKNPELR---VYVRKKFHKDGTNPIVFPAEVQ 846
              T+ R+   E +         ++ + +IK  + +   V      +K+G        E +
Sbjct: 426  INTDVRDVG-EDINKCDPRDDKDQSDLMIKTQKFKPEPVAPSNDKNKNGNR------EQK 478

Query: 847  SDSPSEGPTDNPSSSSSGNSSHSSNDLP-DLSFPDINLPIAVRKNIPDLNIPIAERKRTR 905
            ++       +      + +S H    +P DL+     LP     N  DL++PIA+RK  R
Sbjct: 479  TEMQVYSRRNRTQEKRTEDSQHCQKSVPQDLTVIQGTLPTDSISNSLDLDLPIAKRKGVR 538

Query: 906  TCTKHPMSNYLSYDKLSHSHKAYVSRISNLFVPRTIQEALGDPNWKLAVKEEMNALNKNN 965
              +K+P+S ++SY KLS S+ A+ S++S++ +P  +Q+AL  P WK A+ EE+ AL KN 
Sbjct: 539  NTSKYPISMFVSYKKLSPSYSAFTSQLSSVEIPTNVQDALQVPEWKEAILEELRALEKNE 598

Query: 966  TWCITDLPYDKKAVGCKWVFTVKCKADGSVERYKARLVAKGFTQTHGIDYQETFAPVAKI 1025
            TW + DLP  KK VGCKWVFT K K+DGS+ERYKA LV K  T     DY ETFAPVAK+
Sbjct: 599  TWELVDLPEGKKPVGCKWVFTTKFKSDGSLERYKAHLVVKDHTDISMHDYLETFAPVAKL 658

Query: 1026 NSIRILLSLAVNFNWTL 1042
            NSIR+LL++AVN +W+L
Sbjct: 659  NSIRVLLTIAVNLDWSL 675


>UniRef100_Q6L3H0 Putative receptor kinase [Solanum demissum]
          Length = 1358

 Score =  580 bits (1496), Expect = e-164
 Identities = 277/490 (56%), Positives = 370/490 (74%), Gaps = 7/490 (1%)

Query: 943  EALGDPNWKLAVKEEMNALNKNNTWCITDLPYDKKAVGCKWVFTVKCKADGSVERYKARL 1002
            EAL    W+ A+ +EM+AL+K+ TW +  LP  K  VGC+WV+ VK   DG V+R KARL
Sbjct: 851  EALSHSGWRQAMVDEMSALHKSGTWELVSLPAGKSTVGCRWVYAVKIGPDGQVDRLKARL 910

Query: 1003 VAKGFTQTHGIDYQETFAPVAKINSIRILLSLAVNFNWTLHQYDVKNAFLNGELHEEVYM 1062
            VAKG+TQ  G+DY +TFAPVAKI S+R+ LS+A   +W LHQ D+KNAFL+G+L EEVYM
Sbjct: 911  VAKGYTQIFGLDYSDTFAPVAKIASVRLFLSMAAVRHWPLHQLDIKNAFLHGDLEEEVYM 970

Query: 1063 RLPPGFEDKLGRGK----VCRLKKSLYGLKQSPRAWFERFGSVVKGHGFTQSQADHTMFF 1118
              PPGF   + +G+    VCRL++SLYGLKQSPRAWF +F +V++  G T+S ADH++F+
Sbjct: 971  EQPPGF---VAQGESSSLVCRLRRSLYGLKQSPRAWFGKFSTVIQEFGMTRSGADHSVFY 1027

Query: 1119 KHSREGKIAILIVYVDDIIMTGDDIGEISDLKRRLEAEFDIKDLGKLKYFLGMEFARSKE 1178
            +HS   +   L+VYVDDI++TG+D   I+DLK+ L   F  KDLG+LKYFLG+E A+S+ 
Sbjct: 1028 RHSAPSRCIYLVVYVDDIVITGNDQDGITDLKQHLFKHFQTKDLGRLKYFLGIEVAQSRS 1087

Query: 1179 GIFLNQRKYILDLLTETGMTGCKAAETPMDPNVKLKSVAEDEIIDRERYQRLAGRLIYLS 1238
            GI ++QRKY LD+L ETGM GC+  +TPMDPNVKL     + + + ERY+RL G+L YL+
Sbjct: 1088 GIVISQRKYALDILEETGMMGCRPVDTPMDPNVKLLPGQGEPLSNPERYRRLVGKLNYLT 1147

Query: 1239 HTRPDIAFAVSVISQFMHAPGPAHFEAVFRILRYLKGTPGKGLMFRNRGHIQVEAYTDAD 1298
             TRPDI+F VSV+SQFM +P  +H+EAV RILRY+K  PGKGL+F ++GH  +  YTDAD
Sbjct: 1148 VTRPDISFPVSVVSQFMTSPCDSHWEAVVRILRYIKSAPGKGLLFEDQGHEHIIGYTDAD 1207

Query: 1299 WAGNINDRRSTSGYCTFVGGNLVTWRSKKQNVVARSSAEAEFRSVAHGFCEVLWIKKFMQ 1358
            WAG+ +DRRSTSGYC  VGGNLV+W+SKKQNVVARSSAE+E+R++A   CE++WIK+ + 
Sbjct: 1208 WAGSPSDRRSTSGYCVLVGGNLVSWKSKKQNVVARSSAESEYRAMATATCELVWIKQLLG 1267

Query: 1359 ELKIAGPTPMKVYCDNKAAISIAHNPVLHDRTKHVEVDKHFIKEKIDSGEICMSYIPTKS 1418
            ELK      M++ CDN+AA+ IA NPV H+RTKH+E+D HF++EKI SG+I   ++ +  
Sbjct: 1268 ELKFGKVDKMELVCDNQAALHIASNPVFHERTKHIEIDCHFVREKILSGDIVTKFVKSND 1327

Query: 1419 QVADVLTKSL 1428
            Q+AD+ TKSL
Sbjct: 1328 QLADIFTKSL 1337



 Score =  400 bits (1028), Expect = e-109
 Identities = 253/792 (31%), Positives = 407/792 (50%), Gaps = 72/792 (9%)

Query: 6   LNGANYFRWSQSVQLYIRGRGKIGYITGDKKQPDKVGADYDT-------WDAENSMVMTW 58
           L  +NY  W+ SV+L+ +G+G   ++T    + D      +        W+  ++ + + 
Sbjct: 16  LGSSNYLSWASSVELWCKGQGVQDHLTNKAYEVDVKAKTSEEDAKAKAQWEKVDAQLCSL 75

Query: 59  LVNSLTEEIGANYLCYATAKDLWENVSQMYSDLGNQSQIYELTLQLGEIRQAEDSVTKYF 118
           L  S+  ++   +  + T   +WE    +Y++  + S+ Y++  +L  +++ E  ++ Y 
Sbjct: 76  LWRSIDFKLMPLFRPFQTCYTVWEKARALYTN--DISRFYDVISRLTNLKKQESDMSTYL 133

Query: 119 GCLKRIWQDLDLFNEYEWKSPEDCKHYQKMVDVSRVFKFLAGLNVEFDEVRGRILGRNPI 178
           G ++ + ++ D          +  +H Q +  V      LAGL  + D VR +IL    +
Sbjct: 134 GQVQAVMEEFDTLMPVTTNVEKQQEHRQTLFLVLT----LAGLPPDHDSVRDQILASPTV 189

Query: 179 PPIGEVFAEVRREESRRQVMLGKKKAAVPPPVEGSALA---VPQVNHKSFRNPRGGD--- 232
           P I E+F+ + R  +         K    P V+ S LA     +  ++S  N RGG    
Sbjct: 190 PTIDELFSRLLRLAAPPS-----HKVVSSPTVDSSILASQTFEKRTYQSMENRRGGGRFG 244

Query: 233 KTHLVCDYCGRNRHTQETCFKLHGRPNN--------------SKAGK-------FGDRPM 271
           K    C +C +  HT++ C+ LHG P +              ++A K       +G +P 
Sbjct: 245 KPRSKCSHCHKPGHTRDICYILHGPPPSYDPIVLKEYNEFLRNRASKQTSPPVAYGAQPN 304

Query: 272 PTTSNAASSPFTKEQMDHLLKLLKFNSSPNTPIGTVAQ-----TGKDSWALSVQNHSNPW 326
             ++NA      + + D  L+  + N   +  + +VAQ      G     +S  +    W
Sbjct: 305 QPSNNAH---IAQTEYDEFLQY-RANKQTSPQVVSVAQPDVSVAGNSFACVSQSSTLGTW 360

Query: 327 IIDSGASEHMTNCSHLFSSYFPSSGSEKVKIADGSYSSIAGKGNIKISEQITLQSVLHVP 386
           ++DSGAS+H++    L S    S     + +A+G  +   G G  K    +TL SVL+VP
Sbjct: 361 VMDSGASDHISGNKSLLSDIVYSQSLPAITLANGIQTKPKGVGKAKPLSSVTLDSVLYVP 420

Query: 387 KFACNLLSVHKLSEDSNCSVLFCRSTCVFQDQNSGKTIGTAREINGLYYFDETPLGNTAM 446
               NL SV +L++  +CS+ F     + QD+++G+ IGT  E  GLYY   +   N+  
Sbjct: 421 GSPFNLASVSRLTKALHCSITFFDDFFLMQDRSTGQMIGTGHESQGLYYLTSS---NSLA 477

Query: 447 FGSSRTSPPLVSNKIMLWHKRLGHPSFSYLKHLFPEFSKEISSSQFHCDACHLAKDHRVS 506
             S   SP L+       HKRLGH S S L+ + P  S   S S   C++C L K  R +
Sbjct: 478 ACSITDSPDLI-------HKRLGHSSLSKLQKMVPSLS---SLSTLDCESCQLGKHTRAT 527

Query: 507 FNSRGYSASKP-FYLIHSDVWGPSKIKTLSRKKWFVTFIDDHTRVCWVYLMEKKSEVEQR 565
           F+      S+  F L+HSD+WGPS++ +    ++FV+FIDD+++  WV+LM+ +SE+   
Sbjct: 528 FSRSTEGRSESIFSLVHSDIWGPSRVSSTLGFRYFVSFIDDYSKCTWVFLMKDRSELFSI 587

Query: 566 FQDFFNMIKNQFHTTIGILRSDNGTEYFNKYLSTFLVTNGIIHQSTCRDTPQQNGIAERK 625
           F+ FF  I+NQF  +I   RSDN  EY +     F+   GIIHQ+TC  TPQQNG+AERK
Sbjct: 588 FKSFFAEIQNQFGVSIRTFRSDNALEYLSSQFREFMTHQGIIHQTTCPYTPQQNGVAERK 647

Query: 626 NRHLLEVTRAIMFSMNVPKYLWGNALLTACHLINRMPSRVLQYETPVQVLQNNFPTSRII 685
           NRHL+E  R ++   NVP   WG+A+LT+C+LINRMPS  +Q + P  +L   FP S + 
Sbjct: 648 NRHLIETARTLLLESNVPLRFWGDAVLTSCYLINRMPSSSIQNQVPHSIL---FPQSHLY 704

Query: 686 TNIPLKVFGCLCYVYIPNIFRSKLDPKAEKCVFLGYASNKKGYKCFNPVTKKFFESMDVH 745
             IP +VFG  C+V+     + KL P+A KCVFLGY+  +KGY+C++    ++  S DV 
Sbjct: 705 P-IPPRVFGSTCFVHNLAPGKDKLAPRALKCVFLGYSRVQKGYRCYSHDLHRYLMSADVT 763

Query: 746 FVEDQPFFRENS 757
           F E QP++  ++
Sbjct: 764 FFESQPYYTSSN 775


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.319    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,535,971,018
Number of Sequences: 2790947
Number of extensions: 112789842
Number of successful extensions: 282442
Number of sequences better than 10.0: 1934
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 406
Number of HSP's that attempted gapping in prelim test: 274653
Number of HSP's gapped (non-prelim): 3743
length of query: 1436
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1296
effective length of database: 457,317,253
effective search space: 592683159888
effective search space used: 592683159888
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)