BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135320.11 + phase: 0
(165 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8VY73 Hypothetical protein At3g22530 [Arabidopsis tha... 137 8e-32
UniRef100_Q9LJ93 Emb|CAB10262.1 [Arabidopsis thaliana] 137 8e-32
UniRef100_Q8LEN8 Hypothetical protein [Arabidopsis thaliana] 137 8e-32
UniRef100_O23338 Hypothetical protein AT4g14830 [Arabidopsis tha... 133 1e-30
UniRef100_Q6ZA54 Hypothetical protein P0496D04.35 [Oryza sativa] 112 3e-24
UniRef100_Q8H8A8 Hypothetical protein OJ1134F05.21 [Oryza sativa] 100 2e-20
UniRef100_Q7XE90 Putative DNA-binding protein [Oryza sativa] 37 0.19
UniRef100_UPI000030EF39 UPI000030EF39 UniRef100 entry 35 0.54
UniRef100_UPI000034366D UPI000034366D UniRef100 entry 35 0.71
UniRef100_Q40451 DNA-binding protein [Nicotiana tabacum] 35 0.93
UniRef100_Q43568 DNA-binding protein [Nicotiana tabacum] 35 0.93
UniRef100_P12811 Chloroplast heat shock 22 kDa protein [Chlamydo... 34 1.6
UniRef100_Q9YKC9 Structural polyprotein [Venezuelan equine encep... 33 2.1
UniRef100_O41516 Structural protein [Venezuelan equine encephali... 33 2.1
UniRef100_UPI00002A7CC8 UPI00002A7CC8 UniRef100 entry 33 2.7
UniRef100_Q9YKC7 Structural polyprotein [Venezuelan equine encep... 33 3.5
UniRef100_Q882Q2 Peptide ABC transporter, ATP-binding protein [P... 33 3.5
UniRef100_UPI000028FA29 UPI000028FA29 UniRef100 entry 32 4.6
UniRef100_Q9YKC8 Structural polyprotein [Venezuelan equine encep... 32 4.6
UniRef100_Q84Q72 Hypothetical protein OJ1364E02.11 [Oryza sativa] 32 4.6
>UniRef100_Q8VY73 Hypothetical protein At3g22530 [Arabidopsis thaliana]
Length = 198
Score = 137 bits (346), Expect = 8e-32
Identities = 73/126 (57%), Positives = 90/126 (70%), Gaps = 8/126 (6%)
Query: 38 LRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETDSSL---GHVETHTLHIHPGVTK 94
LRRLPH+F+R+L+LPLRS+ADV++EE CFRFVAET G + + + IHPG+TK
Sbjct: 61 LRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGITK 120
Query: 95 IVVRA--SHSLHFSLDDLHPDIWRFRLPESVVPELATAVFVDGELIVTVPKAFDDENTPE 152
IVVR S SL SLD+L D+WRFRLPES PEL T VDG+LIVTVPK ++E+
Sbjct: 121 IVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPKNAEEEDDD- 179
Query: 153 PIGGGG 158
GGGG
Sbjct: 180 --GGGG 183
>UniRef100_Q9LJ93 Emb|CAB10262.1 [Arabidopsis thaliana]
Length = 167
Score = 137 bits (346), Expect = 8e-32
Identities = 73/126 (57%), Positives = 90/126 (70%), Gaps = 8/126 (6%)
Query: 38 LRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETDSSL---GHVETHTLHIHPGVTK 94
LRRLPH+F+R+L+LPLRS+ADV++EE CFRFVAET G + + + IHPG+TK
Sbjct: 30 LRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGITK 89
Query: 95 IVVRA--SHSLHFSLDDLHPDIWRFRLPESVVPELATAVFVDGELIVTVPKAFDDENTPE 152
IVVR S SL SLD+L D+WRFRLPES PEL T VDG+LIVTVPK ++E+
Sbjct: 90 IVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPKNAEEEDDD- 148
Query: 153 PIGGGG 158
GGGG
Sbjct: 149 --GGGG 152
>UniRef100_Q8LEN8 Hypothetical protein [Arabidopsis thaliana]
Length = 198
Score = 137 bits (346), Expect = 8e-32
Identities = 73/126 (57%), Positives = 90/126 (70%), Gaps = 8/126 (6%)
Query: 38 LRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETDSSL---GHVETHTLHIHPGVTK 94
LRRLPH+F+R+L+LPLRS+ADV++EE CFRFVAET G + + + IHPG+TK
Sbjct: 61 LRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGITK 120
Query: 95 IVVRA--SHSLHFSLDDLHPDIWRFRLPESVVPELATAVFVDGELIVTVPKAFDDENTPE 152
IVVR S SL SLD+L D+WRFRLPES PEL T VDG+LIVTVPK ++E+
Sbjct: 121 IVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVASVDGDLIVTVPKNAEEEDDD- 179
Query: 153 PIGGGG 158
GGGG
Sbjct: 180 --GGGG 183
>UniRef100_O23338 Hypothetical protein AT4g14830 [Arabidopsis thaliana]
Length = 152
Score = 133 bits (335), Expect = 1e-30
Identities = 73/115 (63%), Positives = 85/115 (73%), Gaps = 4/115 (3%)
Query: 37 KLRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETD-SSLGHVETHTLHIHPGVTKI 95
KLRRLPH+FSR+L+LPL+SDADV++EE CFRFVAETD G V + + IHPGVTKI
Sbjct: 29 KLRRLPHIFSRVLELPLKSDADVAVEESHDCFRFVAETDGGGGGGVRAYMVEIHPGVTKI 88
Query: 96 VVR--ASHSLHFSLDDLHPDIWRFRLPESVVPELATA-VFVDGELIVTVPKAFDD 147
+VR S SL SLD+L D+WRFRLPES PEL T DGELIVTVPK D+
Sbjct: 89 LVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVDCDGDGELIVTVPKIEDN 143
>UniRef100_Q6ZA54 Hypothetical protein P0496D04.35 [Oryza sativa]
Length = 171
Score = 112 bits (281), Expect = 3e-24
Identities = 63/133 (47%), Positives = 79/133 (59%), Gaps = 14/133 (10%)
Query: 37 KLRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETD--SSLGHVETHTLHIHPGVTK 94
KLRRLPH+F+++L+LP +DADVS+EE+ RFVA D + G H + IHPGVTK
Sbjct: 32 KLRRLPHIFAKVLELPFAADADVSVEEDAAALRFVAAADGFTPSGGASAHAVEIHPGVTK 91
Query: 95 IVVRASHSLHFSLDD-----LHPDIWRFRLPESVVPELATAVFVDGELIVTVPKAFDDEN 149
+VVR L LD D WRFRLP +P +ATA + DGEL+VTVPK
Sbjct: 92 VVVR---DLSAGLDGDDGAVFELDRWRFRLPPCTLPAMATATYADGELVVTVPKG----A 144
Query: 150 TPEPIGGGGATLV 162
P+ G G A V
Sbjct: 145 APDDDGDGAAAAV 157
>UniRef100_Q8H8A8 Hypothetical protein OJ1134F05.21 [Oryza sativa]
Length = 176
Score = 99.8 bits (247), Expect = 2e-20
Identities = 53/118 (44%), Positives = 74/118 (61%), Gaps = 4/118 (3%)
Query: 30 GFSNNNNKLRRLPHVFSRILQLPLRSDADVSIEEEPTCFRFVAETDSSL-GHVETHTLHI 88
G LRRLPHV+S++L+LP +D DV++ E P F FV ++L G V T+ I
Sbjct: 13 GSCGGKKDLRRLPHVYSKVLELPFPADTDVAVFEGPDAFHFVVSAAAALAGEVRVRTVRI 72
Query: 89 HPGVTKIVVRA-SHSLH--FSLDDLHPDIWRFRLPESVVPELATAVFVDGELIVTVPK 143
HPGV ++VV+A +H DD+ D WR RLPE+ P +A A +V+G+L+VTVPK
Sbjct: 73 HPGVVRVVVQAGGGGVHDDGDDDDMELDKWRSRLPEASCPAMAVAGYVNGQLVVTVPK 130
>UniRef100_Q7XE90 Putative DNA-binding protein [Oryza sativa]
Length = 1066
Score = 37.0 bits (84), Expect = 0.19
Identities = 29/97 (29%), Positives = 43/97 (43%), Gaps = 3/97 (3%)
Query: 37 KLRRLPHVFSRILQLPLRSDADVS--IEEEPTCFRFVAETDSSLGHVETHTLHIHP-GVT 93
KL+RLP VFSR+L+LP D +V F V+ H + + +T
Sbjct: 16 KLQRLPPVFSRVLELPFPRDTNVRKLFTTNADLFFVPHGVGGEPDVVKVHIVRLERWDMT 75
Query: 94 KIVVRASHSLHFSLDDLHPDIWRFRLPESVVPELATA 130
++VV +DL D WRF L E+ + + A
Sbjct: 76 RVVVHIGPGEPDLRNDLVYDKWRFPLAETSILSMVMA 112
>UniRef100_UPI000030EF39 UPI000030EF39 UniRef100 entry
Length = 144
Score = 35.4 bits (80), Expect = 0.54
Identities = 34/124 (27%), Positives = 56/124 (44%), Gaps = 16/124 (12%)
Query: 36 NKLRRLPHVFSRI------LQLPLRSDADV---SIEEEPTCFRFVAETDSSLGHVETHTL 86
N R L F RI + +P+RS + +++ E T +F+ D + T+
Sbjct: 7 NPNRSLISDFDRIFDNMFNIDIPIRSKGNSYYPAVDIEETEKKFILSADMPGLKKKEVTI 66
Query: 87 HIHPGVTKIVVRASHSLHFSLD--DLHPDIW-----RFRLPESVVPELATAVFVDGELIV 139
IH G+ I + S D +H + FRLP++V + A F +GEL++
Sbjct: 67 DIHDGIITIKGERMNEDKSSFDGYSMHERQFGSFNRSFRLPDNVNEDKIAAKFDNGELLI 126
Query: 140 TVPK 143
T+PK
Sbjct: 127 TLPK 130
>UniRef100_UPI000034366D UPI000034366D UniRef100 entry
Length = 212
Score = 35.0 bits (79), Expect = 0.71
Identities = 28/109 (25%), Positives = 48/109 (43%), Gaps = 11/109 (10%)
Query: 49 LQLPLRSDADVSIEEEPTCFRFVAETDSSLGHVETHTLHIHPGVTKIVVRASHSLHFSLD 108
+ L + +D ++EE R+ LG T+ I+PG K+ L +
Sbjct: 43 MNLQQNAGSDETVEERKVDVRY-------LGQGHELTIPINPG--KLSTNDVEELREKFE 93
Query: 109 DLHPDIWRFRLPESVVPELATAVFVDGELIVTVPKAFD--DENTPEPIG 155
+L+ I+ LPE V ++ +V V ++ K + D+ PEPIG
Sbjct: 94 ELYHQIYGLNLPEMEVEAISWSVTVKSPEATSIQKNSEGMDQTGPEPIG 142
>UniRef100_Q40451 DNA-binding protein [Nicotiana tabacum]
Length = 546
Score = 34.7 bits (78), Expect = 0.93
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 116 RFRLPESVVPELATAVFVDGELIVTVPKAFDDENTPEPIGGGGAT 160
R R P S P AT D V + AFD EN P +GGGG T
Sbjct: 392 RGRPPRSSGPPAATVGVTD----VPIAAAFDTENLPNAVGGGGVT 432
>UniRef100_Q43568 DNA-binding protein [Nicotiana tabacum]
Length = 380
Score = 34.7 bits (78), Expect = 0.93
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 116 RFRLPESVVPELATAVFVDGELIVTVPKAFDDENTPEPIGGGGAT 160
R R P S P AT D V + AFD EN P +GGGG T
Sbjct: 226 RGRPPRSSGPPAATVGVTD----VPIAAAFDTENLPNAVGGGGVT 266
>UniRef100_P12811 Chloroplast heat shock 22 kDa protein [Chlamydomonas reinhardtii]
Length = 157
Score = 33.9 bits (76), Expect = 1.6
Identities = 31/108 (28%), Positives = 46/108 (41%), Gaps = 16/108 (14%)
Query: 57 ADVSIEEEPTCFRFVAETDSSLGHVETHTLHIHPGVTKIVVRASHSLHFSLDDLHPDIWR 116
A + I E PT F A+ +G + + + GV ++V L + + +WR
Sbjct: 47 APMDIIESPTAFELHADAPG-MGPDDVK-VELQEGV--LMVTGERKLSHTTKEAGGKVWR 102
Query: 117 -----------FRLPESVVPELATAVFVDGELIVTVPKAFDDENTPEP 153
F LPE+ P+ TA G L+VTVPK + PEP
Sbjct: 103 SERTAYSFSRAFSLPENANPDGITAAMDKGVLVVTVPKR-EPPAKPEP 149
>UniRef100_Q9YKC9 Structural polyprotein [Venezuelan equine encephalitis virus]
Length = 1254
Score = 33.5 bits (75), Expect = 2.1
Identities = 22/79 (27%), Positives = 38/79 (47%), Gaps = 9/79 (11%)
Query: 44 VFSRILQLPLRSDADVSIEE--EPTCFRFVAETDSSLG-------HVETHTLHIHPGVTK 94
+F+R+ + P S A+ S+ E T F +A S HV + T + + +
Sbjct: 1098 LFTRVSETPTLSSAECSLNECTYSTDFGGIATVKYSASKSGKCAVHVPSGTATLKESLVE 1157
Query: 95 IVVRASHSLHFSLDDLHPD 113
+V + S +LHFS +HP+
Sbjct: 1158 VVEQGSMTLHFSTASIHPE 1176
>UniRef100_O41516 Structural protein [Venezuelan equine encephalitis virus]
Length = 1254
Score = 33.5 bits (75), Expect = 2.1
Identities = 22/79 (27%), Positives = 38/79 (47%), Gaps = 9/79 (11%)
Query: 44 VFSRILQLPLRSDADVSIEE--EPTCFRFVAETDSSLG-------HVETHTLHIHPGVTK 94
+F+R+ + P S A+ S+ E T F +A S HV + T + + +
Sbjct: 1098 LFTRVSETPTLSSAECSLNECTYSTDFGGIATVKYSASKSGKCAVHVPSGTATLKESLVE 1157
Query: 95 IVVRASHSLHFSLDDLHPD 113
+V + S +LHFS +HP+
Sbjct: 1158 VVEQGSMTLHFSTASIHPE 1176
>UniRef100_UPI00002A7CC8 UPI00002A7CC8 UniRef100 entry
Length = 141
Score = 33.1 bits (74), Expect = 2.7
Identities = 13/28 (46%), Positives = 21/28 (74%)
Query: 117 FRLPESVVPELATAVFVDGELIVTVPKA 144
F LP+SV+PE +A + +G L++ +PKA
Sbjct: 101 FTLPDSVLPEKISAKYKNGTLLINIPKA 128
>UniRef100_Q9YKC7 Structural polyprotein [Venezuelan equine encephalitis virus]
Length = 1254
Score = 32.7 bits (73), Expect = 3.5
Identities = 22/79 (27%), Positives = 38/79 (47%), Gaps = 9/79 (11%)
Query: 44 VFSRILQLPLRSDADVSIEEEPTCFRF-----VAETDSSLG----HVETHTLHIHPGVTK 94
+F+R+ + P SDA S+ E F V + S G H+ + T + +
Sbjct: 1098 LFTRVSETPTLSDAGCSLNECVYSSDFGGIATVKYSASKAGKCAVHIPSGTATLKESIVD 1157
Query: 95 IVVRASHSLHFSLDDLHPD 113
+V + S +LHFS ++HP+
Sbjct: 1158 VVEQGSLTLHFSTANIHPE 1176
>UniRef100_Q882Q2 Peptide ABC transporter, ATP-binding protein [Pseudomonas syringae]
Length = 333
Score = 32.7 bits (73), Expect = 3.5
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 19 LSQAETLLSMSGFSNNNNKLRRLPHVFSR------ILQLPLRSDADVSIEEEPT 66
L +A +L G SN + +LR+ PH S I+ + L + DV I +EPT
Sbjct: 128 LQRAAQMLEKVGISNASERLRQYPHQLSGGLRQRVIIAMALMCEPDVIIADEPT 181
>UniRef100_UPI000028FA29 UPI000028FA29 UniRef100 entry
Length = 208
Score = 32.3 bits (72), Expect = 4.6
Identities = 23/106 (21%), Positives = 50/106 (46%), Gaps = 6/106 (5%)
Query: 10 SIAYNMMNPLSQAETLLSMSGFSNNNNKLRRLPHVFSR-----ILQLPLRSDADVSIEEE 64
S YN++N + + LL+ + N K+ ++ + I +L +SDA++
Sbjct: 75 SFLYNVINENNLSPYLLAYKKYDKVNKKIILDKDLYDQTGKKFIGKLAKKSDAEILESSY 134
Query: 65 PTCFRFVAETDSSLGHVETHTLHIHPGVTK-IVVRASHSLHFSLDD 109
+ +++ LGH++ + I P ++K I++ S++ L D
Sbjct: 135 QKLLLLITFSETQLGHIKIYVKTISPQMSKDIIIMVKDSINKELKD 180
>UniRef100_Q9YKC8 Structural polyprotein [Venezuelan equine encephalitis virus]
Length = 1254
Score = 32.3 bits (72), Expect = 4.6
Identities = 22/79 (27%), Positives = 39/79 (48%), Gaps = 9/79 (11%)
Query: 44 VFSRILQLPLRSDADVSIEEEPTCFRF-----VAETDSSLG----HVETHTLHIHPGVTK 94
+F+R+ + P S+A+ S+ E F V T S G H+ + T + +
Sbjct: 1098 LFTRVSETPTLSNAECSLNECVYSSDFGGIATVKYTASKSGKCAVHIPSGTATLKESLVD 1157
Query: 95 IVVRASHSLHFSLDDLHPD 113
+V + S +LHFS ++HP+
Sbjct: 1158 VVEQGSLTLHFSTANIHPE 1176
>UniRef100_Q84Q72 Hypothetical protein OJ1364E02.11 [Oryza sativa]
Length = 161
Score = 32.3 bits (72), Expect = 4.6
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 116 RFRLPESVVPELATAVFVDGELIVTVPK 143
RFRLPE+ PE A +G L VTVPK
Sbjct: 119 RFRLPENTKPEQIKASMENGVLTVTVPK 146
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.321 0.136 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,483,729
Number of Sequences: 2790947
Number of extensions: 11089492
Number of successful extensions: 24716
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 24684
Number of HSP's gapped (non-prelim): 39
length of query: 165
length of database: 848,049,833
effective HSP length: 117
effective length of query: 48
effective length of database: 521,509,034
effective search space: 25032433632
effective search space used: 25032433632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 70 (31.6 bits)
Medicago: description of AC135320.11