
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135319.9 + phase: 0 /pseudo
(734 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9MA85 T12H1.31 protein [Arabidopsis thaliana] 56 3e-06
UniRef100_Q75HV2 Hypothetical protein OSJNBb0092G21.13 [Oryza sa... 51 1e-04
>UniRef100_Q9MA85 T12H1.31 protein [Arabidopsis thaliana]
Length = 770
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/37 (72%), Positives = 31/37 (82%), Gaps = 1/37 (2%)
Query: 699 AEADLLYSLITKAKFENNRYQKPKKK-TKFSTQHVDW 734
AEA+ LY+LI KAKFENNRYQKPKKK + S +HVDW
Sbjct: 733 AEAEFLYALIVKAKFENNRYQKPKKKQPESSGKHVDW 769
>UniRef100_Q75HV2 Hypothetical protein OSJNBb0092G21.13 [Oryza sativa]
Length = 270
Score = 51.2 bits (121), Expect = 1e-04
Identities = 22/36 (61%), Positives = 31/36 (86%)
Query: 699 AEADLLYSLITKAKFENNRYQKPKKKTKFSTQHVDW 734
+EA +L SL++KA FENNRY+KPK++TK S+ +VDW
Sbjct: 234 SEAAVLDSLLSKAMFENNRYKKPKRETKSSSDYVDW 269
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.365 0.163 0.692
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,098,168,393
Number of Sequences: 2790947
Number of extensions: 41732008
Number of successful extensions: 186425
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 186420
Number of HSP's gapped (non-prelim): 4
length of query: 734
length of database: 848,049,833
effective HSP length: 135
effective length of query: 599
effective length of database: 471,271,988
effective search space: 282291920812
effective search space used: 282291920812
T: 11
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.6 bits)
S2: 79 (35.0 bits)
Medicago: description of AC135319.9