BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135234.2 - phase: 0 /pseudo
(1380 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q949L2 Putative polyprotein [Cicer arietinum] 206 4e-51
UniRef100_Q84KB0 Pol protein [Cucumis melo] 157 2e-36
UniRef100_Q60CY4 Putative polyprotein [Solanum tuberosum] 137 2e-30
UniRef100_Q6F2D6 Putative polyprotein [Solanum demissum] 137 2e-30
UniRef100_Q6L428 Putative integrase [Solanum demissum] 135 9e-30
UniRef100_Q6L3S2 Putative retrotransposon protein [Solanum demis... 134 1e-29
UniRef100_Q6UUR9 Putative gag-pol protein [Oryza sativa] 133 4e-29
UniRef100_Q6L3Y7 Putative gag-pol polyprotein [Solanum demissum] 132 6e-29
UniRef100_Q6L3Y6 Putative gag-pol polyprotein [Solanum demissum] 132 6e-29
UniRef100_Q9SK57 Putative retroelement pol polyprotein [Arabidop... 130 2e-28
UniRef100_Q9SUK5 RETROTRANSPOSON like protein [Arabidopsis thali... 127 2e-27
UniRef100_O81508 T7M24.4 protein [Arabidopsis thaliana] 123 4e-26
UniRef100_Q9XE68 Polyprotein [Sorghum bicolor] 122 8e-26
UniRef100_Q7XP03 OSJNBb0013J13.17 protein [Oryza sativa] 120 2e-25
UniRef100_Q7XBX8 Putative gypsy-type retrotransposon polyprotein... 120 4e-25
UniRef100_Q7X726 OSJNBa0089N06.1 protein [Oryza sativa] 119 5e-25
UniRef100_Q6AT86 Putative polyprotein [Oryza sativa] 119 5e-25
UniRef100_Q7XQR0 OSJNBa0091D06.9 protein [Oryza sativa] 119 5e-25
UniRef100_Q7XPS2 OSJNBa0065O17.9 protein [Oryza sativa] 119 5e-25
UniRef100_Q6L494 Putative polyprotein [Oryza sativa] 119 5e-25
>UniRef100_Q949L2 Putative polyprotein [Cicer arietinum]
Length = 141
Score = 206 bits (524), Expect = 4e-51
Identities = 98/138 (71%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
Query: 1233 RGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHV 1292
+GDHVFLRVTP TGVGRALKSKKLTPKFIGPYQIS R+G VAYR+ LPP LSN+HDVFHV
Sbjct: 2 QGDHVFLRVTPTTGVGRALKSKKLTPKFIGPYQISARIGPVAYRIALPPILSNIHDVFHV 61
Query: 1293 SQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGE 1352
SQLRKY+ DPSHVI +Q++DNL+ E P+RIDD K+K LR K++ LV+V+W TG+
Sbjct: 62 SQLRKYLADPSHVIEPDTIQLKDNLSFEVPPVRIDDMKIKRLRTKDVSLVKVIWNPITGD 121
Query: 1353 SLTWELESKMRESYPELF 1370
+ TWELESKMRE +PELF
Sbjct: 122 A-TWELESKMREQHPELF 138
>UniRef100_Q84KB0 Pol protein [Cucumis melo]
Length = 923
Score = 157 bits (397), Expect = 2e-36
Identities = 75/137 (54%), Positives = 97/137 (70%)
Query: 1234 GDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVS 1293
GD VFL+V PM GV R + KL+P+F+GP++I ER+G VAYR+ LPP LS +HDVFHVS
Sbjct: 785 GDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSTVHDVFHVS 844
Query: 1294 QLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGES 1353
LRKYVPDPSHV+ +++ +NL+ P+ + R VK+LR K+IPLV+V+W E
Sbjct: 845 MLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQIPLVKVLWRNHRVEE 904
Query: 1354 LTWELESKMRESYPELF 1370
TWE E MR YPELF
Sbjct: 905 ATWEREDDMRSRYPELF 921
>UniRef100_Q60CY4 Putative polyprotein [Solanum tuberosum]
Length = 394
Score = 137 bits (346), Expect = 2e-30
Identities = 70/139 (50%), Positives = 91/139 (65%)
Query: 1232 SRGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFH 1291
S GD VFLRV+PM GV R + KL+P++IGP++I VG VAY + LPP S +H VFH
Sbjct: 250 SVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEILRTVGEVAYELALPPVFSAIHPVFH 309
Query: 1292 VSQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATG 1351
VS LR+YVPD SHV+ V++ D LT P+ I R V+ LR + IP+V+V W +
Sbjct: 310 VSMLRRYVPDESHVLQYDAVELDDRLTFVEEPVAILARDVRRLRSRAIPVVKVRWRHCSV 369
Query: 1352 ESLTWELESKMRESYPELF 1370
E TWE E +MRE +P LF
Sbjct: 370 EEATWETEQEMREQFPGLF 388
>UniRef100_Q6F2D6 Putative polyprotein [Solanum demissum]
Length = 1769
Score = 137 bits (345), Expect = 2e-30
Identities = 70/139 (50%), Positives = 90/139 (64%)
Query: 1232 SRGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFH 1291
S GD VFLRV+PM GV R + KL+P++IGP++I VG VAY + LPP S +H VFH
Sbjct: 1625 SVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEILRTVGEVAYELALPPVFSAIHPVFH 1684
Query: 1292 VSQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATG 1351
VS LR+YVPD SHV+ V++ D LT P+ I R V+ LR + IP+V+V W
Sbjct: 1685 VSMLRRYVPDESHVLQYDAVELDDRLTFVEEPVAILARDVRRLRSRAIPVVKVRWRHRPV 1744
Query: 1352 ESLTWELESKMRESYPELF 1370
E TWE E +MRE +P LF
Sbjct: 1745 EEATWETEQEMREQFPSLF 1763
>UniRef100_Q6L428 Putative integrase [Solanum demissum]
Length = 1609
Score = 135 bits (340), Expect = 9e-30
Identities = 69/139 (49%), Positives = 88/139 (62%)
Query: 1232 SRGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFH 1291
S GD VF RV+PM GV R + KL+P++IGP++I VG VAY + LPP S +H VFH
Sbjct: 1324 SVGDRVFFRVSPMKGVMRFGRRDKLSPRYIGPFEILRTVGEVAYELALPPAFSAIHPVFH 1383
Query: 1292 VSQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATG 1351
V LR+YVPD SHV+ V++ D LT P+ I R VK LR + IP+V+V W
Sbjct: 1384 VPMLRRYVPDESHVLQYDAVELDDRLTFVEEPIAILARDVKRLRSRAIPVVKVHWRHRPV 1443
Query: 1352 ESLTWELESKMRESYPELF 1370
E TWE E +MRE +P LF
Sbjct: 1444 EEATWETEQEMREQFPVLF 1462
>UniRef100_Q6L3S2 Putative retrotransposon protein [Solanum demissum]
Length = 1602
Score = 134 bits (338), Expect = 1e-29
Identities = 64/139 (46%), Positives = 96/139 (69%)
Query: 1235 DHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVSQ 1294
D V+L+V+PM GV R K KL+P++IGPY+I +RVG+VAY + LP L+ +H VFH+S
Sbjct: 1460 DWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAAVHPVFHISM 1519
Query: 1295 LRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGESL 1354
L+K + DPS ++ V+++DNL+ E +P++I DR+V+ LR K++ V+V+W E
Sbjct: 1520 LKKCIGDPSLILPTESVKIKDNLSYEEVPVQILDRQVRRLRTKDVASVKVLWRNQFVEEA 1579
Query: 1355 TWELESKMRESYPELFP*G 1373
TWE E M++ YP LF G
Sbjct: 1580 TWEAEEDMKKRYPHLFESG 1598
>UniRef100_Q6UUR9 Putative gag-pol protein [Oryza sativa]
Length = 552
Score = 133 bits (334), Expect = 4e-29
Identities = 63/137 (45%), Positives = 91/137 (65%)
Query: 1234 GDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVS 1293
GD V LRV+P G+ R + KL+P++IGP+ I+ RVG++AYR+ LP ++ +HDVFHVS
Sbjct: 409 GDQVLLRVSPTKGIVRFGTTGKLSPRYIGPFVITARVGSLAYRLQLPESMNGVHDVFHVS 468
Query: 1294 QLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGES 1353
LRKY+ DP H I + V +LT+E P+RI D + +R + I V+V+W +
Sbjct: 469 MLRKYLRDPEHKIDLEPIMVEQDLTIECRPVRIFDWSERVMRRRTIKYVKVLWTNQSERE 528
Query: 1354 LTWELESKMRESYPELF 1370
TWELE +M++ YPELF
Sbjct: 529 ATWELEEEMKKKYPELF 545
>UniRef100_Q6L3Y7 Putative gag-pol polyprotein [Solanum demissum]
Length = 1351
Score = 132 bits (333), Expect = 6e-29
Identities = 62/139 (44%), Positives = 95/139 (67%)
Query: 1235 DHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVSQ 1294
D V+L+V+PM GV R K KL+P++IGPY+I++R+G VAY + LP L+ +H VFH+S
Sbjct: 1209 DWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQELAAVHPVFHISM 1268
Query: 1295 LRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGESL 1354
L+K + DPS ++ +++ DNL+ E +P++I DR+V+ LR K++ V+V+W E
Sbjct: 1269 LKKCIGDPSLILPTESIKINDNLSYEEVPVQILDRQVRRLRTKDVASVKVLWRDQFVEEA 1328
Query: 1355 TWELESKMRESYPELFP*G 1373
TWE E M++ YP LF G
Sbjct: 1329 TWEAEEDMKKKYPYLFESG 1347
>UniRef100_Q6L3Y6 Putative gag-pol polyprotein [Solanum demissum]
Length = 1351
Score = 132 bits (333), Expect = 6e-29
Identities = 62/139 (44%), Positives = 95/139 (67%)
Query: 1235 DHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVSQ 1294
D V+L+V+PM GV R K KL+P++IGPY+I++R+G VAY + LP L+ +H VFH+S
Sbjct: 1209 DWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQELAAVHPVFHISM 1268
Query: 1295 LRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGESL 1354
L+K + DPS ++ +++ DNL+ E +P++I DR+V+ LR K++ V+V+W E
Sbjct: 1269 LKKCIGDPSLILPTESIKINDNLSYEEVPVQILDRQVRRLRTKDVASVKVLWRDQFVEEA 1328
Query: 1355 TWELESKMRESYPELFP*G 1373
TWE E M++ YP LF G
Sbjct: 1329 TWEAEEDMKKKYPYLFESG 1347
>UniRef100_Q9SK57 Putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1611
Score = 130 bits (328), Expect = 2e-28
Identities = 62/137 (45%), Positives = 88/137 (63%)
Query: 1234 GDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVS 1293
GD V+L+ G GR KKL+P+++GPY++ ERVG VAY++ LPP L+ H+VFHVS
Sbjct: 1446 GDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYKLDLPPKLNAFHNVFHVS 1505
Query: 1294 QLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGES 1353
QLRK + D + +++N+TVE P+RI DR K RGK L++V+W E
Sbjct: 1506 QLRKCLSDQEESVEDIPPGLKENMTVEAWPVRIMDRMTKGTRGKARDLLKVLWNCRGREE 1565
Query: 1354 LTWELESKMRESYPELF 1370
TWE E+KM+ ++PE F
Sbjct: 1566 YTWETENKMKANFPEWF 1582
>UniRef100_Q9SUK5 RETROTRANSPOSON like protein [Arabidopsis thaliana]
Length = 687
Score = 127 bits (319), Expect = 2e-27
Identities = 59/137 (43%), Positives = 87/137 (63%)
Query: 1234 GDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVS 1293
GD V+L+ G GR KKL P+++GPY++ ERVG VAY++ LPP L H+VFHVS
Sbjct: 530 GDLVYLKAMTYKGAGRFTSRKKLRPRYVGPYKVIERVGAVAYKLDLPPKLDAFHNVFHVS 589
Query: 1294 QLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGES 1353
QLRK + + + +++N+TVE P+RI D+ K RGK + L++++W E
Sbjct: 590 QLRKCLSEQEESMEDVPPGLKENMTVEAWPVRIMDQMKKGTRGKSMDLLKILWNCGGREE 649
Query: 1354 LTWELESKMRESYPELF 1370
TWE E+KM+ ++PE F
Sbjct: 650 YTWETETKMKANFPEWF 666
>UniRef100_O81508 T7M24.4 protein [Arabidopsis thaliana]
Length = 973
Score = 123 bits (308), Expect = 4e-26
Identities = 58/136 (42%), Positives = 86/136 (62%)
Query: 1235 DHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVSQ 1294
D V+L+ G GR KKL+P+++GPY++ ERVG VAY++ LPP L+ H+VFHVSQ
Sbjct: 809 DLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYKLDLPPKLNAFHNVFHVSQ 868
Query: 1295 LRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGESL 1354
LRK + + + +++N+TVE P++I DR K RGK L++V+W E
Sbjct: 869 LRKCLSNQEESVEDVPPGLKENMTVEAWPVQIMDRMTKGTRGKSRDLLKVLWNCGGREQY 928
Query: 1355 TWELESKMRESYPELF 1370
TWE E+KM+ ++ E F
Sbjct: 929 TWETENKMKANFSEWF 944
>UniRef100_Q9XE68 Polyprotein [Sorghum bicolor]
Length = 924
Score = 122 bits (306), Expect = 8e-26
Identities = 58/137 (42%), Positives = 84/137 (60%)
Query: 1234 GDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVS 1293
GDHV+L+V+P+ G R KL P+F+GPY+IS+R+G +AYR+ LP +S +H VFHVS
Sbjct: 782 GDHVYLKVSPLRGTFRFHVKGKLAPRFVGPYRISKRIGKLAYRLELPEEMSGVHPVFHVS 841
Query: 1294 QLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGES 1353
QLRK + P + + +++ L P+RI DR K R P+ +V+W T
Sbjct: 842 QLRKCLKLPEEEVPIETLDLQETLEYREYPVRILDRATKETRSSTFPMCKVLWSNHTERE 901
Query: 1354 LTWELESKMRESYPELF 1370
TWE ES+++ YP LF
Sbjct: 902 ATWEKESELQLRYPYLF 918
>UniRef100_Q7XP03 OSJNBb0013J13.17 protein [Oryza sativa]
Length = 864
Score = 120 bits (302), Expect = 2e-25
Identities = 57/139 (41%), Positives = 88/139 (63%)
Query: 1233 RGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHV 1292
+GDHV+LRV+P+ G+ R S KL P++IGPY I+ R G VAY++ LP L+++H+VFHV
Sbjct: 726 KGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARRGEVAYQLELPEGLADVHNVFHV 785
Query: 1293 SQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGE 1352
SQL+K + P + G++++ NLT + P+++ + R K I +V W + +
Sbjct: 786 SQLKKCLRVPEEQVPLGNIELEKNLTYKERPIKVLEEAEHQTRRKTIKFYKVQWSNHSED 845
Query: 1353 SLTWELESKMRESYPELFP 1371
TWE E +R +PELFP
Sbjct: 846 EATWEREDLLRAEFPELFP 864
>UniRef100_Q7XBX8 Putative gypsy-type retrotransposon polyprotein [Oryza sativa]
Length = 762
Score = 120 bits (300), Expect = 4e-25
Identities = 56/139 (40%), Positives = 87/139 (62%)
Query: 1233 RGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHV 1292
+GDHV+LRV+P+ G+ R S KL P++IGPY I+ R G VAY + LP L+++H+VFHV
Sbjct: 624 KGDHVYLRVSPLRGIRRFGMSGKLAPRYIGPYLITARRGEVAYHLELPEGLADVHNVFHV 683
Query: 1293 SQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGE 1352
SQL+K + P + G++++ NLT + P+++ + + R K I +V W + +
Sbjct: 684 SQLKKCLRVPEEQVPLGNIELEKNLTYKERPIKVLEEAERQTRRKTIKFYKVQWSNHSED 743
Query: 1353 SLTWELESKMRESYPELFP 1371
TWE E +R +PEL P
Sbjct: 744 EATWEQEDLLRAEFPELLP 762
>UniRef100_Q7X726 OSJNBa0089N06.1 protein [Oryza sativa]
Length = 1851
Score = 119 bits (299), Expect = 5e-25
Identities = 56/139 (40%), Positives = 88/139 (63%)
Query: 1233 RGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHV 1292
+GDHV+LRV+P+ G+ R S KL P++IGPY I+ R G VAY++ LP L+++H+VFHV
Sbjct: 1713 KGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARRGEVAYQLELPEGLADVHNVFHV 1772
Query: 1293 SQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGE 1352
SQL+K + P + G++++ NLT + P+++ + + R K I +V W + +
Sbjct: 1773 SQLKKCLRVPEEQVPLGNIELEKNLTYKERPIKVLEEAERQTRRKTIKFYKVQWSNHSED 1832
Query: 1353 SLTWELESKMRESYPELFP 1371
TWE E +R +PEL P
Sbjct: 1833 EATWEREDLLRAEFPELLP 1851
>UniRef100_Q6AT86 Putative polyprotein [Oryza sativa]
Length = 1501
Score = 119 bits (299), Expect = 5e-25
Identities = 59/144 (40%), Positives = 87/144 (59%)
Query: 1234 GDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHVS 1293
GD+V+LRVTP+ GV R KL P+F+GPY+I ER G VAY++ LPP++ +HDVFHVS
Sbjct: 1353 GDYVYLRVTPLRGVHRFQTKGKLAPRFVGPYRILERRGEVAYQLELPPNMVGIHDVFHVS 1412
Query: 1294 QLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGES 1353
QL+K + P + ++++LT P+RI + + R K I +V W + E
Sbjct: 1413 QLKKCLRVPEEQASSEHIDIQEDLTYVEKPIRILETSERRTRNKVIRFCKVQWSHHSEEE 1472
Query: 1354 LTWELESKMRESYPELFP*GKISR 1377
TWE E +++ ++P LF SR
Sbjct: 1473 ATWEREDELKAAHPHLFANSSESR 1496
>UniRef100_Q7XQR0 OSJNBa0091D06.9 protein [Oryza sativa]
Length = 1762
Score = 119 bits (299), Expect = 5e-25
Identities = 56/139 (40%), Positives = 88/139 (63%)
Query: 1233 RGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHV 1292
+GDHV+LRV+P+ G+ R S KL P++IGPY I+ R G VAY++ LP L+++H+VFHV
Sbjct: 1624 KGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARRGEVAYQLELPEGLADVHNVFHV 1683
Query: 1293 SQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGE 1352
SQL+K + P + G++++ NLT + P+++ + + R K I +V W + +
Sbjct: 1684 SQLKKCLRVPEEQVPLGNIELEKNLTYKERPIKVLEEAERQTRRKTIKFYKVQWSNHSED 1743
Query: 1353 SLTWELESKMRESYPELFP 1371
TWE E +R +PEL P
Sbjct: 1744 EATWEQEDLLRAEFPELLP 1762
>UniRef100_Q7XPS2 OSJNBa0065O17.9 protein [Oryza sativa]
Length = 1851
Score = 119 bits (299), Expect = 5e-25
Identities = 56/139 (40%), Positives = 88/139 (63%)
Query: 1233 RGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHV 1292
+GDHV+LRV+P+ G+ R S KL P++IGPY I+ R G VAY++ LP L+++H+VFHV
Sbjct: 1713 KGDHVYLRVSPLRGMKRFGMSGKLAPRYIGPYLITARRGEVAYQLELPEGLADVHNVFHV 1772
Query: 1293 SQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGE 1352
SQL+K + P + G++++ NLT + P+++ + + R K I +V W + +
Sbjct: 1773 SQLKKCLRVPEEQVPLGNIELEKNLTYKKRPIKVLEEAERQTRRKTIKFYKVQWSNHSED 1832
Query: 1353 SLTWELESKMRESYPELFP 1371
TWE E +R +PEL P
Sbjct: 1833 EATWEQEDLLRAEFPELLP 1851
>UniRef100_Q6L494 Putative polyprotein [Oryza sativa]
Length = 1688
Score = 119 bits (299), Expect = 5e-25
Identities = 56/139 (40%), Positives = 88/139 (63%)
Query: 1233 RGDHVFLRVTPMTGVGRALKSKKLTPKFIGPYQISERVGTVAYRVGLPPHLSNLHDVFHV 1292
+GDHV+LRV+P+ G+ R S KL P++IGPY I+ R G VAY++ LP L+++H+VFHV
Sbjct: 1550 KGDHVYLRVSPLRGMRRFGMSGKLAPRYIGPYLITARRGEVAYQLELPEGLADVHNVFHV 1609
Query: 1293 SQLRKYVPDPSHVIHKGDVQVRDNLTVETLPLRIDDRKVKSLRGKEIPLVRVVWGGATGE 1352
SQL+K + P + G++++ NLT + P+++ + + R K I +V W + +
Sbjct: 1610 SQLKKCLRVPEEQVPLGNIELEKNLTYKERPIKVLEEAERQTRRKTIKFYKVQWSNHSED 1669
Query: 1353 SLTWELESKMRESYPELFP 1371
TWE E +R +PEL P
Sbjct: 1670 EATWEREDLLRAKFPELLP 1688
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.369 0.167 0.626
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,708,532,569
Number of Sequences: 2790947
Number of extensions: 56892895
Number of successful extensions: 254431
Number of sequences better than 10.0: 534
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 253512
Number of HSP's gapped (non-prelim): 877
length of query: 1380
length of database: 848,049,833
effective HSP length: 140
effective length of query: 1240
effective length of database: 457,317,253
effective search space: 567073393720
effective search space used: 567073393720
T: 11
A: 40
X1: 14 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 81 (35.8 bits)
Medicago: description of AC135234.2