BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135233.1 + phase: 0
(87 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q6ZHC0 Putative GAMM1 protein [Oryza sativa] 144 4e-34
UniRef100_Q9SG17 Hypothetical protein T1G12.2 [Arabidopsis thali... 141 5e-33
UniRef100_Q94A80 AT5g41970/MJC20_7 [Arabidopsis thaliana] 139 1e-32
UniRef100_Q9FHY6 GAMM1 protein-like [Arabidopsis thaliana] 139 1e-32
UniRef100_Q68BK8 GAMM1 protein-like protein [Nannochloris bacill... 121 4e-27
UniRef100_UPI00004302B9 UPI00004302B9 UniRef100 entry 111 5e-24
UniRef100_Q5PPU7 Hypothetical protein [Xenopus laevis] 107 7e-23
UniRef100_Q9P7T6 Hypothetical UPF0160 protein C694.04c in chromo... 106 1e-22
UniRef100_Q6GPT1 LOC443610 protein [Xenopus laevis] 106 2e-22
UniRef100_UPI00003C2885 UPI00003C2885 UniRef100 entry 105 3e-22
UniRef100_Q60VS1 Hypothetical protein CBG19425 [Caenorhabditis b... 105 3e-22
UniRef100_O17606 Hypothetical UPF0160 protein C27H6.8 in chromos... 104 6e-22
UniRef100_UPI00003AFA01 UPI00003AFA01 UniRef100 entry 103 8e-22
UniRef100_UPI00003AFA03 UPI00003AFA03 UniRef100 entry 103 1e-21
UniRef100_UPI00003AFA02 UPI00003AFA02 UniRef100 entry 103 1e-21
UniRef100_UPI0000219B80 UPI0000219B80 UniRef100 entry 102 2e-21
UniRef100_UPI000036894C UPI000036894C UniRef100 entry 99 2e-20
UniRef100_UPI000036894B UPI000036894B UniRef100 entry 99 2e-20
UniRef100_Q8WYI2 MSTP024 [Homo sapiens] 99 2e-20
UniRef100_Q86UA3 MYG1 protein [Homo sapiens] 99 2e-20
>UniRef100_Q6ZHC0 Putative GAMM1 protein [Oryza sativa]
Length = 352
Score = 144 bits (364), Expect = 4e-34
Identities = 67/86 (77%), Positives = 76/86 (87%)
Query: 1 MKIDPPIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
+KIDP KYVLY+DERSK WRVQAV V+PDRFESRK LP +WRGLRDD LS + GIPGCV
Sbjct: 266 LKIDPLTKYVLYQDERSKSWRVQAVGVAPDRFESRKPLPEKWRGLRDDELSNDIGIPGCV 325
Query: 61 FVHMSGFIGGNQTFEGALAMAKAALK 86
FVHMSGFIGGN+T+EGAL MA+AA+K
Sbjct: 326 FVHMSGFIGGNKTYEGALEMARAAIK 351
>UniRef100_Q9SG17 Hypothetical protein T1G12.2 [Arabidopsis thaliana]
Length = 354
Score = 141 bits (355), Expect = 5e-33
Identities = 66/85 (77%), Positives = 76/85 (88%)
Query: 1 MKIDPPIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
MKIDPPIKYVLY+D+RS+ WR+QAVSVSP+RFESRKALP WRGL + LS+ES IP CV
Sbjct: 268 MKIDPPIKYVLYQDDRSENWRIQAVSVSPERFESRKALPLAWRGLEKEKLSEESSIPRCV 327
Query: 61 FVHMSGFIGGNQTFEGALAMAKAAL 85
FVHMSGFIG NQT+EGALAMA+A+L
Sbjct: 328 FVHMSGFIGANQTYEGALAMARASL 352
>UniRef100_Q94A80 AT5g41970/MJC20_7 [Arabidopsis thaliana]
Length = 346
Score = 139 bits (351), Expect = 1e-32
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 1 MKIDPPIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
MKI+P IKYV+Y+DER+KQWRVQAV+V+PDRFE+RK LP +WRGLRD+ LSK + IPGCV
Sbjct: 260 MKIEPLIKYVIYQDERAKQWRVQAVAVAPDRFENRKPLPEKWRGLRDEELSKAAEIPGCV 319
Query: 61 FVHMSGFIGGNQTFEGALAMAKAALKM 87
FVHMSGFIGGNQ+++GAL+MA+ AL +
Sbjct: 320 FVHMSGFIGGNQSYDGALSMAQTALTL 346
>UniRef100_Q9FHY6 GAMM1 protein-like [Arabidopsis thaliana]
Length = 346
Score = 139 bits (351), Expect = 1e-32
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 1 MKIDPPIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
MKI+P IKYV+Y+DER+KQWRVQAV+V+PDRFE+RK LP +WRGLRD+ LSK + IPGCV
Sbjct: 260 MKIEPLIKYVIYQDERAKQWRVQAVAVAPDRFENRKPLPEKWRGLRDEELSKAAEIPGCV 319
Query: 61 FVHMSGFIGGNQTFEGALAMAKAALKM 87
FVHMSGFIGGNQ+++GAL+MA+ AL +
Sbjct: 320 FVHMSGFIGGNQSYDGALSMAQTALTL 346
>UniRef100_Q68BK8 GAMM1 protein-like protein [Nannochloris bacillaris]
Length = 225
Score = 121 bits (304), Expect = 4e-27
Identities = 59/85 (69%), Positives = 66/85 (77%)
Query: 3 IDPPIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFV 62
I +KYVLYEDER K+WR+QAV +P F+SRKALP WRGLRDD LS +GIPG VFV
Sbjct: 140 ISGQVKYVLYEDEREKKWRIQAVGTAPGSFDSRKALPVPWRGLRDDDLSGVTGIPGGVFV 199
Query: 63 HMSGFIGGNQTFEGALAMAKAALKM 87
H SGFIGGN T+EGAL MAK AL M
Sbjct: 200 HASGFIGGNATYEGALEMAKKALTM 224
>UniRef100_UPI00004302B9 UPI00004302B9 UniRef100 entry
Length = 336
Score = 111 bits (277), Expect = 5e-24
Identities = 55/86 (63%), Positives = 64/86 (73%), Gaps = 1/86 (1%)
Query: 2 KIDPPIKYVLY-EDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
K PI Y+LY E E S +WR+Q V SPD F +RK+LP WRG+RD LS+ SGIPG V
Sbjct: 250 KTSSPILYILYPESESSSKWRIQCVPESPDSFVNRKSLPEPWRGMRDSKLSEISGIPGGV 309
Query: 61 FVHMSGFIGGNQTFEGALAMAKAALK 86
FVH SGFIGGN+TFEG LAMAK AL+
Sbjct: 310 FVHASGFIGGNETFEGTLAMAKKALE 335
>UniRef100_Q5PPU7 Hypothetical protein [Xenopus laevis]
Length = 356
Score = 107 bits (267), Expect = 7e-23
Identities = 50/84 (59%), Positives = 63/84 (74%), Gaps = 1/84 (1%)
Query: 3 IDPPIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFV 62
++ +KYVLY D+ +K WRVQ V P+ F++R +LP WRGLR D LS SGIPGC+FV
Sbjct: 273 LEKQVKYVLYPDQSAK-WRVQCVPTGPNTFQNRLSLPEDWRGLRADDLSSVSGIPGCIFV 331
Query: 63 HMSGFIGGNQTFEGALAMAKAALK 86
H SGFIGGN+T EGAL MA+ AL+
Sbjct: 332 HASGFIGGNETHEGALEMARKALR 355
>UniRef100_Q9P7T6 Hypothetical UPF0160 protein C694.04c in chromosome I
[Schizosaccharomyces pombe]
Length = 324
Score = 106 bits (265), Expect = 1e-22
Identities = 51/83 (61%), Positives = 60/83 (71%), Gaps = 2/83 (2%)
Query: 3 IDPPIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFV 62
I+ KY +Y D K WRVQAVS+ P F R LP WRG+RD+ LS+ +GIPGC+FV
Sbjct: 239 IENQFKYAIYSD--GKAWRVQAVSIDPTSFTCRLPLPEPWRGIRDEKLSELTGIPGCIFV 296
Query: 63 HMSGFIGGNQTFEGALAMAKAAL 85
H SGFIGGNQTFEGAL MA+ AL
Sbjct: 297 HASGFIGGNQTFEGALEMARKAL 319
>UniRef100_Q6GPT1 LOC443610 protein [Xenopus laevis]
Length = 367
Score = 106 bits (264), Expect = 2e-22
Identities = 50/84 (59%), Positives = 63/84 (74%), Gaps = 1/84 (1%)
Query: 3 IDPPIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFV 62
++ +KYVLY D+ +K WRVQ V P+ F++R +LP WRGLR D LS SGIPGC+FV
Sbjct: 284 LEKQVKYVLYPDQSAK-WRVQCVPTGPNTFQNRLSLPEDWRGLRADDLSSISGIPGCIFV 342
Query: 63 HMSGFIGGNQTFEGALAMAKAALK 86
H SGFIGGN+T EGAL MA+ AL+
Sbjct: 343 HTSGFIGGNETQEGALEMARKALR 366
>UniRef100_UPI00003C2885 UPI00003C2885 UniRef100 entry
Length = 605
Score = 105 bits (262), Expect = 3e-22
Identities = 53/77 (68%), Positives = 59/77 (75%), Gaps = 1/77 (1%)
Query: 9 YVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFVHMSGFI 68
YV+Y DE K WRVQAV VS + F SRKALP WRG+RD LS+ +GIPGC+FVH SGFI
Sbjct: 260 YVVYPDESGK-WRVQAVPVSAESFVSRKALPEPWRGIRDQQLSELTGIPGCIFVHQSGFI 318
Query: 69 GGNQTFEGALAMAKAAL 85
GGN T EGAL MAK AL
Sbjct: 319 GGNATQEGALRMAKDAL 335
>UniRef100_Q60VS1 Hypothetical protein CBG19425 [Caenorhabditis briggsae]
Length = 341
Score = 105 bits (262), Expect = 3e-22
Identities = 52/85 (61%), Positives = 63/85 (73%), Gaps = 1/85 (1%)
Query: 4 DPPIKYVLYEDERSKQWRVQAVSVSP-DRFESRKALPSQWRGLRDDILSKESGIPGCVFV 62
D I Y+L+ D + WRVQA+ + FE+R LP+ WRGLRDD LSKESGIPG VFV
Sbjct: 243 DDKITYILFSDSTNSSWRVQAIPIDKMSSFENRMPLPAAWRGLRDDDLSKESGIPGGVFV 302
Query: 63 HMSGFIGGNQTFEGALAMAKAALKM 87
H+SGFIGGN T EGALAMA+ AL++
Sbjct: 303 HISGFIGGNLTREGALAMARKALEI 327
>UniRef100_O17606 Hypothetical UPF0160 protein C27H6.8 in chromosome V
[Caenorhabditis elegans]
Length = 340
Score = 104 bits (259), Expect = 6e-22
Identities = 52/85 (61%), Positives = 63/85 (73%), Gaps = 1/85 (1%)
Query: 4 DPPIKYVLYEDERSKQWRVQAVSVSP-DRFESRKALPSQWRGLRDDILSKESGIPGCVFV 62
D I Y+L+ D + WRVQA+ V FE+R LP+ WRGLRDD LSKESGIPG VFV
Sbjct: 243 DDNITYILFSDSTNASWRVQAIPVDKMSSFENRMPLPAAWRGLRDDDLSKESGIPGGVFV 302
Query: 63 HMSGFIGGNQTFEGALAMAKAALKM 87
H+SGFIGGN T EGA+AMA+ AL++
Sbjct: 303 HISGFIGGNLTREGAIAMARKALEI 327
>UniRef100_UPI00003AFA01 UPI00003AFA01 UniRef100 entry
Length = 299
Score = 103 bits (258), Expect = 8e-22
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
Query: 6 PIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFVHMS 65
P++ VL+ D RS QWRVQ+V V P FESR LP WRG+RD+ LS+ +GIPGCVFVH S
Sbjct: 216 PLQLVLFPD-RSGQWRVQSVPVGPRSFESRLPLPEPWRGVRDEALSQLTGIPGCVFVHSS 274
Query: 66 GFIGGNQTFEGALAMAKAALKM 87
GFIGGN+T EGAL MA+ L +
Sbjct: 275 GFIGGNRTREGALEMARRTLAL 296
>UniRef100_UPI00003AFA03 UPI00003AFA03 UniRef100 entry
Length = 286
Score = 103 bits (257), Expect = 1e-21
Identities = 51/80 (63%), Positives = 61/80 (75%), Gaps = 1/80 (1%)
Query: 6 PIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFVHMS 65
P++ VL+ D RS QWRVQ+V V P FESR LP WRG+RD+ LS+ +GIPGCVFVH S
Sbjct: 208 PLQLVLFPD-RSGQWRVQSVPVGPRSFESRLPLPEPWRGVRDEALSQLTGIPGCVFVHSS 266
Query: 66 GFIGGNQTFEGALAMAKAAL 85
GFIGGN+T EGAL MA+ L
Sbjct: 267 GFIGGNRTREGALEMARRTL 286
>UniRef100_UPI00003AFA02 UPI00003AFA02 UniRef100 entry
Length = 245
Score = 103 bits (257), Expect = 1e-21
Identities = 51/80 (63%), Positives = 61/80 (75%), Gaps = 1/80 (1%)
Query: 6 PIKYVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFVHMS 65
P++ VL+ D RS QWRVQ+V V P FESR LP WRG+RD+ LS+ +GIPGCVFVH S
Sbjct: 166 PLQLVLFPD-RSGQWRVQSVPVGPRSFESRLPLPEPWRGVRDEALSQLTGIPGCVFVHSS 224
Query: 66 GFIGGNQTFEGALAMAKAAL 85
GFIGGN+T EGAL MA+ L
Sbjct: 225 GFIGGNRTREGALEMARRTL 244
>UniRef100_UPI0000219B80 UPI0000219B80 UniRef100 entry
Length = 366
Score = 102 bits (254), Expect = 2e-21
Identities = 48/83 (57%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Query: 7 IKYVLYEDERSK--QWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCVFVHM 64
+ YVLY ++ + +WR+Q V VS D F+SR LP WRG RD+ L K +GIPGCVFVH
Sbjct: 283 VVYVLYPEKPTPDAKWRIQCVPVSKDSFQSRLPLPEAWRGFRDEELDKITGIPGCVFVHA 342
Query: 65 SGFIGGNQTFEGALAMAKAALKM 87
+GFIGGN+TFEGA+AMA+ AL++
Sbjct: 343 AGFIGGNKTFEGAMAMAQKALEL 365
>UniRef100_UPI000036894C UPI000036894C UniRef100 entry
Length = 284
Score = 99.4 bits (246), Expect = 2e-20
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 3 IDPPIK--YVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
+ PP+ +V+Y D+ QWR+Q V P F+SR LP WRGLRD+ L + SGIPGC+
Sbjct: 191 LSPPVAIFFVIYTDQAG-QWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCI 249
Query: 61 FVHMSGFIGGNQTFEGALAMAKAAL 85
FVH SGFIGG++T EGAL+MA+A L
Sbjct: 250 FVHASGFIGGHRTREGALSMARATL 274
>UniRef100_UPI000036894B UPI000036894B UniRef100 entry
Length = 376
Score = 99.4 bits (246), Expect = 2e-20
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 3 IDPPIK--YVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
+ PP+ +V+Y D+ QWR+Q V P F+SR LP WRGLRD+ L + SGIPGC+
Sbjct: 283 LSPPVAIFFVIYTDQAG-QWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCI 341
Query: 61 FVHMSGFIGGNQTFEGALAMAKAAL 85
FVH SGFIGG++T EGAL+MA+A L
Sbjct: 342 FVHASGFIGGHRTREGALSMARATL 366
>UniRef100_Q8WYI2 MSTP024 [Homo sapiens]
Length = 221
Score = 99.4 bits (246), Expect = 2e-20
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 3 IDPPIK--YVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
+ PP+ +V+Y D+ QWR+Q V P F+SR LP WRGLRD+ L + SGIPGC+
Sbjct: 128 LSPPVAIFFVIYTDQAG-QWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCI 186
Query: 61 FVHMSGFIGGNQTFEGALAMAKAAL 85
FVH SGFIGG++T EGAL+MA+A L
Sbjct: 187 FVHASGFIGGHRTREGALSMARATL 211
>UniRef100_Q86UA3 MYG1 protein [Homo sapiens]
Length = 376
Score = 99.4 bits (246), Expect = 2e-20
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 3/85 (3%)
Query: 3 IDPPIK--YVLYEDERSKQWRVQAVSVSPDRFESRKALPSQWRGLRDDILSKESGIPGCV 60
+ PP+ +V+Y D+ QWR+Q V P F+SR LP WRGLRD+ L + SGIPGC+
Sbjct: 283 LSPPVAIFFVIYTDQAG-QWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCI 341
Query: 61 FVHMSGFIGGNQTFEGALAMAKAAL 85
FVH SGFIGG++T EGAL+MA+A L
Sbjct: 342 FVHASGFIGGHRTREGALSMARATL 366
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.320 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,646,757
Number of Sequences: 2790947
Number of extensions: 4857814
Number of successful extensions: 9963
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9892
Number of HSP's gapped (non-prelim): 67
length of query: 87
length of database: 848,049,833
effective HSP length: 63
effective length of query: 24
effective length of database: 672,220,172
effective search space: 16133284128
effective search space used: 16133284128
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC135233.1