BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC134967.10 + phase: 0 /pseudo
         (624 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]              195  4e-48
UniRef100_Q9SN65 Hypothetical protein F25I24.40 [Arabidopsis tha...   192  2e-47
UniRef100_O81630 F8M12.22 protein [Arabidopsis thaliana]              192  2e-47
UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]                 189  3e-46
UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcrip...   188  5e-46
UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcrip...   187  6e-46
UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis tha...   187  8e-46
UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [A...   187  1e-45
UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcrip...   184  5e-45
UniRef100_Q8H992 Oryza sativa (japonica cultivar-group) retrotra...   181  6e-44
UniRef100_Q7XE51 Putative non-LTR retroelement reverse transcrip...   179  2e-43
UniRef100_Q8H807 Putative non-LTR retroelement reverse transcrip...   177  6e-43
UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa]        176  2e-42
UniRef100_Q7XMG7 OSJNBa0028I23.15 protein [Oryza sativa]              176  2e-42
UniRef100_Q9FYK1 F21J9.30 [Arabidopsis thaliana]                      175  3e-42
UniRef100_Q9FXJ5 F5A9.24 [Arabidopsis thaliana]                       175  3e-42
UniRef100_Q75GM6 Putative non-LTR retroelement reverse transcrip...   175  4e-42
UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcrip...   170  1e-40
UniRef100_Q9C6L3 Hypothetical protein F2J7.11 [Arabidopsis thali...   169  2e-40
UniRef100_O82276 Putative non-LTR retroelement reverse transcrip...   169  2e-40

>UniRef100_Q7XNY0 OSJNBb0015N08.11 protein [Oryza sativa]
          Length = 1026

 Score =  195 bits (495), Expect = 4e-48
 Identities = 124/350 (35%), Positives = 177/350 (50%), Gaps = 21/350 (6%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W  WI + V     +V VN      F   +GLRQGDPLSP LF LAAE L ++++   E 
Sbjct: 410 WCDWIMKVVMGGKVAVKVNDQIGSFFKTHKGLRQGDPLSPLLFNLAAEALTLLVQRAEEN 469

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
            L  G      N I +  LQ+ADDT+ L +    + + L+  L LFE +SGLK+NF+KS 
Sbjct: 470 SLIEGLGTNGDNKIAI--LQYADDTIFLINDKLDHAKNLKYILCLFEQLSGLKINFNKSE 527

Query: 121 LVGVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWNS 180
           +             +++ +CKVG +P  YL +PI         W+   N+++ +L  W  
Sbjct: 528 VFCFGEAKEKQDLYSNIFTCKVGSLPLKYLGIPIDQKRILNKDWKLAENKMEHKLGCWQG 587

Query: 181 RFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKISW 240
           R  S GGRL+LL S L+S+P+Y +SF++ P G+   ID     F      G    RK   
Sbjct: 588 RLQSIGGRLILLNSTLSSVPMYMISFYRLPKGVQERIDYFRKRFLWQEDQGI---RKYHL 644

Query: 241 LSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGE----LGG 296
           ++W  VC  ++ GGLGV  L+  N A+LGKW WR L +  G W  ++ A+Y       G 
Sbjct: 645 VNWPLVCSPRDQGGLGVLDLEAMNKAMLGKWIWR-LENEEGWWQEIIYAKYCSDKPLSGL 703

Query: 297 RLEVGGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
           RL+ G    S +W  V  ++D         F     + VG+G  T FW D
Sbjct: 704 RLKAGS---SHFWQGVMEVKDD--------FFSFCTKIVGNGEKTLFWED 742


>UniRef100_Q9SN65 Hypothetical protein F25I24.40 [Arabidopsis thaliana]
          Length = 1294

 Score =  192 bits (488), Expect = 2e-47
 Identities = 112/292 (38%), Positives = 168/292 (57%), Gaps = 5/292 (1%)

Query: 1    WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
            W KWI   V +   SVLVNG P      +RG+RQGDPLSP+LF+L A+ LN ++K+ V  
Sbjct: 964  WIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAE 1023

Query: 61   QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
                G  IG   P  V+HLQFADD+L     +  N +AL+    ++E  SG K+N  KSM
Sbjct: 1024 GDIRGIRIGNGVP-GVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSM 1082

Query: 121  LV-GVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWN 179
            +  G  +  +      ++L  +       YL +P     ++   +  I+ R+K R S W+
Sbjct: 1083 ITFGSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWS 1142

Query: 180  SRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKIS 239
            +++LS  G+ ++LKSV  S+PVYA+S FK P  I+S I++L +NF+      +   R+I 
Sbjct: 1143 AKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFW---WEKNAKKREIP 1199

Query: 240  WLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARY 291
            W++W+ +   K+ GGLG R L +FN ALL K  WRM+ +   L+ R++ ARY
Sbjct: 1200 WIAWKRLQYSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARY 1251


>UniRef100_O81630 F8M12.22 protein [Arabidopsis thaliana]
          Length = 1662

 Score =  192 bits (488), Expect = 2e-47
 Identities = 112/292 (38%), Positives = 168/292 (57%), Gaps = 5/292 (1%)

Query: 1    WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
            W KWI   V +   SVLVNG P      +RG+RQGDPLSP+LF+L A+ LN ++K+ V  
Sbjct: 984  WIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAE 1043

Query: 61   QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
                G  IG   P  V+HLQFADD+L     +  N +AL+    ++E  SG K+N  KSM
Sbjct: 1044 GDIRGIRIGNGVP-GVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSM 1102

Query: 121  LV-GVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWN 179
            +  G  +  +      ++L  +       YL +P     ++   +  I+ R+K R S W+
Sbjct: 1103 ITFGSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWS 1162

Query: 180  SRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKIS 239
            +++LS  G+ ++LKSV  S+PVYA+S FK P  I+S I++L +NF+      +   R+I 
Sbjct: 1163 AKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFW---WEKNAKKREIP 1219

Query: 240  WLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARY 291
            W++W+ +   K+ GGLG R L +FN ALL K  WRM+ +   L+ R++ ARY
Sbjct: 1220 WIAWKRLQYSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARY 1271


>UniRef100_Q8LMT3 Putative retroelement [Oryza sativa]
          Length = 764

 Score =  189 bits (479), Expect = 3e-46
 Identities = 111/347 (31%), Positives = 182/347 (51%), Gaps = 19/347 (5%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W +W+K        +V +NG   D F   RG+RQGDPLSP LF L A+ L+ ++ +  +A
Sbjct: 146 WIQWVKMATIGGKMAVNINGEVKDFFKTYRGVRQGDPLSPLLFNLVADALSEMLNNAKQA 205

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
                  +    P  ++HLQ+ADDT+L  + +  N+  ++  L  +EAMSGLK+N+ KS 
Sbjct: 206 -------VPHLVPGGLTHLQYADDTILFMTNTEENIVTVKFLLYCYEAMSGLKINYQKSE 258

Query: 121 LVGVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWNS 180
           ++ +          A + +C+ G +PF YL +PI  N       +   N+I+ RL+ W  
Sbjct: 259 IMVIGGDEMETQRVADLFNCQAGKMPFTYLGIPISMNKLTNADLDIPPNKIEKRLATWKC 318

Query: 181 RFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKISW 240
            +LS+GG+ +L+ S L+S+P+Y +  +  P G+ + +DS+   FF     G E  RK   
Sbjct: 319 GYLSYGGKAILINSCLSSIPLYMMGVYLLPEGVHNKMDSIRARFF---WEGLEKKRKYHM 375

Query: 241 LSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARY-GELGGRLE 299
           + W+ +C  KE GGLG    ++ N+ALL KW +R+   +      +L  +Y  + GG  +
Sbjct: 376 IKWEALCRPKEFGGLGFIDTRKMNIALLCKWIYRLESGKEDPCCVLLRNKYMKDGGGFFQ 435

Query: 300 VGGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
                 S +W  +  ++  +  G S         +VG+G  T+FWSD
Sbjct: 436 SKAEESSQFWKGLHEVKKWMDLGSS--------YKVGNGKATNFWSD 474


>UniRef100_Q9SIQ5 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  188 bits (477), Expect = 5e-46
 Identities = 111/292 (38%), Positives = 165/292 (56%), Gaps = 5/292 (1%)

Query: 1    WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
            W  WI   V +   SVL+NGSP       RG+RQGDPLSP+LF+L  + L+ ++     +
Sbjct: 758  WIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASS 817

Query: 61   QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
                G  IG   P  ++HLQFADD+L     +  N +AL+    ++E  SG K+N  KSM
Sbjct: 818  GDLRGVRIGNGAP-AITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSM 876

Query: 121  LV-GVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWN 179
            +  G  +  S   +   +L          YL +P     ++   +E I++R+K R S W+
Sbjct: 877  ITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWS 936

Query: 180  SRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKIS 239
            +RFLS  G+ ++LKSV  ++PVYA+S FK P GI+S I+SL +NF+      + + R I 
Sbjct: 937  ARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFW---WEKASNQRGIP 993

Query: 240  WLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARY 291
            W++W+ +   K+ GGLG R L +FN ALL K  WR++     L+ RV+ ARY
Sbjct: 994  WVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARY 1045


>UniRef100_Q9SKJ4 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  187 bits (476), Expect = 6e-46
 Identities = 111/292 (38%), Positives = 164/292 (56%), Gaps = 5/292 (1%)

Query: 1    WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
            W  WI   V +   SVL+NGSP       RG+RQGDPLSP+LF+L  + L+ ++     +
Sbjct: 984  WIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASS 1043

Query: 61   QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
                G  IG   P  ++HLQFADD+L     +  N +AL+    ++E  SG K+N  KSM
Sbjct: 1044 GDLRGVRIGNGAP-AITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSM 1102

Query: 121  LV-GVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWN 179
            +  G  +  S       +L          YL +P     ++   +E I++R+K R S W+
Sbjct: 1103 ITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWS 1162

Query: 180  SRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKIS 239
            +RFLS  G+ ++LKSV  ++PVYA+S FK P GI+S I+SL +NF+      + + R I 
Sbjct: 1163 ARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFW---WEKASNQRGIP 1219

Query: 240  WLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARY 291
            W++W+ +   K+ GGLG R L +FN ALL K  WR++     L+ RV+ ARY
Sbjct: 1220 WVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARY 1271


>UniRef100_Q9M1F2 Hypothetical protein F9K21.130 [Arabidopsis thaliana]
          Length = 851

 Score =  187 bits (475), Expect = 8e-46
 Identities = 119/332 (35%), Positives = 182/332 (53%), Gaps = 14/332 (4%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W  WI   V +   SVL+NGSP       RG+RQGDPLSP+LF+L  + L+ ++K    +
Sbjct: 223 WIGWIMAAVKSVHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASS 282

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
               G  IG   P  ++HLQFADD+L     +  N +AL+    ++E  SG K+N  KS+
Sbjct: 283 GDIRGVRIGNGAP-AITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSL 341

Query: 121 LV-GVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWN 179
           +  G  +  S      ++L+         YL +P     ++   +  I++R+K R + W+
Sbjct: 342 ITFGSRVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWS 401

Query: 180 SRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKIS 239
           ++FLS  G+ +LLKSV  ++PVYA+S FK P GI+S I+SL +NF+      + + R I 
Sbjct: 402 AKFLSPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFW---WEKASNKRGIP 458

Query: 240 WLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGGRLE 299
           W++W+ +   K+ GGLG R L +FN ALL K  WR++     L+ RV+ ARY +    ++
Sbjct: 459 WVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRIIQYPNSLFARVMKARYFKDNSIID 518

Query: 300 VGGRSVSCW-WSE----VRRLRDG----VGDG 322
              RS   + WS     +  LR G    +GDG
Sbjct: 519 AKTRSQQSYGWSSLLSGIALLRKGTRYVIGDG 550


>UniRef100_Q9C697 Reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  187 bits (474), Expect = 1e-45
 Identities = 116/350 (33%), Positives = 181/350 (51%), Gaps = 18/350 (5%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W  WI  C++T    VL+NG P      +RGLRQGDPLSP+LF+L  E L   ++     
Sbjct: 386 WISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQ 445

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
            L +G  +   +P  VSHL FADD+L     +      +   L  +E++SG ++NF KS 
Sbjct: 446 NLITGIKVATPSP-AVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSS 504

Query: 121 L-VGVNIGSSWLYEAASVLSCK--VGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSG 177
           +  G  +  S   +   +L      G+  +L L   +GG+  ++  +  + +R++SR++G
Sbjct: 505 IQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKV--FSFVRDRLQSRING 562

Query: 178 WNSRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRK 237
           W+++FLS GG+ V++KSV  +LP Y +S F+ P  I S + S    F+    G   D+R 
Sbjct: 563 WSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNG---DSRG 619

Query: 238 ISWLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGGR 297
           + W++W  +C  K  GGLG R + +FN ALL K  WR++     L+ +V   RY      
Sbjct: 620 MHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNP 679

Query: 298 LE-VGGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
           L+ +   S S  W  +   R  V  G        +++RVG G   S W+D
Sbjct: 680 LDSIKSYSPSYGWRSMISARSLVYKG--------LIKRVGSGASISVWND 721


>UniRef100_Q7XJS2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1344

 Score =  184 bits (468), Expect = 5e-45
 Identities = 122/358 (34%), Positives = 186/358 (51%), Gaps = 32/358 (8%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W  WI  CV++ + SVL+NG P       RG+RQGDPLSP LF+L  E L  ++    +A
Sbjct: 580 WISWIMNCVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQA 639

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
              +G        + V+HL FADDTLL+   +      L   L  +  +SG  +N +KS 
Sbjct: 640 GKITGIQF-QDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSA 698

Query: 121 LV-GVNIG---SSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLS 176
           +  G N+      W+ ++ S +S + G   +L L   + G+ R L  +  I  +++SRL+
Sbjct: 699 ITFGKNVDIQIKDWI-KSRSGISLEGGTGKYLGLPECLSGSKRDLFGF--IKEKLQSRLT 755

Query: 177 GWNSRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNR 236
           GW ++ LS GG+ VLLKS+  +LPVY +S FK P  +   + ++ ++F+       +  R
Sbjct: 756 GWYAKTLSQGGKEVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNS---MQQKR 812

Query: 237 KISWLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGG 296
           KI WLSWQ + L K+ GG G + L+ FN ALL K  WR+L ++G L+ RV  +RY     
Sbjct: 813 KIHWLSWQRLTLPKDQGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSD 872

Query: 297 RLEV--GGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRR-----VGDGVVTSFWSDR 347
            L    G R    W S +              FG ++L +     +G+G  T  W+D+
Sbjct: 873 FLSATRGSRPSYAWRSIL--------------FGRELLMQGLRTVIGNGQKTFVWTDK 916


>UniRef100_Q8H992 Oryza sativa (japonica cultivar-group) retrotransposon Karma DNA,
           complete sequence [Oryza sativa]
          Length = 1197

 Score =  181 bits (459), Expect = 6e-44
 Identities = 120/347 (34%), Positives = 184/347 (52%), Gaps = 20/347 (5%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W  WIK  + T+ ++VL+NG P      K+GLRQGDPLSP+LF+L A+    V++ L+E 
Sbjct: 612 WISWIKSLLQTSKSAVLLNGIPGKWINCKKGLRQGDPLSPYLFILVAD----VLQRLLEK 667

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
                + I    P     +Q+ADDTL++      +V ALR+ L+ F   +GL++NF KS 
Sbjct: 668 NFQIRHPIYQDRPCAT--IQYADDTLVICRAEEDDVLALRSTLLQFSKATGLQINFAKST 725

Query: 121 LVGVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWNS 180
           ++ ++I  S     + +L CK+  +P  YL +P+  +       +PIV ++ S L+GW +
Sbjct: 726 MISLHIDRSKESSLSELLQCKLESLPMSYLGLPLSLHKLTNNDLQPIVVKVDSFLTGWEA 785

Query: 181 RFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKISW 240
             LS   RL+L+ +VL+S+PVYA+S FK P  +I +ID     FF  G       + +  
Sbjct: 786 SLLSQAERLILVNAVLSSVPVYAMSAFKLPPKVIEAIDKRRRAFFWTGDDTCSGAKCL-- 843

Query: 241 LSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGGRLEV 300
           ++W  VC  KE GGLG++ LK  N ALL K  + +  D    W   +   + E  GR  +
Sbjct: 844 VAWDEVCTAKEKGGLGIKSLKTQNEALLLKRLFNLFSDNSS-WTNWI---WKEFDGRSLL 899

Query: 301 GGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSDR 347
               +   WS  ++L   +       F    +  +GDG  TSFW DR
Sbjct: 900 KSLPLGQHWSVFQKLLPEL-------FKITTV-HIGDGSRTSFWHDR 938


>UniRef100_Q7XE51 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
          Length = 1652

 Score =  179 bits (454), Expect = 2e-43
 Identities = 117/347 (33%), Positives = 170/347 (48%), Gaps = 14/347 (4%)

Query: 1    WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
            W  WI   V   + +V VN      F  ++GLRQGDPLSP LF L  + L I+++   + 
Sbjct: 1318 WCDWIDSIVRGGSVAVKVNDEIGSYFQTRKGLRQGDPLSPILFNLVVDMLAILIQRAKDQ 1377

Query: 61   QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
              F G      +   +S LQ+ADDT+L         R L+  L  FE +S LK+NF+KS 
Sbjct: 1378 GRFKGVVPHLVDN-GLSILQYADDTILFMDHDLDEARDLKLVLSTFEKLSSLKINFYKSE 1436

Query: 121  LVGVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWNS 180
            L          +E   +  C     PF YL + +         W+ +  RI+ +LS W  
Sbjct: 1437 LFCYGKAKDVEHEYVKLFGCDTEDYPFKYLGIRMHHKRINNKDWQGVEERIQKKLSSWKG 1496

Query: 181  RFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKISW 240
            +FLS GGRLVL+ SVL++L ++ LSFF+ P GI+  +D     FF       E  +K   
Sbjct: 1497 KFLSVGGRLVLINSVLSNLAIFMLSFFEIPKGILKKLDYYRSRFF---WQCDEHKKKYRL 1553

Query: 241  LSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGGRLEV 300
              W  +C  KECGGLG++ L+  N  LL KW ++ L++  G+W  +L  +Y       +V
Sbjct: 1554 ARWSVLCKPKECGGLGIQNLEIQNKCLLSKWLYK-LINEEGVWQDILRNKYLTKKTITQV 1612

Query: 301  GG-RSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
                  S +W+ +  +RD    GG+         +VGDG    FW D
Sbjct: 1613 EKCPGDSHFWAGLMGVRDVFFKGGA--------FKVGDGSQIRFWED 1651


>UniRef100_Q8H807 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
          Length = 603

 Score =  177 bits (450), Expect = 6e-43
 Identities = 105/279 (37%), Positives = 150/279 (53%), Gaps = 5/279 (1%)

Query: 13  TASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEAQLFSGYSIGAAN 72
           + +V VN    + F  K+GLRQGDPLSP LF L A+ L+I+++   +   F G  I    
Sbjct: 68  SVAVKVNDHIGNFFQTKKGLRQGDPLSPILFNLVADMLSILIQRAKDQGRFQGV-IPHLV 126

Query: 73  PIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSMLVGVNIGSSWLY 132
              +S LQ+ADDT+L        V+ L+  L  FE ++GLK+NFHKS L           
Sbjct: 127 DNGLSILQYADDTILFMEHDLDEVKNLKLVLSTFEKLAGLKINFHKSELFCYGKSKFAEN 186

Query: 133 EAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWNSRFLSFGGRLVLL 192
           E   +  C+ G  PF YL +P+         W+ I  R + +LS W  + LS GGRLVL+
Sbjct: 187 EYVMLFGCRSGTYPFRYLGIPMHHKKLSNKDWQIIEERFQRKLSSWKGKCLSVGGRLVLI 246

Query: 193 KSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKISWLSWQTVCLKKEC 252
            SVL+SL ++ LSFF+ P GI+  +D     FF    G     RK     W  +C  K+C
Sbjct: 247 NSVLSSLAMFMLSFFEVPKGILKKLDYYRSRFFWQSDG---HKRKYRLARWSVICTPKDC 303

Query: 253 GGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARY 291
           GGLG++ L   N  LL KW ++ L++  G+W ++L  +Y
Sbjct: 304 GGLGIQNLNVQNKCLLSKWLYK-LINEDGVWQKLLRKKY 341


>UniRef100_Q8S6P1 Putative reverse transcriptase [Oryza sativa]
          Length = 1509

 Score =  176 bits (446), Expect = 2e-42
 Identities = 119/349 (34%), Positives = 172/349 (49%), Gaps = 16/349 (4%)

Query: 1    WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
            W   I +CVST T  + VNG  ++ F  +RGLRQGDPLSP+LFLL AEG + ++    E 
Sbjct: 803  WVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEE 862

Query: 61   QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKS- 119
                G  I    P  VSHL FADD+L+L   +    + L+  L ++E  SG  +N  KS 
Sbjct: 863  GRLHGIRICQGAP-SVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSA 921

Query: 120  MLVGVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWN 179
            ++   N  S       + L+ +       YL +P+     R   +  +  RI  R+ GW 
Sbjct: 922  VMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWK 981

Query: 180  SRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKIS 239
             + LS  G+ +L+K+V   +P +A+  F+    +   I  +   ++       E + K+ 
Sbjct: 982  EKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYW---WSNQEKDNKMH 1038

Query: 240  WLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGGRLE 299
            WLSW  + L K  GGLG R +  FNLA+L K  WR++ D   L  RVL A+Y  LG    
Sbjct: 1039 WLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFR 1098

Query: 300  VGGRS-VSCWWSEVRR-LRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
                S VS  W  +++ LR  V   G  W       RVGDG   + W+D
Sbjct: 1099 PKQTSNVSYTWRSIQKGLR--VLQNGMIW-------RVGDGSKINIWAD 1138


>UniRef100_Q7XMG7 OSJNBa0028I23.15 protein [Oryza sativa]
          Length = 593

 Score =  176 bits (445), Expect = 2e-42
 Identities = 119/352 (33%), Positives = 171/352 (47%), Gaps = 30/352 (8%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W KWI + V   + +V VN    + F  K+GLRQGDPLSP LF L A+ L ++++   E 
Sbjct: 53  WCKWIDQVVRGGSVAVKVNDEIGNFFQTKKGLRQGDPLSPLLFNLVADMLAVLIQRTSE- 111

Query: 61  QLFSGYSIGAANPIV---VSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFH 117
               G   G    +V   +S LQ+ADDT+L       + + L+  L  FE +SGLK+NFH
Sbjct: 112 ---HGKIHGVIPHLVDDGLSILQYADDTILFMEHDLEDAKNLKLVLSAFERLSGLKINFH 168

Query: 118 KSMLVGVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSG 177
           KS L+          E A +  CK G     YL +P+         W+ +  R + RL  
Sbjct: 169 KSELLCFGKAIEVEREYALLFGCKTGSYTLKYLGLPMHYRKLSNKDWKEVEERFQKRLGS 228

Query: 178 WNSRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRK 237
           W  + LS GGRLVL+ SVL+SL +Y LSFF+ P GII  +D     FF       E  +K
Sbjct: 229 WKGKLLSVGGRLVLINSVLSSLAMYMLSFFEVPKGIIKKLDYYRSRFF---WQSDEHKKK 285

Query: 238 ISWLSWQTVCLKKECGGLGVRKLKEFNLAL---LGKWCWRMLVDRGGLWYRVLVARYGEL 294
                W  +C  KECGGLG++ L+  N  L   L K  W+ L+ +  L  + ++    + 
Sbjct: 286 YRLARWSVLCKPKECGGLGIQNLEVQNKCLLRGLAKLVWQNLLRKKYLAKKTIMQVQKQR 345

Query: 295 GGRLEVGGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
           G          S +W+ +  ++D     GS         ++ DG+   FW D
Sbjct: 346 GD---------SHFWTGLMGVKDTFSSFGS--------FKLQDGLQIRFWED 380


>UniRef100_Q9FYK1 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  175 bits (444), Expect = 3e-42
 Identities = 119/351 (33%), Positives = 174/351 (48%), Gaps = 20/351 (5%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W  WI  CVS+ T SVL+N  P     L+RGLRQGDPLSPFLF+L  EGL  ++      
Sbjct: 565 WVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQWE 624

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
               G       P +V HL FADD+L L   S      L+  L ++   +G  +N +KS 
Sbjct: 625 GALEGIQFSENGP-MVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQTINLNKS- 682

Query: 121 LVGVNIGSSWLYEAASVLSCKVGIV----PFLYLDMPIGGNPRRLCFWEPIVNRIKSRLS 176
              +  G     +    +   +GI        YL +P   +  ++     + +R+K +L 
Sbjct: 683 --SITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRLKEKLD 740

Query: 177 GWNSRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNR 236
            W +R LS GG+ VLLKSV  ++PV+A+S FK P     +++S   +F+       + +R
Sbjct: 741 VWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFW---WDSCDHSR 797

Query: 237 KISWLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGG 296
           KI W SW+ +CL K+ GGLG R ++ FN ALL K  WR+L     L  R+L +RY +   
Sbjct: 798 KIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATD 857

Query: 297 RLEVG-GRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
            L+    +  S  W  +   R+ +  G        + +RVGDG     W D
Sbjct: 858 FLDAALSQRPSFGWRSILFGRELLSKG--------LQKRVGDGASLFVWID 900


>UniRef100_Q9FXJ5 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  175 bits (444), Expect = 3e-42
 Identities = 119/351 (33%), Positives = 174/351 (48%), Gaps = 20/351 (5%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W  WI  CVS+ T SVL+N  P     L+RGLRQGDPLSPFLF+L  EGL  ++      
Sbjct: 568 WVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQWE 627

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
               G       P +V HL FADD+L L   S      L+  L ++   +G  +N +KS 
Sbjct: 628 GALEGIQFSENGP-MVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQTINLNKS- 685

Query: 121 LVGVNIGSSWLYEAASVLSCKVGIV----PFLYLDMPIGGNPRRLCFWEPIVNRIKSRLS 176
              +  G     +    +   +GI        YL +P   +  ++     + +R+K +L 
Sbjct: 686 --SITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRLKEKLD 743

Query: 177 GWNSRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNR 236
            W +R LS GG+ VLLKSV  ++PV+A+S FK P     +++S   +F+       + +R
Sbjct: 744 VWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFW---WDSCDHSR 800

Query: 237 KISWLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGG 296
           KI W SW+ +CL K+ GGLG R ++ FN ALL K  WR+L     L  R+L +RY +   
Sbjct: 801 KIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATD 860

Query: 297 RLEVG-GRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
            L+    +  S  W  +   R+ +  G        + +RVGDG     W D
Sbjct: 861 FLDAALSQRPSFGWRSILFGRELLSKG--------LQKRVGDGASLFVWID 903


>UniRef100_Q75GM6 Putative non-LTR retroelement reverse transcriptase [Oryza sativa]
          Length = 1614

 Score =  175 bits (443), Expect = 4e-42
 Identities = 110/346 (31%), Positives = 173/346 (49%), Gaps = 13/346 (3%)

Query: 1    WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
            W  WIK CV      + +NG  TD F   RGLRQGDPLSP LF L ++ L  ++ S    
Sbjct: 1229 WVNWIKTCVMGGRVCININGERTDFFRTFRGLRQGDPLSPLLFNLISDALAAMLDSAKRE 1288

Query: 61   QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
             + SG  +    P  ++HLQ+ADDT+L  +     + A +  L  FE M+ LKVN+HKS 
Sbjct: 1289 GVLSGL-VPDIFPGGITHLQYADDTVLFVANDDKQIVATKFILYCFEEMAVLKVNYHKSE 1347

Query: 121  LVGVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWNS 180
            +  + +  +     A + +C VG  P  YL +PIG +      ++ +  +++ RL+ W +
Sbjct: 1348 IFTLGLSDNDTNRVAMMFNCPVGQFPMKYLGLPIGPDKILNLGFDFLGQKLEKRLNSWGN 1407

Query: 181  RFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKISW 240
              LS  GR V + + L+S+P YA+ F++ P G+     S+   ++      +    K   
Sbjct: 1408 N-LSHAGRAVQINTCLSSIPSYAMCFYQLPEGVHQKFGSIRGRYY---WARNRLKGKYHM 1463

Query: 241  LSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGGRLEV 300
            + W+ +   K+ GGLG  + +  N ALL KW  ++  +   L   +L  +Y + GG  + 
Sbjct: 1464 VKWEDLAFPKDYGGLGFTETRRMNTALLAKWIMKIESEDDSLCIELLRRKYLQDGGFFQC 1523

Query: 301  GGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSD 346
              R  S +W  +  +R  +   GS W       +VGDG   SFW D
Sbjct: 1524 KERYASQFWKGLLNIRRWL-SLGSVW-------QVGDGSHISFWRD 1561


>UniRef100_Q9SHP2 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score =  170 bits (430), Expect = 1e-40
 Identities = 100/295 (33%), Positives = 156/295 (51%), Gaps = 11/295 (3%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W  WI  C++T T S+L+NG P      KRG+RQGDP+SP+L+LL  EGL+ ++++ ++A
Sbjct: 57  WCNWIMTCITTTTYSILINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLSALIQASIKA 116

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
           +   G+      P  +SHL FA D+L+    +      L   L L+E  SG  VNF KS 
Sbjct: 117 KQLHGFKASRNGP-AISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSA 175

Query: 121 LVGVNIGSSWLYEAASVLSCKVGIVPF----LYLDMPIGGNPRRLCFWEPIVNRIKSRLS 176
           ++    G    +  +  LS  +GI        YL +P      +   +  I   +  ++ 
Sbjct: 176 IL---FGKGLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMD 232

Query: 177 GWNSRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNR 236
            W ++ LS  G+ VL+KS++T++P Y++S F  P  +I  I S    F+      ++   
Sbjct: 233 NWYNKLLSPAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFW---WSNTKVKH 289

Query: 237 KISWLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARY 291
           KI W++W  +   K+ GGL +R LK+FN+ALL K  WR+L     L  RV  A+Y
Sbjct: 290 KIPWVAWSKLNDPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKY 344


>UniRef100_Q9C6L3 Hypothetical protein F2J7.11 [Arabidopsis thaliana]
          Length = 1213

 Score =  169 bits (429), Expect = 2e-40
 Identities = 118/347 (34%), Positives = 174/347 (50%), Gaps = 21/347 (6%)

Query: 4   WIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEAQLF 63
           WI +C+ST T +V +NG     F   +GLRQGDPLSP+LF+LA E  + ++ S  E+ L 
Sbjct: 622 WISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLI 681

Query: 64  SGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKS--ML 121
             Y   A+N + +SHL FADD ++       ++  +   L  F + SGLKVN  KS   L
Sbjct: 682 H-YHPKASN-LSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYL 739

Query: 122 VGVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSGWNSR 181
            G+N   S    A +     +G +P  YL +P+     R+  +EP++ +I +R   W ++
Sbjct: 740 AGLNQLES---NANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNK 796

Query: 182 FLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRKISWL 241
            LSF GR+ L+ SV+     + +S F  P G I  I+SL   F   G        K+SW 
Sbjct: 797 CLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWA 856

Query: 242 SWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGGRLEV- 300
           +   +CL K  GGLG+R+L E+N  L  +  WR+ V +  LW       +   G    V 
Sbjct: 857 A---LCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVE 913

Query: 301 GGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVL-RRVGDGVVTSFWSD 346
           GG+S S  W  +  LR             Q L  +VG+G+   +W D
Sbjct: 914 GGQSDSWTWKRLLSLRP---------LAHQFLVCKVGNGLKADYWYD 951


>UniRef100_O82276 Putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  169 bits (429), Expect = 2e-40
 Identities = 121/355 (34%), Positives = 176/355 (49%), Gaps = 23/355 (6%)

Query: 1   WRKWIKECVSTATASVLVNGSPTDEFPLKRGLRQGDPLSPFLFLLAAEGLNIVMKSLVEA 60
           W   I   V+  + SVL NG  TD F   RGLRQGDPLSP+LF+L  E L  ++++ V  
Sbjct: 465 WTSRIMAGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGK 524

Query: 61  QLFSGYSIGAANPIVVSHLQFADDTLLLGSKSWANVRALRAALVLFEAMSGLKVNFHKSM 120
           + +   ++       +SH+ FADD +L    S A +R +R  L  F   SG KV+  KS 
Sbjct: 525 REWKPIAVSCGGS-KLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSK 583

Query: 121 LV---GVNIGSSWLYEAASVLSCKVGIVPFLYLDMPIGGNPRRLCFWEPIVNRIKSRLSG 177
           +     V+     L    S + C   +    YL MPI         +  ++ R+ +RL+G
Sbjct: 584 IFFSHNVSREMEQLISEESGIGCTKELGK--YLGMPILQKRMNKETFGEVLERVSARLAG 641

Query: 178 WNSRFLSFGGRLVLLKSVLTSLPVYALSFFKAPTGIISSIDSLFINFFLGGGGGSEDNRK 237
           W  R LS  GR+ L K+VL+S+PV+ +S    P   + ++D     F  G    + + +K
Sbjct: 642 WKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGS---TMEKKK 698

Query: 238 ISWLSWQTVCLKKECGGLGVRKLKEFNLALLGKWCWRMLVDRGGLWYRVLVARYGELGG- 296
              LSW+ +C  K  GG+G+R  ++ N AL+ K  WR+L D+  LW RV+  +Y ++GG 
Sbjct: 699 QHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKY-KVGGV 757

Query: 297 ----RLEVGGRSVSCWWSEVRRLRDGVGDGGSGWFGDQVLRRVGDGVVTSFWSDR 347
                L+   R  S W S    LR+ V   G GW         GDG    FW DR
Sbjct: 758 QDTSWLKPQPRWSSTWRSVAVGLREVVVK-GVGWV-------PGDGCTIRFWLDR 804


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.348    0.155    0.570 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 976,969,694
Number of Sequences: 2790947
Number of extensions: 39545716
Number of successful extensions: 141124
Number of sequences better than 10.0: 627
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 139659
Number of HSP's gapped (non-prelim): 847
length of query: 624
length of database: 848,049,833
effective HSP length: 134
effective length of query: 490
effective length of database: 474,062,935
effective search space: 232290838150
effective search space used: 232290838150
T: 11
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.7 bits)
S2: 78 (34.7 bits)