BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC134824.6 - phase: 0 
         (2242 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]                 2347  0.0
UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]                 1655  0.0
UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic ...   905  0.0
UniRef100_Q6L974 GAG-POL [Vitis vinifera]                             765  0.0
UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]                      763  0.0
UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sa...   752  0.0
UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]               699  0.0
UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]                      698  0.0
UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]                  697  0.0
UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]                  695  0.0
UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]               694  0.0
UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]              694  0.0
UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]          692  0.0
UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]                      692  0.0
UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]                 691  0.0
UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]               690  0.0
UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]                  688  0.0
UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]               684  0.0
UniRef100_Q93Y89 Gag-pol [Oryza sativa]                               681  0.0
UniRef100_Q9SSW6 GAG-POL [Oryza sativa]                               679  0.0

>UniRef100_Q6WAY3 Gag/pol polyprotein [Pisum sativum]
          Length = 2262

 Score = 2347 bits (6082), Expect = 0.0
 Identities = 1233/2327 (52%), Positives = 1587/2327 (67%), Gaps = 158/2327 (6%)

Query: 7    QLRTELASLREELAKAHDAMTALLAAQEQPVPVVSTAANVTPTVTTDPRSIMPSGYPYGL 66
            Q++TELA +R  +A+    M  +   QE+   +V     VTP     P   +P G P   
Sbjct: 3    QVQTELAEMRANMAQFMHMMQGVAQGQEELRALVQRQEAVTPP----PNQALPEGNP--- 55

Query: 67   PLYYTANTGAGTSGTTNNGPIPGANLTPVSTALTQA-ATTVTEPIVNAVP-------LFV 118
             ++ T       +       + G  +     A   A A  +  P  N +P       LF 
Sbjct: 56   -VHDTPAAAIPVNNYAVGEELMGIRVDGQPIAPDAANARVIHAPARNRIPIVDRQEDLFT 114

Query: 119  HANAHHGSIATTGTMEERMEELAKELQREIKANRGNGDSIKTQDLCLVSKVDVPKKFKVP 178
              +            + +++ LA+++ R ++     G  +   ++ LV  + +P KFK P
Sbjct: 115  MFSEDEDIPGRNDARDRKVDALAEKI-RAMECQNSLGFDVT--NMGLVEGLRIPYKFKAP 171

Query: 179  EFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHYFQDSLMEDAAEWYTSLSKDDVHTFD 238
             FDKYNG +CP+ H+  Y RK+  Y D++ + +++FQDSL   + +WY  L  D +  + 
Sbjct: 172  SFDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKSDSIRCWR 231

Query: 239  ELATAFRSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEMTQT 298
            +L  AF   Y  N  + P+R  L+SL QK  ESF+EYAQRWR  AAR+ P + E E+T  
Sbjct: 232  DLGEAFLRQYKHNMDMAPSRTQLQSLCQKSNESFKEYAQRWRELAARVQPPMLERELTDM 291

Query: 299  FLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESSVGASKRYGNGHH 358
            F+ TL+  +++RM      +FS++V  G R E  ++ G I     +    +SK+   G  
Sbjct: 292  FIGTLQGVFMDRMGSCPFGSFSDVVICGERTESLIKTGKI----QDVGSSSSKKPFAGAP 347

Query: 359  KKKETEVGMVSAGAGQSIATVAPINTAQMPPSYPYMPYSQHSFFPPFYHQYPLPPGQPQV 418
            +++E E   V     Q+                  + Y Q +          +P  QP+ 
Sbjct: 348  RRREGETNAVQHRRDQN-----------------RIEYRQAA-------AVTIPAPQPRQ 383

Query: 419  PVNAIAQQIKQQLPVQQQQQQQQQQYTRPT-------FPPIPMLYAELLPTLLQRGH--- 468
                     +QQ  VQQ QQQQQQ+  +P        F  +PM YAELLP LL+ G    
Sbjct: 384  ---------QQQQRVQQPQQQQQQRPYQPRQRMPDRRFDSLPMSYAELLPELLRLGLVEL 434

Query: 469  CTTRQGKPPPDPLPPRFRSDLKCDFHQGALGHDVEGCYALKYIVKKLIDQGKLTFENNVP 528
            CT      PP  LPP + ++++CDFH GA GH  E C AL++ V+ LID   + F   VP
Sbjct: 435  CTMA----PPTVLPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDANAINFAP-VP 489

Query: 529  HVLDNPLPNHAA--VNMIEVCEEAPRLD-VRNVVTPLVPLHIKLCKASLFSHDHAKCLGC 585
            +V++NP+P H    VN IE  E    +D V +V T L+ +  +L    ++S     CLGC
Sbjct: 490  NVVNNPMPQHGGHRVNNIEGKEAEDLVDNVDDVQTSLLVVKSRLLNEGVYSGCDEDCLGC 549

Query: 586  LRDPLGCHAVQDDIQSSMNDNLL----------TVSDVCVVVPVF--HDPPVKSVPLKKN 633
                 GC  ++  IQ  M++  L          TVS + +       H   V S P   N
Sbjct: 550  AESENGCDQLRAGIQGMMDEGCLQFSRAVKDRGTVSTITIYFKPSEGHGQRVVSAPAT-N 608

Query: 634  AEPLVIRLP------------GPIPYASDKAVPYKY-----------------NATIIEN 664
              P+ I +P            G     + +AVP+KY                 N T +  
Sbjct: 609  GTPVTIPVPVTISAPTTIVASGRRAVENSRAVPWKYDNAYRSNRRVESQTKPVNQTPVTI 668

Query: 665  GV--EVPLASFATVSNIAEGTSAALRSGKV-RPPLFQKKVATPITPPVEEATPTVVSPIA 721
            G+   VP      V N+  G     RSG++  P   +   A  +     +       P+ 
Sbjct: 669  GLANRVPATVGPAVDNVG-GPGGFTRSGRLFAPQPLRDNNAEALAKAKGKQAVVEEEPVQ 727

Query: 722  TDVNQPGKSIEDSNLDEILRIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVL 781
             +   P  S E  +++E +++IK+SDYKIVDQL QTPSKIS+LSLLL SEAHRN LLK+L
Sbjct: 728  KEA--PEGSFE-KDVEEFMKMIKKSDYKIVDQLNQTPSKISILSLLLCSEAHRNALLKML 784

Query: 782  EQAYVDHEVTVDRFGGIVGNITACNNLWFSEEELPEAGKGHNLALHISVNCKSDMISNVL 841
              AYV  E++V++  G++ N++  + + F+  +LP  G+ HN ALHI++ CK  ++S+VL
Sbjct: 785  NLAYVPQEISVNQLEGVMANVSTRHGVGFTNLDLPPEGRNHNKALHITMECKGAVLSHVL 844

Query: 842  VDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVT 901
            VDTGSSLNV+PK  L ++   G  L  S  +V+AFD S+++V GE+ LP+ IGPE F + 
Sbjct: 845  VDTGSSLNVLPKQILKKIDVEGFVLTPSDLIVRAFDRSKRSVCGEVTLPVKIGPEVFDII 904

Query: 902  FQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSC 961
            F VMDI  +YSCLLGRPWIH AGAV+STLHQKLK+V NG++VT+ GEE  LVS LSSF  
Sbjct: 905  FYVMDIQPAYSCLLGRPWIHAAGAVSSTLHQKLKYVWNGQIVTVCGEEEILVSHLSSFKY 964

Query: 962  IEA-GSAEGT---AFQGLTIEG---AESKEAGAAMASLKDAQRAIQEGQTAGWGKMIQLC 1014
            +E  G    T    F+ + +E    AE ++ G ++ S K A+  +  G+  GWGKM+ L 
Sbjct: 965  VEVDGEIHETLCQVFETVALEKVAYAEQRKPGVSITSYKQAKEVVDSGKAEGWGKMVDLP 1024

Query: 1015 ENKRKEGLGFSPSSRVSSG-----VFHSAGFVNAISEEATGSG-----------LRPIFV 1058
              + K G+G+ P     +G      F SAG +N     ATGS            +RP   
Sbjct: 1025 VKEDKFGVGYEPLQAEQNGQAGPSTFTSAGLMNHGDVSATGSEDCDSDCDLDNWVRPC-- 1082

Query: 1059 TPGGIATNWDAIDIPSIMHVSELNHNKPVEHSNPTVPPSFDFPVYEAEDEEGDD--IPYE 1116
             PGG   NW A ++  +  ++E +      + +      FD P+Y+AE+E  +D  +P E
Sbjct: 1083 APGGSINNWTAEEVVQVTLLTESDLMAFTMNGSVIAQYDFDNPIYQAEEESEEDCELPAE 1142

Query: 1117 ITRLLEQEKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAW 1176
            + RLL+QE++ IQPHQEE+E++N+GTE+  REIKIGA LE+ VK+++I++LREY +IFAW
Sbjct: 1143 LVRLLKQEERVIQPHQEELEVVNLGTEDATREIKIGAALEDSVKRRLIEMLREYVEIFAW 1202

Query: 1177 SYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYP 1236
            SY+DMPGLD  IV HR+P +  CP V+QKLRRT PDMA KIK EVQKQ DAGFL    YP
Sbjct: 1203 SYQDMPGLDTDIVVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQKQWDAGFLAVTSYP 1262

Query: 1237 EWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSG 1296
             W+ANIVPVPKKDGKVRMCVD+RDLN+ASPKD+FPLPHIDVLVDNTAQS VFSFMDGFSG
Sbjct: 1263 PWMANIVPVPKKDGKVRMCVDYRDLNRASPKDDFPLPHIDVLVDNTAQSSVFSFMDGFSG 1322

Query: 1297 YNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVD 1356
            YNQIKM+PED EKT+FITPWGTFCYKVMPFGL NAGATYQR MTTLFHDM+HKE+EVYVD
Sbjct: 1323 YNQIKMAPEDMEKTTFITPWGTFCYKVMPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVD 1382

Query: 1357 DMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDK 1416
            DMI KS  EE+H+  L K+F+RLRK+KLRLNPNKCTFGVRSGKLLGFIVS+KGIEVDP K
Sbjct: 1383 DMIAKSQTEEEHLVNLQKLFDRLRKFKLRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAK 1442

Query: 1417 VRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAF 1476
            V+AI+EMP P+TEKQVRGFLGRLNYI+RFISH+TATC PIFKLLRKNQ + WND+CQ+AF
Sbjct: 1443 VKAIQEMPEPKTEKQVRGFLGRLNYIARFISHLTATCEPIFKLLRKNQAIKWNDDCQKAF 1502

Query: 1477 DSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDC 1536
            D IK YL +PPIL+PPV GRPLIMYL+V + SMGCVLG+ DE+G+KEHAIYYLSKKFTDC
Sbjct: 1503 DKIKEYLQKPPILIPPVPGRPLIMYLSVTENSMGCVLGRHDESGRKEHAIYYLSKKFTDC 1562

Query: 1537 ETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLS 1596
            ETRY++LEKTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIFEK A+TG++ARWQM+L+
Sbjct: 1563 ETRYSLLEKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILT 1622

Query: 1597 EYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDP 1656
            EYDI + +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMYLK KDC EPL+ EGPDP
Sbjct: 1623 EYDIQYTSQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKMKDCKEPLVEEGPDP 1682

Query: 1657 NSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAID 1716
            + KW L+FDGAVN  G G+GAV+++P+G H+PF+AR+ F+ TNN AEYEACI GIEEAID
Sbjct: 1683 DDKWTLMFDGAVNMNGNGVGAVLINPKGAHMPFSARLTFDVTNNEAEYEACIMGIEEAID 1742

Query: 1717 MRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMA 1776
            +RIK LDI+GDSALV+NQ+ G+W T+   LIPYRDY RR+LT+F KV+L+H+PRDENQMA
Sbjct: 1743 LRIKTLDIFGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVKLYHVPRDENQMA 1802

Query: 1777 DALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDYRPWYYDIKQFL 1836
            DALATLSSM +VN WN VP + V RLERP++VFA   V       V+D +PWYYDIK FL
Sbjct: 1803 DALATLSSMIKVNWWNHVPHVAVNRLERPAYVFAAESV-------VIDEKPWYYDIKNFL 1855

Query: 1837 LSREYPPSASKQDKKTLRRLAGRFLLD-GDILYKRNYDMVLLRCVDEHEAEQLMHDVHDG 1895
             ++EYP  ASK DKKTLRRLAG F L+  D+LYKRN+DMVLLRC+D  EA+ LM +VH+G
Sbjct: 1856 KTQEYPEGASKNDKKTLRRLAGSFYLNQDDVLYKRNFDMVLLRCMDRPEADMLMQEVHEG 1915

Query: 1896 TFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSPW 1955
            +FGTHA GH M++KLLRAGYYWM ME DC++YARKCHKCQIYA+++HVPP  LNVM+SPW
Sbjct: 1916 SFGTHAGGHAMAKKLLRAGYYWMTMESDCFKYARKCHKCQIYADRVHVPPSPLNVMNSPW 1975

Query: 1956 PFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRY 2015
            PF+MWGIDMIG+IEP ASNGHRFILVAIDYFTKWVEAASY N+TKQVV +FIK  IICRY
Sbjct: 1976 PFAMWGIDMIGKIEPTASNGHRFILVAIDYFTKWVEAASYANITKQVVTRFIKKEIICRY 2035

Query: 2016 GVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIIQKMVT 2075
            GVP +IITDNG+NLNN +++ LC++FKIEHHNSSPYRP+MNGAVEAANKNIK+I++KMV 
Sbjct: 2036 GVPERIITDNGSNLNNKMMKELCKDFKIEHHNSSPYRPKMNGAVEAANKNIKKIVRKMVV 2095

Query: 2076 TYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAE 2135
            TYKDWHEMLP+ALHGYRT+VR+STGATP+SLVYGMEAVLP+EVEIPSLRV+++ KL EAE
Sbjct: 2096 TYKDWHEMLPFALHGYRTSVRTSTGATPYSLVYGMEAVLPVEVEIPSLRVLLDVKLDEAE 2155

Query: 2136 WCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRISQQPDP 2195
            W + R+++L+LIEE+R+  +  GQ YQ RMK AFD+KV PR +++G+LVLK  +    D 
Sbjct: 2156 WIRTRFNELSLIEERRLAVVCHGQLYQRRMKRAFDQKVRPRSYQIGDLVLKRILPPGTDN 2215

Query: 2196 RGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2242
            RGKWTPNYEGPYVVKK FSGGAL+LT MDG + P+PVN+D+VKKYFA
Sbjct: 2216 RGKWTPNYEGPYVVKKVFSGGALMLTTMDGEDFPSPVNSDVVKKYFA 2262


>UniRef100_Q6WAY7 Gag/pol polyprotein [Pisum sativum]
          Length = 1814

 Score = 1655 bits (4287), Expect = 0.0
 Identities = 912/1862 (48%), Positives = 1197/1862 (63%), Gaps = 134/1862 (7%)

Query: 7    QLRTELASLREELAKAHDAMTALLAAQEQPVPVVSTAANVTPTVTTDPRSIMPSGYPYG- 65
            Q++ ELA ++  +A+  + M  +   QE+   +V       P V   P    P G P   
Sbjct: 3    QVQAELAEMKANMAQFMNMMQGVAQGQEELRALVQRQEAAIPPVNHAP----PEGGPVNG 58

Query: 66   ------LPLYYTANTGAGTSGTTNNGPIPGANLTPVSTALTQAATTVTEPIVNAVPLFVH 119
                  +P+   A  G    G   NG        P++  +  A   V  P  N  P+   
Sbjct: 59   NNVAAAVPINNYA-VGDELGGIRINGQ-------PIAPDVANARA-VRAPARNPAPIVDR 109

Query: 120  ANAHHGSIATTGTMEERMEELAKE---LQREIKANR-GNGDSIKTQDLCLVSKVDVPKKF 175
                   ++    +  R++E  ++   L  +I+A    N       ++ LV  + +P KF
Sbjct: 110  QEDMFSLLSEDEDVLGRVDERDRKVDALAEKIRAMECQNSLGFDVTNMGLVEGLRIPYKF 169

Query: 176  KVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHYFQDSLMEDAAEWYTSLSKDDVH 235
            K P FDKYNG +CP+ H+  Y RK+  Y D++ + +++FQDSL   + +WY  L +D + 
Sbjct: 170  KAPSFDKYNGTSCPRTHVQAYYRKISAYTDDEKMWMYFFQDSLSGASLDWYMELKRDSIR 229

Query: 236  TFDELATAFRSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEEM 295
             + +L  AF   Y  N  + P+R  L+SL QK  ESF+EYAQRWR  AAR+ P + E E+
Sbjct: 230  CWKDLGEAFLRQYKHNMDMAPSRTQLQSLCQKSGESFKEYAQRWRELAARVQPPMLEREL 289

Query: 296  TQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESSVGASKRYGN 355
            T  F+ TL+  +++RM      +FS++V  G R E  ++ G I     ++   +SK+   
Sbjct: 290  TDMFIGTLQGVFMDRMGSCPFVSFSDVVICGERTESLIKTGKI----QDAGSSSSKKPFA 345

Query: 356  GHHKKKETEVGMVSAGAGQSIATVAPINTAQMPPSYPYMPYSQHSFFPPFYHQYPLPPGQ 415
            G  +++E E   V     Q+ +    +    +P                     P P  Q
Sbjct: 346  GAPRRREGETNAVQYRRDQNRSQRCQVAAVTIPA--------------------PQPRQQ 385

Query: 416  PQVPVNAIAQQIKQQLPVQQQQQQQQQQYTRPTFPPIPMLYAELLPTLLQRGHCTTRQGK 475
             Q  V    QQ +QQ P Q +Q+   ++     F  +PM YAELLP LL+ G    R   
Sbjct: 386  QQQRVQQPQQQQQQQRPYQPRQRMPDRR-----FDSLPMSYAELLPELLRLGMVELRT-M 439

Query: 476  PPPDPLPPRFRSDLKCDFHQGALGHDVEGCYALKYIVKKLIDQGKLTFENNVPHVLDNPL 535
             PP  LPP + ++++CDFH GA GH  E C AL++ V+ LID   + F   VP+V++NP+
Sbjct: 440  APPTVLPPGYDANVRCDFHSGAPGHHTEKCRALQHKVQDLIDAKAINFAP-VPNVVNNPM 498

Query: 536  PNHAA--VNMIEVCE-EAPRLDVRNVVTPLVPLHIKLCKASLFSHDHAKCLGCLRDPLGC 592
            P H    VN IE  E E   ++V +V T L+ +  +L    ++S     CLGC     GC
Sbjct: 499  PQHGGHRVNNIEGKEAEDLVVNVDDVQTSLLVVKGRLLNGGVYSGCDEDCLGCAESENGC 558

Query: 593  HAVQDDIQSSMNDNLL----------TVSDVCVV-------------VPVFHDPPVK-SV 628
              ++  IQ  M++  L          TVS + +               P  +  PV  SV
Sbjct: 559  DQLRTGIQGMMDEGCLQFSRAVKDRGTVSTITIYFKPSEGRGQRVVSAPATNGTPVTISV 618

Query: 629  PLKKNAEPLVIRLPGPIPYASDKAVPYKYNATIIEN-----------------GV--EVP 669
            P+  +A P  I   G     + +AVP+KY+     N                 G+   VP
Sbjct: 619  PVTISA-PTTIAASGRRAVENSRAVPWKYDNAYRSNRRAESQTRPVNQAPVTIGLPNRVP 677

Query: 670  LASFATVSNIAEGTSAALRSGKV-RPPLFQKKVATPITPPVEEATPTVVSPIATDVNQPG 728
                  V N+  G     RSG++  P   +   A  +     +       P+  +   P 
Sbjct: 678  ATVGPAVDNVG-GPGGFTRSGRLFAPQPLRDNNAEALAKAKGKQAVVEEEPVQKEA--PE 734

Query: 729  KSIEDSNLDEILRIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVLEQAYVDH 788
             S E  +++E ++IIK+SDYKIVDQL QTPSKIS+LSLLL SEAHRN LLK+L  AYV  
Sbjct: 735  GSFE-KDVEEFMKIIKKSDYKIVDQLNQTPSKISILSLLLCSEAHRNALLKMLNLAYVPQ 793

Query: 789  EVTVDRFGGIVGNITACNNLWFSEEELPEAGKGHNLALHISVNCKSDMISNVLVDTGSSL 848
            E++V++  G++ N++  + + F+  +L   G+ HN ALHI++ CK  ++S+VLVDTGSSL
Sbjct: 794  EISVNQLEGVMANVSTRHGVGFTNLDLTPEGRNHNKALHITMECKGAVLSHVLVDTGSSL 853

Query: 849  NVMPKTTLDQLSYRGTPLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDIN 908
            NV+PK  L ++   G  L  S  +V+AFDGS+++V GE+ LP+ IGPE F + F VMDI 
Sbjct: 854  NVLPKQILKKIDVEGFVLTPSDLIVRAFDGSKRSVCGEVTLPVKIGPEVFDIIFYVMDIQ 913

Query: 909  ASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSCIEA-GSA 967
             +YSCLLGRPWIH AGAV+STLHQKLK+V NG++VT+ GEE  LVS LSSF  +E  G  
Sbjct: 914  PAYSCLLGRPWIHAAGAVSSTLHQKLKYVWNGQIVTVCGEEEILVSHLSSFKYVEVDGEI 973

Query: 968  EGT---AFQGLTIEG---AESKEAGAAMASLKDAQRAIQEGQTAGWGKMIQLCENKRKEG 1021
              T   AF+ + +E    AE ++ GA++ S K A+  +  G+  GWGKM+ L   + K G
Sbjct: 974  HETLCQAFETVALEKVAYAEQRKPGASITSYKQAKEVVDSGKAEGWGKMVYLPVKEDKFG 1033

Query: 1022 LGFSPSSRVSSG-----VFHSAGFVNAISEEATGSG-----------LRPIFVTPGGIAT 1065
            +G+ P     +G      F SAG +N     ATGS            +RP    PGG   
Sbjct: 1034 VGYEPLQAEQNGQAGPSTFTSAGLMNHGDVSATGSEDCDSDCDLDNWVRPC--APGGSIN 1091

Query: 1066 NWDAIDIPSIMHVSELNHNKPVEHSNPTVPPSFDFPVYEAEDEEGDD--IPYEITRLLEQ 1123
            NW A ++  +  ++E +      +++      F  P+Y+AE+E  +D  +P E+ RLL Q
Sbjct: 1092 NWTAEEVVQVTLLTESDLMAFTMNNSVMAQYDFGNPIYQAEEESEEDCELPAELVRLLRQ 1151

Query: 1124 EKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPG 1183
            E++ IQPHQEE+E++N+GTE+ KREIKIGA LE+ VK+++I++LREY +IFAWSY+DMPG
Sbjct: 1152 EERVIQPHQEELEVVNLGTEDAKREIKIGAALEDSVKRRLIEMLREYVEIFAWSYQDMPG 1211

Query: 1184 LDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIV 1243
            LD  IV HR+P +  CP V+QKLRRT PDMA KIK EVQKQ DAGFL    YP WVANIV
Sbjct: 1212 LDTDIVVHRLPLREGCPSVKQKLRRTSPDMATKIKEEVQKQWDAGFLAVTSYPPWVANIV 1271

Query: 1244 PVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMS 1303
            PVPKKDGKVRMCVD+RDLN+ASPKD+FPLPHIDVLVDNTAQS VFSFMDGFSGYNQIKM+
Sbjct: 1272 PVPKKDGKVRMCVDYRDLNRASPKDDFPLPHIDVLVDNTAQSSVFSFMDGFSGYNQIKMA 1331

Query: 1304 PEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSA 1363
            PED EKT+FITPWGTF YKVMPFGL NAGATYQR MTTLFHDM+HKE+EVYVDDMI KS 
Sbjct: 1332 PEDMEKTTFITPWGTFYYKVMPFGLKNAGATYQRAMTTLFHDMMHKEIEVYVDDMIAKSQ 1391

Query: 1364 DEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREM 1423
             EE+H+  L K+F+RLRK+KLRLNPNKCTFGVRSGKLLGFIVS+KGIEVDP KV+AI+EM
Sbjct: 1392 TEEEHLVNLQKLFDRLRKFKLRLNPNKCTFGVRSGKLLGFIVSEKGIEVDPAKVKAIQEM 1451

Query: 1424 PAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYL 1483
            P P+TEKQVRGFLGRLNYI+RFISH+TATC PIFKLLRKNQ + WND+CQ+AFD IK YL
Sbjct: 1452 PEPKTEKQVRGFLGRLNYIARFISHLTATCEPIFKLLRKNQAIKWNDDCQKAFDKIKEYL 1511

Query: 1484 LEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTML 1543
             +PPIL PPV GRPLIMYL+V + SMGCVLGQ DE+G+KEHAIYYLSKKFTDCETRY++L
Sbjct: 1512 QKPPILTPPVPGRPLIMYLSVTENSMGCVLGQHDESGRKEHAIYYLSKKFTDCETRYSLL 1571

Query: 1544 EKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFK 1603
            EKTCCALAWAA+RLR Y++NHTT LIS+MDP+KYIFEK A+TG++ARWQM+L+EYDI + 
Sbjct: 1572 EKTCCALAWAARRLRQYMLNHTTLLISKMDPVKYIFEKPALTGRVARWQMILTEYDIQYT 1631

Query: 1604 TQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDPNSKWGLV 1663
            +QKAIKGSIL+D+LA QP++DYQP+ F+FPDE+IMYLK KDC+EPL+ EGPDP+ KW L+
Sbjct: 1632 SQKAIKGSILSDYLAEQPIEDYQPMMFEFPDEDIMYLKVKDCEEPLVEEGPDPDDKWTLM 1691

Query: 1664 FDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLD 1723
            FDGAVN  G G+GAV+++P+G HIPF+AR+ F+ TNN AEYEACI GIEEAID+RIK LD
Sbjct: 1692 FDGAVNMNGNGVGAVLINPKGAHIPFSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLD 1751

Query: 1724 IYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLS 1783
            IYGDSALV+NQ+ G+W T+   LIPYRDY RR+LT+F KV L+H+PRDENQMADALATLS
Sbjct: 1752 IYGDSALVVNQVNGDWNTNQPHLIPYRDYTRRILTFFKKVRLYHVPRDENQMADALATLS 1811

Query: 1784 SM 1785
            SM
Sbjct: 1812 SM 1813


>UniRef100_Q9FE41 Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0433F09 [Oryza sativa]
          Length = 2876

 Score =  905 bits (2339), Expect = 0.0
 Identities = 481/1140 (42%), Positives = 685/1140 (59%), Gaps = 37/1140 (3%)

Query: 1116 EITRLLEQEKKAIQPHQEEIELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFA 1175
            ++   L+Q     QP  +E+  +N+GTE++ R I +   L E  ++     L E+ D FA
Sbjct: 1759 DVAGALKQLDDGGQPTIDELVEMNLGTEDDPRPIFVSGMLTEEEREDYRSFLMEFRDCFA 1818

Query: 1176 WSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEY 1235
            W+Y++MPGLD  +  H++   P+  PV+Q  RR  P+   ++  EV + I+ GF+  ++Y
Sbjct: 1819 WTYKEMPGLDSRVATHKLAIDPQFRPVKQPPRRLRPEFQDQVIAEVDRLINVGFIKEIQY 1878

Query: 1236 PEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFS 1295
            P W+ANIVPV KK+G+VR+CVDFRDLN+A PKD+FPLP  +++VD+T            S
Sbjct: 1879 PRWLANIVPVEKKNGQVRVCVDFRDLNRACPKDDFPLPITEMVVDSTTG------YGALS 1932

Query: 1296 GYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYV 1355
            GYNQIKM   D   T+F TP G F Y VMPFGL NAGATYQR M  +  D+IH  VE YV
Sbjct: 1933 GYNQIKMDLLDAFDTAFRTPKGNFYYTVMPFGLKNAGATYQRAMQFVLDDLIHHSVECYV 1992

Query: 1356 DDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPD 1415
            DDM+VK+ D E H E L  +FERLR+++L++NP KC F V+SG  LGF++  +GIE++P 
Sbjct: 1993 DDMVVKTKDHEHHQEDLRIVFERLRRHQLKMNPLKCAFAVQSGVFLGFVIRHRGIEIEPK 2052

Query: 1416 KVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEA 1475
            K++AI  MP PQ  K +R   G+L YI RFIS+++    P  KL++K  P VW++ECQ  
Sbjct: 2053 KIKAILNMPPPQELKDLRKLQGKLAYIRRFISNLSGRIQPFSKLMKKGTPFVWDEECQNG 2112

Query: 1476 FDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTD 1535
            FDSIK YLL PP+L  PV+GRPLI+Y+A    S+G +L Q ++ G KE A YYLS+    
Sbjct: 2113 FDSIKRYLLNPPVLAAPVKGRPLILYIATQPASIGALLAQHNDEG-KEVACYYLSRTMVG 2171

Query: 1536 CETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLL 1595
             E  Y+ +EK C AL +A K+LRHY++ H   LI+R DPI+Y+  +  +TG++ +W +L+
Sbjct: 2172 AEQNYSPIEKLCLALIFALKKLRHYMLAHQIQLIARADPIRYVLSQPVLTGRLGKWALLM 2231

Query: 1596 SEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPD 1655
             EYDI F  QKAIKG  LA+ LA  P+ D  P+  + PDEEI   + ++           
Sbjct: 2232 MEYDITFVPQKAIKGQALAEFLATHPMPDDSPLIANLPDEEIFTAELQE----------- 2280

Query: 1656 PNSKWGLVFDGA----VNAYG-----KGIGAVIVSPQGHHIPFTARIL-FECTNNMAEYE 1705
               +W L FDGA    +N  G      G G V  +PQG  I  +  +L  EC+NN AEYE
Sbjct: 2281 ---QWELYFDGASRKDINPDGTPRRRAGAGLVFKTPQGGVIYHSFSLLKEECSNNEAEYE 2337

Query: 1706 ACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVEL 1765
            A IFG+  A+ M ++ L  +GDS L+I QI   +E    +L+PY   ARRL+  F  +E+
Sbjct: 2338 ALIFGLLLALSMEVRSLRAHGDSRLIIRQINNIYEVRKPELVPYYTVARRLMDKFEHIEV 2397

Query: 1766 HHIPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDY 1825
             H+PR +N  ADALA L++       N   ++  +R   P+ +  I + ++    N  + 
Sbjct: 2398 IHVPRSKNAPADALAKLAAALVFQGDNPAQIVVEERWLLPAVLELIPEEVNIIITNSAEE 2457

Query: 1826 RPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGRFLLDGDILYKRNYDM-VLLRCVDEHE 1884
              W      +      P      +++ L+R    ++    +LYKR+Y   VLLRCVD  E
Sbjct: 2458 EDWRQPFLDYFKHGSLP--EDPVERRQLQRRLPSYIYKAGVLYKRSYGQEVLLRCVDRSE 2515

Query: 1885 AEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVP 1944
            A +++ +VH G  G H +G  M   +   GYYW  +  DC + A+ CH CQI+ N  H P
Sbjct: 2516 ANRVLQEVHHGVCGGHQSGPKMYHSIRLVGYYWPGIMADCLKTAKTCHGCQIHDNFKHQP 2575

Query: 1945 PHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVA 2004
            P  L+     WPF  WGID+IG I P +S GHRFIL A DYF+KW EA     V    V 
Sbjct: 2576 PAPLHPTVPSWPFDAWGIDVIGLINPPSSRGHRFILTATDYFSKWAEAVPLREVKSSDVI 2635

Query: 2005 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 2064
             F++ +II R+GVP +I +DN     +  +    E++KI+ + S+ Y PQ NG  EA NK
Sbjct: 2636 NFLERHIIYRFGVPHRITSDNAKAFKSQKIYRFMEKYKIKWNYSTGYYPQANGMAEAFNK 2695

Query: 2065 NIKRIIQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2123
             + +I++K V  + +DWH+ L  AL  YR TVR+ T ATP+SLVYG EAVLPLE+++PSL
Sbjct: 2696 TLGKILKKTVDKHRRDWHDRLYEALWAYRVTVRTPTQATPYSLVYGNEAVLPLEIQLPSL 2755

Query: 2124 RVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGEL 2183
            RV +  +L++ E  + R+ +L+ +EE+R+ A+   + Y+  M  A+DK V  R F+ GEL
Sbjct: 2756 RVAIHDELTKDEQIRLRFQELDAVEEERLGALQNLELYRQNMVRAYDKLVKQRVFRKGEL 2815

Query: 2184 VLKGR--ISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2241
            VL  R  I      +GK+ P +EGPYV+++A+ GGA  L    G +   P+N   +KKYF
Sbjct: 2816 VLVLRRPIVVTHKMKGKFEPKWEGPYVIEQAYDGGAYQLIDHQGSQPMPPINGRFLKKYF 2875



 Score =  116 bits (290), Expect = 9e-24
 Identities = 85/288 (29%), Positives = 136/288 (46%), Gaps = 21/288 (7%)

Query: 681  EGTSAALRSGKVRPPLFQKKVATPITPPVEEATPTVVSPIATDVNQPGKSIEDSNLDEIL 740
            E  + +LR GK  P   + KV   +  P ++A+P   +P A +     K           
Sbjct: 1252 EEVNISLRGGKTLPDPHKSKVPN-VDKPAKKASPPGEAPEAPETKTGSKEKP-------- 1302

Query: 741  RIIKRSDYKIVDQLLQTPSKISVLSLLLSSEAHRNTLLKVLEQAYVDHEVTVDRFGGIVG 800
                  DYK++  L + P+ +SV   L+     R  L+K L+   V +EV + +   +  
Sbjct: 1303 ----AVDYKVLAHLKRIPALLSVYDALMMVPDLREALIKALQAPEV-YEVDMAKHR-LYD 1356

Query: 801  NITACNNLWFSEEELPEAGKGHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLS 860
            N    N + F++E+    G  HN  L+I  N  S  +  +L+D GS++N++P  +L +  
Sbjct: 1357 NPLFVNEITFADEDNIIKGGDHNRPLYIEGNIGSAHLRRILIDLGSAVNILPVRSLTRAG 1416

Query: 861  YRGTPLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWI 920
            +    L     ++  FD   K  LG I + I +   +F V F V++ N SYS LLGRPWI
Sbjct: 1417 FTTKDLEPIDVVICGFDNQGKPTLGAITIKIQMSTFSFKVRFFVIEANTSYSALLGRPWI 1476

Query: 921  HDAGAVTSTLHQKLKFVKNGKLVTIHGEEAYLVSQLSSFSCIEAGSAE 968
            H    V STLHQ LKF+        +G +  + S  S ++  E+  A+
Sbjct: 1477 HKYRVVPSTLHQCLKFLDG------NGVQQRITSNFSPYTIQESYHAD 1518


>UniRef100_Q6L974 GAG-POL [Vitis vinifera]
          Length = 1027

 Score =  765 bits (1976), Expect = 0.0
 Identities = 417/1063 (39%), Positives = 614/1063 (57%), Gaps = 39/1063 (3%)

Query: 1181 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVA 1240
            M G+ P I  HR+       PVRQ++RR HPD    I+NE+ K ++AGF+  V YP+W+A
Sbjct: 1    MKGIHPSITSHRLNVVSTARPVRQRIRRFHPDRQRVIRNEIDKLLEAGFIREVSYPDWLA 60

Query: 1241 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1300
            N+V VPKK+GK R+CVD+ +LN A PKD+FPLP ID +VD+T+   + SF+D FSGY+QI
Sbjct: 61   NVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLPRIDQIVDSTSGQGMLSFLDAFSGYHQI 120

Query: 1301 KMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIV 1360
             MSP+D EK +FITP   +CYKVMPFGL NAGATYQR MT +F  +I   VEVY+DD++V
Sbjct: 121  PMSPDDEEKIAFITPHDLYCYKVMPFGLKNAGATYQRLMTKIFKPLIGHSVEVYIDDIVV 180

Query: 1361 KSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAI 1420
            KS   EQH+ +L ++F  LR+Y ++LNP+KC FGV + K LGF+VSQ+GIEV PD+V+A+
Sbjct: 181  KSKTREQHILHLQEVFYLLRRYGMKLNPSKCAFGVSARKFLGFMVSQRGIEVSPDQVKAV 240

Query: 1421 REMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIK 1480
             E P P+ +K+++   G+L  + RFI+       P F  +RK     W D CQ A + IK
Sbjct: 241  METPPPRNKKELQRLTGKLVALGRFIARFIDELRPFFLAIRKAGTHGWTDNCQNALERIK 300

Query: 1481 NYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRY 1540
            +YL++PPIL  P+    L MYLAV + ++  VL  +  + K++  IYY+S+   D ETRY
Sbjct: 301  HYLMQPPILSSPIPKEKLYMYLAVSEWAISAVL-FRCPSPKEQKPIYYVSRALADVETRY 359

Query: 1541 TMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDI 1600
            + +E    AL  AA++LR Y   H   ++    P++ I  K  +TG++ +W + LSE+ I
Sbjct: 360  SKMELISLALRSAAQKLRPYFQAHPV-IVLTDQPLRNILHKPDLTGRMLQWAIELSEFGI 418

Query: 1601 VFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDPNSKW 1660
             F+ + ++KG ++AD +          +E+                +P  +EG      W
Sbjct: 419  EFQPRLSMKGQVMADFV----------LEYS--------------RKPGQHEGSRKKEWW 454

Query: 1661 GLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIK 1720
             L  DGA  + G G+G ++ SP G H+    R+ F  +NN AEYEA + G++ A+ + + 
Sbjct: 455  TLRVDGASRSSGSGVGLLLQSPTGEHLEQAIRLGFSASNNEAEYEAILSGLDLALALSVS 514

Query: 1721 HLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALA 1780
             L I+ DS LV+  ++ E+E   A++  Y    R  L  FT+  +  I R +N+ ADALA
Sbjct: 515  KLRIFSDSQLVVKHVQEEYEAKDARMARYLAKVRNTLQQFTEWTIEKIKRADNRRADALA 574

Query: 1781 TLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDYRPWYYDIKQFLLSRE 1840
             +++   +     +P I VQ     S +     +         D + W  DI +++ +  
Sbjct: 575  GIAASLSIKEAILLP-IHVQTNPSVSEI----SICSTTEAPQADDQEWMNDITEYIRTGT 629

Query: 1841 YPPSASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTH 1900
             P    +  K  +R  A RF L G  LYKR++    LRC+   EA+ ++ ++H+G +G H
Sbjct: 630  LPGDPKQAHK--VRVQAARFTLIGGHLYKRSFTGPYLRCLGHSEAQYVLAELHEGIYGNH 687

Query: 1901 ATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSPWPFSMW 1960
            + G +++ +    GYYW  M+ +   Y ++C KCQ YA   H+P   L  +S PWPF+ W
Sbjct: 688  SGGRSLAHRAHSQGYYWPTMKKEAAAYVKRCDKCQRYAPIPHMPSTTLKSISGPWPFAQW 747

Query: 1961 GIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSK 2020
            G+D++ R  P A    +F+LVA DYF+KWVEA +Y +   + V KF+  NIICR+G+P  
Sbjct: 748  GMDIV-RPLPTAPAQKKFLLVATDYFSKWVEAEAYASTKDKDVTKFVWKNIICRFGIPQT 806

Query: 2021 IITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIIQKMVTTYK-D 2079
            II DNG   ++   +  C E  I +  S+P  PQ NG  EA NK +   ++K +   K  
Sbjct: 807  IIADNGPQFDSIAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLITALKKRLEQAKGK 866

Query: 2080 WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQN 2139
            W E LP  L  YRTT    TG TPF+L YGM+AV+P+E+ +P++     AK S+A     
Sbjct: 867  WVEELPGVLWAYRTTPGRPTGNTPFALAYGMDAVIPIEIGLPTIWT-NAAKQSDANMQLG 925

Query: 2140 RYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRISQQPD-PRGK 2198
            R   L+  +E R  A  R   YQ R    +++KV PR  K G LVL+       +   GK
Sbjct: 926  R--NLDWTDEVRESASIRMADYQQRASAHYNRKVRPRSLKNGTLVLRKFFENTTEVGAGK 983

Query: 2199 WTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2241
            +  N+EGPY+V KA   GA  L  +DG  L  P N   +K+Y+
Sbjct: 984  FQANWEGPYIVSKASDNGAYHLQKLDGTPLLRPWNVSNLKQYY 1026


>UniRef100_Q9LMV1 F5M15.26 [Arabidopsis thaliana]
          Length = 1838

 Score =  763 bits (1971), Expect = 0.0
 Identities = 432/1117 (38%), Positives = 633/1117 (55%), Gaps = 49/1117 (4%)

Query: 1136 ELINIGTEENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPT 1195
            E++NI   +  R + +GA +   ++ ++I LL+     FAWS EDM G+DP I  H +  
Sbjct: 759  EMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNV 818

Query: 1196 KPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMC 1255
             P   PV+QK R+  P+ A  +  EV+K + AG ++ V+YPEW+AN V V KK+GK R+C
Sbjct: 819  DPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVC 878

Query: 1256 VDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITP 1315
            VD+ DLNKA PKD++PLPHID LV+ T+ + + SFMD FSGYNQI M  +D+EKTSF+T 
Sbjct: 879  VDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTD 938

Query: 1316 WGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKM 1375
             GT+CYKVM FGL NAGATYQR +  +  D I + VEVY+DDM+VKS   E HVE+L+K 
Sbjct: 939  RGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKC 998

Query: 1376 FERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGF 1435
            F+ L  Y ++LNP KCTFGV SG+ LG++V+++GIE +P ++RAI E+P+P+  ++V+  
Sbjct: 999  FDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRL 1058

Query: 1436 LGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEG 1495
             GR+  ++RFIS  T  C P + LL++     W+ + +EAF+ +K+YL  PPILV P  G
Sbjct: 1059 TGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVG 1118

Query: 1496 RPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAK 1555
              L +Y+AV D ++  VL ++D    ++  I+Y SK   + ETRY ++EK   A+  +A+
Sbjct: 1119 ETLYLYIAVSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSAR 1176

Query: 1556 RLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILAD 1615
            +LR Y  +HT  +++   P++      + +G++ +W + LSEYDI F+ + A+K  +LAD
Sbjct: 1177 KLRPYFQSHTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLAD 1235

Query: 1616 HLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDPNSKWGLVFDGAVNAYGKGI 1675
             L   PL   +        EE                       W L  DG+ +A G GI
Sbjct: 1236 FLIELPLQSAERAVSGNRGEE-----------------------WSLYVDGSSSARGSGI 1272

Query: 1676 GAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQI 1735
            G  +VSP    +  + R+ F  TNN+AEYE  I G+  A  M+I  +  + DS L+  Q+
Sbjct: 1273 GIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQL 1332

Query: 1736 KGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDV- 1794
             GE+E  + K+  Y    + +   F   +L  IPR +N  ADALA L+    +   +D+ 
Sbjct: 1333 SGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALA----LTSDSDLR 1388

Query: 1795 PLIKVQRLERPS-----HVFAIGDVIDQAGENVVDYRPWYYDIKQFLLSREYPPSASKQD 1849
             +I V+ +++PS      V  +  +      +  D   W  +I+ +L     P      D
Sbjct: 1389 RIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYLSDGTLP-----SD 1443

Query: 1850 KKTLRRL---AGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTM 1906
            K T RRL   A ++ L  + L K +    +L C+   E  ++M + H+G  G H+ G  +
Sbjct: 1444 KWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRAL 1503

Query: 1907 SRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSPWPFSMWGIDMIG 1966
            + KL + G+YW  M  DC  +  KC +CQ +A  IH P   L    +P+PF  W +D++G
Sbjct: 1504 ALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVG 1563

Query: 1967 RIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNG 2026
             +   AS   RFILV  DYFTKWVEA SY  +    V  F+   IICR+G+P +IITDNG
Sbjct: 1564 PM--PASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYEIITDNG 1621

Query: 2027 TNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIIQKMVTTYKD-WHEMLP 2085
            +   +   +  C  +KI  + S+P  PQ NG  EA NK I   ++K +   K  W + L 
Sbjct: 1622 SQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELD 1681

Query: 2086 YALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLN 2145
              L  YRTT RS+T  TPF+  YGMEA+ P EV   SLR  M  K  E    +   D+L+
Sbjct: 1682 GVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLD 1740

Query: 2146 LIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRISQQPD-PRGKWTPNYE 2204
             +EE R  A+ R Q+YQ      +++KVH R F VG+LVL+       +   GK   N+E
Sbjct: 1741 DLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWE 1800

Query: 2205 GPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2241
            G Y V K    G   L  M G  +P   N+  +K+Y+
Sbjct: 1801 GSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1837



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 7/176 (3%)

Query: 810 FSEEELPEAGKGHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRS 869
           F++ +L      HN  L + +      ++ VL+DTGSS++++ K  L  ++     ++  
Sbjct: 602 FTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIKPV 661

Query: 870 TFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTST 929
           +  +  FDG     +G I LPI +G     V F V+   A Y+ +LG PWIH   A+ ST
Sbjct: 662 SKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIPST 721

Query: 930 LHQKLKFVKNGKLVTIHG-------EEAYLVSQLSSFSCIEAGSAEGTAFQGLTIE 978
            HQ +KF  +  + T+           +Y  S+L     +    ++ T   G+  E
Sbjct: 722 YHQCVKFPTHNGIFTLRAPKEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAE 777



 Score = 44.3 bits (103), Expect = 0.044
 Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 4/172 (2%)

Query: 179 EFDKYNGLTCPQNHIVKY---VRKMGNYKDN-DSLMIHYFQDSLMEDAAEWYTSLSKDDV 234
           + + YNG   P+  +  +   + +     DN D+     F + L   A  W++ L  + +
Sbjct: 220 KLESYNGRNDPKEFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAHNWFSRLKPNSI 279

Query: 235 HTFDELATAFRSHYGFNTRLKPNREFLRSLSQKKEESFREYAQRWRGAAARITPALDEEE 294
            +F +L ++F  HY      + +   L S+SQ  +ES R +  R++     IT   +   
Sbjct: 280 DSFHQLTSSFLKHYAPLIENQTSNADLWSISQGAKESLRSFVDRFKLVVTNITVPDEAAI 339

Query: 295 MTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS 346
           +           + + + + AP+   + +   +R  E   + +I+  K  S+
Sbjct: 340 VALRNAVWYDSRFRDDITLHAPSTLEDALHRASRFIELEEEKLILARKHNST 391


>UniRef100_Q94LN5 Putative retroelement pol polyprotein [Oryza sativa]
          Length = 1580

 Score =  752 bits (1941), Expect = 0.0
 Identities = 424/1105 (38%), Positives = 633/1105 (56%), Gaps = 66/1105 (5%)

Query: 1144 ENKREIKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVR 1203
            ++  EI I   + +G +  +I+LL+E+ D F W Y +MPG    IVEHR+P KP   P +
Sbjct: 528  DDLEEIDISPAIGQG-RHLLIELLKEFRDCFTWEYYEMPGHSRSIVEHRLPLKPGVRPHQ 586

Query: 1204 QKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNK 1263
            Q  RR   DM   +K E+++  DAGF+    Y EWV++IVPV KK+GKVR+C+DFR LNK
Sbjct: 587  QLPRRCKADMLEPVKAEIKRLYDAGFIRPCRYAEWVSSIVPVIKKNGKVRVCIDFRYLNK 646

Query: 1264 ASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPW--GTFCY 1321
            A+PKD +P+   D LVD  +  K+ SFMDG +GYNQI M+ ED  KT+F  P   G F +
Sbjct: 647  ATPKDEYPMLVADQLVDAASGHKILSFMDGNAGYNQIFMAEEDIHKTTFRCPGAIGLFEW 706

Query: 1322 KVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRK 1381
             V+ F L +AGATYQR M  ++HD+I   VEVY+DD++VKS + E H+  L K+FER RK
Sbjct: 707  VVITFVLKSAGATYQRAMNYIYHDLIGWLVEVYIDDVVVKSKEIEDHIADLRKVFERTRK 766

Query: 1382 YKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNY 1441
            Y L++NP KC FGV +G+ LGF+V ++GIEV    + AI+++  P+ + +++  +G++N+
Sbjct: 767  YGLKMNPTKCAFGVSAGQFLGFLVHERGIEVTQRSINAIKKIKPPEDKTELQEMIGKINF 826

Query: 1442 ISRFISHMTATCGPIFKLLR--KNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLI 1499
            + RFIS ++    P   LLR   +Q   W  E Q+A D+IK YL  PP+L+PP +G P  
Sbjct: 827  VRRFISILSGKLEPFTPLLRLKADQQFAWGAEQQKALDNIKEYLSSPPVLIPPQKGIPFR 886

Query: 1500 MYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRH 1559
            +YL+  D+S+  VL Q+ E  +KE  ++YLS++  + ETRY+ +EK C  L ++  RLRH
Sbjct: 887  LYLSAGDKSISSVLIQELE--RKERVVFYLSRRLLNAETRYSPVEKLCLCLYFSCTRLRH 944

Query: 1560 YLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAY 1619
            YL+++   +I + D +KY+     + G+I +W   L+E+D+ +++ KAIKG  +A+ +  
Sbjct: 945  YLLSNECTVICKADVVKYMLSAPILKGRIGKWIFSLTEFDLRYESPKAIKGQAIANFIV- 1003

Query: 1620 QPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVI 1679
                       D+ D+ I               G      W L FDG+V  +G GIG VI
Sbjct: 1004 -----------DYRDDSI---------------GSVEVVPWTLFFDGSVCTHGCGIGLVI 1037

Query: 1680 VSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEW 1739
            +SP+G    F   I    TNN AEYEA + G++   ++    ++I GDS LVI+Q+ GE+
Sbjct: 1038 ISPRGACFEFAYTIKPYATNNQAEYEAVLKGLQLLKEVEADTIEIMGDSLLVISQLAGEY 1097

Query: 1740 ETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPLIKV 1799
            E  +  LI Y +  + L+  F  V L H+ R++N  A+ LA  +S +++       +IK 
Sbjct: 1098 ECKNDTLIVYNEKCQELMREFRLVTLKHVSREQNIEANDLAQGASGYKL-------MIKH 1150

Query: 1800 QRLERPSHVFAIGDVIDQAGENVVDYRPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGR 1859
             ++E                  V+    W Y + Q+L      PS S   K  LR  A +
Sbjct: 1151 VQIEVA----------------VITADDWRYYVYQYLQD----PSQSASRK--LRYKALK 1188

Query: 1860 FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMA 1919
            ++L  D LY R  D VLL+C+   +A+  + +VH+G  GTH + H M   L  AGY+W  
Sbjct: 1189 YILLDDELYYRTIDGVLLKCLSTDQAKVAIGEVHEGICGTHQSAHKMKWLLRCAGYFWPT 1248

Query: 1920 MEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFI 1979
            M  DC++Y + C  CQ +      P  A+N +  PWPF  WGIDMIG I P +S GH+FI
Sbjct: 1249 MLEDCFRYYKGCQDCQKFGAIQRAPASAMNPIIKPWPFRGWGIDMIGMINPPSSKGHKFI 1308

Query: 1980 LVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCE 2039
            LVA DYFTKWVEA     V      +F++ +II R G+P  I TD G+   ++      +
Sbjct: 1309 LVATDYFTKWVEAIPLKKVDSGDAIQFVQEHIIYRVGIPQTITTDQGSIFVSDEFIQFAD 1368

Query: 2040 EFKIEHHNSSPYRPQMNGAVEAANKNIKRIIQKMVTTY-KDWHEMLPYALHGYRTTVRSS 2098
               I+  NSSPY  Q NG  EA+NK++ ++I++ ++ Y + WH  L  AL  YR     S
Sbjct: 1369 SMGIKLLNSSPYYAQANGQAEASNKSLIKLIKRKISDYPRQWHTRLAEALWSYRMACHGS 1428

Query: 2099 TGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARG 2158
                P+ LVY  +A+LP EV I S R  ++  L+  E+     D+   + + R+ A+A+ 
Sbjct: 1429 IQVPPYKLVYRHKAILPWEVRIGSRRTELQNDLTADEYSNLMADEREDLVQSRLRALAKV 1488

Query: 2159 QSYQARMKTAFDKKVHPREFKVGELVLK--GRISQQPDPRGKWTPNYEGPYVVKKAFSGG 2216
               + R+   ++KKV P++F  GEL+ K    I  +    GKW+PN+EGP+ + K  S G
Sbjct: 1489 IKDKERVTRHYNKKVVPKDFSEGELIWKLILPIGTRDSKFGKWSPNWEGPFQIHKVVSKG 1548

Query: 2217 ALILTHMDGVELPNPVNADIVKKYF 2241
            A +L  +DG      +N   +KKY+
Sbjct: 1549 AYMLQGLDGEVYDRALNGKYLKKYY 1573



 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 50/179 (27%), Positives = 89/179 (48%), Gaps = 3/179 (1%)

Query: 814 ELPEAGKGHNLA-LHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFL 872
           E PE  +  +L  L+I+       +S ++VD G+++N+MP  T  +L      L ++  +
Sbjct: 351 EKPEGTENRHLKPLYINGYVNGKPMSKMMVDGGAAVNLMPYATFRKLGRNAEDLIKTNMV 410

Query: 873 VKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQ 932
           +K F G+    +G +++ +T+G +    TF V+D   SYS LLGR WIH    + ST+HQ
Sbjct: 411 LKDFGGNPSETMGVLNVELTVGSKTIPTTFFVIDGKGSYSLLLGRDWIHANCCIPSTIHQ 470

Query: 933 KLKFVKNGKLVTIHGEEAYLVSQLSSFSCIEAGSAEGTAFQGLTIEGAESKEAGAAMAS 991
            L     G  + I   ++ L  +  S+ C E        +   T++  + K+    M++
Sbjct: 471 CL-IQWQGDKIEIVPADSQLKMENPSY-CFEGVMEGSNVYTKDTVDDLDDKQGQGLMSA 527


>UniRef100_Q7X6L5 OSJNBb0093G06.3 protein [Oryza sativa]
          Length = 1986

 Score =  699 bits (1805), Expect = 0.0
 Identities = 411/1142 (35%), Positives = 613/1142 (52%), Gaps = 59/1142 (5%)

Query: 1114 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1172
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 891  PRGVLSLRSDIKQAVTCDKESCDMAQTREMASAREEIRLAATTESA----LITFLQNNKD 946

Query: 1173 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMT 1232
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 947  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1006

Query: 1233 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1292
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1007 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1066

Query: 1293 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1352
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1067 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1126

Query: 1353 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1412
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1127 AYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1186

Query: 1413 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1472
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1187 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1246

Query: 1473 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1528
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1247 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1306

Query: 1529 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1588
            +S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1307 VSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1365

Query: 1589 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEP 1648
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1366 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1411

Query: 1649 LINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1708
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1412 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1460

Query: 1709 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHI 1768
             G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H+
Sbjct: 1461 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1520

Query: 1769 PRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDYRPW 1828
             R  N+ AD LA   S  R    +DV    V+ L  P+             + V+    W
Sbjct: 1521 LRHNNEAADRLANFGSK-REAAPSDV---FVEHLYTPTVPHKDTTQDADTHDVVMVEADW 1576

Query: 1829 YYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEHEA 1885
                 +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV   E 
Sbjct: 1577 REPFIRFLSSQELP-----QDKDEAERISRRSKLYVMHESELYKKSPSGILQRCVSLEEG 1631

Query: 1886 EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPP 1945
             QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P 
Sbjct: 1632 RQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPA 1691

Query: 1946 HALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAK 2005
              L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      
Sbjct: 1692 QELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARD 1750

Query: 2006 FIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKN 2065
            F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  
Sbjct: 1751 FF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGM 1809

Query: 2066 I-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEI 2120
            I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE 
Sbjct: 1810 ILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEF 1869

Query: 2121 PSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKV 2180
             SLR        E  + ++R D L+ +EE R  A+ +   Y   ++   ++ V  R F V
Sbjct: 1870 ESLRF---RNFREERYEEDRVDDLHRLEEAREAALIQSARYLQGLRRYHNRNVRSRAFLV 1926

Query: 2181 GELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2240
            G+LVL  R  Q    R K +P +EGP+++ +    G+  L   DG  + N  N + ++++
Sbjct: 1927 GDLVL--RKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRF 1984

Query: 2241 FA 2242
            +A
Sbjct: 1985 YA 1986



 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 62/264 (23%), Positives = 114/264 (42%), Gaps = 33/264 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 416 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 472

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 473 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 531

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           REY +R+     +I+  + ++ +   F K ++ + +       P       T+    E+A
Sbjct: 532 REYIRRFSEQRNKISD-ISDDVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 585

Query: 333 VRDGIIVFEKAESSVGASKRY---------------GNGHHKKKETEVGMVSAGAGQSIA 377
                  + KAE +V ASK+                G+ +HK ++ +   + A A  S  
Sbjct: 586 NE-----YAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSR 640

Query: 378 TVAPINTAQ--MPPSYPYMPYSQH 399
             + +NT    M    P+ P S H
Sbjct: 641 QRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 844 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8LMM6 Putative gag-pol [Oryza sativa]
          Length = 1986

 Score =  698 bits (1801), Expect = 0.0
 Identities = 414/1144 (36%), Positives = 615/1144 (53%), Gaps = 63/1144 (5%)

Query: 1114 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1172
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 891  PRGVLTLRSDIKQAVTCDKESCDMAQTREIASAREEIRLAATTESA----LITFLQNNKD 946

Query: 1173 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMT 1232
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 947  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1006

Query: 1233 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1292
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1007 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1066

Query: 1293 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1352
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1067 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1126

Query: 1353 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1412
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1127 AYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1186

Query: 1413 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1472
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1187 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1246

Query: 1473 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1528
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1247 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1306

Query: 1529 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1588
            +S+   D + RY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1307 VSEVLADSKARYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1365

Query: 1589 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEP 1648
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1366 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1411

Query: 1649 LINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1708
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1412 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1460

Query: 1709 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHI 1768
             G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H+
Sbjct: 1461 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1520

Query: 1769 PRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPS--HVFAIGDVIDQAGENVVDYR 1826
             R  N+ AD LA   S  R    +DV    V+ L  P+  H     D  D     +V+  
Sbjct: 1521 LRHNNEAADRLANFGSK-RETAPSDV---FVEHLYTPTVPHKDTTQDA-DTRNIAMVE-A 1574

Query: 1827 PWYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEH 1883
             W     +FL S+E P     QDK    R++ R   ++L    LYK++   +L RCV   
Sbjct: 1575 DWREPFIRFLTSQELP-----QDKDEAERISRRSKLYVLHESELYKKSPSGILQRCVSLE 1629

Query: 1884 EAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHV 1943
            E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+
Sbjct: 1630 EGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHL 1689

Query: 1944 PPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVV 2003
            P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T    
Sbjct: 1690 PAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNA 1748

Query: 2004 AKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAAN 2063
              F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN
Sbjct: 1749 RDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERAN 1807

Query: 2064 KNI-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 2118
              I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EV
Sbjct: 1808 GMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEV 1867

Query: 2119 EIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREF 2178
            E  SLR        E  + ++R D L+ +EE R  A+ +   Y   ++   ++ V  R F
Sbjct: 1868 EFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAF 1924

Query: 2179 KVGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVK 2238
             VG+LVL  R  Q    R K +P +EGP+++ +    G+  L   DG  + N  N + ++
Sbjct: 1925 LVGDLVL--RKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLR 1982

Query: 2239 KYFA 2242
            +++A
Sbjct: 1983 RFYA 1986



 Score = 54.7 bits (130), Expect = 3e-05
 Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 33/264 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 416 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 472

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 473 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 531

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 532 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 585

Query: 333 VRDGIIVFEKAESSVGASKRY---------------GNGHHKKKETEVGMVSAGAGQSIA 377
                  + KAE +V ASK+                G+ +HK ++ +   + A A  S  
Sbjct: 586 NE-----YAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSR 640

Query: 378 TVAPINTAQ--MPPSYPYMPYSQH 399
             + +NT    M    P+ P S H
Sbjct: 641 QRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 47.4 bits (111), Expect = 0.005
 Identities = 33/117 (28%), Positives = 55/117 (46%), Gaps = 5/117 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTF-LVKAFDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 948
            ENF    ++F+V D   +Y  +LG P +    AV    +  +K      ++T+  +
Sbjct: 844 RENFRTENISFEVADFETAYHAILGHPALAKFMAVPHYTYMMMKMPGPRGVLTLRSD 900


>UniRef100_Q75KG5 Putative polyprotein [Oryza sativa]
          Length = 1991

 Score =  697 bits (1800), Expect = 0.0
 Identities = 406/1139 (35%), Positives = 612/1139 (53%), Gaps = 53/1139 (4%)

Query: 1114 PYEITRLLEQEKKAIQPHQEEIELINIGTEENKRE-IKIGATLEEGVKQKIIQLLREYPD 1172
            P  +  L    K+A+   +E  ++       + RE I++ AT E      +I  L+   D
Sbjct: 896  PRGVLTLRSDIKQAVTCDKESCDMAQTREMASAREEIRLAATTESA----LITFLQNNKD 951

Query: 1173 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMT 1232
            IFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  
Sbjct: 952  IFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKE 1011

Query: 1233 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1292
            V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D
Sbjct: 1012 VLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLD 1071

Query: 1293 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVE 1352
             +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE
Sbjct: 1072 CYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVE 1131

Query: 1353 VYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1412
             YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ 
Sbjct: 1132 AYVDDVVVKTKQKDDLILDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQA 1191

Query: 1413 DPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1472
            +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E 
Sbjct: 1192 NPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEA 1251

Query: 1473 QEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYY 1528
            Q+AF+  K  L +PP+L  P    PL++Y++   + +  VL  +++E G   K +  IY+
Sbjct: 1252 QKAFEDFKQLLTKPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYF 1311

Query: 1529 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1588
            +S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  +       G+I
Sbjct: 1312 VSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDVLHNREANGRI 1370

Query: 1589 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEP 1648
            A+W + L   DI FK + +IK   LAD +A     ++   + D P E+I +         
Sbjct: 1371 AKWALELMSLDISFKPRTSIKSQALADFVA-----EWTECQEDTPVEKIEH--------- 1416

Query: 1649 LINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1708
                       W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA +
Sbjct: 1417 -----------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALL 1465

Query: 1709 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHI 1768
             G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H+
Sbjct: 1466 HGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCIDDNMMAYRQEVRKLEDKFDGLELSHV 1525

Query: 1769 PRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDYRPW 1828
             R  N+ AD LA   S  R    +DV    V+ L  P+        +    +  +    W
Sbjct: 1526 LRHNNEAADRLANFGSK-REAAPSDV---FVEHLYSPTVPHKDATQVADTHDIAMVEADW 1581

Query: 1829 YYDIKQFLLSREYPPSASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAEQL 1888
               + +FL S+E P    K + + + R +  +++    LYK++   +L RCV   E  QL
Sbjct: 1582 REPLIRFLTSQELP--QYKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQL 1639

Query: 1889 MHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHAL 1948
            + D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L
Sbjct: 1640 LKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQEL 1699

Query: 1949 NVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIK 2008
              +   WPF++WG+DM+G  + KA  G+  + +AID F+KW+EA     +T      F  
Sbjct: 1700 QTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFMAIDKFSKWIEAKPVVTITADNARDFF- 1757

Query: 2009 NNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-- 2066
             NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I  
Sbjct: 1758 INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQ 1817

Query: 2067 ---KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2123
                R+  ++      W   LP  L   RTT   +TG +PF LVYG EA+LP EVE  SL
Sbjct: 1818 RIKARVFDRLKPYAGKWVSQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESL 1877

Query: 2124 RVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGEL 2183
            R        E  + ++R D L+ +EE R  A+ +   Y   ++   ++ V  R F VG+L
Sbjct: 1878 RF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFLVGDL 1934

Query: 2184 VLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2242
            VL  R  Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1935 VL--RKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHIRRFYA 1991



 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 63/264 (23%), Positives = 113/264 (41%), Gaps = 33/264 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 421 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 477

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 478 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 536

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           REY +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 537 REYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 590

Query: 333 VRDGIIVFEKAESSVGASKRY---------------GNGHHKKKETEVGMVSAGAGQSIA 377
                  + KAE +V ASK+                G+ +HK ++ +   + A A  S  
Sbjct: 591 NE-----YAKAEDAVTASKQSGPSWKPKNTPATGGGGSNNHKDRKRKPEELVATAAHSSR 645

Query: 378 TVAPINTAQ--MPPSYPYMPYSQH 399
             + +NT    M    P+ P S H
Sbjct: 646 QRSRVNTFDKIMNSQCPHHPNSNH 669



 Score = 49.3 bits (116), Expect = 0.001
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKSSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 948
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K      ++T+  +
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRGVLTLRSD 905


>UniRef100_Q8RZN9 Putative polyprotein [Oryza sativa]
          Length = 2001

 Score =  695 bits (1793), Expect = 0.0
 Identities = 394/1098 (35%), Positives = 616/1098 (55%), Gaps = 56/1098 (5%)

Query: 1149 IKIGATLEEGVKQKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRR 1208
            I IG  LE+ ++++I+++++E   +FAWS +++ G+D  ++EH +  K    P +QKLRR
Sbjct: 956  ILIGENLEKHIEEEILKVVKENMAVFAWSPDELQGVDRSLIEHNLAIKSGYKPKKQKLRR 1015

Query: 1209 THPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKD 1268
               D     K E++K + A  +  V +PEW+AN V V K +GK RMC+DF DLNKA PKD
Sbjct: 1016 MSTDRQQAAKIELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKD 1075

Query: 1269 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1328
            +FPLP ID LVD TA  ++ SF+D +SGY+Q+ M  ED EKTSFITP+GT+C+  MPFGL
Sbjct: 1076 DFPLPRIDQLVDATAGCELMSFLDAYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGL 1135

Query: 1329 INAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNP 1388
             NAGAT+ R +  +    + + VE Y+DD++VKS     H + L + FE LRK  ++LNP
Sbjct: 1136 KNAGATFARLIGKVLAKQLGRNVEAYIDDIVVKSKQAFTHGKDLQETFENLRKCSVKLNP 1195

Query: 1389 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISH 1448
             KC FGVR+GKLLGF+VS++GIE +PDK+ AI +M  P+  ++V+   GR+  +SRF+S 
Sbjct: 1196 EKCVFGVRAGKLLGFLVSKRGIEANPDKIAAIHQMEPPKNTREVQRLTGRMASLSRFLSK 1255

Query: 1449 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDES 1508
                  P FK LR      W  ECQ+AFD +K YL E P L  P +G+PL+MY+A    +
Sbjct: 1256 SAEKGLPFFKTLRGANTFEWTAECQQAFDDLKKYLHEMPTLASPPKGQPLLMYVAATPAT 1315

Query: 1509 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWL 1568
            +  VL Q++E   ++  +Y++S+     +TRY+ +EK   A+  A+++LRHY ++H   +
Sbjct: 1316 VSAVLVQEEE--NRQVPVYFVSEALQGPKTRYSEVEKLIYAIVMASRKLRHYFLSHDITI 1373

Query: 1569 ISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPI 1628
             S   PI  +     V G+IA+W M L  +D+ + ++ AIK  +LAD +A     ++ P 
Sbjct: 1374 PSAY-PIGEVLTNKEVAGRIAKWAMELLPFDLKYISRTAIKSQVLADFVA-----EWTPN 1427

Query: 1629 EFDFPDEEIMYLKSKDCDEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIP 1688
            E                    + +  +    W +  DGA NA G G  AV+ +P    + 
Sbjct: 1428 E--------------------VEQQEEVKKPWIVFSDGACNAAGAGAAAVVKTPMKQTLK 1467

Query: 1689 FTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIP 1748
            ++ +++F  TNN AEYE  +  + +A  +  + L +  DS LV       +E     +  
Sbjct: 1468 YSVQLVFPSTNNTAEYEGVLLAMRKARALGARRLIVKTDSKLVAGHFSKSFEAKEETMAK 1527

Query: 1749 YRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFR--VNHWNDVPLIKVQRLERPS 1806
            Y + AR    +F  + +  I R+EN  AD LA  ++  +   N + D+       + +PS
Sbjct: 1528 YLEEARLNEKHFLGITVKAITREENGEADELAKAAATGQPLENSFFDI-------ITQPS 1580

Query: 1807 HVFAIGDVIDQAGENVVDYRPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGRFLLDGDI 1866
            +       I + G+       W   I ++L+S + P    +++ K ++ ++ ++ +    
Sbjct: 1581 YEKKEVACIQREGD-------WREPILKYLVSAQLP--EKEEEAKRIQLMSKKYKVVEGQ 1631

Query: 1867 LYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQ 1926
            LYK      LL+CV   E  +++ ++H+G  G H    +++ K++R G YW  +  D  +
Sbjct: 1632 LYKSGVTAPLLKCVTREEGMKMVVEIHEGLCGAHQAPWSVASKVIRQGIYWPTIMKDTEK 1691

Query: 1927 YARKCHKCQIYANKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYF 1986
            Y + C  CQ +      PP  L  +   WPF  WGID++G + P+A    RF++VAI+YF
Sbjct: 1692 YIKTCKACQKFGPMTKAPPKELQPIPPVWPFYRWGIDIVGPL-PRAKGDLRFVIVAIEYF 1750

Query: 1987 TKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHH 2046
            ++W+EA +   +T   V KF+  NIICR+G+P +I+ DNG    +   Q +C+   ++ +
Sbjct: 1751 SRWIEAEAVARITSAAVQKFVWKNIICRFGIPKEIVCDNGKQFESGKFQDMCKGLNLQIN 1810

Query: 2047 NSSPYRPQMNGAVEAANKNIKRIIQKMV--TTYKDWHEMLPYALHGYRTTVRSSTGATPF 2104
             +S   PQ NG VE AN  I   I+K +  +    W E L   L   RTTV  STG TPF
Sbjct: 1811 FASVGHPQTNGVVERANGKIMEAIKKRLEGSAKGKWPEDLLSVLWALRTTVVRSTGMTPF 1870

Query: 2105 SLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQAR 2164
             LVYG EA+ P EV   S R+I + K  E      R   L +++E R++A+ +  SY   
Sbjct: 1871 RLVYGDEAMTPSEVGAHSPRMIFDQKDEE-----GREITLEMLDEIRVEALEKMASYTEG 1925

Query: 2165 MKTAFDKKVHPREFKVGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMD 2224
             K+ +++KV  R  + G+LVLK  +++     GK    +EGP++VKK    GA  L ++D
Sbjct: 1926 TKSYYNQKVKTRPIEEGDLVLKKVLNEV--AVGKLESKWEGPFIVKKKTETGAFKLAYLD 1983

Query: 2225 GVELPNPVNADIVKKYFA 2242
            G EL +  NA  +KK++A
Sbjct: 1984 GEELKHTWNAVSLKKFYA 2001



 Score = 45.1 bits (105), Expect = 0.026
 Identities = 34/142 (23%), Positives = 64/142 (44%), Gaps = 8/142 (5%)

Query: 816 PEAGKG----HNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTF 871
           PE  +G    H   L +SV      +  VL+D GSS +V+      ++      L  +  
Sbjct: 762 PEDAEGILFPHQDPLVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRLTNAGV 821

Query: 872 LVKAFDGSRKNVLGEIDLPITIGPENFL----VTFQVMDINASYSCLLGRPWIHDAGAVT 927
            ++ F G + + +G+I L +  G    +    + F V+D+   Y+ +LGR  I+   A+ 
Sbjct: 822 PLQGFGGQQVHAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAII 881

Query: 928 STLHQKLKFVKNGKLVTIHGEE 949
              +  +K      ++T+ GE+
Sbjct: 882 HHNYICMKLPGLRGVITVRGEQ 903


>UniRef100_Q7XXB9 OSJNBa0027O01.4 protein [Oryza sativa]
          Length = 2013

 Score =  694 bits (1792), Expect = 0.0
 Identities = 409/1112 (36%), Positives = 599/1112 (53%), Gaps = 61/1112 (5%)

Query: 1150 KIGATLEEGVKQKIIQLLREYP-------DIFAWSYEDMPGLDPMIVEHRIPTKPECPPV 1202
            KI  + E   K K I L    P       DIFAW   DMPG+   ++EH +  K +  P+
Sbjct: 944  KISKSGESEAKTKKIPLDPSDPTKTANNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPI 1003

Query: 1203 RQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLN 1262
            +Q+LRR   D    IK E+ K + AGF+  V +P+W+AN V V KK G+ RMCVD+ DLN
Sbjct: 1004 KQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLN 1063

Query: 1263 KASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYK 1322
            K+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY 
Sbjct: 1064 KSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYV 1123

Query: 1323 VMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKY 1382
             MPFGL NAGATYQR +   F   I + VE YVDD++VK+  ++  +  L + F  +R +
Sbjct: 1124 TMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFASIRAF 1183

Query: 1383 KLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYI 1442
            +++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI  M  P T+K V+   G +  +
Sbjct: 1184 RMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAAL 1243

Query: 1443 SRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYL 1502
            SRF+S +     P FKLL+K     W  E Q+AF+  K  L EPP+L  P    PL++Y+
Sbjct: 1244 SRFVSRLGERGMPFFKLLKKTDDFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYV 1303

Query: 1503 AVFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLR 1558
            +   + +  VL  +++E G   K +  IY++S+   D +TRY  ++K    +    ++L 
Sbjct: 1304 SATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTRYPQVQKLLYGILITTRKLS 1363

Query: 1559 HYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1618
            HY   H+  +++   P+  I     V G+IA+W + L   DI FK + +IK   LAD +A
Sbjct: 1364 HYFQGHSVTVVTSF-PLGDILHNREVNGRIAKWALELMSLDISFKPRISIKSQALADFVA 1422

Query: 1619 YQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAV 1678
                 ++   + D P E + +                    W + FDG+    G G G V
Sbjct: 1423 -----EWTECQEDTPAENMEH--------------------WTMHFDGSKRLSGTGAGVV 1457

Query: 1679 IVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGE 1738
            ++SP G  + +   I F  ++N+AEYEA + G+  AI + IK L + GDS LV+NQ+  E
Sbjct: 1458 LISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKE 1517

Query: 1739 WETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPLIK 1798
            W      ++ YR   R+L   F  +EL H+ R  N+ AD LA   S  R    +DV    
Sbjct: 1518 WSYLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRLANFGSK-REAAPSDV---F 1573

Query: 1799 VQRLERPSHVFAIGDVIDQAGENVVDYRPWYYDIKQFLLSREYPPSASKQDKKTLRRLAG 1858
            V+ L  P+        +    +  +    W   + +FL S+E P     QDK    R++ 
Sbjct: 1574 VEHLYTPTVPHKDTTQVAGTHDAAMVEVDWREPLIRFLTSQELP-----QDKDEAERISR 1628

Query: 1859 R---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGY 1915
            R   ++L    LYK++   +L RCV   E  QL+ D+H G  G HA   T+  K  R G+
Sbjct: 1629 RSKLYVLHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGF 1688

Query: 1916 YWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNG 1975
            +W     D  +  R C  CQ +A +IH+P   L  +   WPF++WG+DM+G  + KA  G
Sbjct: 1689 FWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGG 1747

Query: 1976 HRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQ 2035
            +  + VAID F+KW+EA     +T      F   NI+ R+GVP++IITDNGT     V +
Sbjct: 1748 YTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFK 1806

Query: 2036 ALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRIIQKMVTTYKDWHEMLPYALHG 2090
              CE+F I+   +S   P  NG VE AN  I      R+  ++      W + LP  L  
Sbjct: 1807 DFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWS 1866

Query: 2091 YRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEK 2150
             RTT   +TG +PF LVYG EA+LP EVE  SLR        E  + ++R D L+ +EE 
Sbjct: 1867 LRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEV 1923

Query: 2151 RMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRISQQPDPRGKWTPNYEGPYVVK 2210
            R  A+ R   Y   ++   ++ V  R F VG+LVL  R  Q    R K +P +EGP+++ 
Sbjct: 1924 REAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL--RKIQTTRDRHKLSPLWEGPFIIS 1981

Query: 2211 KAFSGGALILTHMDGVELPNPVNADIVKKYFA 2242
            +    G+  L   DG  + N  N + +++++A
Sbjct: 1982 EVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2013



 Score = 55.1 bits (131), Expect = 2e-05
 Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 34/265 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 416 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 472

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 473 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 531

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 532 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 585

Query: 333 VRDGIIVFEKAESSVGASKRY----------------GNGHHKKKETEVGMVSAGAGQSI 376
                  + KAE +V ASK+                 G+ +HK ++ +   + A A  S 
Sbjct: 586 NE-----YAKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSS 640

Query: 377 ATVAPINTAQ--MPPSYPYMPYSQH 399
              + +NT    M    P+ P S H
Sbjct: 641 RQRSRVNTFDKIMNSQCPHHPNSNH 665



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 785 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 844

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 845 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q7XPQ7 OSJNBa0053K19.16 protein [Oryza sativa]
          Length = 2010

 Score =  694 bits (1791), Expect = 0.0
 Identities = 412/1133 (36%), Positives = 606/1133 (53%), Gaps = 66/1133 (5%)

Query: 1132 QEEIELINIGTEENKREI-KIGATLEEGVKQKIIQLLREYP-------DIFAWSYEDMPG 1183
            +E+I L      E +    KI  + E   K K I L    P       DIFAW   DMPG
Sbjct: 922  REDIRLAAATASEGEEPATKISKSGESEAKTKKIPLDPSDPAKTANNKDIFAWKPSDMPG 981

Query: 1184 LDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVANIV 1243
            +   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  V +P+W+AN V
Sbjct: 982  IPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLANPV 1041

Query: 1244 PVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMS 1303
             V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI++ 
Sbjct: 1042 LVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGRELLSFLDCYSGYHQIRLK 1101

Query: 1304 PEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIVKSA 1363
              D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE YVDD++VK+ 
Sbjct: 1102 ESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVVKTK 1161

Query: 1364 DEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREM 1423
             ++  +  L + F  +R ++++LNP KCTFGV SGKL+GF+VS +GI+ +P+KV AI  M
Sbjct: 1162 QKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLVGFMVSHRGIQANPEKVTAILNM 1221

Query: 1424 PAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKNYL 1483
              P T+K V+   G +  +SRF+S +     P FKLL+K     W  E Q+AF+  K  L
Sbjct: 1222 KPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFKKLL 1281

Query: 1484 LEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDCETR 1539
             EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY++S+   D +TR
Sbjct: 1282 TEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADSKTR 1341

Query: 1540 YTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYD 1599
            Y  ++K    +    ++L HY   H+  +++   P+  I       G+IA+W + L   D
Sbjct: 1342 YPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELMSLD 1400

Query: 1600 IVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDPNSK 1659
            I FK + +IK   LAD +A     ++   + D P E + +                    
Sbjct: 1401 ISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------------------- 1435

Query: 1660 WGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRI 1719
            W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA + G+  AI + I
Sbjct: 1436 WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEALLHGLRIAISLGI 1495

Query: 1720 KHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADAL 1779
            K L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H+ R  N+ AD L
Sbjct: 1496 KRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAADRL 1555

Query: 1780 ATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDY--RPWYYDIKQFLL 1837
            A   S   V   +    + V+ L  P+      D    AG + V      W   + +FL 
Sbjct: 1556 ANFGSKREVAPSD----VFVEHLYTPT--VPHKDTTQVAGTHDVAMVETDWREPLIRFLT 1609

Query: 1838 SREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHD 1894
            S+E P     QDK    R++ R   +++    LYK++   +L RCV   E  QL+ D+H 
Sbjct: 1610 SQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLQDIHS 1664

Query: 1895 GTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSP 1954
            G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L  +   
Sbjct: 1665 GICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLS 1724

Query: 1955 WPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICR 2014
            WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F   NI+ R
Sbjct: 1725 WPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHR 1782

Query: 2015 YGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRI 2069
            +GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I      R+
Sbjct: 1783 FGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARV 1842

Query: 2070 IQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEA 2129
              ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE  SLR     
Sbjct: 1843 FDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---R 1899

Query: 2130 KLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRI 2189
               E  + ++R D L+ +EE R  A+ R   Y   ++   ++ V  R F VG+LVL  R 
Sbjct: 1900 NFREERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL--RK 1957

Query: 2190 SQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2242
             Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 1958 IQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 2010



 Score = 53.1 bits (126), Expect = 9e-05
 Identities = 52/211 (24%), Positives = 96/211 (44%), Gaps = 16/211 (7%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 413 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 469

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 470 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 528

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P      +T+    E+A
Sbjct: 529 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKP-----PMTVKLMFEKA 582

Query: 333 VRDGIIVFEKAESSVGASKRYGNGHHKKKET 363
                  + KAE +V ASK+ G    + K T
Sbjct: 583 NE-----YAKAEDAVTASKQSGPSWKQNKGT 608



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 782 LRRTLIDGGSALNILFAKTLDDMQIPHSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 841

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 842 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 885


>UniRef100_Q8GSW6 Putative gag-pol polyprotein [Oryza sativa]
          Length = 2012

 Score =  692 bits (1786), Expect = 0.0
 Identities = 400/1083 (36%), Positives = 589/1083 (53%), Gaps = 54/1083 (4%)

Query: 1172 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1231
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 972  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1031

Query: 1232 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1291
             V +P+W+AN V V KK G+  MCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1032 EVLHPDWLANPVLVRKKTGQWLMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1091

Query: 1292 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1351
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1092 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1151

Query: 1352 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1411
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1152 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1211

Query: 1412 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1471
             +P+KV AI  M +P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1212 ANPEKVTAILNMKSPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDSFRWGPE 1271

Query: 1472 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1527
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1272 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1331

Query: 1528 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1587
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1332 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1390

Query: 1588 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDE 1647
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1391 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1437

Query: 1648 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1707
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1438 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1485

Query: 1708 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHH 1767
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H
Sbjct: 1486 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1545

Query: 1768 IPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDYRP 1827
            + R  N+ AD LA   S  R    +DV    V+ L  P+           A +  +    
Sbjct: 1546 VLRHNNEAADRLANFGSK-REAAPSDV---FVEHLYSPTVPHKDATQAAGAHDVAMVEAD 1601

Query: 1828 WYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEHE 1884
            W   + +FL S+E P     QDK    R++ R   ++L    LYK++   +L RCV   E
Sbjct: 1602 WREPLIRFLTSQELP-----QDKDEAERISRRSKLYVLHEAELYKKSPSGILQRCVSLEE 1656

Query: 1885 AEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVP 1944
              QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P
Sbjct: 1657 GRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLP 1716

Query: 1945 PHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVA 2004
               L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T     
Sbjct: 1717 AQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNAR 1775

Query: 2005 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 2064
             F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN 
Sbjct: 1776 DFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANG 1834

Query: 2065 NI-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVE 2119
             I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE
Sbjct: 1835 MILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTSSRATGQSPFFLVYGAEAMLPSEVE 1894

Query: 2120 IPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFK 2179
              SLR        E  + ++R D L+ +EE R  A+ R   Y   ++   ++ V  R F 
Sbjct: 1895 FESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRAFL 1951

Query: 2180 VGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKK 2239
            VG+LVL  R  Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++
Sbjct: 1952 VGDLVL--RKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRR 2009

Query: 2240 YFA 2242
            ++A
Sbjct: 2010 FYA 2012



 Score = 55.1 bits (131), Expect = 2e-05
 Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 34/265 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 415 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 471

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 472 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 530

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 531 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 584

Query: 333 VRDGIIVFEKAESSVGASKRY----------------GNGHHKKKETEVGMVSAGAGQSI 376
                  + KAE +V ASK+                 G+ +HK ++ +   + A A  S 
Sbjct: 585 NE-----YAKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSS 639

Query: 377 ATVAPINTAQ--MPPSYPYMPYSQH 399
              + +NT    M    P+ P S H
Sbjct: 640 RQRSRVNTFDKIMNSQCPHHPNSNH 664



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 784 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 843

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 844 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 887


>UniRef100_Q8W3B5 Putative gag-pol [Oryza sativa]
          Length = 2026

 Score =  692 bits (1785), Expect = 0.0
 Identities = 400/1085 (36%), Positives = 589/1085 (53%), Gaps = 58/1085 (5%)

Query: 1172 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1231
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1232 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1291
             V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVHHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1292 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1351
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1352 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1411
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1412 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1471
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1276

Query: 1472 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1527
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1528 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1587
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1395

Query: 1588 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDE 1647
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1442

Query: 1648 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1707
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1708 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHH 1767
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1768 IPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDY-- 1825
            + R  N+ AD LA   S   V   +    + V+ L  P+      D    AG + V    
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPT--VPHKDTTQVAGTHDVAMVE 1604

Query: 1826 RPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDE 1882
              W   + +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV  
Sbjct: 1605 ADWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSL 1659

Query: 1883 HEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIH 1942
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1660 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1719

Query: 1943 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 2002
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1720 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADN 1778

Query: 2003 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2062
               F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE A
Sbjct: 1779 APDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDCCEDFGIKICYASVAHPMSNGQVERA 1837

Query: 2063 NKNI-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2117
            N  I      R+  ++      W E LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1838 NGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1897

Query: 2118 VEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPRE 2177
            VE  SLR        E  + ++R D L+ +EE R  A+ +   Y   ++   ++ V  R 
Sbjct: 1898 VEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRA 1954

Query: 2178 FKVGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2237
            F VG+LVL  R  Q    R K +P +EGP+++      G+  L   DG  + N  N + +
Sbjct: 1955 FLVGDLVL--RKIQTTRDRHKLSPLWEGPFIISAVTRPGSYRLKREDGTLVDNSWNIEHL 2012

Query: 2238 KKYFA 2242
            ++++A
Sbjct: 2013 RRFYA 2017



 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 54/211 (25%), Positives = 95/211 (44%), Gaps = 16/211 (7%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     +   M +Y
Sbjct: 420 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANY 476

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  +F L ++ QK  ES 
Sbjct: 477 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQFDLYNVVQKSGESL 535

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 536 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 589

Query: 333 VRDGIIVFEKAESSVGASKRYGNGHHKKKET 363
                  + KAE +V ASK+ G     KK+T
Sbjct: 590 NE-----YAKAEDAVTASKQSGPSWKPKKDT 615



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q8S7A3 Putative retroelement [Oryza sativa]
          Length = 2017

 Score =  691 bits (1783), Expect = 0.0
 Identities = 400/1085 (36%), Positives = 588/1085 (53%), Gaps = 58/1085 (5%)

Query: 1172 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1231
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1232 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1291
             V +P+W+AN V V KK G+ RMCVD+ DLNK  PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1292 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1351
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1352 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1411
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1412 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1471
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1217 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFHWGPE 1276

Query: 1472 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1527
             Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEDGHVQKVQRPIY 1336

Query: 1528 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1587
            ++S+   D +TRY  ++K    +    ++L HY   H   +++   P+  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHLVTVVTSF-PLGDILHNREANGR 1395

Query: 1588 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDE 1647
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKVEH-------- 1442

Query: 1648 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1707
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1708 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHH 1767
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1768 IPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDY-- 1825
            + R  N+ AD LA   S   V   +    + V+ L  P+      D    AG + V    
Sbjct: 1551 VLRHNNKAADRLANFGSKREVAPSD----VFVEHLYAPT--VPHKDTTQVAGTHDVAMVE 1604

Query: 1826 RPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDE 1882
              W   + +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV  
Sbjct: 1605 ADWREPLIRFLTSQELP-----QDKDEAERISRRSRLYVMHEAELYKKSPSGILQRCVSL 1659

Query: 1883 HEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIH 1942
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1660 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1719

Query: 1943 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 2002
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1720 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAFGGYTHLFVAIDKFSKWIEAKPVVTITADN 1778

Query: 2003 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2062
               F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE A
Sbjct: 1779 ARDFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERA 1837

Query: 2063 NKNI-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2117
            N  I      R+  ++      W E LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1838 NGMILQGIKARVFDRLKPYAGKWVEQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1897

Query: 2118 VEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPRE 2177
            VE  SLR        E  + ++R D L+ +EE R  A+ +   Y   ++   ++ V  R 
Sbjct: 1898 VEFESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRA 1954

Query: 2178 FKVGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2237
            F VG+LVL  R  Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +
Sbjct: 1955 FLVGDLVL--RKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLIDNSWNIEHL 2012

Query: 2238 KKYFA 2242
            ++++A
Sbjct: 2013 RRFYA 2017



 Score = 53.9 bits (128), Expect = 6e-05
 Identities = 62/265 (23%), Positives = 112/265 (41%), Gaps = 34/265 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     +   M +Y
Sbjct: 420 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANY 476

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 477 LPVALADSARSWLHGLPRGTIESWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 535

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 536 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 589

Query: 333 VRDGIIVFEKAESSVGASKRY----------------GNGHHKKKETEVGMVSAGAGQSI 376
                  + KAE +V ASK+                 G+ +HK ++ +   + A A  S 
Sbjct: 590 NE-----YAKAEDAVTASKQSGPSWKPNKGTPATGGGGSNNHKDRKRKPEELVATATHSS 644

Query: 377 ATVAPINTAQ--MPPSYPYMPYSQH 399
              + +NT    M    P+ P S H
Sbjct: 645 RQRSRVNTFDKIMNSQCPHHPNSNH 669



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q7X8E7 OSJNBa0042F21.5 protein [Oryza sativa]
          Length = 1950

 Score =  690 bits (1781), Expect = 0.0
 Identities = 401/1085 (36%), Positives = 589/1085 (53%), Gaps = 58/1085 (5%)

Query: 1172 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1231
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 910  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 969

Query: 1232 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1291
             V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+
Sbjct: 970  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFL 1029

Query: 1292 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1351
            D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1030 DCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1089

Query: 1352 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1411
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1090 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1149

Query: 1412 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1471
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 1150 ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPE 1209

Query: 1472 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1527
             Q+AF+  K  L EPPIL  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1210 AQKAFEDFKKLLTEPPILASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1269

Query: 1528 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1587
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1270 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1328

Query: 1588 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDE 1647
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + +        
Sbjct: 1329 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENMEH-------- 1375

Query: 1648 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1707
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1376 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1423

Query: 1708 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHH 1767
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H
Sbjct: 1424 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1483

Query: 1768 IPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPS--HVFAIGDVIDQAGENVVDY 1825
            + R  N+ AD LA   S   +   +    + V+ L  P+  H     D  D     +V+ 
Sbjct: 1484 VLRHNNEAADRLANFGSKREMAPSD----VFVEHLYTPTVPHKDTTQDA-DTHDVALVE- 1537

Query: 1826 RPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDE 1882
              W     +FL S+E P     QDK    R++ R   + +    LYK++   +L RCV  
Sbjct: 1538 ADWREPFIRFLTSQELP-----QDKDEAERISRRSKLYAMHEAELYKKSPSGILQRCVSL 1592

Query: 1883 HEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIH 1942
             E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH
Sbjct: 1593 EEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIH 1652

Query: 1943 VPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQV 2002
            +P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T   
Sbjct: 1653 LPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADN 1711

Query: 2003 VAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAA 2062
               F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  NG VE A
Sbjct: 1712 ARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERA 1770

Query: 2063 NKNI-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2117
            N  I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP E
Sbjct: 1771 NGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSE 1830

Query: 2118 VEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPRE 2177
            VE  SLR        E  + ++R D L+ +EE R  A+ R   Y   ++   ++ V  R 
Sbjct: 1831 VEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHNRNVRSRA 1887

Query: 2178 FKVGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIV 2237
            F VG+LVL  R  Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +
Sbjct: 1888 FLVGDLVL--RKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHL 1945

Query: 2238 KKYFA 2242
            ++++A
Sbjct: 1946 RRFYA 1950



 Score = 55.1 bits (131), Expect = 2e-05
 Identities = 62/265 (23%), Positives = 113/265 (42%), Gaps = 34/265 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     ++  M +Y
Sbjct: 353 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDNKAMANY 409

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESF 272
              +L + A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES 
Sbjct: 410 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESL 468

Query: 273 REYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEA 332
           R+Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A
Sbjct: 469 RDYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKA 522

Query: 333 VRDGIIVFEKAESSVGASKRY----------------GNGHHKKKETEVGMVSAGAGQSI 376
                  + KAE +V ASK+                 G+ +HK ++ +   + A A  S 
Sbjct: 523 NE-----YTKAEDAVTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSS 577

Query: 377 ATVAPINTAQ--MPPSYPYMPYSQH 399
              + +NT    M    P+ P S H
Sbjct: 578 RQRSRVNTFDKIMNSQCPHHPNSNH 602



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 722 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 781

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 782 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 825


>UniRef100_Q75IS9 Putative polyprotein [Oryza sativa]
          Length = 1756

 Score =  688 bits (1776), Expect = 0.0
 Identities = 395/1083 (36%), Positives = 586/1083 (53%), Gaps = 54/1083 (4%)

Query: 1172 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1231
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 716  DIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFVQDRKDAIKEELTKLLAAGFIK 775

Query: 1232 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1291
             V +P+W+AN V V KK G+ RMCVD+ DLNK  PKD F LP ID +VD+TA  ++ SF+
Sbjct: 776  EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKCCPKDPFGLPRIDQVVDSTAGCELLSFL 835

Query: 1292 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1351
            D +SGY+QI++   D  KTSFITP G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 836  DCYSGYHQIRLKESDCLKTSFITPIGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 895

Query: 1352 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1411
            E YVDD+++K+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 896  EAYVDDVVIKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 955

Query: 1412 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1471
             +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E
Sbjct: 956  ANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPE 1015

Query: 1472 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1527
             Q+AF+  K +L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY
Sbjct: 1016 AQKAFEDFKKFLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIY 1075

Query: 1528 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1587
            ++S+   D +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+
Sbjct: 1076 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGR 1134

Query: 1588 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDE 1647
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1135 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1181

Query: 1648 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1707
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1182 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1229

Query: 1708 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHH 1767
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H
Sbjct: 1230 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1289

Query: 1768 IPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDYRP 1827
            + R  N+ AD LA   S   V   +    + V+ L  P+        I    +  +    
Sbjct: 1290 VLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHKDTTQIAGTHDVALVEAD 1345

Query: 1828 WYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEHE 1884
            W     +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV   E
Sbjct: 1346 WREPFIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEE 1400

Query: 1885 AEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVP 1944
              QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P
Sbjct: 1401 GRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLP 1460

Query: 1945 PHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVA 2004
               L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T     
Sbjct: 1461 AQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNAR 1519

Query: 2005 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 2064
             F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE AN 
Sbjct: 1520 DFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANG 1578

Query: 2065 NI-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVE 2119
             I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE
Sbjct: 1579 MILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVE 1638

Query: 2120 IPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFK 2179
              SLR        E  + ++R D L+ +EE R  A+ +   Y   ++   ++ V  R F 
Sbjct: 1639 FESLRF---RNFREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFL 1695

Query: 2180 VGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKK 2239
            VG+LVL  R  Q    R K +P +EGP+++ +    G+  L   DG  + N  N + +++
Sbjct: 1696 VGDLVL--RKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRR 1753

Query: 2240 YFA 2242
            ++A
Sbjct: 1754 FYA 1756



 Score = 48.9 bits (115), Expect = 0.002
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 528 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 587

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGE 948
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K     +++++  +
Sbjct: 588 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMKMPGPRRVLSLRSD 644



 Score = 48.9 bits (115), Expect = 0.002
 Identities = 58/258 (22%), Positives = 106/258 (40%), Gaps = 31/258 (12%)

Query: 161 QDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHYFQDSLME 220
           QD    + V     FK    +KY+G T P++ +  Y   +     +   M +Y   +L +
Sbjct: 163 QDPIAGAGVTTSAGFKPTGIEKYDGTTNPESWLTVYGLAIRAAGGDSKAMANYLPVALAD 222

Query: 221 DAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESFREYAQRW 279
            A  W   L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES R+Y +R+
Sbjct: 223 SARSWLHGLPRGTIRSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESLRDYIRRF 281

Query: 280 RGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIV 339
                +I+   D + +   F K ++ + +       P       T+    E+A       
Sbjct: 282 SEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKANE----- 330

Query: 340 FEKAESSVGASKRY----------------GNGHHKKKETEVGMVSAGAGQSIATVAPIN 383
           + KAE +V ASK+                 G+ +HK ++ +   + A A  S    + +N
Sbjct: 331 YAKAEDAVTASKQSGPSWKPNKGTPATGGGGSNNHKDRKRKPEELVATATHSSRQRSRVN 390

Query: 384 TAQ--MPPSYPYMPYSQH 399
           T    M    P+ P S H
Sbjct: 391 TFDKIMNSQCPHHPNSNH 408


>UniRef100_Q7XWE4 OSJNBa0035O13.3 protein [Oryza sativa]
          Length = 2008

 Score =  684 bits (1765), Expect = 0.0
 Identities = 398/1092 (36%), Positives = 587/1092 (53%), Gaps = 68/1092 (6%)

Query: 1163 IIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQ 1222
            +I  L+   DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ 
Sbjct: 973  LITFLQNNKDIFAWKPSDMPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELT 1032

Query: 1223 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1282
            K + AGF+  V +P+W+AN V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+T
Sbjct: 1033 KLLAAGFIKEVLHPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDST 1092

Query: 1283 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1342
            A  ++ SF+D +SGY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   
Sbjct: 1093 AGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRC 1152

Query: 1343 FHDMIHKEVEVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1402
            F   I + VE YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLG
Sbjct: 1153 FSTQIGRNVEAYVDDVVVKTKQKDDLISDLEETFVSIRAFRMKLNPEKCTFGVPSGKLLG 1212

Query: 1403 FIVSQKGIEVDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1462
            F+VS +GI+ +P+KV AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K
Sbjct: 1213 FMVSHRGIQANPEKVTAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKK 1272

Query: 1463 NQPVVWNDECQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLG-QQDETG- 1520
                 W  E Q+AF+  K  L EPP+L  P    PL++Y++   + +  VL  +++E G 
Sbjct: 1273 TDNFQWGPEAQKAFEDFKKLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLAVEREEEGH 1332

Query: 1521 --KKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYI 1578
              K +  IY++S+   D +TRY  ++K               L  H+  +++   P+  I
Sbjct: 1333 VQKVQRPIYFVSEVLADSKTRYPQVQK--------------LLYGHSVTVVTSF-PLGDI 1377

Query: 1579 FEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIM 1638
                   G+IA+W + L   DI FK + +IK   LAD +A     ++   + D P E + 
Sbjct: 1378 LHNREANGRIAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAENME 1432

Query: 1639 YLKSKDCDEPLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECT 1698
            +                    W + FDG+    G G G V++SP G  + +   I F  +
Sbjct: 1433 H--------------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSAS 1472

Query: 1699 NNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLT 1758
            +N+AEYEA + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L  
Sbjct: 1473 HNVAEYEALLHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLED 1532

Query: 1759 YFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQA 1818
             F  +EL H+ R  N+ AD LA   S   V   +    + V+ L  P+        +   
Sbjct: 1533 KFDGLELSHVLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHKDTTQVAGT 1588

Query: 1819 GENVVDYRPWYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMV 1875
             +  V    W   + +FL S+E P     QDK    R++ R   +++    LYK++   +
Sbjct: 1589 HDVAVVETDWREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGI 1643

Query: 1876 LLRCVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQ 1935
            L RCV   E  QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ
Sbjct: 1644 LQRCVSLEEGRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQ 1703

Query: 1936 IYANKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 1995
             +A +IH+P   L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA   
Sbjct: 1704 FFARQIHLPAQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPV 1762

Query: 1996 TNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQM 2055
              +T      F   NI+ R+GVP++IITDNGT     V +  CE+F I+   +S   P  
Sbjct: 1763 VTITADNARDFF-INIVHRFGVPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMS 1821

Query: 2056 NGAVEAANKNI-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGM 2110
            NG VE AN  I      R+  ++      W + LP  L   RTT   +TG +PF LVYG 
Sbjct: 1822 NGQVERANGMILQGIKARVFDRLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGA 1881

Query: 2111 EAVLPLEVEIPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFD 2170
            EA+LP EVE  SLR        E  + ++R D L+ +EE R  A+ R   Y   ++   +
Sbjct: 1882 EAMLPSEVEFESLRF---RNFREERYEEDRVDDLHRLEEAREAALIRSARYLQGLRRYHN 1938

Query: 2171 KKVHPREFKVGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPN 2230
            + V  R F VG+LVL  R  Q    R K +P +EGP+++ +    G+  L   DG  + N
Sbjct: 1939 RNVRSRAFLVGDLVL--RKIQTTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDN 1996

Query: 2231 PVNADIVKKYFA 2242
              N + +++++A
Sbjct: 1997 SWNIEHLRRFYA 2008



 Score = 53.1 bits (126), Expect = 9e-05
 Identities = 58/251 (23%), Positives = 106/251 (42%), Gaps = 31/251 (12%)

Query: 168 KVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHYFQDSLMEDAAEWYT 227
           +VD P  FK    +KY+G T P + +  Y   +     ++  M +Y   +L + A  W  
Sbjct: 427 RVDWPAGFKPTGIEKYDGTTNPGSWLTVYGLAIRAAGGDNKAMANYLPVALADSARSWLH 486

Query: 228 SLSKDDVHTFDELATAFRSHYGFNTRLKPNREF-LRSLSQKKEESFREYAQRWRGAAARI 286
            L +  + ++ EL   F +++   T  +P  ++ L ++ QK  ES R+Y +R+     +I
Sbjct: 487 GLPRGTIGSWAELRDHFIANFQ-GTFERPGTQYDLYNVIQKSGESLRDYIRRFSEQRNKI 545

Query: 287 TPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVRDGIIVFEKAESS 346
           +   D + +   F K ++ + +       P       T+    E+A       + KAE +
Sbjct: 546 SDITD-DVIIAAFTKGIRHEELVGKFGRKPPR-----TVKLMFEKANE-----YAKAEDA 594

Query: 347 VGASKRY----------------GNGHHKKKETEVGMVSAGAGQSIATVAPINTAQ--MP 388
           V ASK+                 G+ +HK ++ +   + A A  S    + +NT    M 
Sbjct: 595 VTASKQSGPSWKQNKGTPATGGGGSNNHKDRKRKPAELVATASHSSRQRSRVNTFDKIMN 654

Query: 389 PSYPYMPYSQH 399
              P+ P S H
Sbjct: 655 SQCPHHPNSNH 665



 Score = 48.5 bits (114), Expect = 0.002
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 785 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 844

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 845 RENFRTENISFEVADFETAYHAILGRPALAKFMAVPHYTYMMMK 888


>UniRef100_Q93Y89 Gag-pol [Oryza sativa]
          Length = 2017

 Score =  681 bits (1757), Expect = 0.0
 Identities = 392/1083 (36%), Positives = 585/1083 (53%), Gaps = 54/1083 (4%)

Query: 1172 DIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLM 1231
            DIFAW   DMPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+ 
Sbjct: 977  DIFAWKPSDMPGIPREVIEHSLYVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIK 1036

Query: 1232 TVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFM 1291
             V +P+W+AN V V KK G+ RMCVD+ DLN + PKD F LP ID +VD+TA  ++ SF+
Sbjct: 1037 EVLHPDWLANPVLVRKKTGQWRMCVDYTDLNISCPKDPFGLPRIDQVVDSTAGCELLSFL 1096

Query: 1292 DGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEV 1351
            D + GY+QI++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + V
Sbjct: 1097 DCYLGYHQIRLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNV 1156

Query: 1352 EVYVDDMIVKSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIE 1411
            E YVDD++VK+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+
Sbjct: 1157 EAYVDDVVVKTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQ 1216

Query: 1412 VDPDKVRAIREMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDE 1471
             +P+K+ AI  M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  +
Sbjct: 1217 ANPEKITAILNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDDFQWGPD 1276

Query: 1472 CQEAFDSIKNYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIY 1527
             Q+AF+  K  L EPP+L  P    PL++Y+A   + +  VL  +++E G   K +  IY
Sbjct: 1277 AQKAFEDFKKLLTEPPVLASPHPQEPLLLYIAAASQVVSTVLVVEREEEGHVQKVQRPIY 1336

Query: 1528 YLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGK 1587
            ++S+   D +TRY  ++K    +    ++L HY  +H+  +++    +  I       G+
Sbjct: 1337 FVSEVLADSKTRYPQVQKLLYGILITTRKLSHYFQSHSVTVVTSFS-LGDILHNREANGR 1395

Query: 1588 IARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDE 1647
            IA+W + L   DI FK + +IK   LAD +A     ++   + D P E++ +        
Sbjct: 1396 IAKWALELMSLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH-------- 1442

Query: 1648 PLINEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEAC 1707
                        W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA 
Sbjct: 1443 ------------WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSASHNVAEYEAL 1490

Query: 1708 IFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHH 1767
            + G+  AI + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H
Sbjct: 1491 LHGLRIAISLGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSH 1550

Query: 1768 IPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDYRP 1827
            + R  N+ AD LA   S   V   +    + V+ L  P+        I    +  +    
Sbjct: 1551 VLRHNNEAADRLANFGSKREVAPSD----VFVEHLYTPTVPHKDTTQIAGTHDVALVEAD 1606

Query: 1828 WYYDIKQFLLSREYPPSASKQDKKTLRRLAGR---FLLDGDILYKRNYDMVLLRCVDEHE 1884
            W   + +FL S+E P     QDK    R++ R   +++    LYK++   +L RCV   E
Sbjct: 1607 WREPLIRFLTSQELP-----QDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEE 1661

Query: 1885 AEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVP 1944
              QL+ D+H G  G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P
Sbjct: 1662 GRQLLKDIHSGICGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLP 1721

Query: 1945 PHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVA 2004
               L  +   WPF++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T     
Sbjct: 1722 AQELQTIPLSWPFAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNAR 1780

Query: 2005 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 2064
             F   NI+ R+GVP++IITDNG      V +  CE+F I+   +S   P  NG VE AN 
Sbjct: 1781 DFF-INIVHRFGVPNRIITDNGRQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANG 1839

Query: 2065 NI-----KRIIQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVE 2119
             I      R+  ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE
Sbjct: 1840 MILQGIKARVFDRLKPYAGKWVKQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVE 1899

Query: 2120 IPSLRVIMEAKLSEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFK 2179
              SLR        E  + ++R D L+ +EE R  A+ +   Y   ++   ++ V  R F 
Sbjct: 1900 FESLRF---RNYREERYEEDRVDDLHRLEEVREAALIQSARYLQGLRRYHNRNVRSRAFL 1956

Query: 2180 VGELVLKGRISQQPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKK 2239
            VG+LVL  R  Q    R K +P +EGP+++      G+  L   DG  + N  N + +++
Sbjct: 1957 VGDLVL--RKIQTTRDRHKLSPLWEGPFIISDVTRPGSYRLKREDGTLVDNSWNIEHLRR 2014

Query: 2240 YFA 2242
            ++A
Sbjct: 2015 FYA 2017



 Score = 51.6 bits (122), Expect = 3e-04
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 32/264 (12%)

Query: 154 NGDSIKTQDLCLVSKVDVPKKFKVPEFDKYNGLTCPQNHIVKYVRKMGNYKDNDSLMIHY 213
           +G +  T DL    +VD P  FK    +KY+G T P++ +  Y   +     +   M +Y
Sbjct: 420 DGVAAFTDDL---RRVDWPAGFKPTGIEKYDGTTNPESWLTIYGLAIRAAGGDSKAMANY 476

Query: 214 FQDSLMEDAAEWYTSLSKDDVHTFDELATAFRSHYGFNTRLKPNREFLRSLSQKKEESFR 273
              +L + A  W   L +  + ++ EL   F +++         +  L ++ QK  ES R
Sbjct: 477 LPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFEHPGTQYDLYNVIQKSGESLR 536

Query: 274 EYAQRWRGAAARITPALDEEEMTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAV 333
           +Y +R+     +I+   D + +   F K ++ + +       P       T+    E+A 
Sbjct: 537 DYIRRFSEQRNKISDITD-DVIIAAFTKGIRHEELVGKFGRKPPK-----TVKLMFEKAN 590

Query: 334 RDGIIVFEKAESSVGASKRY----------------GNGHHKKKETEVGMVSAGAGQSIA 377
                 + KAE +V ASK+                 G+ +HK ++ +   + A A  S  
Sbjct: 591 E-----YAKAEDAVTASKQSGPSWKPNKGTPAKGGGGSNNHKDRKRKPEELVATATHSSR 645

Query: 378 TVAPINTAQ--MPPSYPYMPYSQH 399
             + +NT    M    P+ P S H
Sbjct: 646 QHSRVNTFDKIMNSQCPHHPNSNH 669



 Score = 47.8 bits (112), Expect = 0.004
 Identities = 33/104 (31%), Positives = 51/104 (48%), Gaps = 5/104 (4%)

Query: 837 ISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVKA-FDGSRKNVLGEIDLPITIGP 895
           +   L+D GS+LN++   TLD +    + L+ S         G     LG+I LP+T G 
Sbjct: 789 LRRTLIDGGSALNILFAKTLDDMQIPRSELKPSNAPFHGVIPGLSATPLGQITLPVTFGT 848

Query: 896 -ENFL---VTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLK 935
            ENF    ++F+V D   +Y  +LGRP +    AV    +  +K
Sbjct: 849 RENFRTENISFEVDDFETAYHAILGRPALAKFMAVPHYTYMMMK 892


>UniRef100_Q9SSW6 GAG-POL [Oryza sativa]
          Length = 1032

 Score =  679 bits (1753), Expect = 0.0
 Identities = 390/1071 (36%), Positives = 583/1071 (54%), Gaps = 48/1071 (4%)

Query: 1181 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKNEVQKQIDAGFLMTVEYPEWVA 1240
            MPG+   ++EH +  K +  P++Q+LRR   D    IK E+ K + AGF+  V +P+W+A
Sbjct: 1    MPGIPREVIEHSLHVKEDAKPIKQRLRRFAQDRKDAIKEELTKLLAAGFIKEVLHPDWLA 60

Query: 1241 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1300
            N V V KK G+ RMCVD+ DLNK+ PKD F LP ID +VD+TA  ++ SF+D +SGY+QI
Sbjct: 61   NPVLVRKKTGQWRMCVDYTDLNKSCPKDPFGLPRIDQVVDSTAGCELLSFLDCYSGYHQI 120

Query: 1301 KMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMIHKEVEVYVDDMIV 1360
            ++   D  KTSFITP+G +CY  MPFGL NAGATYQR +   F   I + VE YVDD++V
Sbjct: 121  RLKESDCLKTSFITPFGAYCYVTMPFGLKNAGATYQRMIQRCFSTQIGRNVEAYVDDVVV 180

Query: 1361 KSADEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAI 1420
            K+  ++  +  L + F  +R ++++LNP KCTFGV SGKLLGF+VS +GI+ +P+KV AI
Sbjct: 181  KTKQKDDLISDLEETFASIRAFRMKLNPEKCTFGVPSGKLLGFMVSHRGIQANPEKVTAI 240

Query: 1421 REMPAPQTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIK 1480
              M  P T+K V+   G +  +SRF+S +     P FKLL+K     W  E Q+AF+  K
Sbjct: 241  LNMKPPSTQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDNFQWGPEAQKAFEDFK 300

Query: 1481 NYLLEPPILVPPVEGRPLIMYLAVFDESMGCVL-GQQDETG---KKEHAIYYLSKKFTDC 1536
              L EPP+L  P    PL++Y++   + +  VL  +++E G   K +  IY++S+   D 
Sbjct: 301  KLLTEPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHVQKVQRPIYFVSEVLADS 360

Query: 1537 ETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLS 1596
            +TRY  ++K    +    ++L HY   H+  +++   P+  I       G+IA+W + L 
Sbjct: 361  KTRYPQVQKLLYGILITTRKLSHYFQGHSVTVVTSF-PLGDILHNREANGRIAKWALELM 419

Query: 1597 EYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCDEPLINEGPDP 1656
              DI FK + +IK   LAD +A     ++   + D P E++ +                 
Sbjct: 420  SLDISFKPRISIKSQALADFVA-----EWTECQEDTPAEKMEH----------------- 457

Query: 1657 NSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAID 1716
               W + FDG+    G G G V++SP G  + +   I F  ++N+AEYEA + G+  AI 
Sbjct: 458  ---WTMHFDGSKRLSGTGAGVVLISPTGERLSYVLWIHFSTSHNVAEYEALLHGLRIAIS 514

Query: 1717 MRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMA 1776
            + IK L + GDS LV+NQ+  EW      ++ YR   R+L   F  +EL H+ R  N+ A
Sbjct: 515  LGIKRLIVRGDSQLVVNQVMKEWSCLDDNMMAYRQEVRKLEDKFDGLELSHVLRHNNEAA 574

Query: 1777 DALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVDYRPWYYDIKQFL 1836
            D LA   S  R    +DV    V+ L  P+        +    +  +    W   + +FL
Sbjct: 575  DRLANFGSK-REAAPSDV---FVEHLYTPTVPHKDTTQVADTHDIAMVEADWREPLIRFL 630

Query: 1837 LSREYPPSASKQDKKTLRRLAGRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGT 1896
             S+E P    K + + + R +  +++    LYK++   +L RCV   E  QL+ D+H G 
Sbjct: 631  TSQELP--RDKDEAERISRRSKLYVMHEAELYKKSPSGILQRCVSLEEGRQLLKDIHSGI 688

Query: 1897 FGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYANKIHVPPHALNVMSSPWP 1956
             G HA   T+  K  R G++W     D  +  R C  CQ +A +IH+P   L  +   WP
Sbjct: 689  CGNHAAARTIVGKAYRQGFFWPTAVSDADKIVRTCEGCQFFARQIHLPAQELQTIPLSWP 748

Query: 1957 FSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYG 2016
            F++WG+DM+G  + KA  G+  + VAID F+KW+EA     +T      F   NI+ R+G
Sbjct: 749  FAVWGLDMVGPFK-KAVGGYTHLFVAIDKFSKWIEAKPVVTITADNARDFF-INIVHRFG 806

Query: 2017 VPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNI-----KRIIQ 2071
            VP++IITDNGT     V +  CE+F I+   +S   P  NG VE AN  I      R+  
Sbjct: 807  VPNRIITDNGTQFTGGVFKDFCEDFGIKICYASVAHPMSNGQVERANGMILQGIKARVFD 866

Query: 2072 KMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKL 2131
            ++      W + LP  L   RTT   +TG +PF LVYG EA+LP EVE  SLR       
Sbjct: 867  RLKPYAGKWVQQLPSVLWSLRTTPSRATGQSPFFLVYGAEAMLPSEVEFESLRF---RNF 923

Query: 2132 SEAEWCQNRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVHPREFKVGELVLKGRISQ 2191
             E  + ++R D L+ +EE R  A+ R   Y   ++   ++ V  R F VG+LVL  R  Q
Sbjct: 924  REERYEEDRVDDLHRLEEVREAALIRSARYLQGLRRYHNRNVRSRAFLVGDLVL--RKIQ 981

Query: 2192 QPDPRGKWTPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYFA 2242
                R K +P +EGP+++ +    G+  L   DG  + N  N + +++++A
Sbjct: 982  TTRDRHKLSPLWEGPFIISEVTRPGSYRLKREDGTLVDNSWNIEHLRRFYA 1032


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.318    0.135    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,879,446,316
Number of Sequences: 2790947
Number of extensions: 175379797
Number of successful extensions: 655921
Number of sequences better than 10.0: 30039
Number of HSP's better than 10.0 without gapping: 4761
Number of HSP's successfully gapped in prelim test: 25363
Number of HSP's that attempted gapping in prelim test: 616442
Number of HSP's gapped (non-prelim): 43002
length of query: 2242
length of database: 848,049,833
effective HSP length: 143
effective length of query: 2099
effective length of database: 448,944,412
effective search space: 942334320788
effective search space used: 942334320788
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)