BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134322.16 - phase: 0
(690 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9C952 Putative cleavage and polyadenylation specifici... 1136 0.0
UniRef100_Q8VY18 Putative cleavage and polyadenylation specifici... 1134 0.0
UniRef100_Q84JJ2 Putative cleavage and polyadenylation specifity... 1091 0.0
UniRef100_Q6DIH6 Cleavage and polyadenylation specific factor 3,... 712 0.0
UniRef100_UPI00003691D6 UPI00003691D6 UniRef100 entry 710 0.0
UniRef100_Q8CIM0 Cleavage and polyadenylation specificity factor... 709 0.0
UniRef100_Q9UKF6 Cleavage and polyadenylation specificity factor... 709 0.0
UniRef100_P79101 Cleavage and polyadenylation specificity factor... 709 0.0
UniRef100_Q9QXK7 Cleavage and polyadenylation specificity factor... 706 0.0
UniRef100_Q5XGZ1 Hypothetical protein [Xenopus laevis] 705 0.0
UniRef100_UPI00003AD147 UPI00003AD147 UniRef100 entry 700 0.0
UniRef100_Q5U3T4 Cleavage and polyadenylation specificity factor... 696 0.0
UniRef100_Q6DRG6 Cleavage and polyadenylation specificity factor... 696 0.0
UniRef100_UPI00001CF969 UPI00001CF969 UniRef100 entry 691 0.0
UniRef100_UPI000036112B UPI000036112B UniRef100 entry 688 0.0
UniRef100_Q86A79 Similar to Homo sapiens (Human). Cleavage and p... 688 0.0
UniRef100_UPI00000151D3 UPI00000151D3 UniRef100 entry 681 0.0
UniRef100_Q5R428 Hypothetical protein DKFZp459J042 [Pongo pygmaeus] 669 0.0
UniRef100_Q7PX56 ENSANGP00000013989 [Anopheles gambiae str. PEST] 664 0.0
UniRef100_UPI00002DAB97 UPI00002DAB97 UniRef100 entry 658 0.0
>UniRef100_Q9C952 Putative cleavage and polyadenylation specificity factor;
72745-70039 [Arabidopsis thaliana]
Length = 693
Score = 1136 bits (2939), Expect = 0.0
Identities = 563/691 (81%), Positives = 635/691 (91%), Gaps = 7/691 (1%)
Query: 2 SSVKKRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMA 61
+S+K+RE I+R+ DQLIVTPLGAG+EVGRSCVYM+++GK +LFDCGIHP YSGMA
Sbjct: 6 TSLKRREQ---PISRDG-DQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMA 61
Query: 62 ALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYV 121
ALPYFDEIDPS++DVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+DYV
Sbjct: 62 ALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYV 121
Query: 122 KVSKVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAG 181
KVSKVSV+DML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAG
Sbjct: 122 KVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAG 181
Query: 182 VRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTIS 241
VR+LYTGDYSREEDRHLRAAE PQFSPD+CIIEST GVQ HQ RH REKRFTDVIHST++
Sbjct: 182 VRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVA 241
Query: 242 QGGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMND 301
QGGRVLIPA+ALGRAQELLLILDEYWANHP+L NIPIYYASPLAKKC+ VY+TY LSMND
Sbjct: 242 QGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMND 301
Query: 302 RIQN--AKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNS 359
RI+N A SNPF FKHIS L+SID F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+
Sbjct: 302 RIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNA 361
Query: 360 CVIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNP 419
C+IPGY+VEGTLAKTI+NEPKEVTLMNGL+APL+MQVHYISFSAHAD AQTS FL+EL P
Sbjct: 362 CIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMP 421
Query: 420 PNIILVHGAANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKT 479
PNIILVHG ANEM RLKQKL+T+F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAEKT
Sbjct: 422 PNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKT 481
Query: 480 PEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIY 539
P+VG+TVSG+LVKKGFTYQIMAPD+LHVFSQLSTA VTQRITIP+ GAF VI+ RL++I+
Sbjct: 482 PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIF 541
Query: 540 ESVEPSVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDL 599
ESVE S DEESG+P L VH+RVTVK ESEKH+SL W+SDPI+DMVSDS+VAL+LNI+R++
Sbjct: 542 ESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREV 601
Query: 600 PKIV-AESDATKIEEENEKKTEKVMQALLNSLFGNVKVGENGKLIINIDGNVAELNKESG 658
PKIV E DA K EEEN KK EKV+ ALL SLFG+VK+GENGKL+I +DGNVA+L+KESG
Sbjct: 602 PKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDGNVAQLDKESG 661
Query: 659 EVESENEGLKERVRTAFRRIQSSVKPIPLSA 689
EVESE+ GLKERVR AF RIQS+VKPIPLSA
Sbjct: 662 EVESEHSGLKERVRVAFERIQSAVKPIPLSA 692
>UniRef100_Q8VY18 Putative cleavage and polyadenylation specificity factor
[Arabidopsis thaliana]
Length = 693
Score = 1134 bits (2933), Expect = 0.0
Identities = 562/691 (81%), Positives = 634/691 (91%), Gaps = 7/691 (1%)
Query: 2 SSVKKRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMA 61
+S+K+RE I+R+ DQLIVTPLGAG+EVGRSCVYM+++GK +LFDCGIHP YSGMA
Sbjct: 6 TSLKRREQ---PISRDG-DQLIVTPLGAGSEVGRSCVYMSFRGKNILFDCGIHPAYSGMA 61
Query: 62 ALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYV 121
ALPYFDEIDPS++DVLLITHFH+DHAASLPYFLEKTTF GRVFMT+ATKAIYKLLL+DYV
Sbjct: 62 ALPYFDEIDPSSIDVLLITHFHIDHAASLPYFLEKTTFNGRVFMTHATKAIYKLLLTDYV 121
Query: 122 KVSKVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAG 181
KVSKVSV+DML+DEQDIN+SMDKIEVIDFHQTVEVNGI+FWCYTAGHVLGAAMFMVDIAG
Sbjct: 122 KVSKVSVEDMLFDEQDINKSMDKIEVIDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAG 181
Query: 182 VRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTIS 241
VR+LYTGDYSREEDRHLRAAE PQFSPD+CIIEST GVQ HQ RH REKRFTDVIHST++
Sbjct: 182 VRILYTGDYSREEDRHLRAAELPQFSPDICIIESTSGVQLHQSRHIREKRFTDVIHSTVA 241
Query: 242 QGGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMND 301
QGGRVLIPA+ALGRAQELLLILDEYWANHP+L NIPIYYASPLAKKC+ VY+TY LSMND
Sbjct: 242 QGGRVLIPAFALGRAQELLLILDEYWANHPDLHNIPIYYASPLAKKCMAVYQTYILSMND 301
Query: 302 RIQN--AKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNS 359
RI+N A SNPF FKHIS L+SID F DVGPSVVMA+PGGLQSGLSRQLFD WCSDKKN+
Sbjct: 302 RIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGLSRQLFDSWCSDKKNA 361
Query: 360 CVIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNP 419
C+IPGY+VEGTLAKTI+NEPKEVTLMNGL+APL+MQVHYISFSAHAD AQTS FL+EL P
Sbjct: 362 CIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADYAQTSTFLKELMP 421
Query: 420 PNIILVHGAANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKT 479
PNIILVHG ANEM RLKQKL+T+F D NTKI+TPKNC+SVEMYFNS+K+AKTIG+LAEKT
Sbjct: 422 PNIILVHGEANEMMRLKQKLLTEFPDGNTKIMTPKNCESVEMYFNSEKLAKTIGRLAEKT 481
Query: 480 PEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIY 539
P+VG+TVSG+LVKKGFTYQIMAPD+LHVFSQLSTA VTQRITIP+ GAF VI+ RL++I+
Sbjct: 482 PDVGDTVSGILVKKGFTYQIMAPDELHVFSQLSTATVTQRITIPFVGAFGVIKHRLEKIF 541
Query: 540 ESVEPSVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDL 599
ESVE S DEESG+P L VH+RVTVK ESEKH+SL W+SDPI+DMVSDS+VAL+LNI+R++
Sbjct: 542 ESVEFSTDEESGLPALKVHERVTVKQESEKHISLQWSSDPISDMVSDSIVALILNISREV 601
Query: 600 PKIV-AESDATKIEEENEKKTEKVMQALLNSLFGNVKVGENGKLIINIDGNVAELNKESG 658
PKIV E DA K EEEN KK EKV+ ALL SLFG+VK+GENGKL+I +D NVA+L+KESG
Sbjct: 602 PKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIRVDSNVAQLDKESG 661
Query: 659 EVESENEGLKERVRTAFRRIQSSVKPIPLSA 689
EVESE+ GLKERVR AF RIQS+VKPIPLSA
Sbjct: 662 EVESEHSGLKERVRVAFERIQSAVKPIPLSA 692
>UniRef100_Q84JJ2 Putative cleavage and polyadenylation specifity factor [Oryza
sativa]
Length = 700
Score = 1091 bits (2822), Expect = 0.0
Identities = 537/684 (78%), Positives = 611/684 (88%), Gaps = 7/684 (1%)
Query: 6 KRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPY 65
KR+++GG DQLI+TPLGAGNEVGRSCVYM++KG+TVLFDCGIHP YSGMAALPY
Sbjct: 19 KRQASGG----REGDQLIITPLGAGNEVGRSCVYMSFKGRTVLFDCGIHPAYSGMAALPY 74
Query: 66 FDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSK 125
FDEIDPST+DVLLITHFHLDHAASLPYFLEKTTFKGRVFMT+ATKAIY+LLLSDYVKVSK
Sbjct: 75 FDEIDPSTIDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTHATKAIYRLLLSDYVKVSK 134
Query: 126 VSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVL 185
VSV+DML+DEQDI RSMDKIEVIDFHQT+EVNGIRFWCYTAGHVLGAAMFMVDIAGVRVL
Sbjct: 135 VSVEDMLFDEQDILRSMDKIEVIDFHQTLEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVL 194
Query: 186 YTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGR 245
YTGDYSREEDRHL+AAE PQFSPD+CIIESTYGVQ HQPRH REKRFTDVIH+T+SQGGR
Sbjct: 195 YTGDYSREEDRHLKAAELPQFSPDICIIESTYGVQQHQPRHVREKRFTDVIHTTVSQGGR 254
Query: 246 VLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRIQN 305
VLIPA+ALGRAQELLLILDEYWANHPEL IPIYYASPLAKKC+ VY+TY SMN+RI+N
Sbjct: 255 VLIPAFALGRAQELLLILDEYWANHPELHKIPIYYASPLAKKCMAVYQTYINSMNERIRN 314
Query: 306 --AKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIP 363
A+SNPF FKHI +L+SID F DVGPSVVMASPGGLQSGLSRQLFD WC+DKKNSCVIP
Sbjct: 315 QFAQSNPFHFKHIESLNSIDNFHDVGPSVVMASPGGLQSGLSRQLFDKWCTDKKNSCVIP 374
Query: 364 GYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNII 423
GYVVEGTLAKTI+NEP+EVTL NGL+APLHMQVHYISFSAHAD QTS FL+EL PPNI+
Sbjct: 375 GYVVEGTLAKTIINEPREVTLANGLTAPLHMQVHYISFSAHADFPQTSTFLDELQPPNIV 434
Query: 424 LVHGAANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVG 483
LVHG ANEM RLKQKL++QF N K++ PKNCQSVEMYF+S+KMAKTIG+LAEK PE G
Sbjct: 435 LVHGEANEMSRLKQKLISQFDGTNIKVVNPKNCQSVEMYFSSEKMAKTIGRLAEKVPEAG 494
Query: 484 ETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVE 543
E+V+GLLVKKGFTYQIMAP+DL V++QLSTAN+TQRI +PYSG+F VI+ RLKQIYESVE
Sbjct: 495 ESVNGLLVKKGFTYQIMAPEDLRVYTQLSTANITQRIAVPYSGSFEVIKYRLKQIYESVE 554
Query: 544 PSVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIV 603
S EES VP L+VH+RVT++ ESE +V+L W+SDPI+DMVSDSVVA+VLNI R+ PK+V
Sbjct: 555 SST-EESDVPTLIVHERVTIRLESESYVTLQWSSDPISDMVSDSVVAMVLNIGREGPKVV 613
Query: 604 AESDATKIEEENEKKTEKVMQALLNSLFGNVKVGENGKLIINIDGNVAELNKESGEVESE 663
+A K +EE E+ +KV+ AL+ SLFG+VKV E GKL+I++DG VA L+ SG VE E
Sbjct: 614 PVEEAVKTQEETERVAQKVVYALMVSLFGDVKVAEEGKLVISVDGQVAHLDGRSGGVECE 673
Query: 664 NEGLKERVRTAFRRIQSSVKPIPL 687
N L+ER++TAFRRIQ +V+PIPL
Sbjct: 674 NATLRERIKTAFRRIQGAVRPIPL 697
>UniRef100_Q6DIH6 Cleavage and polyadenylation specific factor 3, 73kDa [Xenopus
tropicalis]
Length = 692
Score = 712 bits (1837), Expect = 0.0
Identities = 363/702 (51%), Positives = 489/702 (68%), Gaps = 25/702 (3%)
Query: 1 MSSVKKRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGM 60
MS +K ES I E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM
Sbjct: 1 MSVKRKAES---AIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGM 57
Query: 61 AALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDY 120
ALPY D IDP+ +D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDY
Sbjct: 58 DALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDY 117
Query: 121 VKVSKVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIA 180
VKVS +S DDMLY E D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IA
Sbjct: 118 VKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIA 177
Query: 181 GVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTI 240
GV++LYTGD+SR+EDRHL AAE P PD+ IIESTYG H+ R RE RF + +H +
Sbjct: 178 GVKLLYTGDFSRQEDRHLMAAEIPNVKPDILIIESTYGTHIHEKREEREARFCNTVHDIV 237
Query: 241 SQGGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMN 300
++GGR LIP +ALGRAQELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MN
Sbjct: 238 NRGGRALIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMN 297
Query: 301 DRI--QNAKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 358
D+I Q +NPF FKHIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N
Sbjct: 298 DKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRN 357
Query: 359 SCVIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELN 418
+I GY VEGTLAK I++EP+E+ M+G PL M V YISFSAH D QTS F+ L
Sbjct: 358 GVIIAGYCVEGTLAKHIMSEPEEIATMSGQKLPLKMSVDYISFSAHTDYQQTSEFVRALK 417
Query: 419 PPNIILVHGAANEMGRLKQKLMTQFADRN---TKILTPKNCQSVEMYFNSQKMAKTIGKL 475
PP++ILVHG NEM RLK L+ ++ D + ++ P+N ++V + F +K+AK +G L
Sbjct: 418 PPHVILVHGEQNEMARLKAALIREYEDNDEVEIEVHNPRNTEAVTLNFRGEKLAKVMGLL 477
Query: 476 AEKTPEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRL 535
A+K PE G+ +SG+LVK+ F Y I+ P DL ++ L+ + VTQ+ IPY+G F ++ +L
Sbjct: 478 ADKKPEQGQRISGILVKRNFNYHILCPSDLSSYTDLAMSTVTQKQAIPYTGPFNLLSCQL 537
Query: 536 KQIYESVEP-SVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLN 594
+Q+ VE V+E+ L V VTV ++ V L W ++P NDM +D+V+ ++L
Sbjct: 538 QQLTGDVEEIEVNEKDA---LRVFKAVTVVRDAGM-VYLEWVANPANDMYADTVITVILE 593
Query: 595 I--NRDLPKIVAESDATKIEEENEKKTEKVMQALLNSLFGN--VKVGENGKLIINIDGNV 650
+ N K VA + +++ + +K ++ +L +FG+ V + G + + +DG
Sbjct: 594 LQSNPKANKAVATRASKEVDMDAYRKR---LEMMLQDIFGDDCVNCEDAGSITVTVDGKS 650
Query: 651 AELNKESGEVE-----SENEGLKERVRTAFRRIQSSVKPIPL 687
A L+ E+ VE E+E L+E V+ A +R+ ++ P L
Sbjct: 651 AILSMETRTVEYEEGIDEDETLREMVQQAAQRLYDALCPASL 692
>UniRef100_UPI00003691D6 UPI00003691D6 UniRef100 entry
Length = 684
Score = 710 bits (1832), Expect = 0.0
Identities = 360/685 (52%), Positives = 479/685 (69%), Gaps = 18/685 (2%)
Query: 14 INRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPST 73
I E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+
Sbjct: 4 IPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE 63
Query: 74 VDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLY 133
+D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY
Sbjct: 64 IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLY 123
Query: 134 DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSRE 193
E D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+
Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQ 183
Query: 194 EDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYAL 253
EDRHL AAE P PD+ IIESTYG H+ R RE RF + +H +++GGR LIP +AL
Sbjct: 184 EDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFAL 243
Query: 254 GRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI--QNAKSNPF 311
GRAQELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I Q +NPF
Sbjct: 244 GRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF 303
Query: 312 AFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTL 371
FKHIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTL
Sbjct: 304 VFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTL 363
Query: 372 AKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANE 431
AK I++EP+E+T M+G PL M V YISFSAH D QTS F+ L PP++ILVHG NE
Sbjct: 364 AKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNE 423
Query: 432 MGRLKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSG 488
M RLK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+K PE G+ VSG
Sbjct: 424 MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSG 483
Query: 489 LLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDE 548
+LVK+ F Y I++P DL ++ L+ + V Q IPY+G F ++ +L+++ VE +
Sbjct: 484 ILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEELEIQ 543
Query: 549 ESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDA 608
E P L V +TV E V L W ++P NDM +D+V ++L + + PKI +
Sbjct: 544 EK--PALKVFKNITVIQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSN-PKI-RKGAV 598
Query: 609 TKIEEENEKKT-EKVMQALLNSLFGN--VKVGENGKLIINIDGNVAELNKESGEVESE-- 663
K+ ++ E K ++ +L +FG V V ++ L + +DG A LN E+ VE E
Sbjct: 599 QKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILSVTVDGKTANLNLETRTVECEEG 658
Query: 664 ---NEGLKERVRTAFRRIQSSVKPI 685
+E L+E V A +R+ ++ P+
Sbjct: 659 SEDDESLREMVELAAQRLYEALTPV 683
>UniRef100_Q8CIM0 Cleavage and polyadenylation specificity factor 3 [Mus musculus]
Length = 684
Score = 709 bits (1830), Expect = 0.0
Identities = 358/685 (52%), Positives = 479/685 (69%), Gaps = 18/685 (2%)
Query: 14 INRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPST 73
I E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+
Sbjct: 4 IPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE 63
Query: 74 VDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLY 133
+D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY
Sbjct: 64 IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLY 123
Query: 134 DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSRE 193
E D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+
Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQ 183
Query: 194 EDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYAL 253
EDRHL AAE P PD+ IIESTYG H+ R RE RF + +H +++GGR LIP +AL
Sbjct: 184 EDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFAL 243
Query: 254 GRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI--QNAKSNPF 311
GRAQELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I Q +NPF
Sbjct: 244 GRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF 303
Query: 312 AFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTL 371
FKHIS L S+D F D+GPSVVMASPG +Q+GLSR+LF+ WC+DK+N +I GY VEGTL
Sbjct: 304 VFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTL 363
Query: 372 AKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANE 431
AK I++EP+E+T M+G PL M V YISFSAH D QTS F+ L PP++ILVHG NE
Sbjct: 364 AKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNE 423
Query: 432 MGRLKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSG 488
M RLK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+K PE G+ VSG
Sbjct: 424 MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSG 483
Query: 489 LLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDE 548
+LVK+ F Y I++P DL ++ L+ + V Q IPY+G F ++ +L+++ VE +
Sbjct: 484 ILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFYLLYYQLQKLTGDVEELEIQ 543
Query: 549 ESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDA 608
E P L V +TV E V L W ++P NDM +D+V ++L + + PKI +
Sbjct: 544 EK--PALKVFKSITVVQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSN-PKI-RKGAV 598
Query: 609 TKIEEENEKKT-EKVMQALLNSLFGN--VKVGENGKLIINIDGNVAELNKESGEVESE-- 663
K+ ++ E K ++ +L +FG V V ++ L + +DG A +N E+ VE E
Sbjct: 599 QKVSKKLEMHVYSKRLEVMLQDIFGEDCVSVKDDSVLSVTVDGKTANINLETRAVECEEG 658
Query: 664 ---NEGLKERVRTAFRRIQSSVKPI 685
+E L+E V A +R+ ++ P+
Sbjct: 659 SEDDESLREMVELAAQRLYEALTPV 683
>UniRef100_Q9UKF6 Cleavage and polyadenylation specificity factor, 73 kDa subunit
[Homo sapiens]
Length = 684
Score = 709 bits (1830), Expect = 0.0
Identities = 360/685 (52%), Positives = 479/685 (69%), Gaps = 18/685 (2%)
Query: 14 INRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPST 73
I E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+
Sbjct: 4 IPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE 63
Query: 74 VDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLY 133
+D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY
Sbjct: 64 IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLY 123
Query: 134 DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSRE 193
E D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+
Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQ 183
Query: 194 EDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYAL 253
EDRHL AAE P PD+ IIESTYG H+ R RE RF + +H +++GGR LIP +AL
Sbjct: 184 EDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFAL 243
Query: 254 GRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI--QNAKSNPF 311
GRAQELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I Q +NPF
Sbjct: 244 GRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF 303
Query: 312 AFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTL 371
FKHIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTL
Sbjct: 304 VFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTL 363
Query: 372 AKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANE 431
AK I++EP+E+T M+G PL M V YISFSAH D QTS F+ L PP++ILVHG NE
Sbjct: 364 AKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNE 423
Query: 432 MGRLKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSG 488
M RLK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+K PE G+ VSG
Sbjct: 424 MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSG 483
Query: 489 LLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDE 548
+LVK+ F Y I++P DL ++ L+ + V Q IPY+G F ++ +L+++ VE +
Sbjct: 484 ILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLCYQLQKLTGDVEELEIQ 543
Query: 549 ESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDA 608
E P L V +TV E V L W ++P NDM +D+V ++L + + PKI +
Sbjct: 544 EK--PALKVFKNITVIQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSN-PKI-RKGAV 598
Query: 609 TKIEEENEKKT-EKVMQALLNSLFGN--VKVGENGKLIINIDGNVAELNKESGEVESE-- 663
K+ ++ E K ++ +L +FG V V ++ L + +DG A LN E+ VE E
Sbjct: 599 QKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDDSILSVTVDGKTANLNLETRTVECEEG 658
Query: 664 ---NEGLKERVRTAFRRIQSSVKPI 685
+E L+E V A +R+ ++ P+
Sbjct: 659 SEDDESLREMVELAAQRLYEALTPV 683
>UniRef100_P79101 Cleavage and polyadenylation specificity factor, 73 kDa subunit
[Bos taurus]
Length = 684
Score = 709 bits (1829), Expect = 0.0
Identities = 359/685 (52%), Positives = 478/685 (69%), Gaps = 18/685 (2%)
Query: 14 INRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPST 73
I E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+
Sbjct: 4 IPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE 63
Query: 74 VDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLY 133
+D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY
Sbjct: 64 IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLY 123
Query: 134 DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSRE 193
E D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+
Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQ 183
Query: 194 EDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYAL 253
EDRHL AAE P PD+ IIESTYG H+ R RE RF + +H +++GGR LIP +AL
Sbjct: 184 EDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFAL 243
Query: 254 GRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI--QNAKSNPF 311
GRAQELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I Q +NPF
Sbjct: 244 GRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF 303
Query: 312 AFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTL 371
FKHIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTL
Sbjct: 304 VFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTL 363
Query: 372 AKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANE 431
AK I++EP+E+T M+G PL M V YISFSAH D QTS F+ L PP++ILVHG NE
Sbjct: 364 AKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNE 423
Query: 432 MGRLKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSG 488
M RLK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+K PE G+ VSG
Sbjct: 424 MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSG 483
Query: 489 LLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDE 548
+LVK+ F Y I++P DL ++ L+ + V Q IPY+G F ++ +L+++ VE +
Sbjct: 484 ILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEELEIQ 543
Query: 549 ESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDA 608
E P L V +TV E V L W ++P NDM +D+V ++L + + PKI +
Sbjct: 544 EK--PALKVFKNITVIQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSN-PKI-RKGAV 598
Query: 609 TKIEEENEKKT-EKVMQALLNSLFGN--VKVGENGKLIINIDGNVAELNKESGEVESE-- 663
K+ ++ E K ++ +L +FG V V + L + +DG A +N E+ VE E
Sbjct: 599 QKVSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSILSVTVDGKTANINLETRTVECEEG 658
Query: 664 ---NEGLKERVRTAFRRIQSSVKPI 685
+E L+E V A +R+ ++ P+
Sbjct: 659 SEDDESLREMVELAAQRLYEALTPV 683
>UniRef100_Q9QXK7 Cleavage and polyadenylation specificity factor, 73 kDa subunit
[Mus musculus]
Length = 684
Score = 706 bits (1822), Expect = 0.0
Identities = 357/685 (52%), Positives = 477/685 (69%), Gaps = 18/685 (2%)
Query: 14 INRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPST 73
I E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+
Sbjct: 4 IPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE 63
Query: 74 VDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLY 133
+D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY
Sbjct: 64 IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLY 123
Query: 134 DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSRE 193
E D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+
Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQ 183
Query: 194 EDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYAL 253
EDRHL AAE P PD+ IIESTYG H+ R RE RF +H +++GGR LIP +AL
Sbjct: 184 EDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFWHTVHDIVNRGGRGLIPVFAL 243
Query: 254 GRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI--QNAKSNPF 311
GRAQELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I Q +NPF
Sbjct: 244 GRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF 303
Query: 312 AFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTL 371
FKHIS L S+D F D+GPSVVMASPG +Q+GLSR+LF+ WC+DK+N +I GY VEGTL
Sbjct: 304 VFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTL 363
Query: 372 AKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANE 431
AK I++EP+E+T M+G PL M V YISFSAH D QTS F+ L PP++ILVHG NE
Sbjct: 364 AKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNE 423
Query: 432 MGRLKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSG 488
M RLK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+K PE G+ VSG
Sbjct: 424 MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSG 483
Query: 489 LLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDE 548
+LVK+ F Y I++P DL ++ L+ + V Q IPY+G F ++ +L+++ VE +
Sbjct: 484 ILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFYLLYYQLQKLTGDVEELDIQ 543
Query: 549 ESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDA 608
E P L V +TV E V W ++P NDM +D+V ++L + + PKI +
Sbjct: 544 EK--PALKVFKSITVVQEPGM-VGSEWLANPSNDMYADTVTTVILEVQSN-PKI-RKGAV 598
Query: 609 TKIEEENEKKT-EKVMQALLNSLFGN--VKVGENGKLIINIDGNVAELNKESGEVESE-- 663
K+ ++ E K ++ +L +FG V V ++ L + +DG A +N E+ VE E
Sbjct: 599 QKVSKKLEMHVYSKRLEVMLQDIFGEDCVSVKDDSVLSVTVDGKTANINLETRAVECEEG 658
Query: 664 ---NEGLKERVRTAFRRIQSSVKPI 685
+E L+E V A +R+ ++ P+
Sbjct: 659 SEDDESLREMVELAAQRLYEALTPV 683
>UniRef100_Q5XGZ1 Hypothetical protein [Xenopus laevis]
Length = 692
Score = 705 bits (1820), Expect = 0.0
Identities = 359/699 (51%), Positives = 486/699 (69%), Gaps = 25/699 (3%)
Query: 1 MSSVKKRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGM 60
MS +K ES I E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM
Sbjct: 1 MSVKRKAES---AIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGM 57
Query: 61 AALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDY 120
ALPY D IDP+ +D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDY
Sbjct: 58 DALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDY 117
Query: 121 VKVSKVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIA 180
VKVS +S DDMLY E D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IA
Sbjct: 118 VKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIA 177
Query: 181 GVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTI 240
GV++LYTGD+SR+EDRHL AAE P PD+ IIESTYG H+ R RE RF + +H +
Sbjct: 178 GVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIV 237
Query: 241 SQGGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMN 300
++GGR LIP +ALGRAQELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MN
Sbjct: 238 NRGGRSLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMN 297
Query: 301 DRI--QNAKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKN 358
D+I Q +NPF FKHIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N
Sbjct: 298 DKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRN 357
Query: 359 SCVIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELN 418
+I GY VEGTLAK I++EP+E+ M+G PL M V YISFSAH D QTS F+ L
Sbjct: 358 GVIIAGYCVEGTLAKHIMSEPEEIVTMSGQKLPLKMSVDYISFSAHTDYQQTSEFVRALK 417
Query: 419 PPNIILVHGAANEMGRLKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKL 475
PP++ILVHG NEM RLK L+ ++ D + ++ P+N ++V + F +K+AK +G L
Sbjct: 418 PPHVILVHGEQNEMARLKAALIREYEDNEEVDIEVHNPRNTEAVTLNFRGEKLAKVMGFL 477
Query: 476 AEKTPEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRL 535
A+K PE + +SG+LVK+ F Y I+ P DL ++ L+ + VTQ+ IP++G F ++ +L
Sbjct: 478 ADKKPEQAQRISGILVKRNFNYHILCPSDLSSYTDLAMSTVTQKQAIPFTGPFNLLFCQL 537
Query: 536 KQIYESVEP-SVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLN 594
+Q+ VE V+E+ L V VTV +++ V L W ++P NDM +D+V+ ++L
Sbjct: 538 QQLTGDVEEIEVNEKDA---LRVFKAVTVVKDADV-VYLEWVANPANDMYADTVITVILE 593
Query: 595 I--NRDLPKIVAESDATKIEEENEKKTEKVMQALLNSLFGN--VKVGENGKLIINIDGNV 650
+ N K VA + +++ + +K ++ +L +FG V + + + +DG
Sbjct: 594 LQSNPKANKAVASKASKEVDTDAYRKR---LEMMLQDIFGEDCVNCEDTANITVTVDGKS 650
Query: 651 AELNKESGEVE-----SENEGLKERVRTAFRRIQSSVKP 684
A L+ E+ VE E+E L+E V+ A +R+ ++ P
Sbjct: 651 AILSMETRTVEYEEGIDEDETLREMVQQAAQRLYDALCP 689
>UniRef100_UPI00003AD147 UPI00003AD147 UniRef100 entry
Length = 667
Score = 700 bits (1807), Expect = 0.0
Identities = 350/672 (52%), Positives = 469/672 (69%), Gaps = 20/672 (2%)
Query: 28 GAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPSTVDVLLITHFHLDHA 87
GAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+ +D+LLI+HFHLDH
Sbjct: 1 GAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHC 60
Query: 88 ASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLYDEQDINRSMDKIEV 147
+LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY E D+ SMDKIE
Sbjct: 61 GALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIET 120
Query: 148 IDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFS 207
I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AAE P
Sbjct: 121 INFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIK 180
Query: 208 PDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYW 267
PD+ IIESTYG H+ R RE RF + +H +++GGR LIP +ALGRAQELLLILDEYW
Sbjct: 181 PDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYW 240
Query: 268 ANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI--QNAKSNPFAFKHISALSSIDIF 325
NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I Q +NPF FKHIS L S+D F
Sbjct: 241 QNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHF 300
Query: 326 KDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLAKTILNEPKEVTLM 385
D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTLAK I++EP+E+T M
Sbjct: 301 DDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTM 360
Query: 386 NGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANEMGRLKQKLMTQFAD 445
+G PL M V YISFSAH D QTS F+ L PP++ILVHG NEM RLK L+ ++ D
Sbjct: 361 SGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYED 420
Query: 446 R---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMAP 502
+ ++ P+N ++V + F +K+AK +G LA+K PE G+ +SG+LVK+ F Y I++P
Sbjct: 421 NDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKPEQGQRISGILVKRNFNYHILSP 480
Query: 503 DDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDEESGVPMLLVHDRVT 562
DL ++ L+ + VTQ + IPY+G F ++ +L+++ VE ++ P L V +T
Sbjct: 481 CDLSNYTDLAMSTVTQTLAIPYTGPFNLLFYQLQKLTGDVEEIEIQQK--PALKVFKSIT 538
Query: 563 VKHESEKHVSLHWASDPINDMVSDSVVALVLNI--NRDLPKIVAESDATKIEEENEKKTE 620
V E V L W ++P NDM +D+V ++L + N + K +TK++ E +K
Sbjct: 539 VIQEPGM-VVLEWVANPANDMYADTVTTVILEVQSNPKIQKAAVHKVSTKVDMEEYRKR- 596
Query: 621 KVMQALLNSLFGN--VKVGENGKLIINIDGNVAELNKESGEVESE-----NEGLKERVRT 673
M+ +L +FG V E L + +DG A L+ E+ + E +E L+E V
Sbjct: 597 --MEMMLQDMFGEDCVSSKEGSILCVTVDGKTANLSLETRTADCEPGSEDDESLREMVEL 654
Query: 674 AFRRIQSSVKPI 685
A +R+ ++ P+
Sbjct: 655 AAQRLYDALSPV 666
>UniRef100_Q5U3T4 Cleavage and polyadenylation specificity factor 3 [Brachydanio
rerio]
Length = 690
Score = 696 bits (1797), Expect = 0.0
Identities = 355/687 (51%), Positives = 477/687 (68%), Gaps = 29/687 (4%)
Query: 17 ETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPSTVDV 76
E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+ +D+
Sbjct: 14 EESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDL 73
Query: 77 LLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLYDEQ 136
LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY E
Sbjct: 74 LLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTET 133
Query: 137 DINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDR 196
D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDR
Sbjct: 134 DLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDR 193
Query: 197 HLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYALGRA 256
HL AAE P PD+ I ESTYG H+ R RE RF + +H +++ GR LIP +ALGRA
Sbjct: 194 HLMAAEIPSVKPDILITESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRA 253
Query: 257 QELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRIQNA--KSNPFAFK 314
QELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I+ A +NPF FK
Sbjct: 254 QELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKAININNPFVFK 313
Query: 315 HISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLAKT 374
HIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTLAK
Sbjct: 314 HISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKH 373
Query: 375 ILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANEMGR 434
I++EP+E+T M+G PL M V YISFSAH D QTS F+ L PP++ILVHG NEM R
Sbjct: 374 IMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMAR 433
Query: 435 LKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLV 491
LK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+K G+ VSG+LV
Sbjct: 434 LKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKCSQGQRVSGILV 493
Query: 492 KKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEP-SVDEES 550
KK F+Y I++P DL ++ L+ + V Q IP++G F ++ S+L+ + VE + E+S
Sbjct: 494 KKNFSYHILSPSDLSNYTDLAMSTVKQTQAIPFTGPFPLLLSQLRHLTGDVEEIEMSEKS 553
Query: 551 GVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDATK 610
V V + +TV HE+ V L W ++P+NDM +D+V +VL + + PK A K
Sbjct: 554 TVK---VFNSITVIHENNL-VVLEWFANPLNDMYADAVTTVVLEVQSN-PK------AQK 602
Query: 611 IEEENEKKTE-KVMQALLNSLFGN------VKVGENGKLIINIDGNVAELNKESGEVE-- 661
+ EKK + V Q L +F + V + L +N+D A ++ E+ VE
Sbjct: 603 ALQPQEKKVDVNVFQNRLLKMFQDMFGEECVDFKDKNCLAVNVDEKTAFIDLETRTVEYE 662
Query: 662 ---SENEGLKERVRTAFRRIQSSVKPI 685
E++ L+E + A +R+ ++ P+
Sbjct: 663 EPNPEDDSLREMLELAVQRLYEAINPV 689
>UniRef100_Q6DRG6 Cleavage and polyadenylation specificity factor 3 [Brachydanio
rerio]
Length = 690
Score = 696 bits (1796), Expect = 0.0
Identities = 355/687 (51%), Positives = 477/687 (68%), Gaps = 29/687 (4%)
Query: 17 ETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPSTVDV 76
E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+ +D+
Sbjct: 14 EESDQLLIRPLGAGQEVGRSCIILEFKGRKIMVDCGIHPGLEGMDALPYIDLIDPAEIDL 73
Query: 77 LLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLYDEQ 136
LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY E
Sbjct: 74 LLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTET 133
Query: 137 DINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDR 196
D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDR
Sbjct: 134 DLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDR 193
Query: 197 HLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYALGRA 256
HL AAE P PD+ I ESTYG H+ R RE RF + +H +++ GR LIP +ALGRA
Sbjct: 194 HLMAAEIPSVKPDILITESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRA 253
Query: 257 QELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRIQNA--KSNPFAFK 314
QELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I+ A +NPF FK
Sbjct: 254 QELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKAININNPFVFK 313
Query: 315 HISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLAKT 374
HIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTLAK
Sbjct: 314 HISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKH 373
Query: 375 ILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANEMGR 434
I++EP+E+T M+G PL M V YISFSAH D QTS F+ L PP++ILVHG NEM R
Sbjct: 374 IMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMAR 433
Query: 435 LKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLV 491
LK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+K G+ VSG+LV
Sbjct: 434 LKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKKCSQGQRVSGILV 493
Query: 492 KKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEP-SVDEES 550
KK F+Y I++P DL ++ L+ + V Q IP++G F ++ S+L+ + VE + E+S
Sbjct: 494 KKNFSYHILSPSDLSNYTDLAMSTVKQTQAIPFTGPFPLLLSQLRHLTGDVEEIEMSEKS 553
Query: 551 GVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDATK 610
V V + +TV HE+ V L W ++P+NDM +D+V +VL + + PK A K
Sbjct: 554 TVK---VFNSITVIHENNL-VVLEWFANPLNDMYADAVTTVVLEVQSN-PK------AQK 602
Query: 611 IEEENEKKTE-KVMQALLNSLFGN------VKVGENGKLIINIDGNVAELNKESGEVE-- 661
+ EKK + V Q L +F + V + L +N+D A ++ E+ VE
Sbjct: 603 ALQPQEKKVDVNVFQNRLLKMFQDMFGEECVDFKDKNCLAVNVDEKTAFIDLETRTVEYE 662
Query: 662 ---SENEGLKERVRTAFRRIQSSVKPI 685
E++ L+E + A +R+ ++ P+
Sbjct: 663 EPNPEDDSLREMLELAVQRLYEAINPV 689
>UniRef100_UPI00001CF969 UPI00001CF969 UniRef100 entry
Length = 734
Score = 691 bits (1782), Expect = 0.0
Identities = 359/731 (49%), Positives = 477/731 (65%), Gaps = 63/731 (8%)
Query: 14 INRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPST 73
I E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+
Sbjct: 4 IPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE 63
Query: 74 VDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLY 133
+D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY
Sbjct: 64 IDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLY 123
Query: 134 DEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSRE 193
E D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+
Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQ 183
Query: 194 EDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYAL 253
EDRHL AAE P PD+ IIESTYG H+ R RE RF + +H +++GGR LIP +AL
Sbjct: 184 EDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFAL 243
Query: 254 GRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI--QNAKSNPF 311
GRAQELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I Q +NPF
Sbjct: 244 GRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPF 303
Query: 312 AFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTL 371
FKHIS L S+D F D+GPSVVMASPG +Q+GLSR+LF+ WC+DK+N +I GY VEGTL
Sbjct: 304 VFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELFESWCTDKRNGVIIAGYCVEGTL 363
Query: 372 AKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANE 431
AK I++EP+E+T M+G PL M V YISFSAH D QTS F+ L PP++ILVHG NE
Sbjct: 364 AKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNE 423
Query: 432 MGRLKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSG 488
M RLK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+K PE G+ VSG
Sbjct: 424 MARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQRVSG 483
Query: 489 LLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDE 548
+LVK+ F Y I++P DL ++ L+ + V Q IPY+G F ++ +L+++ VE +
Sbjct: 484 ILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFYLLYYQLQKLTGDVEELEIQ 543
Query: 549 ESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRD---------- 598
E P L V +TV E V L W ++P NDM +D+V ++L + +
Sbjct: 544 EK--PALKVFKSITVVQEPGM-VVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK 600
Query: 599 ------------------------LPKIVAESDATKIEEENEKKTEKVMQALL------- 627
LPK+V AT K+ ++ L+
Sbjct: 601 VSKKLEMHVYSKRLEVMLQDNFTILPKLVPNWKATVKYVRAAYKSAAILGTLVKLDFPSN 660
Query: 628 -------NSLFGN--VKVGENGKLIINIDGNVAELNKESGEVESE-----NEGLKERVRT 673
+FG V V ++ L + +DG A +N E+ VE E +E L+E V
Sbjct: 661 AKFLFTYRDIFGEDCVSVKDDSVLSVTVDGKTANINLETRAVECEEGSEDDESLREMVEL 720
Query: 674 AFRRIQSSVKP 684
A +R+ ++ P
Sbjct: 721 AAQRLYEALTP 731
>UniRef100_UPI000036112B UPI000036112B UniRef100 entry
Length = 672
Score = 688 bits (1775), Expect = 0.0
Identities = 344/679 (50%), Positives = 463/679 (67%), Gaps = 21/679 (3%)
Query: 17 ETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPSTVDV 76
E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+ +D+
Sbjct: 4 EESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDL 63
Query: 77 LLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLYDEQ 136
LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S DDMLY E
Sbjct: 64 LLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTET 123
Query: 137 DINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDR 196
D+ SM+KIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDR
Sbjct: 124 DLEESMEKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDR 183
Query: 197 HLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYALGRA 256
HL AAE P PD+ I ESTYG H+ R RE RF + +H +++ GR LIP +ALGRA
Sbjct: 184 HLMAAEIPSVKPDILITESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRA 243
Query: 257 QELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRIQNA--KSNPFAFK 314
QELLLILDEYW NHPEL +IPIYYAS LA+KC+ VY+TY +MND+I+ A +NPF FK
Sbjct: 244 QELLLILDEYWQNHPELHDIPIYYASSLARKCMAVYQTYINAMNDKIRKAININNPFVFK 303
Query: 315 HISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLAKT 374
HIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTLAK
Sbjct: 304 HISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKH 363
Query: 375 ILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANEMGR 434
I++EP E+T M+G L M V YISFSAH D QTS F+ L PP++ILVHG NEM R
Sbjct: 364 IMSEPDEITTMSGQKLALKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMAR 423
Query: 435 LKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLV 491
LK L+ ++ D + ++ P+N ++V + F +K+AK +G L ++ G+ VSG+LV
Sbjct: 424 LKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLTDRKCVQGQRVSGILV 483
Query: 492 KKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDEESG 551
K+ F Y I+ P DL ++ LS VTQ IPY+G ++ S+L+ + VE E +
Sbjct: 484 KRNFNYHIVTPSDLPNYTDLSVGTVTQTQAIPYTGPISLLVSQLRSLTGDVEQM--EGAS 541
Query: 552 VPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDATKI 611
+ + VT+ HE V L W + P+ DM +D V ++L + + +A K
Sbjct: 542 KITIRIFKNVTLVHEGGM-VLLEWIASPLTDMYADVVTTVILEVQ-------SNPNAQKF 593
Query: 612 EEENEKKTEKVM-----QALLNSLFGNVKVG-ENGKLIINIDGNVAELNKESGEVESENE 665
E N + + M + +L+ +FG V + GK+ + +DG ++ ++ V SE+E
Sbjct: 594 LEGNREILDSGMFVERLELMLHDMFGEDCVNFKEGKVTVTVDGVAVSIDTQTRAVCSEDE 653
Query: 666 GLKERVRTAFRRIQSSVKP 684
L+E V A R+ ++ P
Sbjct: 654 SLREMVEVAVHRLYDALSP 672
>UniRef100_Q86A79 Similar to Homo sapiens (Human). Cleavage and polyadenylation
specificity factor, 73 kDa subunit [Dictyostelium
discoideum]
Length = 774
Score = 688 bits (1775), Expect = 0.0
Identities = 354/734 (48%), Positives = 489/734 (66%), Gaps = 59/734 (8%)
Query: 6 KRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPY 65
KR GGT E +D L +TP+G+G+EVGRSCV + YKGK V+FDCG+HP YSG+ +LP+
Sbjct: 23 KRPLKGGT---EDDDILEITPIGSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPF 79
Query: 66 FDEI--DPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKV 123
FD I D +D+LL++HFHLDHAA++PYF+ KT FKGRVFMT+ TKAIY +LLSDYVKV
Sbjct: 80 FDSIESDIPDIDLLLVSHFHLDHAAAVPYFVGKTKFKGRVFMTHPTKAIYGMLLSDYVKV 139
Query: 124 SKVSVDD-MLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGV 182
S ++ DD ML+D+ D++RS++KIE + + Q VE NGI+ C+ AGHVLGAAMFM++IAGV
Sbjct: 140 SNITRDDDMLFDKSDLDRSLEKIEKVRYRQKVEHNGIKVTCFNAGHVLGAAMFMIEIAGV 199
Query: 183 RVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQ 242
++LYTGD+SR+EDRHL AETP DV IIESTYGVQ H+PR REKRFT +H + +
Sbjct: 200 KILYTGDFSRQEDRHLMGAETPPVKVDVLIIESTYGVQVHEPRLEREKRFTSSVHQVVER 259
Query: 243 GGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDR 302
G+ LIP +ALGRAQELLLILDEYW +P+L ++PIYYAS LAKKC+ VY TY MNDR
Sbjct: 260 NGKCLIPVFALGRAQELLLILDEYWIANPQLHHVPIYYASALAKKCMGVYRTYINMMNDR 319
Query: 303 I--QNAKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSC 360
+ Q SNPF FKHI + I+ F D GP V MASPG LQSGLSRQLF+ WCSDK+N
Sbjct: 320 VRAQFDVSNPFEFKHIKNIKGIESFDDRGPCVFMASPGMLQSGLSRQLFERWCSDKRNGI 379
Query: 361 VIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPP 420
VIPGY VEGTLAK I++EP E+T ++ ++ PL++ V Y+SFSAH+D QTS F++E+ PP
Sbjct: 380 VIPGYSVEGTLAKHIMSEPAEITRLDNVNVPLNLTVSYVSFSAHSDFLQTSEFIQEIQPP 439
Query: 421 NIILVHGAANEMGRLKQKLMTQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTP 480
+++LVHG ANEM RL+Q L+ +F + +LTPKN SV + F +K+AKT+G + P
Sbjct: 440 HVVLVHGDANEMSRLRQSLVAKF--KTINVLTPKNAMSVALEFRPEKVAKTLGSIITNPP 497
Query: 481 EVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYE 540
+ + + G+LV K FT+ I++ D+H ++ L T + Q++T+P++ + ++ S L+QIYE
Sbjct: 498 KQNDIIQGILVTKDFTHHILSASDIHNYTNLKTNIIKQKLTLPFAQTYHILISTLEQIYE 557
Query: 541 SVEPSVDEESG----VPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNI- 595
+ S + G P + +++ + + + + L W S+ +NDM+ DS++AL+ I
Sbjct: 558 QIIESTESTGGGGNEKPTITIYNEIKLIYNIGVSIILEWNSNTVNDMICDSIIALISQIE 617
Query: 596 ---------NRDLPKIVAESDATKIEEENEKKTEKVMQ---------------------- 624
N + I + + TK + E EK+ EK Q
Sbjct: 618 LNPLSIKVRNPNFNNIDEKEEITKDDIEKEKEKEKEQQDGDDDDDDEIQIKVVSRKSRKL 677
Query: 625 -----------ALLNSLFGNVKVGENGKLII--NIDGNVAELNKESGEVESENEGLKERV 671
LL +GN KV EN LI+ N+D A ++ E+ VES ++ LK+++
Sbjct: 678 SNKLNTITEVKLLLEQQYGNFKVDENDPLILHFNLDNQKAIIHLETLTVESLDQILKQKI 737
Query: 672 RTAFRRIQSSVKPI 685
+ +RI SV PI
Sbjct: 738 ENSIKRIILSVSPI 751
>UniRef100_UPI00000151D3 UPI00000151D3 UniRef100 entry
Length = 679
Score = 681 bits (1757), Expect = 0.0
Identities = 346/685 (50%), Positives = 469/685 (67%), Gaps = 26/685 (3%)
Query: 17 ETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPSTVDV 76
E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+ +D+
Sbjct: 4 EESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDL 63
Query: 77 LLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLYDEQ 136
LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S D+MLY E
Sbjct: 64 LLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADEMLYAET 123
Query: 137 DINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDR 196
D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDR
Sbjct: 124 DLEESMDKIETINFHEVREVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDR 183
Query: 197 HLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYALGRA 256
HL AAE P PD+ IIESTYG H+ R RE RF + +H +++ GR LIP +ALGRA
Sbjct: 184 HLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRA 243
Query: 257 QELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRIQNA--KSNPFAFK 314
QELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I+ A +NPF FK
Sbjct: 244 QELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKAININNPFVFK 303
Query: 315 HISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLAKT 374
HIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTLAK
Sbjct: 304 HISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKH 363
Query: 375 ILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANEMGR 434
I++EP+E+T M+G L M V YISFSAH D QTS F+ L PP++ILVHG NEM R
Sbjct: 364 IMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMAR 423
Query: 435 LKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLV 491
LK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+ G+ VSG+LV
Sbjct: 424 LKAALIREYEDNDQVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADNKCVQGQRVSGILV 483
Query: 492 KKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQIYESVEPSVDEESG 551
KK F Y I+ P DL +++L+ + V Q IP++G + ++ L+ + VE E
Sbjct: 484 KKNFNYHILNPSDLSTYTELAMSTVKQSQAIPFTGPYSLLVCHLRNLTGDVEELDGTEKN 543
Query: 552 VPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLNINRDLPKIVAESDATKI 611
L V VT+ HE V L W ++PINDM +D++ +VL + + PK + +
Sbjct: 544 T--LKVFKSVTLIHEVGM-VLLEWIANPINDMYADAIATVVLEVQSN-PKAL-----KVM 594
Query: 612 EEENEKKTEKVMQA----LLNSLFGN--VKVGENGKLIINIDGNVAELNKESGEV----- 660
E +N V QA +L +FG V++ ++ + + +DG ++ ++ V
Sbjct: 595 ETQNAIMDITVFQARLGVMLQEMFGEECVELTDDKNVSVTVDGKTILISLDTRSVCYVDD 654
Query: 661 -ESENEGLKERVRTAFRRIQSSVKP 684
+E++ L+E V A +R+ ++ P
Sbjct: 655 EGTEDDSLREMVDLAVQRLYDALNP 679
>UniRef100_Q5R428 Hypothetical protein DKFZp459J042 [Pongo pygmaeus]
Length = 647
Score = 669 bits (1726), Expect = 0.0
Identities = 341/651 (52%), Positives = 454/651 (69%), Gaps = 18/651 (2%)
Query: 48 LFDCGIHPGYSGMAALPYFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTY 107
+ DCGIHPG GM ALPY D IDP+ +D+LLI+HFHLDH +LP+FL+KT+FKGR FMT+
Sbjct: 1 MLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTH 60
Query: 108 ATKAIYKLLLSDYVKVSKVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAG 167
ATKAIY+ LLSDYVKVS +S DDMLY E D+ SMDKIE I+FH+ EV GI+FWCY AG
Sbjct: 61 ATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAG 120
Query: 168 HVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHT 227
HVLGAAMFM++IAGV++LYTGD+SR+EDRHL AAE P PD+ IIESTYG H+ R
Sbjct: 121 HVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREE 180
Query: 228 REKRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKK 287
RE RF + +H +++GGR LIP +ALGRAQELLLILDEYW NHPEL +IPIYYAS LAKK
Sbjct: 181 REARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKK 240
Query: 288 CLTVYETYTLSMNDRI--QNAKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLS 345
C+ VY+TY +MND+I Q +NPF FKHIS L S+D F D+GPSVVMASPG +QSGLS
Sbjct: 241 CMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLS 300
Query: 346 RQLFDMWCSDKKNSCVIPGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHA 405
R+LF+ WC+DK+N +I GY VEGTLAK I++EP+E+T M+G PL M V YISFSAH
Sbjct: 301 RELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHT 360
Query: 406 DSAQTSAFLEELNPPNIILVHGAANEMGRLKQKLMTQFADR---NTKILTPKNCQSVEMY 462
D QTS F+ L PP++ILVHG NEM RLK L+ ++ D + ++ P+N ++V +
Sbjct: 361 DYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLN 420
Query: 463 FNSQKMAKTIGKLAEKTPEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITI 522
F +K+AK +G LA+K PE G+ VSG+LVK+ F Y I++P DL ++ L+ + V Q I
Sbjct: 421 FRGEKLAKVMGFLADKKPEQGQRVSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAI 480
Query: 523 PYSGAFCVIQSRLKQIYESVEPSVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPIND 582
PY+G F ++ +L+++ VE +E P L V +TV E V L W ++P ND
Sbjct: 481 PYTGPFNLLYYQLQKLTGDVEELEIQEK--PALKVFKNITVIQEPGM-VVLEWLANPSND 537
Query: 583 MVSDSVVALVLNINRDLPKIVAESDATKIEEENEKKT-EKVMQALLNSLFGN--VKVGEN 639
M +D+V ++L + + PKI + K+ ++ E K ++ +L +FG + V ++
Sbjct: 538 MYADTVTTVILEVQSN-PKI-RKGAVQKVSKKLEMHVYSKRLEIMLQDIFGEDCISVKDD 595
Query: 640 GKLIINIDGNVAELNKESGEVESE-----NEGLKERVRTAFRRIQSSVKPI 685
L + +DG A LN E+ VE E +E L+E V A +R+ ++ P+
Sbjct: 596 SILSVTVDGKTANLNLETRTVECEEGSEDDESLREMVELAAQRLYEALTPV 646
>UniRef100_Q7PX56 ENSANGP00000013989 [Anopheles gambiae str. PEST]
Length = 690
Score = 664 bits (1713), Expect = 0.0
Identities = 346/692 (50%), Positives = 468/692 (67%), Gaps = 20/692 (2%)
Query: 5 KKRESNGGTINRETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALP 64
+KR SNG + +E D +++ PLGAG EVGRSC+ + +KGK ++ DCGIHPG SGM ALP
Sbjct: 3 QKRASNGARLLKEESDLMVIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALP 62
Query: 65 YFDEIDPSTVDVLLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVS 124
+ D ID +D+L I+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ +LSDY+KVS
Sbjct: 63 FVDLIDADQIDLLFISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWMLSDYIKVS 122
Query: 125 KVSVDDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRV 184
+S D MLY E D+ SM+KIE I+FH+ ++ G+RFW Y AGHVLGAAMFM++IAG+RV
Sbjct: 123 NISTDQMLYTEADLEASMEKIETINFHEERDILGVRFWAYNAGHVLGAAMFMIEIAGIRV 182
Query: 185 LYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGG 244
LYTGD+SR+EDRHL AAE P PDV I ESTYG H+ R RE RFT ++ + QGG
Sbjct: 183 LYTGDFSRQEDRHLMAAEIPAMRPDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGG 242
Query: 245 RVLIPAYALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI- 303
R LIP +ALGRAQELLLILDEYW+ +P+LQ IPIYYAS LAKKC+ VY+TY +MND+I
Sbjct: 243 RCLIPVFALGRAQELLLILDEYWSQNPDLQEIPIYYASSLAKKCMAVYQTYINAMNDKIR 302
Query: 304 -QNAKSNPFAFKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVI 362
Q A +NPF F+ IS L ID F DVGP VVMASPG +QSGLSR+LF+ WC+D KN +I
Sbjct: 303 RQIAINNPFVFRFISNLKGIDHFDDVGPCVVMASPGMMQSGLSRELFESWCTDPKNGVII 362
Query: 363 PGYVVEGTLAKTILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNI 422
GY VEGTLAKTIL EP+E+T MNG PL+M V YISFSAH D QTS F+ L P ++
Sbjct: 363 AGYCVEGTLAKTILFEPEEITSMNGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLQPTHV 422
Query: 423 ILVHGAANEMGRLKQKLMTQFADRNTKIL----TPKNCQSVEMYFNSQKMAKTIGKLAEK 478
+LVHG NEMGRLK LM ++ + N K+ P+N Q VE+YF +K AK +G LA
Sbjct: 423 VLVHGEQNEMGRLKSALMREY-EANPKVQITFHNPRNTQPVELYFRGEKTAKVMGTLAVG 481
Query: 479 TPEVGETVSGLLVKKGFTYQIMAPDDLHVFSQLSTANVTQRITIPYSGAFCVIQSRLKQI 538
P + +SG+LVK+ F Y ++AP DL ++ +S + VTQ+ +I + G+ V++ L++
Sbjct: 482 EPADCQRLSGVLVKREFKYHLLAPTDLSRYTDMSMSIVTQKQSIHWPGSTVVLKLLLERA 541
Query: 539 ---YESVEPSVDEES-GVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSVVALVLN 594
VE + E S L V D + + + K V+L W + P+NDM +D V+A +L
Sbjct: 542 GGPGSVVETPIPEGSTATARLRVCDCIDLTADG-KIVTLEWQATPVNDMYADMVMACLLQ 600
Query: 595 INRDLPKIVAESDATKIEEENEKKTEKVMQALLNSLFGN---VKVGENGKLIINIDGNVA 651
+ ++ T++ + +EK + + L LFG K ++ +L + + G
Sbjct: 601 CDIAGSSVI----GTRMSKVDEKHYQDCLIETLQELFGEQSMEKFIDSDRLTVTVRGKRI 656
Query: 652 ELNKESGEVE-SENEGLKERVRTAFRRIQSSV 682
+N ++ EVE ++E L + V R+++ S+
Sbjct: 657 VINLQTHEVECDQDEQLYQTVYMTVRKLRQSL 688
>UniRef100_UPI00002DAB97 UPI00002DAB97 UniRef100 entry
Length = 730
Score = 658 bits (1698), Expect = 0.0
Identities = 341/677 (50%), Positives = 451/677 (66%), Gaps = 52/677 (7%)
Query: 17 ETEDQLIVTPLGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDPSTVDV 76
E DQL++ PLGAG EVGRSC+ + +KG+ ++ DCGIHPG GM ALPY D IDP+ +D+
Sbjct: 4 EESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDL 63
Query: 77 LLITHFHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVDDMLYDEQ 136
LLI+HFHLDH +LP+FL+KT+FKGR FMT+ATKAIY+ LLSDYVKVS +S D+MLY E
Sbjct: 64 LLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADEMLYAET 123
Query: 137 DINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDR 196
D+ SMDKIE I+FH+ EV GI+FWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDR
Sbjct: 124 DLEESMDKIETINFHEVREVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDR 183
Query: 197 HLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYALGRA 256
HL AAE P PD+ IIESTYG H+ R RE RF + +H +++ GR LIP +ALGRA
Sbjct: 184 HLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNREGRCLIPVFALGRA 243
Query: 257 QELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRIQNA--KSNPFAFK 314
QELLLILDEYW NHPEL +IPIYYAS LAKKC+ VY+TY +MND+I+ A +NPF FK
Sbjct: 244 QELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKAININNPFVFK 303
Query: 315 HISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLAKT 374
HIS L S+D F D+GPSVVMASPG +QSGLSR+LF+ WC+DK+N +I GY VEGTLAK
Sbjct: 304 HISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKH 363
Query: 375 ILNEPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANEMGR 434
I++EP+E+T M+G L M V YISFSAH D QTS F+ L PP++ILVHG NEM R
Sbjct: 364 IMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMAR 423
Query: 435 LKQKLMTQFADR---NTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVGETVSGLLV 491
LK L+ ++ D + ++ P+N ++V + F +K+AK +G LA+ G+ VSG+LV
Sbjct: 424 LKAALIREYEDNEQVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADNRCVQGQRVSGILV 483
Query: 492 KKGFTYQIMAPDDLH-----------------------VFSQLSTANVTQRITIPYSGAF 528
KK F Y I+ P DL +++L+ + V Q IP++G +
Sbjct: 484 KKNFNYHILNPSDLSSESSFGVRTLWSGKRESCRACFTAYTELAMSTVKQSQAIPFTGPY 543
Query: 529 CVIQSRLKQIYESVEPSVDEESGVPMLLVHDRVTVKHESEKHVSLHWASDPINDMVSDSV 588
++ L+ + VE E L V VT+ H+ V L W ++P+NDM +D++
Sbjct: 544 SLLVCHLRNLTGDVEELDGTEKNT--LKVFKTVTLTHQVGM-VLLEWIANPLNDMYADAI 600
Query: 589 VALVLNINRDLPKIVAESDATKIEEENEKKTEKVMQA----LLNSLFG----------NV 634
+VL + + PK + +E +N V QA +L +FG NV
Sbjct: 601 ATVVLEVQSN-PKAL-----KVMETQNAIMDVTVFQARLGLMLQEMFGEECVDFTDHKNV 654
Query: 635 KVGENGKLI-INIDGNV 650
V +GK I +++D V
Sbjct: 655 SVAVDGKTIHVSLDTRV 671
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.317 0.134 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,116,333,601
Number of Sequences: 2790947
Number of extensions: 47145794
Number of successful extensions: 137723
Number of sequences better than 10.0: 763
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 436
Number of HSP's that attempted gapping in prelim test: 135851
Number of HSP's gapped (non-prelim): 996
length of query: 690
length of database: 848,049,833
effective HSP length: 134
effective length of query: 556
effective length of database: 474,062,935
effective search space: 263578991860
effective search space used: 263578991860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)
Medicago: description of AC134322.16