Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC129091.5 - phase: 0 /pseudo
         (980 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q8LNH8 Putative glycine-rich protein [Oryza sativa]         716  0.0
UniRef100_Q9M0Y7 Hypothetical protein AT4g04920 [Arabidopsis tha...   654  0.0
UniRef100_Q7Q6D5 ENSANGP00000013473 [Anopheles gambiae str. PEST]      38  1.7

>UniRef100_Q8LNH8 Putative glycine-rich protein [Oryza sativa]
          Length = 1291

 Score =  716 bits (1849), Expect = 0.0
 Identities = 393/736 (53%), Positives = 485/736 (65%), Gaps = 115/736 (15%)

Query: 357  LRPVVLNPIFGS---MDGNPPMRTVWESKVDISIPATDD--------------------- 392
            ++PVVL+PIFGS     G PP +TVW ++V+ SIP ++D                     
Sbjct: 511  VQPVVLHPIFGSPANFGGQPPTQTVWSTRVNKSIPPSEDLKNPQSYVPMPTTSDERSSSE 570

Query: 393  ----KSKGIHFNPFDLPKYLGTLARVVFSAQGGEIAVAFFQGRVRIFSGSNFEPVTNYEI 448
                ++  + F+P+DLP  +  LA++V+SA GGE+AVAF +G V IFSG NFE V +Y +
Sbjct: 571  CSVDRANRLSFDPYDLPNDVRQLAQIVYSAHGGEVAVAFLRGGVHIFSGPNFEQVDSYHV 630

Query: 449  NVGSSISVPAFSATSCCSASVWHDTSKGEAMLKIIRVLPPPFPIGQEKATSSTWEHAISE 508
            NVGS+I+ PAFS++ CC ASVWHDT K   +LKIIRVLPP     Q K +S+ WE AI++
Sbjct: 631  NVGSAIAPPAFSSSGCCLASVWHDTLKDRTILKIIRVLPPAILNAQTKVSSAVWERAIAD 690

Query: 509  -RFWFSLLVGVDWWDVVGCTQRAAEEGIVSVNGVIAVLDADFHSLPTAQHRQQYCLGLDM 567
             RFW+SLL GVDWWD VGCTQ AAE+GIVS+N VIA+LDADFH LPT Q RQQ+C  LD 
Sbjct: 691  SRFWWSLLAGVDWWDAVGCTQSAAEDGIVSLNSVIALLDADFHCLPTIQQRQQHCPNLDR 750

Query: 568  IKCRLLVGSNAQEVRATVLDMQARVLLDMLGKGIESALINPSALLPDPWQASEEILSNFD 627
            IKCRLL G+NAQ+VRA VLDMQAR+LLDMLGKGIESALINPS LLP+PWQAS ++LS+  
Sbjct: 751  IKCRLLEGTNAQDVRALVLDMQARLLLDMLGKGIESALINPSTLLPEPWQASSDMLSSIG 810

Query: 628  MEEMAVEPELTPCIQAYVDSVIDLASHLITRLRHYAKIFRTLANQAVTVASG-------- 679
             ++M V+P L   IQ YVD+V+DLASH ITRLR YA   RTLA+ AV  +SG        
Sbjct: 811  PDKMTVDPALLLSIQGYVDAVLDLASHFITRLRRYASFCRTLASHAVGASSGSGNSRNMV 870

Query: 680  ---------------------STSG--------------------GVPNLTLNPSISGPS 698
                                 ST+G                    G  N   NP ISG S
Sbjct: 871  TSPTNSSPSPSTNQGNQGGVASTTGSSQMQEWVQGAIAKISNNTDGAANAAPNP-ISGRS 929

Query: 699  SLMLISINTGTFPGTPAVRLIGDCHFLHRLCQLLFFCFFFKRSQLARYKSGLRRTAETSL 758
            S M ISINTGTFPGTPAVRLIGDCHFLHRLCQLL FC  F+R Q  R  +  ++++++S+
Sbjct: 930  SFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCLLFRRRQSPRIPANAQKSSDSSM 989

Query: 759  ----------------VRS-------NDGQTGRDRQIVPGSKGGEEPSPG--PVRLGNGN 793
                            VRS        DG T R + +  G+KG EE   G    R+G+GN
Sbjct: 990  QKQHLMNSKTEDNTLAVRSGLGAAKLEDGTTSRGQMV--GAKGAEENPVGNKSARIGSGN 1047

Query: 794  AGQGYSVEEVKVIFQVLLDLCRRTSGLQHPLPVSQVGSSNIQVQLHYIEGSYTVLPEVVE 853
            AGQGY+ +EVKV+F +L+DLC+RT+ LQHPLP SQVGSSNI ++LHYI+G+YTVLPEVVE
Sbjct: 1048 AGQGYTSDEVKVLFLILVDLCKRTATLQHPLPSSQVGSSNIIIRLHYIDGNYTVLPEVVE 1107

Query: 854  ASLGPYMQNMPRLGDADDTGLLLRELQLHPPAEEWHQLNMFVRPCTDSN-----DTPKPF 908
            ASLGP+MQNMPR   AD  GLLLREL+L PPAEEWH+ NMF  P ++ +     D  +  
Sbjct: 1108 ASLGPHMQNMPRPRGADAAGLLLRELELQPPAEEWHRRNMFGGPWSEPDDLGPLDNTRQL 1167

Query: 909  RSNPLDSRSL----ESNDIDYGTNGLRPKKRRMIERDAAFGLNTSLGLGAYLGIMGSRRD 964
            + N   +R L    E  D  +G   L P+KRR+ ERDAAFGL TS+GLG++LG+MGSRRD
Sbjct: 1168 KINGSTNRHLSDMEEDGDSSFGIQNLWPRKRRLSERDAAFGLKTSVGLGSFLGVMGSRRD 1227

Query: 965  VITTSWKTGLEGVWYK 980
            VIT  WKTGLEG WYK
Sbjct: 1228 VITAVWKTGLEGEWYK 1243



 Score =  210 bits (534), Expect = 2e-52
 Identities = 108/181 (59%), Positives = 129/181 (70%), Gaps = 5/181 (2%)

Query: 25  EEVEAGTVFDISLEQSPSTSLHKITVHESMRSNFSAVAWCAKLNVIACATETCVNGIPRS 84
           ++    TVF I L+Q PS+  HK+ V E  R NFSAVAWC KLN IACA+ETC   IP S
Sbjct: 109 QQASPATVFRIRLKQPPSSLRHKMRVPELCR-NFSAVAWCGKLNAIACASETCAR-IPSS 166

Query: 85  SVNPWFWIPIHIVIPERPTEIAAFNVVADSSLDSVQSIQWSPICCPRALLIANFQGRVTI 144
           + +P FWIPIHI+ PERPTE + FNV ADS  D VQ I+WSP  CPRALL+ANF GR+TI
Sbjct: 167 NSSPPFWIPIHILNPERPTECSVFNVKADSPRDFVQFIEWSPRSCPRALLVANFHGRITI 226

Query: 145 WTQPSRGPPNLVIDTNCWQREHEWRQETAVVTKWLSGASP---LDGPSFSVSVLYHNQER 201
           WTQP++GP NLV D + WQ EHEWRQ+ +VVTKWLSG SP   L   S + S L   +E+
Sbjct: 227 WTQPTKGPTNLVRDASSWQCEHEWRQDLSVVTKWLSGISPYRWLPANSSTSSNLKTFEEK 286

Query: 202 F 202
           F
Sbjct: 287 F 287


>UniRef100_Q9M0Y7 Hypothetical protein AT4g04920 [Arabidopsis thaliana]
          Length = 1196

 Score =  654 bits (1686), Expect = 0.0
 Identities = 384/741 (51%), Positives = 456/741 (60%), Gaps = 120/741 (16%)

Query: 357  LRPVVLNPIFGS----MDGNPPMRTVWESKVDISIPAT---------------------- 390
            ++PVVL+ IFG+      G  P +TVW S+VD+SIP T                      
Sbjct: 439  VQPVVLHQIFGNPTSNFGGQVPTQTVWVSRVDMSIPPTKDFKNHQVAAAGPSVDAPKEPD 498

Query: 391  --DDKSKGIHFNPFDLPKYLGTLARVVFSAQGGEIAVAFFQGRVRIFSGSNFEPVTNYEI 448
              D+K+  + F+PFDLP  + TLAR+V+SA GGEIA+AF +G V IFSG  F PV NY+I
Sbjct: 499  SGDEKANKVVFDPFDLPSDIRTLARIVYSAHGGEIAIAFLRGGVHIFSGPTFSPVENYQI 558

Query: 449  NVGSSISVPAFSATSCCSASVWHDTSKGEAMLKIIRVLPPPFPIGQEKATSSTWEHAISE 508
            NVGS+I+ PAFS TSCCSASVWHD +K  AMLKIIRVLPP  P  Q K   STWE AI+E
Sbjct: 559  NVGSAIAAPAFSPTSCCSASVWHDAAKDCAMLKIIRVLPPALPRNQSKVDQSTWERAIAE 618

Query: 509  RFWFSLLVGVDWWDVVGCTQRAAEEGIVSVNGVIAVLDADFHSLPTAQHRQQYCLGLDMI 568
            RFW+SLLVGVDWWD VGCTQ AAE+GIVS+N VIAV+DADFHSLP+ QHRQQY   LD I
Sbjct: 619  RFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVMDADFHSLPSTQHRQQYGPNLDRI 678

Query: 569  KCRLLVGSNAQEVRATVLDMQARVLLDMLGKGIESAL--------------------INP 608
            KCRLL G+NAQEVRA VLDMQAR+LLDMLGKGIESAL                    INP
Sbjct: 679  KCRLLEGTNAQEVRAMVLDMQARLLLDMLGKGIESALVNPSALVFEPWRVDGETITGINP 738

Query: 609  SALLPDPWQASEEILSNFDMEEMAVEPELTPCIQAYVDSVIDLASHL-----------IT 657
             A+  DP   S   +  +    + +       ++ Y      LASH            +T
Sbjct: 739  EAMAVDPALVSS--IQAYVDAVLDLASHFITRLRRYASFCRTLASHAASAGTGSNRNNVT 796

Query: 658  RLRHYA------KIF-------------RTLANQAVTVASGST---------------SG 683
                 A      ++F              T    A T +SGS+               S 
Sbjct: 797  SPTQNASSPATPQVFPDKSLYLAVGQPTTTTTTTATTNSSGSSHVQAWMQGAIAKISSSN 856

Query: 684  GVPNLTLNPSISGPSSLMLISINTGTFPGTPAVRLIGDCHFLHRLCQLLFFCFFFKRSQL 743
               N T +P ISG  + M ISINTGTFPGTPAVRLIGDCHFLHRLCQLL FCF  + S+ 
Sbjct: 857  DGSNSTASP-ISGSPTFMPISINTGTFPGTPAVRLIGDCHFLHRLCQLLLFCFLQRSSRF 915

Query: 744  ----ARYKSGLRRTAETS-------------LVRSNDGQTGRDRQIVPGSKGGEEPSPGP 786
                A   S   +T  TS             L R  D Q  R  Q+  G KG +E S   
Sbjct: 916  PQRNADVSSQKLQTGATSKLEEVNSAKPTPALNRIEDAQGFRGAQLGTGVKGIDENSART 975

Query: 787  VRLGNGNAGQGYSVEEVKVIFQVLLDLCRRTSGLQHPLPVSQVGSSNIQVQLHYIEGSYT 846
             ++G+GNAGQGY+ EEV+V+F +L+DLC+RTSGL HPLP SQVGS NIQV+LHYI+G+YT
Sbjct: 976  TKMGSGNAGQGYTYEEVRVLFHILMDLCKRTSGLAHPLPGSQVGSGNIQVRLHYIDGNYT 1035

Query: 847  VLPEVVEASLGPYMQNMPRLGDADDTGLLLRELQLHPPAEEWHQLNMFVRPCTDSND--- 903
            VLPEVVEA+LGP+MQNMPR   AD  GLLLREL+LHPP+EEWH+ N+F  P ++  D   
Sbjct: 1036 VLPEVVEAALGPHMQNMPRPRGADAAGLLLRELELHPPSEEWHRRNLFGGPGSEPEDMIL 1095

Query: 904  -TPKPFRSNPLDSRSLESNDIDYGTN---GLRPKKRRMIERDAAFGLNTSLGLGAYLGIM 959
                   SN LD      + I  G N    L P+KRRM ERDAAFG NTS+GLGAYLGIM
Sbjct: 1096 TDDVSKLSNSLDLPDTNFSGICDGYNRVHSLWPRKRRMSERDAAFGSNTSVGLGAYLGIM 1155

Query: 960  GSRRDVITTSWKTGLEGVWYK 980
            GSRRDV+T +WKTGLEGVWYK
Sbjct: 1156 GSRRDVVTATWKTGLEGVWYK 1176



 Score =  219 bits (559), Expect = 2e-55
 Identities = 116/207 (56%), Positives = 141/207 (68%), Gaps = 6/207 (2%)

Query: 6   ESEAEAEAAATVNDPMMEEEEVEAGTVFDISLEQSPSTSLHKITVHESMRSNFSAVAWCA 65
           + E E + +++ N   ME + V   TVF + L+Q  S  LHK++V E  R NFSAVAWC 
Sbjct: 64  DGEKEDDNSSSSN---MEIDPVSPATVFCVKLKQPNSNLLHKMSVPELCR-NFSAVAWCG 119

Query: 66  KLNVIACATETCVNGIPRSSVNPWFWIPIHIVIPERPTEIAAFNVVADSSLDSVQSIQWS 125
           KLN IACA+ETC   IP S  N  FWIPIHI+IPERPTE A FNVVADS  DSVQ I+WS
Sbjct: 120 KLNAIACASETCAR-IPSSKANTPFWIPIHILIPERPTECAVFNVVADSPRDSVQFIEWS 178

Query: 126 PICCPRALLIANFQGRVTIWTQPSRGPPNLVIDTNCWQREHEWRQETAVVTKWLSGASPL 185
           P  CPRALLIANF GR+TIWTQP++G  NLV D   WQ EHEWRQ+ AVVTKWL+GASP 
Sbjct: 179 PTSCPRALLIANFHGRITIWTQPTQGSANLVHDATSWQCEHEWRQDIAVVTKWLTGASPW 238

Query: 186 DGPSFSVSVLYHNQER-FNFIGPKGLL 211
                S +  + + ++     GP G++
Sbjct: 239 PSNQGSTAPKWFSTKKGLLGAGPSGIM 265


>UniRef100_Q7Q6D5 ENSANGP00000013473 [Anopheles gambiae str. PEST]
          Length = 357

 Score = 37.7 bits (86), Expect = 1.7
 Identities = 28/108 (25%), Positives = 48/108 (43%), Gaps = 4/108 (3%)

Query: 404 LPKYLGTLARVVFSAQGGEIAVAFFQGRV-RIFSGSNFEPVTNYEINVGSSISVPAFSAT 462
           +P +   LA + FS  G EIA A  +G V R+FS S+   +  +   V   +S+ + + +
Sbjct: 178 IPAHDSPLAAIAFSQIGTEIATASEKGTVIRVFSVSDGSKLFEFRRGVKRCVSIASLAFS 237

Query: 463 SCCSASVWHDTSKGEAMLKIIRVLPPPFPIGQEKATSSTWEHAISERF 510
           +C         ++   + K+ RV P       E+     W   IS+ F
Sbjct: 238 TCSKYLCCSSNTETVHVFKLERVSP---ETNDEQGAGEAWYGKISKAF 282


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.327    0.141    0.447 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,635,883,042
Number of Sequences: 2790947
Number of extensions: 69682882
Number of successful extensions: 183200
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 183179
Number of HSP's gapped (non-prelim): 9
length of query: 980
length of database: 848,049,833
effective HSP length: 137
effective length of query: 843
effective length of database: 465,690,094
effective search space: 392576749242
effective search space used: 392576749242
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 80 (35.4 bits)


Medicago: description of AC129091.5