BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126009.3 - phase: 0 /pseudo
(60 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q7F0P9 Putative blue copper protein [Oryza sativa] 54 8e-07
UniRef100_Q852J1 Putative blue copper-binding protein [Oryza sat... 54 1e-06
UniRef100_O82081 Uclacyanin I [Arabidopsis thaliana] 53 2e-06
UniRef100_Q6Z7U7 Putative Blue copper protein [Oryza sativa] 51 9e-06
UniRef100_Q41001 Blue copper protein precursor [Pisum sativum] 50 1e-05
UniRef100_Q69QA7 Putative blue copper protein [Oryza sativa] 49 3e-05
UniRef100_Q7X7Z3 OSJNBa0079A21.5 protein [Oryza sativa] 49 3e-05
UniRef100_Q6K4A7 Hypothetical protein OJ1595_D08.10 [Oryza sativa] 49 3e-05
UniRef100_Q7F1H3 Blue copper-binding protein-like [Oryza sativa] 49 3e-05
UniRef100_Q9LY37 Stellacyanin (Uclacyanin 3)-like protein [Arabi... 48 6e-05
UniRef100_Q96403 Stellacyanin [Cucumis sativus] 47 1e-04
UniRef100_Q8LED5 Blue copper protein, putative [Arabidopsis thal... 47 1e-04
UniRef100_Q852J0 Putative blue copper-binding protein [Oryza sat... 47 1e-04
UniRef100_Q9ZTU7 Blue copper-binding protein homolog [Triticum a... 47 1e-04
UniRef100_Q9LUM8 Blue copper-binding protein-like [Arabidopsis t... 47 1e-04
UniRef100_Q949E8 Uclacyanin 3-like protein [Oryza sativa] 47 1e-04
UniRef100_Q8VY59 Blue copper protein, putative [Arabidopsis thal... 47 2e-04
UniRef100_Q6H8G6 Putative uclacyanin 3 [Oryza sativa] 47 2e-04
UniRef100_Q70DK2 Blue copper binding protein [Hordeum vulgare va... 47 2e-04
UniRef100_Q9LK33 Arabidopsis thaliana genomic DNA, chromosome 3,... 46 2e-04
>UniRef100_Q7F0P9 Putative blue copper protein [Oryza sativa]
Length = 168
Score = 54.3 bits (129), Expect = 8e-07
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1 MASSRVVLILSISMV-LLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
MAS +V+L+ +S V LL ++ ATD+ VGD GWT+++ T WA K F++GD L
Sbjct: 1 MASRQVLLLAIVSAVALLPAMVSATDYTVGDGHGWTLEYPSTNWADGKSFQIGDKL 56
>UniRef100_Q852J1 Putative blue copper-binding protein [Oryza sativa]
Length = 172
Score = 53.5 bits (127), Expect = 1e-06
Identities = 25/59 (42%), Positives = 39/59 (65%), Gaps = 4/59 (6%)
Query: 1 MASSRVVLI----LSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
MAS +++ + ++++++L + A AT+H+VGD GW + FDY WA K FRVGD L
Sbjct: 1 MASKQMLAVAAAAVALAVLLPARGAAATEHMVGDGNGWILGFDYAAWAATKQFRVGDTL 59
>UniRef100_O82081 Uclacyanin I [Arabidopsis thaliana]
Length = 261
Score = 52.8 bits (125), Expect = 2e-06
Identities = 23/55 (41%), Positives = 32/55 (57%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
MAS +++I+S+ L + +ATDH +G GWTV WA + F VGDNL
Sbjct: 1 MASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNL 55
>UniRef100_Q6Z7U7 Putative Blue copper protein [Oryza sativa]
Length = 246
Score = 50.8 bits (120), Expect = 9e-06
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 10 LSISMVLLS---SVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
L+I+ +LL+ S A AT + VGD GWT+ DYT WA K F+VGD+L
Sbjct: 9 LTIAALLLAACASSAAATSYTVGDASGWTIGVDYTSWAGSKSFKVGDSL 57
>UniRef100_Q41001 Blue copper protein precursor [Pisum sativum]
Length = 189
Score = 50.4 bits (119), Expect = 1e-05
Identities = 21/53 (39%), Positives = 35/53 (65%)
Query: 3 SSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
S+ +VL ++++ ++ ++AT + VGD GW + DY+ WA DK F VGD+L
Sbjct: 4 SNALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSL 56
>UniRef100_Q69QA7 Putative blue copper protein [Oryza sativa]
Length = 198
Score = 49.3 bits (116), Expect = 3e-05
Identities = 26/56 (46%), Positives = 36/56 (63%), Gaps = 3/56 (5%)
Query: 1 MASS-RVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
MASS +V +L +S +++ A AT + VGD GW + DYT WA DK F++GD L
Sbjct: 1 MASSLALVALLLVSCAVVA--AAATKYTVGDTSGWAMGADYTTWASDKKFKMGDTL 54
>UniRef100_Q7X7Z3 OSJNBa0079A21.5 protein [Oryza sativa]
Length = 181
Score = 49.3 bits (116), Expect = 3e-05
Identities = 19/48 (39%), Positives = 30/48 (61%)
Query: 8 LILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
+++++ + ++ A A D+ VGD GWT DYT WA+ K F +GD L
Sbjct: 8 VLVAVLLAAAAAPASAKDYTVGDSSGWTTGVDYTAWARGKTFNIGDTL 55
>UniRef100_Q6K4A7 Hypothetical protein OJ1595_D08.10 [Oryza sativa]
Length = 152
Score = 48.9 bits (115), Expect = 3e-05
Identities = 25/55 (45%), Positives = 33/55 (59%), Gaps = 1/55 (1%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
MA S VL+ + +V ++VA AT + VGD +GWT +Y WA K FR GD L
Sbjct: 1 MAVSSAVLV-GLLVVSCAAVAAATRYTVGDGEGWTTGVNYNNWANGKFFRQGDEL 54
>UniRef100_Q7F1H3 Blue copper-binding protein-like [Oryza sativa]
Length = 178
Score = 48.9 bits (115), Expect = 3e-05
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWA-QDKVFRVGD 53
M R++ +L +++ LL + A+AT++ VGD+KGW D DYT W + + F GD
Sbjct: 1 MVCHRMLPLLVVAVALLPAAAVATNYTVGDEKGWNPDVDYTAWVKKHRPFYKGD 54
>UniRef100_Q9LY37 Stellacyanin (Uclacyanin 3)-like protein [Arabidopsis thaliana]
Length = 187
Score = 48.1 bits (113), Expect = 6e-05
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
M S+ +L + +++ A VGD+ GWT+ +YT W +K FRVGD L
Sbjct: 1 MGSTAATALLLLLLLVAVPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTL 55
>UniRef100_Q96403 Stellacyanin [Cucumis sativus]
Length = 182
Score = 47.4 bits (111), Expect = 1e-04
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 1 MASSRVVLILSISMVLLSSVAIA--TDHIVGDDKGWTVDFD---YTQWAQDKVFRVGDNL 55
MA+ V +L + V+ A A T HIVGD+ GW+V Y+QWA K FRVGD+L
Sbjct: 1 MAAGSVAFVLGLIAVVFLHPATAQSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSL 60
>UniRef100_Q8LED5 Blue copper protein, putative [Arabidopsis thaliana]
Length = 172
Score = 47.4 bits (111), Expect = 1e-04
Identities = 20/60 (33%), Positives = 33/60 (54%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLGTMFS 60
M V++IL S +L A+A H++G +GW D+ W+ D+ F+VGD + +S
Sbjct: 1 MKMQAVLVILVFSGLLSVKTALAAQHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYS 60
>UniRef100_Q852J0 Putative blue copper-binding protein [Oryza sativa]
Length = 135
Score = 47.4 bits (111), Expect = 1e-04
Identities = 24/59 (40%), Positives = 34/59 (56%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLGTMF 59
+A+ VV+ +++ L ++ A AT + VGDD GW DY WA K F+VGD L F
Sbjct: 10 LAAVVVVVAAAVAGSLPATTASATAYRVGDDSGWDNGVDYDAWAHGKRFKVGDTLDVEF 68
>UniRef100_Q9ZTU7 Blue copper-binding protein homolog [Triticum aestivum]
Length = 176
Score = 47.4 bits (111), Expect = 1e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLGTMFS 60
MA+ ++ L+ +M L A A + VG+ GWT++ DY+ W K F VGD + +S
Sbjct: 1 MAAMKITLLAVAAMAALLGTASAVTYNVGEQGGWTLNTDYSSWVSGKKFNVGDEIVFKYS 60
>UniRef100_Q9LUM8 Blue copper-binding protein-like [Arabidopsis thaliana]
Length = 129
Score = 47.0 bits (110), Expect = 1e-04
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 3 SSRVVL--ILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
SS ++L I S+S ++L S T+HIVGD GW + +YT W Q + F VGD L
Sbjct: 9 SSLIILYAIFSLSSLMLKSEG--TEHIVGDSNGWELFTNYTNWTQGREFHVGDVL 61
>UniRef100_Q949E8 Uclacyanin 3-like protein [Oryza sativa]
Length = 202
Score = 47.0 bits (110), Expect = 1e-04
Identities = 24/62 (38%), Positives = 35/62 (55%), Gaps = 2/62 (3%)
Query: 1 MASSRVVLILSISMVLLSSVA--IATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLGTM 58
MA + + ++LL++VA A D+ VGD GW+ DY WA+ K F VGD+L
Sbjct: 1 MAGVHGLAAAGLVVLLLAAVAPAFAVDYTVGDTSGWSSGVDYVTWAKSKTFSVGDSLVFQ 60
Query: 59 FS 60
+S
Sbjct: 61 YS 62
>UniRef100_Q8VY59 Blue copper protein, putative [Arabidopsis thaliana]
Length = 174
Score = 46.6 bits (109), Expect = 2e-04
Identities = 20/60 (33%), Positives = 33/60 (54%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLGTMFS 60
M V++IL S +L A+A H++G +GW D+ W+ D+ F+VGD + +S
Sbjct: 1 MKMQAVLVILVFSGLLSVKTALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYS 60
>UniRef100_Q6H8G6 Putative uclacyanin 3 [Oryza sativa]
Length = 202
Score = 46.6 bits (109), Expect = 2e-04
Identities = 24/62 (38%), Positives = 35/62 (55%), Gaps = 2/62 (3%)
Query: 1 MASSRVVLILSISMVLLSSVA--IATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLGTM 58
MA + + ++LL++VA A D+ VGD GW+ DY WA+ K F VGD+L
Sbjct: 1 MAGVHGLAAAGLVVLLLAAVAPAFAVDYTVGDTSGWSSGVDYDTWAKSKTFSVGDSLVFQ 60
Query: 59 FS 60
+S
Sbjct: 61 YS 62
>UniRef100_Q70DK2 Blue copper binding protein [Hordeum vulgare var. distichum]
Length = 177
Score = 46.6 bits (109), Expect = 2e-04
Identities = 22/56 (39%), Positives = 32/56 (56%), Gaps = 1/56 (1%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKG-WTVDFDYTQWAQDKVFRVGDNL 55
MA+ + L+ +M L A A + VG+ G WT+D DY++W DK F VGD +
Sbjct: 1 MAAMKAALLAVAAMAALLGAASAATYTVGEPGGSWTLDTDYSKWVSDKKFNVGDEI 56
>UniRef100_Q9LK33 Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12
[Arabidopsis thaliana]
Length = 169
Score = 46.2 bits (108), Expect = 2e-04
Identities = 19/55 (34%), Positives = 31/55 (55%)
Query: 1 MASSRVVLILSISMVLLSSVAIATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNL 55
M V++IL S +L A+A H++G +GW D+ W+ D+ F+VGD +
Sbjct: 1 MKMQAVLVILVFSGLLSVKTALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQI 55
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.323 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,246,999
Number of Sequences: 2790947
Number of extensions: 2334842
Number of successful extensions: 7874
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 7802
Number of HSP's gapped (non-prelim): 97
length of query: 60
length of database: 848,049,833
effective HSP length: 36
effective length of query: 24
effective length of database: 747,575,741
effective search space: 17941817784
effective search space used: 17941817784
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 68 (30.8 bits)
Medicago: description of AC126009.3